plasma membrane ATPase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G07560 AT3G42640 |
| fragaria_vesca | FvH4_1g01450 FvH4_1g01450 |
| malus_domestica | MD02G1011600.v1.1 |
| prunus_persica | Prupe.7G258000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0086371 |
| rosa_laevigata | RLG00000015753 |
| rosa_multiflora | Rmu_co8318751.1_g000001 Rmu_sc0003572.1_g000001 Rmu_sc0005127.1_g000010 |
| rosa_roxburghii | Rroxscaffold_2G00154660 |
| rosa_rugosa | Rorug01G0466900 Rorug01G0467000 |
| rosa_samantha | Rh2AG017100 Rh2BG016900 Rh2CG017900 Rh2DG018600 |
| rosa_wichuraiana | Rw2G001450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 791 |
| Acc16I | TGCGCA | 1 cut(s) | 2421 |
| AccB1I | GGYRCC | 1 cut(s) | 932 |
| AccI | GTMKAC | 2 cut(s) | 1068, 1372 |
| AccII | CGCG | 2 cut(s) | 500, 1232 |
| AciI | CCGC | 8 cut(s) | 237, 267, 498, 500, 732, 954, 1230, 2666 |
| AclWI | GGATC | 4 cut(s) | 518, 796, 916, 2486 |
| AcoI | YGGCCR | 3 cut(s) | 246, 384, 709 |
| AcsI | RAATTY | 5 cut(s) | 57, 179, 2009, 2225, 2429 |
| AcuI | CTGAAG | 3 cut(s) | 96, 551, 1209 |
| AfaI | GTAC | 2 cut(s) | 697, 2647 |
| AfeI | AGCGCT | 2 cut(s) | 1791, 1897 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1168 |
| AflIII | ACRYGT | 3 cut(s) | 308, 1149, 1599 |
| AgeI | ACCGGT | 1 cut(s) | 554 |
| AgsI | TTSAA | 7 cut(s) | 759, 1107, 1210, 1301, 1625, 1925, 2570 |
| AjiI | CACGTC | 1 cut(s) | 1394 |
| AjnI | CCWGG | 3 cut(s) | 457, 582, 1873 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2095, 2127 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 59, 91, 2663, 2695 |
| Alw21I | GWGCWC | 8 cut(s) | 1285, 1339, 1510, 1668, 1710, 1905, 2709, 2769 |
| Alw26I | GTCTC | 6 cut(s) | 515, 582, 927, 1487, 1562, 1960 |
| Alw44I | GTGCAC | 1 cut(s) | 2765 |
| AlwI | GGATC | 4 cut(s) | 518, 796, 916, 2486 |
| Ama87I | CYCGRG | 3 cut(s) | 96, 1382, 2353 |
| Aor51HI | AGCGCT | 2 cut(s) | 1791, 1897 |
| AoxI | GGCC | 6 cut(s) | 246, 275, 384, 709, 1677, 2779 |
| ApaLI | GTGCAC | 1 cut(s) | 2765 |
| ApeKI | GCWGC | 9 cut(s) | 5, 233, 368, 371, 374, 443, 677, 990, 1838 |
| ApoI | RAATTY | 5 cut(s) | 57, 179, 2009, 2225, 2429 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2073, 2105 |
| AseI | ATTAAT | 1 cut(s) | 2264 |
| AsiGI | ACCGGT | 1 cut(s) | 554 |
| AspLEI | GCGC | 4 cut(s) | 1427, 1792, 1898, 2422 |
| AspS9I | GGNCC | 2 cut(s) | 2032, 2337 |
| AsuC2I | CCSGG | 4 cut(s) | 97, 98, 2354, 2355 |
| AsuHPI | GGTGA | 8 cut(s) | 235, 473, 497, 533, 569, 635, 1169, 1897 |
| AsuII | TTCGAA | 1 cut(s) | 2682 |
| AsuNHI | GCTAGC | 1 cut(s) | 2194 |
| AvaI | CYCGRG | 3 cut(s) | 96, 1382, 2353 |
| AvaII | GGWCC | 2 cut(s) | 2032, 2337 |
| BaeGI | GKGCMC | 1 cut(s) | 2769 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 733, 766 |
| BalI | TGGCCA | 3 cut(s) | 248, 386, 711 |
| BanI | GGYRCC | 1 cut(s) | 932 |
| BanII | GRGCYC | 4 cut(s) | 1510, 1668, 2635, 2709 |
| BbsI | GAAGAC | 3 cut(s) | 102, 2176, 2691 |
| Bbv12I | GWGCWC | 8 cut(s) | 1285, 1339, 1510, 1668, 1710, 1905, 2709, 2769 |
| BbvI | GCAGC | 8 cut(s) | 220, 358, 380, 386, 430, 689, 1002, 1850 |
| BceAI | ACGGC | 1 cut(s) | 2706 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 527, 561 |
| BciT130I | CCWGG | 3 cut(s) | 459, 584, 1875 |
| BciVI | GTATCC | 2 cut(s) | 807, 1614 |
| BclI | TGATCA | 1 cut(s) | 1536 |
| BcnI | CCSGG | 4 cut(s) | 97, 98, 2354, 2355 |
| BcoDI | GTCTC | 6 cut(s) | 515, 582, 927, 1487, 1562, 1960 |
| BfaI | CTAG | 7 cut(s) | 158, 452, 515, 1098, 2195, 2636, 2751 |
| BfmI | CTRYAG | 2 cut(s) | 372, 2482 |
| BfoI | RGCGCY | 3 cut(s) | 1428, 1793, 1899 |
| BfuI | GTATCC | 2 cut(s) | 807, 1614 |
| BlpI | GCTNAGC | 1 cut(s) | 1362 |
| BmcAI | AGTACT | 1 cut(s) | 697 |
| Bme1390I | CCNGG | 7 cut(s) | 97, 98, 459, 584, 1875, 2354, 2355 |
| Bme18I | GGWCC | 2 cut(s) | 2032, 2337 |
| BmeT110I | CYCGRG | 3 cut(s) | 96, 1382, 2353 |
| BmgBI | CACGTC | 1 cut(s) | 1394 |
| BmgT120I | GGNCC | 2 cut(s) | 2032, 2337 |
| BmiI | GGNNCC | 5 cut(s) | 209, 607, 934, 2062, 2158 |
| BmrFI | CCNGG | 7 cut(s) | 97, 98, 459, 584, 1875, 2354, 2355 |
| BmsI | GCATC | 6 cut(s) | 483, 493, 1114, 1771, 1816, 1825 |
| BmtI | GCTAGC | 1 cut(s) | 2198 |
| BpiI | GAAGAC | 3 cut(s) | 102, 2176, 2691 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1040, 1072 |
| BpmI | CTGGAG | 3 cut(s) | 1563, 1713, 2163 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1287, 1704 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1362 |
| Bpu14I | TTCGAA | 1 cut(s) | 2682 |
| BpuEI | CTTGAG | 3 cut(s) | 71, 2501, 2789 |
| BpuMI | CCSGG | 4 cut(s) | 97, 98, 2354, 2355 |
| Bsa29I | ATCGAT | 1 cut(s) | 1245 |
| BsaI | GGTCTC | 1 cut(s) | 1487 |
| BsaJI | CCNNGG | 7 cut(s) | 96, 498, 583, 1436, 1978, 2353, 2653 |
| BsaWI | WCCGGW | 6 cut(s) | 61, 280, 554, 650, 1643, 1763 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1168 |
| Bse118I | RCCGGY | 2 cut(s) | 359, 554 |
| Bse1I | ACTGG | 5 cut(s) | 1006, 1214, 1546, 1908, 2146 |
| Bse3DI | GCAATG | 1 cut(s) | 642 |
| BseBI | CCWGG | 3 cut(s) | 459, 584, 1875 |
| BseCI | ATCGAT | 1 cut(s) | 1245 |
| BseDI | CCNNGG | 7 cut(s) | 96, 498, 583, 1436, 1978, 2353, 2653 |
| BseGI | GGATG | 6 cut(s) | 28, 424, 508, 985, 2459, 2465 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1168 |
| BseMI | GCAATG | 1 cut(s) | 642 |
| BseMII | CTCAG | 6 cut(s) | 1278, 1353, 1398, 1695, 1866, 2703 |
| BseNI | ACTGG | 5 cut(s) | 1006, 1214, 1546, 1908, 2146 |
| BseRI | GAGGAG | 2 cut(s) | 362, 1662 |
| BseSI | GKGCMC | 1 cut(s) | 2769 |
| BseXI | GCAGC | 8 cut(s) | 220, 358, 380, 386, 430, 689, 1002, 1850 |
| BseYI | CCCAGC | 2 cut(s) | 568, 1786 |
| BsgI | GTGCAG | 2 cut(s) | 1509, 2760 |
| Bsh1236I | CGCG | 2 cut(s) | 500, 1232 |
| BshFI | GGCC | 6 cut(s) | 248, 277, 386, 711, 1679, 2781 |
| BshNI | GGYRCC | 1 cut(s) | 932 |
| BshTI | ACCGGT | 1 cut(s) | 554 |
| BshVI | ATCGAT | 1 cut(s) | 1245 |
| BsiHKAI | GWGCWC | 8 cut(s) | 1285, 1339, 1510, 1668, 1710, 1905, 2709, 2769 |
| BsiHKCI | CYCGRG | 3 cut(s) | 96, 1382, 2353 |
| BsiWI | CGTACG | 1 cut(s) | 2645 |
| BslFI | GGGAC | 1 cut(s) | 2370 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1168 |
| BsmAI | GTCTC | 6 cut(s) | 515, 582, 927, 1487, 1562, 1960 |
| BsmBI | CGTCTC | 2 cut(s) | 515, 582 |
| BsmFI | GGGAC | 1 cut(s) | 2370 |
| BsmI | GAATGC | 1 cut(s) | 2582 |
| BsnI | GGCC | 6 cut(s) | 248, 277, 386, 711, 1679, 2781 |
| Bso31I | GGTCTC | 1 cut(s) | 1487 |
| BsoBI | CYCGRG | 3 cut(s) | 96, 1382, 2353 |
| Bsp119I | TTCGAA | 1 cut(s) | 2682 |
| Bsp1286I | GDGCHC | 9 cut(s) | 1285, 1339, 1510, 1668, 1710, 1905, 2635, 2709, 2769 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1362 |
| Bsp19I | CCATGG | 1 cut(s) | 2653 |
| BspACI | CCGC | 8 cut(s) | 237, 267, 498, 500, 732, 954, 1230, 2666 |
| BspANI | GGCC | 6 cut(s) | 248, 277, 386, 711, 1679, 2781 |
| BspCNI | CTCAG | 6 cut(s) | 1279, 1354, 1399, 1696, 1865, 2704 |
| BspDI | ATCGAT | 1 cut(s) | 1245 |
| BspFNI | CGCG | 2 cut(s) | 500, 1232 |
| BspHI | TCATGA | 1 cut(s) | 2067 |
| BspLI | GGNNCC | 5 cut(s) | 209, 607, 934, 2062, 2158 |
| BspMAI | CTGCAG | 1 cut(s) | 376 |
| BspOI | GCTAGC | 1 cut(s) | 2198 |
| BspPI | GGATC | 4 cut(s) | 518, 796, 916, 2486 |
| BspQI | GCTCTTC | 2 cut(s) | 1327, 1498 |
| BspT104I | TTCGAA | 1 cut(s) | 2682 |
| BspT107I | GGYRCC | 1 cut(s) | 932 |
| BspTNI | GGTCTC | 1 cut(s) | 1487 |
| BsrDI | GCAATG | 1 cut(s) | 642 |
| BsrFI | RCCGGY | 2 cut(s) | 359, 554 |
| BsrI | ACTGG | 5 cut(s) | 1006, 1214, 1546, 1908, 2146 |
| BssAI | RCCGGY | 2 cut(s) | 359, 554 |
| BssECI | CCNNGG | 7 cut(s) | 96, 498, 583, 1436, 1978, 2353, 2653 |
| BssT1I | CCWWGG | 1 cut(s) | 2653 |
| Bst2UI | CCWGG | 3 cut(s) | 459, 584, 1875 |
| Bst4CI | ACNGT | 8 cut(s) | 883, 1030, 1437, 1487, 2179, 2486, 2606, 2845 |
| Bst6I | CTCTTC | 4 cut(s) | 156, 1327, 1498, 1618 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 1201, 1835, 1847, 2747 |
| BstBI | TTCGAA | 1 cut(s) | 2682 |
| BstC8I | GCNNGC | 1 cut(s) | 2196 |
| BstDSI | CCRYGG | 3 cut(s) | 498, 1436, 2653 |
| BstEII | GGTNACC | 1 cut(s) | 1157 |
| BstF5I | GGATG | 6 cut(s) | 28, 424, 508, 985, 2459, 2465 |
| BstFNI | CGCG | 2 cut(s) | 500, 1232 |
| BstH2I | RGCGCY | 3 cut(s) | 1428, 1793, 1899 |
| BstHHI | GCGC | 4 cut(s) | 1427, 1792, 1898, 2422 |
| BstMAI | GTCTC | 6 cut(s) | 515, 582, 927, 1487, 1562, 1960 |
| BstNI | CCWGG | 3 cut(s) | 459, 584, 1875 |
| BstNSI | RCATGY | 3 cut(s) | 312, 1153, 1603 |
| BstPI | GGTNACC | 1 cut(s) | 1157 |
| BstSCI | CCNGG | 7 cut(s) | 95, 96, 457, 582, 1873, 2352, 2353 |
| BstSFI | CTRYAG | 2 cut(s) | 372, 2482 |
| BstSLI | GKGCMC | 1 cut(s) | 2769 |
| BstUI | CGCG | 2 cut(s) | 500, 1232 |
| BstV1I | GCAGC | 8 cut(s) | 220, 358, 380, 386, 430, 689, 1002, 1850 |
| BstV2I | GAAGAC | 3 cut(s) | 102, 2176, 2691 |
| BstX2I | RGATCY | 1 cut(s) | 2478 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 256, 285 |
| BstYI | RGATCY | 1 cut(s) | 2478 |
| Bsu15I | ATCGAT | 1 cut(s) | 1245 |
| BsuI | GTATCC | 2 cut(s) | 807, 1614 |
| BsuRI | GGCC | 6 cut(s) | 248, 277, 386, 711, 1679, 2781 |
| BsuTUI | ATCGAT | 1 cut(s) | 1245 |
| BtgI | CCRYGG | 3 cut(s) | 498, 1436, 2653 |
| BtrI | CACGTC | 1 cut(s) | 1394 |
| BtsCI | GGATG | 6 cut(s) | 28, 424, 508, 985, 2459, 2465 |
| BtsIMutI | CAGTG | 4 cut(s) | 879, 1492, 1539, 2175 |
| Cac8I | GCNNGC | 1 cut(s) | 2196 |
| CciI | TCATGA | 1 cut(s) | 2067 |
| CfoI | GCGC | 4 cut(s) | 1427, 1792, 1898, 2422 |
| Cfr10I | RCCGGY | 2 cut(s) | 359, 554 |
| Cfr13I | GGNCC | 2 cut(s) | 2032, 2337 |
| Cfr42I | CCGCGG | 1 cut(s) | 501 |
| Cfr9I | CCCGGG | 2 cut(s) | 96, 2353 |
| ClaI | ATCGAT | 1 cut(s) | 1245 |
| Csp6I | GTAC | 2 cut(s) | 696, 2646 |
| CspAI | ACCGGT | 1 cut(s) | 554 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2431, 2466 |
| CviQI | GTAC | 2 cut(s) | 696, 2646 |
| EaeI | YGGCCR | 3 cut(s) | 246, 384, 709 |
| Eam1104I | CTCTTC | 4 cut(s) | 156, 1327, 1498, 1618 |
| EarI | CTCTTC | 4 cut(s) | 156, 1327, 1498, 1618 |
| Ecl136II | GAGCTC | 3 cut(s) | 1508, 1666, 2707 |
| Eco130I | CCWWGG | 1 cut(s) | 2653 |
| Eco24I | GRGCYC | 4 cut(s) | 1510, 1668, 2635, 2709 |
| Eco31I | GGTCTC | 1 cut(s) | 1487 |
| Eco32I | GATATC | 2 cut(s) | 13, 2512 |
| Eco47I | GGWCC | 2 cut(s) | 2032, 2337 |
| Eco47III | AGCGCT | 2 cut(s) | 1791, 1897 |
| Eco53kI | GAGCTC | 3 cut(s) | 1508, 1666, 2707 |
| Eco57I | CTGAAG | 3 cut(s) | 96, 551, 1209 |
| Eco88I | CYCGRG | 3 cut(s) | 96, 1382, 2353 |
| Eco91I | GGTNACC | 1 cut(s) | 1157 |
| EcoICRI | GAGCTC | 3 cut(s) | 1508, 1666, 2707 |
| EcoO65I | GGTNACC | 1 cut(s) | 1157 |
| EcoRII | CCWGG | 3 cut(s) | 457, 582, 1873 |
| EcoRV | GATATC | 2 cut(s) | 13, 2512 |
| EcoT14I | CCWWGG | 1 cut(s) | 2653 |
| EcoT38I | GRGCYC | 4 cut(s) | 1510, 1668, 2635, 2709 |
| ErhI | CCWWGG | 1 cut(s) | 2653 |
| Esp3I | CGTCTC | 2 cut(s) | 515, 582 |
| FaqI | GGGAC | 1 cut(s) | 2370 |
| FauI | CCCGC | 1 cut(s) | 505 |
| FbaI | TGATCA | 1 cut(s) | 1536 |
| FblI | GTMKAC | 2 cut(s) | 1068, 1372 |
| FokI | GGATG | 6 cut(s) | 35, 431, 515, 992, 2466, 2472 |
| FriOI | GRGCYC | 4 cut(s) | 1510, 1668, 2635, 2709 |
| FspAI | RTGCGCAY | 1 cut(s) | 2421 |
| FspBI | CTAG | 7 cut(s) | 158, 452, 515, 1098, 2195, 2636, 2751 |
| FspI | TGCGCA | 1 cut(s) | 2421 |
| GlaI | GCGC | 4 cut(s) | 1426, 1791, 1897, 2421 |
| GsaI | CCCAGC | 2 cut(s) | 572, 1790 |
| GsuI | CTGGAG | 3 cut(s) | 1563, 1713, 2163 |
| HaeII | RGCGCY | 3 cut(s) | 1428, 1793, 1899 |
| HaeIII | GGCC | 6 cut(s) | 248, 277, 386, 711, 1679, 2781 |
| HhaI | GCGC | 4 cut(s) | 1427, 1792, 1898, 2422 |
| Hin6I | GCGC | 4 cut(s) | 1425, 1790, 1896, 2420 |
| HinP1I | GCGC | 4 cut(s) | 1425, 1790, 1896, 2420 |
| HincII | GTYRAC | 3 cut(s) | 1033, 1147, 1777 |
| HindII | GTYRAC | 3 cut(s) | 1033, 1147, 1777 |
| HindIII | AAGCTT | 2 cut(s) | 2120, 2550 |
| HpaI | GTTAAC | 1 cut(s) | 1147 |
| HphI | GGTGA | 8 cut(s) | 235, 473, 497, 533, 569, 635, 1169, 1897 |
| Hpy166II | GTNNAC | 9 cut(s) | 67, 617, 1033, 1069, 1147, 1373, 1379, 1777, 2767 |
| Hpy188I | TCNGA | 8 cut(s) | 115, 531, 764, 801, 1398, 1855, 2221, 2713 |
| Hpy8I | GTNNAC | 9 cut(s) | 67, 617, 1033, 1069, 1147, 1373, 1379, 1777, 2767 |
| Hpy99I | CGWCG | 1 cut(s) | 2060 |
| HpyCH4III | ACNGT | 8 cut(s) | 883, 1030, 1437, 1487, 2179, 2486, 2606, 2845 |
| HpyCH4IV | ACGT | 6 cut(s) | 1065, 1375, 1393, 2644, 2737, 2784 |
| HpySE526I | ACGT | 6 cut(s) | 1065, 1375, 1393, 2644, 2737, 2784 |
| HspAI | GCGC | 4 cut(s) | 1425, 1790, 1896, 2420 |
| Ksp22I | TGATCA | 1 cut(s) | 1536 |
| KspAI | GTTAAC | 1 cut(s) | 1147 |
| KspI | CCGCGG | 1 cut(s) | 501 |
| LguI | GCTCTTC | 2 cut(s) | 1327, 1498 |
| LmnI | GCTCC | 4 cut(s) | 611, 1288, 2331, 2655 |
| Lsp1109I | GCAGC | 8 cut(s) | 220, 358, 380, 386, 430, 689, 1002, 1850 |
| LweI | GCATC | 6 cut(s) | 483, 493, 1114, 1771, 1816, 1825 |
| MaeI | CTAG | 7 cut(s) | 158, 452, 515, 1098, 2195, 2636, 2751 |
| MaeII | ACGT | 6 cut(s) | 1065, 1375, 1393, 2644, 2737, 2784 |
| MaeIII | GTNAC | 9 cut(s) | 461, 485, 740, 892, 1157, 2173, 2241, 2317, 2491 |
| MfeI | CAATTG | 2 cut(s) | 1550, 2390 |
| MflI | RGATCY | 1 cut(s) | 2478 |
| MhlI | GDGCHC | 9 cut(s) | 1285, 1339, 1510, 1668, 1710, 1905, 2635, 2709, 2769 |
| MlsI | TGGCCA | 3 cut(s) | 248, 386, 711 |
| MluNI | TGGCCA | 3 cut(s) | 248, 386, 711 |
| MlyI | GAGTC | 5 cut(s) | 1704, 2097, 2478, 2681, 2798 |
| MmeI | TCCRAC | 3 cut(s) | 103, 280, 829 |
| Mox20I | TGGCCA | 3 cut(s) | 248, 386, 711 |
| MscI | TGGCCA | 3 cut(s) | 248, 386, 711 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1485, 1713, 1991 |
| Msp20I | TGGCCA | 3 cut(s) | 248, 386, 711 |
| MspA1I | CMGCKG | 3 cut(s) | 85, 371, 500 |
| MspR9I | CCNGG | 7 cut(s) | 97, 98, 459, 584, 1875, 2354, 2355 |
| MunI | CAATTG | 2 cut(s) | 1550, 2390 |
| Mva1269I | GAATGC | 1 cut(s) | 2582 |
| MvaI | CCWGG | 3 cut(s) | 459, 584, 1875 |
| MvnI | CGCG | 2 cut(s) | 500, 1232 |
| NciI | CCSGG | 4 cut(s) | 97, 98, 2354, 2355 |
| NcoI | CCATGG | 1 cut(s) | 2653 |
| NheI | GCTAGC | 1 cut(s) | 2194 |
| NlaIV | GGNNCC | 5 cut(s) | 209, 607, 934, 2062, 2158 |
| NmeAIII | GCCGAG | 1 cut(s) | 1959 |
| NmuCI | GTSAC | 7 cut(s) | 461, 485, 892, 1157, 2173, 2317, 2491 |
| NsbI | TGCGCA | 1 cut(s) | 2421 |
| NspI | RCATGY | 3 cut(s) | 312, 1153, 1603 |
| NspV | TTCGAA | 1 cut(s) | 2682 |
| PagI | TCATGA | 1 cut(s) | 2067 |
| PciI | ACATGT | 3 cut(s) | 308, 1149, 1599 |
| PciSI | GCTCTTC | 2 cut(s) | 1327, 1498 |
| PctI | GAATGC | 1 cut(s) | 2582 |
| PfeI | GAWTC | 8 cut(s) | 303, 448, 560, 828, 861, 1686, 2111, 2439 |
| Pfl23II | CGTACG | 1 cut(s) | 2645 |
| PinAI | ACCGGT | 1 cut(s) | 554 |
| PleI | GAGTC | 5 cut(s) | 1703, 2096, 2477, 2680, 2797 |
| PpsI | GAGTC | 5 cut(s) | 1703, 2096, 2477, 2680, 2797 |
| PscI | ACATGT | 3 cut(s) | 308, 1149, 1599 |
| PshBI | ATTAAT | 1 cut(s) | 2264 |
| PsiI | TTATAA | 1 cut(s) | 791 |
| Psp124BI | GAGCTC | 3 cut(s) | 1510, 1668, 2709 |
| Psp6I | CCWGG | 3 cut(s) | 457, 582, 1873 |
| PspEI | GGTNACC | 1 cut(s) | 1157 |
| PspFI | CCCAGC | 2 cut(s) | 568, 1786 |
| PspGI | CCWGG | 3 cut(s) | 457, 582, 1873 |
| PspLI | CGTACG | 1 cut(s) | 2645 |
| PspN4I | GGNNCC | 5 cut(s) | 209, 607, 934, 2062, 2158 |
| PspPI | GGNCC | 2 cut(s) | 2032, 2337 |
| PstI | CTGCAG | 1 cut(s) | 376 |
| PsuI | RGATCY | 1 cut(s) | 2478 |
| PvuII | CAGCTG | 2 cut(s) | 85, 371 |
| RsaI | GTAC | 2 cut(s) | 697, 2647 |
| RsaNI | GTAC | 2 cut(s) | 696, 2646 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1485, 1713, 1991 |
| SacI | GAGCTC | 3 cut(s) | 1510, 1668, 2709 |
| SacII | CCGCGG | 1 cut(s) | 501 |
| SapI | GCTCTTC | 2 cut(s) | 1327, 1498 |
| Sau96I | GGNCC | 2 cut(s) | 2032, 2337 |
| ScaI | AGTACT | 1 cut(s) | 697 |
| SchI | GAGTC | 5 cut(s) | 1704, 2097, 2478, 2681, 2798 |
| ScrFI | CCNGG | 7 cut(s) | 97, 98, 459, 584, 1875, 2354, 2355 |
| SduI | GDGCHC | 9 cut(s) | 1285, 1339, 1510, 1668, 1710, 1905, 2635, 2709, 2769 |
| SfaNI | GCATC | 6 cut(s) | 483, 493, 1114, 1771, 1816, 1825 |
| SfcI | CTRYAG | 2 cut(s) | 372, 2482 |
| Sfr303I | CCGCGG | 1 cut(s) | 501 |
| SfuI | TTCGAA | 1 cut(s) | 2682 |
| SgrBI | CCGCGG | 1 cut(s) | 501 |
| SinI | GGWCC | 2 cut(s) | 2032, 2337 |
| SmaI | CCCGGG | 2 cut(s) | 98, 2355 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1485, 1713, 1991 |
| SmlI | CTYRAG | 3 cut(s) | 50, 2516, 2804 |
| SmoI | CTYRAG | 3 cut(s) | 50, 2516, 2804 |
| SsiI | CCGC | 8 cut(s) | 237, 267, 498, 500, 732, 954, 1230, 2666 |
| SspI | AATATT | 1 cut(s) | 141 |
| SspMI | CTAG | 7 cut(s) | 158, 452, 515, 1098, 2195, 2636, 2751 |
| SstI | GAGCTC | 3 cut(s) | 1510, 1668, 2709 |
| StyD4I | CCNGG | 7 cut(s) | 95, 96, 457, 582, 1873, 2352, 2353 |
| StyI | CCWWGG | 1 cut(s) | 2653 |
| TaaI | ACNGT | 8 cut(s) | 883, 1030, 1437, 1487, 2179, 2486, 2606, 2845 |
| TaiI | ACGT | 6 cut(s) | 1068, 1378, 1396, 2647, 2740, 2787 |
| TatI | WGTACW | 1 cut(s) | 695 |
| TauI | GCSGC | 1 cut(s) | 239 |
| TfiI | GAWTC | 8 cut(s) | 303, 448, 560, 828, 861, 1686, 2111, 2439 |
| TscAI | CASTG | 4 cut(s) | 886, 1492, 1546, 2182 |
| TseFI | GTSAC | 7 cut(s) | 461, 485, 892, 1157, 2173, 2317, 2491 |
| TseI | GCWGC | 9 cut(s) | 5, 233, 368, 371, 374, 443, 677, 990, 1838 |
| Tsp45I | GTSAC | 7 cut(s) | 461, 485, 892, 1157, 2173, 2317, 2491 |
| TspDTI | ATGAA | 7 cut(s) | 39, 207, 331, 1946, 1975, 2017, 2103 |
| TspGWI | ACGGA | 2 cut(s) | 1958, 2073 |
| TspMI | CCCGGG | 2 cut(s) | 96, 2353 |
| TspRI | CASTG | 4 cut(s) | 886, 1492, 1546, 2182 |
| VneI | GTGCAC | 1 cut(s) | 2765 |
| VpaK11BI | GGWCC | 2 cut(s) | 2032, 2337 |
| VspI | ATTAAT | 1 cut(s) | 2264 |
| XapI | RAATTY | 5 cut(s) | 57, 179, 2009, 2225, 2429 |
| XceI | RCATGY | 3 cut(s) | 312, 1153, 1603 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 964 |
| XmaI | CCCGGG | 2 cut(s) | 96, 2353 |
| XmiI | GTMKAC | 2 cut(s) | 1068, 1372 |
| XspI | CTAG | 7 cut(s) | 158, 452, 515, 1098, 2195, 2636, 2751 |
| ZrmI | AGTACT | 1 cut(s) | 697 |