ATPase 8, plasma
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G07560 AT3G42640 |
| fragaria_vesca | FvH4_1g01450 FvH4_1g01450 |
| malus_domestica | MD02G1011600.v1.1 |
| prunus_persica | Prupe.7G258000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0086371 |
| rosa_laevigata | RLG00000015753 |
| rosa_multiflora | Rmu_co8318751.1_g000001 Rmu_sc0003572.1_g000001 Rmu_sc0005127.1_g000010 |
| rosa_roxburghii | Rroxscaffold_2G00154660 |
| rosa_rugosa | Rorug01G0466900 Rorug01G0467000 |
| rosa_samantha | Rh2AG017100 Rh2BG016900 Rh2CG017900 Rh2DG018600 |
| rosa_wichuraiana | Rw2G001450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2456 |
| Acc36I | ACCTGC | 1 cut(s) | 2456 |
| Acc65I | GGTACC | 2 cut(s) | 451, 2156 |
| AccB1I | GGYRCC | 6 cut(s) | 451, 929, 1001, 1260, 2156, 2372 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 685 |
| AccI | GTMKAC | 1 cut(s) | 2481 |
| AciI | CCGC | 6 cut(s) | 127, 366, 913, 1498, 2384, 2530 |
| AclI | AACGTT | 2 cut(s) | 39, 2644 |
| AclWI | GGATC | 1 cut(s) | 515 |
| AcoI | YGGCCR | 3 cut(s) | 3, 284, 2397 |
| AcuI | CTGAAG | 2 cut(s) | 1814, 2819 |
| AdeI | CACNNNGTG | 1 cut(s) | 685 |
| AfaI | GTAC | 5 cut(s) | 453, 794, 1591, 2158, 2417 |
| AfeI | AGCGCT | 2 cut(s) | 1423, 2307 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 64, 253, 685, 1165, 1507, 2115 |
| AflIII | ACRYGT | 1 cut(s) | 1596 |
| AgeI | ACCGGT | 3 cut(s) | 551, 1263, 1538 |
| AleI | CACNNNNGTG | 2 cut(s) | 1187, 1752 |
| Alw21I | GWGCWC | 3 cut(s) | 1282, 1668, 2238 |
| Alw26I | GTCTC | 3 cut(s) | 912, 1484, 1559 |
| Alw44I | GTGCAC | 1 cut(s) | 2234 |
| AlwI | GGATC | 1 cut(s) | 515 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1823, 2553 |
| Ama87I | CYCGRG | 1 cut(s) | 1095 |
| Aor51HI | AGCGCT | 2 cut(s) | 1423, 2307 |
| ApaLI | GTGCAC | 1 cut(s) | 2234 |
| ApeKI | GCWGC | 8 cut(s) | 130, 233, 368, 371, 542, 674, 1269, 1838 |
| AsiGI | ACCGGT | 3 cut(s) | 551, 1263, 1538 |
| Asp718I | GGTACC | 2 cut(s) | 451, 2156 |
| AspLEI | GCGC | 3 cut(s) | 1224, 1424, 2308 |
| AspS9I | GGNCC | 8 cut(s) | 118, 143, 244, 1333, 1914, 2337, 2550, 2631 |
| AsuC2I | CCSGG | 3 cut(s) | 1096, 1097, 1502 |
| AsuII | TTCGAA | 1 cut(s) | 75 |
| AsuNHI | GCTAGC | 1 cut(s) | 2710 |
| AvaI | CYCGRG | 1 cut(s) | 1095 |
| AvaII | GGWCC | 1 cut(s) | 2337 |
| BaeGI | GKGCMC | 2 cut(s) | 2238, 2778 |
| BalI | TGGCCA | 2 cut(s) | 5, 2399 |
| BanI | GGYRCC | 6 cut(s) | 451, 929, 1001, 1260, 2156, 2372 |
| BanII | GRGCYC | 2 cut(s) | 1507, 1668 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1716, 1748 |
| BbsI | GAAGAC | 3 cut(s) | 1361, 1415, 2176 |
| Bbv12I | GWGCWC | 3 cut(s) | 1282, 1668, 2238 |
| BbvCI | CCTCAGC | 2 cut(s) | 2635, 2750 |
| BbvI | GCAGC | 8 cut(s) | 117, 220, 380, 383, 529, 661, 1281, 1850 |
| BceAI | ACGGC | 1 cut(s) | 2396 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1625, 1659 |
| BciVI | GTATCC | 2 cut(s) | 869, 1611 |
| BclI | TGATCA | 3 cut(s) | 315, 465, 1533 |
| BcnI | CCSGG | 3 cut(s) | 1096, 1097, 1502 |
| BcoDI | GTCTC | 3 cut(s) | 912, 1484, 1559 |
| BfaI | CTAG | 5 cut(s) | 384, 389, 1842, 2711, 2807 |
| BfmI | CTRYAG | 3 cut(s) | 131, 2419, 2482 |
| BfoI | RGCGCY | 2 cut(s) | 1425, 2309 |
| BfuAI | ACCTGC | 1 cut(s) | 2456 |
| BfuI | GTATCC | 2 cut(s) | 869, 1611 |
| BglII | AGATCT | 2 cut(s) | 135, 2130 |
| BlpI | GCTNAGC | 2 cut(s) | 1359, 2715 |
| Bme18I | GGWCC | 1 cut(s) | 2337 |
| BmeT110I | CYCGRG | 1 cut(s) | 1095 |
| BmgT120I | GGNCC | 8 cut(s) | 118, 143, 244, 1333, 1914, 2337, 2550, 2631 |
| BmiI | GGNNCC | 6 cut(s) | 453, 931, 1003, 1262, 2158, 2374 |
| BmsI | GCATC | 9 cut(s) | 480, 490, 1111, 1120, 1420, 1771, 1816, 1825, 2301 |
| BmtI | GCTAGC | 1 cut(s) | 2714 |
| BoxI | GACNNNNGTC | 3 cut(s) | 404, 1035, 2180 |
| BpiI | GAAGAC | 3 cut(s) | 1361, 1415, 2176 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 510, 542, 581, 613 |
| BpmI | CTGGAG | 5 cut(s) | 1713, 1785, 2163, 2645, 2652 |
| Bpu10I | CCTNAGC | 4 cut(s) | 1284, 1704, 2635, 2750 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1359, 2715 |
| Bpu14I | TTCGAA | 1 cut(s) | 75 |
| BpuEI | CTTGAG | 7 cut(s) | 68, 167, 176, 430, 512, 1295, 2108 |
| BpuMI | CCSGG | 3 cut(s) | 1096, 1097, 1502 |
| BsaBI | GATNNNNATC | 2 cut(s) | 470, 779 |
| BsaI | GGTCTC | 1 cut(s) | 912 |
| BsaWI | WCCGGW | 3 cut(s) | 551, 1263, 1538 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 474, 504, 576, 606, 1758, 1788 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 64, 253, 685, 1165, 1507, 2115 |
| Bse118I | RCCGGY | 4 cut(s) | 551, 998, 1263, 1538 |
| Bse1I | ACTGG | 7 cut(s) | 287, 652, 1262, 1573, 1768, 2146, 2548 |
| Bse3DI | GCAATG | 8 cut(s) | 367, 756, 864, 1255, 1641, 1812, 2040, 2406 |
| Bse8I | GATNNNNATC | 2 cut(s) | 470, 779 |
| BseJI | GATNNNNATC | 2 cut(s) | 470, 779 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 64, 253, 685, 1165, 1507, 2115 |
| BseMI | GCAATG | 8 cut(s) | 367, 756, 864, 1255, 1641, 1812, 2040, 2406 |
| BseNI | ACTGG | 7 cut(s) | 287, 652, 1262, 1573, 1768, 2146, 2548 |
| BseRI | GAGGAG | 3 cut(s) | 128, 170, 173 |
| BseSI | GKGCMC | 2 cut(s) | 2238, 2778 |
| BseXI | GCAGC | 8 cut(s) | 117, 220, 380, 383, 529, 661, 1281, 1850 |
| BseYI | CCCAGC | 3 cut(s) | 493, 1786, 1978 |
| BsgI | GTGCAG | 3 cut(s) | 1288, 1917, 2754 |
| BshNI | GGYRCC | 6 cut(s) | 451, 929, 1001, 1260, 2156, 2372 |
| BshTI | ACCGGT | 3 cut(s) | 551, 1263, 1538 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1282, 1668, 2238 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1095 |
| BsiSI | CCGG | 7 cut(s) | 287, 552, 999, 1096, 1264, 1501, 1539 |
| BslFI | GGGAC | 5 cut(s) | 476, 544, 1461, 2074, 2817 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 64, 253, 685, 1165, 1507, 2115 |
| BsmAI | GTCTC | 3 cut(s) | 912, 1484, 1559 |
| BsmFI | GGGAC | 5 cut(s) | 476, 544, 1461, 2074, 2817 |
| Bso31I | GGTCTC | 1 cut(s) | 912 |
| BsoBI | CYCGRG | 1 cut(s) | 1095 |
| Bsp119I | TTCGAA | 1 cut(s) | 75 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1282, 1507, 1668, 2238, 2778 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1359, 2715 |
| Bsp19I | CCATGG | 1 cut(s) | 894 |
| BspACI | CCGC | 6 cut(s) | 127, 366, 913, 1498, 2384, 2530 |
| BspHI | TCATGA | 2 cut(s) | 2067, 2172 |
| BspLI | GGNNCC | 6 cut(s) | 453, 931, 1003, 1262, 2158, 2374 |
| BspMAI | CTGCAG | 1 cut(s) | 135 |
| BspMI | ACCTGC | 1 cut(s) | 2456 |
| BspOI | GCTAGC | 1 cut(s) | 2714 |
| BspPI | GGATC | 1 cut(s) | 515 |
| BspT104I | TTCGAA | 1 cut(s) | 75 |
| BspT107I | GGYRCC | 6 cut(s) | 451, 929, 1001, 1260, 2156, 2372 |
| BspTNI | GGTCTC | 1 cut(s) | 912 |
| BsrDI | GCAATG | 8 cut(s) | 367, 756, 864, 1255, 1641, 1812, 2040, 2406 |
| BsrFI | RCCGGY | 4 cut(s) | 551, 998, 1263, 1538 |
| BsrI | ACTGG | 7 cut(s) | 287, 652, 1262, 1573, 1768, 2146, 2548 |
| BssAI | RCCGGY | 4 cut(s) | 551, 998, 1263, 1538 |
| BssT1I | CCWWGG | 5 cut(s) | 894, 1161, 1413, 1472, 2152 |
| Bst4CI | ACNGT | 9 cut(s) | 880, 1078, 1399, 1452, 1484, 2179, 2391, 2420, 2839 |
| Bst6I | CTCTTC | 1 cut(s) | 954 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1198, 1835 |
| BstBI | TTCGAA | 1 cut(s) | 75 |
| BstC8I | GCNNGC | 9 cut(s) | 272, 358, 1426, 1577, 2196, 2234, 2712, 2721, 2733 |
| BstDSI | CCRYGG | 1 cut(s) | 894 |
| BstEII | GGTNACC | 1 cut(s) | 1541 |
| BstH2I | RGCGCY | 2 cut(s) | 1425, 2309 |
| BstHHI | GCGC | 3 cut(s) | 1224, 1424, 2308 |
| BstMAI | GTCTC | 3 cut(s) | 912, 1484, 1559 |
| BstNSI | RCATGY | 1 cut(s) | 1600 |
| BstPAI | GACNNNNGTC | 3 cut(s) | 404, 1035, 2180 |
| BstPI | GGTNACC | 1 cut(s) | 1541 |
| BstSFI | CTRYAG | 3 cut(s) | 131, 2419, 2482 |
| BstSLI | GKGCMC | 2 cut(s) | 2238, 2778 |
| BstV1I | GCAGC | 8 cut(s) | 117, 220, 380, 383, 529, 661, 1281, 1850 |
| BstV2I | GAAGAC | 3 cut(s) | 1361, 1415, 2176 |
| BstX2I | RGATCY | 3 cut(s) | 135, 520, 2130 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 282, 763, 1063, 1657 |
| BstYI | RGATCY | 3 cut(s) | 135, 520, 2130 |
| BsuI | GTATCC | 2 cut(s) | 869, 1611 |
| BtgI | CCRYGG | 1 cut(s) | 894 |
| BtgZI | GCGATG | 2 cut(s) | 1443, 2473 |
| BtsI | GCAGTG | 2 cut(s) | 994, 1824 |
| BtsIMutI | CAGTG | 9 cut(s) | 645, 994, 1182, 1489, 1790, 1824, 2139, 2793, 2835 |
| BveI | ACCTGC | 1 cut(s) | 2456 |
| Cac8I | GCNNGC | 9 cut(s) | 272, 358, 1426, 1577, 2196, 2234, 2712, 2721, 2733 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1823, 2553 |
| CciI | TCATGA | 2 cut(s) | 2067, 2172 |
| CfoI | GCGC | 3 cut(s) | 1224, 1424, 2308 |
| Cfr10I | RCCGGY | 4 cut(s) | 551, 998, 1263, 1538 |
| Cfr13I | GGNCC | 8 cut(s) | 118, 143, 244, 1333, 1914, 2337, 2550, 2631 |
| Cfr9I | CCCGGG | 1 cut(s) | 1095 |
| Csp6I | GTAC | 5 cut(s) | 452, 793, 1590, 2157, 2416 |
| CspAI | ACCGGT | 3 cut(s) | 551, 1263, 1538 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2128, 2163, 2389, 2424 |
| CviQI | GTAC | 5 cut(s) | 452, 793, 1590, 2157, 2416 |
| DraIII | CACNNNGTG | 1 cut(s) | 685 |
| EaeI | YGGCCR | 3 cut(s) | 3, 284, 2397 |
| Eam1104I | CTCTTC | 1 cut(s) | 954 |
| EarI | CTCTTC | 1 cut(s) | 954 |
| EciI | GGCGGA | 1 cut(s) | 1487 |
| Ecl136II | GAGCTC | 1 cut(s) | 1666 |
| Eco130I | CCWWGG | 5 cut(s) | 894, 1161, 1413, 1472, 2152 |
| Eco24I | GRGCYC | 2 cut(s) | 1507, 1668 |
| Eco31I | GGTCTC | 1 cut(s) | 912 |
| Eco32I | GATATC | 2 cut(s) | 487, 2512 |
| Eco47I | GGWCC | 1 cut(s) | 2337 |
| Eco47III | AGCGCT | 2 cut(s) | 1423, 2307 |
| Eco53kI | GAGCTC | 1 cut(s) | 1666 |
| Eco57I | CTGAAG | 2 cut(s) | 1814, 2819 |
| Eco88I | CYCGRG | 1 cut(s) | 1095 |
| Eco91I | GGTNACC | 1 cut(s) | 1541 |
| EcoICRI | GAGCTC | 1 cut(s) | 1666 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2550 |
| EcoO65I | GGTNACC | 1 cut(s) | 1541 |
| EcoRV | GATATC | 2 cut(s) | 487, 2512 |
| EcoT14I | CCWWGG | 5 cut(s) | 894, 1161, 1413, 1472, 2152 |
| EcoT22I | ATGCAT | 2 cut(s) | 1435, 2539 |
| EcoT38I | GRGCYC | 2 cut(s) | 1507, 1668 |
| ErhI | CCWWGG | 5 cut(s) | 894, 1161, 1413, 1472, 2152 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2117, 2149 |
| FaqI | GGGAC | 5 cut(s) | 476, 544, 1461, 2074, 2817 |
| FbaI | TGATCA | 3 cut(s) | 315, 465, 1533 |
| FblI | GTMKAC | 1 cut(s) | 2481 |
| FriOI | GRGCYC | 2 cut(s) | 1507, 1668 |
| FspBI | CTAG | 5 cut(s) | 384, 389, 1842, 2711, 2807 |
| GlaI | GCGC | 3 cut(s) | 1223, 1423, 2307 |
| GsaI | CCCAGC | 3 cut(s) | 497, 1790, 1982 |
| GsuI | CTGGAG | 5 cut(s) | 1713, 1785, 2163, 2645, 2652 |
| HaeII | RGCGCY | 2 cut(s) | 1425, 2309 |
| HapII | CCGG | 7 cut(s) | 287, 552, 999, 1096, 1264, 1501, 1539 |
| HhaI | GCGC | 3 cut(s) | 1224, 1424, 2308 |
| Hin6I | GCGC | 3 cut(s) | 1222, 1422, 2306 |
| HinP1I | GCGC | 3 cut(s) | 1222, 1422, 2306 |
| HincII | GTYRAC | 3 cut(s) | 43, 726, 1030 |
| HindII | GTYRAC | 3 cut(s) | 43, 726, 1030 |
| HindIII | AAGCTT | 3 cut(s) | 152, 1019, 1730 |
| HpaII | CCGG | 7 cut(s) | 287, 552, 999, 1096, 1264, 1501, 1539 |
| Hpy166II | GTNNAC | 9 cut(s) | 43, 726, 1030, 1216, 2236, 2416, 2482, 2586, 2648 |
| Hpy188I | TCNGA | 9 cut(s) | 112, 378, 849, 1041, 1405, 1855, 1866, 1970, 2707 |
| Hpy8I | GTNNAC | 9 cut(s) | 43, 726, 1030, 1216, 2236, 2416, 2482, 2586, 2648 |
| Hpy99I | CGWCG | 2 cut(s) | 65, 299 |
| HpyCH4III | ACNGT | 9 cut(s) | 880, 1078, 1399, 1452, 1484, 2179, 2391, 2420, 2839 |
| HpyCH4IV | ACGT | 4 cut(s) | 39, 1239, 2644, 2778 |
| HpySE526I | ACGT | 4 cut(s) | 39, 1239, 2644, 2778 |
| HspAI | GCGC | 3 cut(s) | 1222, 1422, 2306 |
| KpnI | GGTACC | 2 cut(s) | 455, 2160 |
| Ksp22I | TGATCA | 3 cut(s) | 315, 465, 1533 |
| LmnI | GCTCC | 5 cut(s) | 183, 758, 1285, 2331, 2698 |
| Lsp1109I | GCAGC | 8 cut(s) | 117, 220, 380, 383, 529, 661, 1281, 1850 |
| LweI | GCATC | 9 cut(s) | 480, 490, 1111, 1120, 1420, 1771, 1816, 1825, 2301 |
| MaeI | CTAG | 5 cut(s) | 384, 389, 1842, 2711, 2807 |
| MaeII | ACGT | 4 cut(s) | 39, 1239, 2644, 2778 |
| MaeIII | GTNAC | 6 cut(s) | 568, 737, 889, 918, 1541, 2317 |
| MfeI | CAATTG | 1 cut(s) | 1137 |
| MflI | RGATCY | 3 cut(s) | 135, 520, 2130 |
| MhlI | GDGCHC | 5 cut(s) | 1282, 1507, 1668, 2238, 2778 |
| MlsI | TGGCCA | 2 cut(s) | 5, 2399 |
| MluCI | AATT | 6 cut(s) | 798, 1137, 1290, 1944, 1971, 2439 |
| MluNI | TGGCCA | 2 cut(s) | 5, 2399 |
| MlyI | GAGTC | 7 cut(s) | 566, 1045, 1646, 2105, 2314, 2652, 2792 |
| MmeI | TCCRAC | 1 cut(s) | 685 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 2399 |
| Mph1103I | ATGCAT | 2 cut(s) | 1435, 2539 |
| MscI | TGGCCA | 2 cut(s) | 5, 2399 |
| MseI | TTAA | 3 cut(s) | 1527, 1995, 2265 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 2399 |
| MspA1I | CMGCKG | 3 cut(s) | 82, 497, 2797 |
| MspI | CCGG | 7 cut(s) | 287, 552, 999, 1096, 1264, 1501, 1539 |
| MunI | CAATTG | 1 cut(s) | 1137 |
| NciI | CCSGG | 3 cut(s) | 1096, 1097, 1502 |
| NcoI | CCATGG | 1 cut(s) | 894 |
| NheI | GCTAGC | 1 cut(s) | 2710 |
| NlaIV | GGNNCC | 6 cut(s) | 453, 931, 1003, 1262, 2158, 2374 |
| NmeAIII | GCCGAG | 1 cut(s) | 1369 |
| NmuCI | GTSAC | 4 cut(s) | 889, 918, 1541, 2317 |
| NsiI | ATGCAT | 2 cut(s) | 1435, 2539 |
| NspI | RCATGY | 1 cut(s) | 1600 |
| NspV | TTCGAA | 1 cut(s) | 75 |
| OliI | CACNNNNGTG | 2 cut(s) | 1187, 1752 |
| PagI | TCATGA | 2 cut(s) | 2067, 2172 |
| PaqCI | CACCTGC | 1 cut(s) | 2456 |
| PciI | ACATGT | 1 cut(s) | 1596 |
| PfeI | GAWTC | 5 cut(s) | 54, 205, 1179, 1686, 1983 |
| PflFI | GACNNNGTC | 1 cut(s) | 293 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 685 |
| PfoI | TCCNGGA | 1 cut(s) | 2683 |
| PinAI | ACCGGT | 3 cut(s) | 551, 1263, 1538 |
| PleI | GAGTC | 7 cut(s) | 565, 1044, 1645, 2105, 2314, 2652, 2791 |
| PpsI | GAGTC | 7 cut(s) | 565, 1044, 1645, 2105, 2314, 2652, 2791 |
| PscI | ACATGT | 1 cut(s) | 1596 |
| PshAI | GACNNNNGTC | 3 cut(s) | 404, 1035, 2180 |
| Psp124BI | GAGCTC | 1 cut(s) | 1668 |
| Psp1406I | AACGTT | 2 cut(s) | 39, 2644 |
| PspEI | GGTNACC | 1 cut(s) | 1541 |
| PspFI | CCCAGC | 3 cut(s) | 493, 1786, 1978 |
| PspN4I | GGNNCC | 6 cut(s) | 453, 931, 1003, 1262, 2158, 2374 |
| PspPI | GGNCC | 8 cut(s) | 118, 143, 244, 1333, 1914, 2337, 2550, 2631 |
| PstI | CTGCAG | 1 cut(s) | 135 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1823, 2553 |
| PsuI | RGATCY | 3 cut(s) | 135, 520, 2130 |
| PsyI | GACNNNGTC | 1 cut(s) | 293 |
| PvuII | CAGCTG | 3 cut(s) | 82, 497, 2797 |
| RsaI | GTAC | 5 cut(s) | 453, 794, 1591, 2158, 2417 |
| RsaNI | GTAC | 5 cut(s) | 452, 793, 1590, 2157, 2416 |
| SacI | GAGCTC | 1 cut(s) | 1668 |
| SaqAI | TTAA | 3 cut(s) | 1527, 1995, 2265 |
| Sau96I | GGNCC | 8 cut(s) | 118, 143, 244, 1333, 1914, 2337, 2550, 2631 |
| SchI | GAGTC | 7 cut(s) | 566, 1045, 1646, 2105, 2314, 2652, 2792 |
| SduI | GDGCHC | 5 cut(s) | 1282, 1507, 1668, 2238, 2778 |
| SfaNI | GCATC | 9 cut(s) | 480, 490, 1111, 1120, 1420, 1771, 1816, 1825, 2301 |
| SfcI | CTRYAG | 3 cut(s) | 131, 2419, 2482 |
| SfuI | TTCGAA | 1 cut(s) | 75 |
| SgrAI | CRCCGGYG | 3 cut(s) | 551, 1263, 1538 |
| SinI | GGWCC | 1 cut(s) | 2337 |
| SmaI | CCCGGG | 1 cut(s) | 1097 |
| SmlI | CTYRAG | 7 cut(s) | 47, 155, 182, 409, 527, 1310, 2123 |
| SmoI | CTYRAG | 7 cut(s) | 47, 155, 182, 409, 527, 1310, 2123 |
| SrfI | GCCCGGGC | 1 cut(s) | 1097 |
| Sse9I | AATT | 6 cut(s) | 798, 1137, 1290, 1944, 1971, 2439 |
| SsiI | CCGC | 6 cut(s) | 127, 366, 913, 1498, 2384, 2530 |
| SspI | AATATT | 1 cut(s) | 2563 |
| SspMI | CTAG | 5 cut(s) | 384, 389, 1842, 2711, 2807 |
| SstI | GAGCTC | 1 cut(s) | 1668 |
| StyI | CCWWGG | 5 cut(s) | 894, 1161, 1413, 1472, 2152 |
| TaaI | ACNGT | 9 cut(s) | 880, 1078, 1399, 1452, 1484, 2179, 2391, 2420, 2839 |
| TaiI | ACGT | 4 cut(s) | 42, 1242, 2647, 2781 |
| TaqI | TCGA | 5 cut(s) | 63, 75, 342, 627, 2323 |
| TaqII | GACCGA | 1 cut(s) | 1362 |
| TasI | AATT | 6 cut(s) | 798, 1137, 1290, 1944, 1971, 2439 |
| TatI | WGTACW | 1 cut(s) | 2415 |
| TauI | GCSGC | 3 cut(s) | 130, 368, 2387 |
| TfiI | GAWTC | 5 cut(s) | 54, 205, 1179, 1686, 1983 |
| Tru1I | TTAA | 3 cut(s) | 1527, 1995, 2265 |
| Tru9I | TTAA | 3 cut(s) | 1527, 1995, 2265 |
| TscAI | CASTG | 9 cut(s) | 652, 994, 1189, 1489, 1797, 1824, 2146, 2793, 2842 |
| TseFI | GTSAC | 4 cut(s) | 889, 918, 1541, 2317 |
| TseI | GCWGC | 8 cut(s) | 130, 233, 368, 371, 542, 674, 1269, 1838 |
| Tsp45I | GTSAC | 4 cut(s) | 889, 918, 1541, 2317 |
| TspDTI | ATGAA | 7 cut(s) | 328, 1337, 1596, 1946, 1975, 2017, 2512 |
| TspGWI | ACGGA | 2 cut(s) | 877, 2670 |
| TspMI | CCCGGG | 1 cut(s) | 1095 |
| TspRI | CASTG | 9 cut(s) | 652, 994, 1189, 1489, 1797, 1824, 2146, 2793, 2842 |
| Tth111I | GACNNNGTC | 1 cut(s) | 293 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 685 |
| VneI | GTGCAC | 1 cut(s) | 2234 |
| VpaK11BI | GGWCC | 1 cut(s) | 2337 |
| XceI | RCATGY | 1 cut(s) | 1600 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 662, 961, 1553 |
| XmaI | CCCGGG | 1 cut(s) | 1095 |
| XmiI | GTMKAC | 1 cut(s) | 2481 |
| XspI | CTAG | 5 cut(s) | 384, 389, 1842, 2711, 2807 |
| Zsp2I | ATGCAT | 2 cut(s) | 1435, 2539 |