Basic Information
Type: gene
Biological Identity
arabidopsis_thaliana
Physical Location & Seq
Reverse (-)
10854652 .. 10854948
AT2G25500.1
Length: 297 bp
ATGGCAAAGAAGGCGATGGAGAACGGATATAAGCTGATTCTAGGTTCTCAGTCGATGGCGAGAAAGCAGATTCTGGCTGAAATGGGATATGATTTCACTATTGTAACTGCAGATATTGATGAGAAAGCTATTAGGAAAGAGAAGCCTGAAGATTTGGTTGTGACTATTGCTGAAGCAAAAGCAAATGAGATTATATTGAAATTAGGAGGTGAAAACCAGTTTACACAAGATTCTCAACCAACTCTATTGATTACTGCAGATACTGTTGTTGTGTACAAAGGTGTTATTAGAGAATAA
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Protein Analysis
5.2
Isoelectric Point (pI)
| Domain Name |
Pfam ID |
Position |
E-value |
Description |
| Maf |
PF02545 |
11 - 92 |
7e-18 |
Maf-like protein |
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...
Gene Family Tree
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Publication-ready
Orthologous Genes
(Group: OG0009805)
Restriction Enzyme Sites
| Enzyme |
Recognition Site |
Cut Count |
Positions (bp) |
| AcuI |
CTGAAG |
2 cut(s)
|
168, 192 |
| AfaI |
GTAC |
1 cut(s)
|
275 |
| AgsI |
TTSAA |
1 cut(s)
|
199 |
| AluBI |
AGCT |
2 cut(s)
|
34, 128 |
| AluI |
AGCT |
2 cut(s)
|
34, 128 |
| AlwNI |
CAGNNNCTG |
2 cut(s)
|
73, 263 |
| AsuHPI |
GGTGA |
1 cut(s)
|
221 |
| BaeI |
ACNNNNGTAYC |
2 cut(s)
|
252, 285 |
| BccI |
CCATC |
2 cut(s)
|
10, 49 |
| BfaI |
CTAG |
1 cut(s)
|
41 |
| BfmI |
CTRYAG |
2 cut(s)
|
108, 255 |
| Bse1I |
ACTGG |
1 cut(s)
|
217 |
| BseMII |
CTCAG |
1 cut(s)
|
62 |
| BseNI |
ACTGG |
1 cut(s)
|
217 |
| Bsp1407I |
TGTACA |
1 cut(s)
|
273 |
| BspCNI |
CTCAG |
1 cut(s)
|
61 |
| BspMAI |
CTGCAG |
2 cut(s)
|
112, 259 |
| BsrGI |
TGTACA |
1 cut(s)
|
273 |
| BsrI |
ACTGG |
1 cut(s)
|
217 |
| Bst4CI |
ACNGT |
1 cut(s)
|
265 |
| BstAUI |
TGTACA |
1 cut(s)
|
273 |
| BstDEI |
CTNAG |
1 cut(s)
|
48 |
| BstMWI |
GCNNNNNNNGC |
1 cut(s)
|
11 |
| BstSFI |
CTRYAG |
2 cut(s)
|
108, 255 |
| BtgZI |
GCGATG |
1 cut(s)
|
29 |
| CaiI |
CAGNNNCTG |
2 cut(s)
|
73, 263 |
| Csp6I |
GTAC |
1 cut(s)
|
274 |
| CviJI |
RGCY |
4 cut(s)
|
34, 77, 128, 145 |
| CviKI_1 |
RGCY |
4 cut(s)
|
34, 77, 128, 145 |
| CviQI |
GTAC |
1 cut(s)
|
274 |
| DdeI |
CTNAG |
1 cut(s)
|
48 |
| Eco57I |
CTGAAG |
2 cut(s)
|
168, 192 |
| FaiI |
YATR |
3 cut(s)
|
30, 90, 194 |
| FspBI |
CTAG |
1 cut(s)
|
41 |
| HinfI |
GANTC |
3 cut(s)
|
37, 70, 230 |
| HphI |
GGTGA |
1 cut(s)
|
221 |
| Hpy166II |
GTNNAC |
2 cut(s)
|
222, 274 |
| Hpy8I |
GTNNAC |
2 cut(s)
|
222, 274 |
| HpyAV |
CCTTC |
1 cut(s)
|
4 |
| HpyCH4III |
ACNGT |
1 cut(s)
|
265 |
| HpyCH4V |
TGCA |
2 cut(s)
|
110, 257 |
| HpyF10VI |
GCNNNNNNNGC |
1 cut(s)
|
11 |
| HpyF3I |
CTNAG |
1 cut(s)
|
48 |
| LpnPI |
CCDG |
3 cut(s)
|
59, 159, 230 |
| MaeI |
CTAG |
1 cut(s)
|
41 |
| MaeIII |
GTNAC |
2 cut(s)
|
103, 160 |
| MboII |
GAAGA |
1 cut(s)
|
161 |
| MluCI |
AATT |
1 cut(s)
|
200 |
| MnlI |
CCTC |
1 cut(s)
|
200 |
| MwoI |
GCNNNNNNNGC |
1 cut(s)
|
11 |
| NmuCI |
GTSAC |
1 cut(s)
|
160 |
| PfeI |
GAWTC |
3 cut(s)
|
37, 70, 230 |
| PstI |
CTGCAG |
2 cut(s)
|
112, 259 |
| PstNI |
CAGNNNCTG |
2 cut(s)
|
73, 263 |
| RsaI |
GTAC |
1 cut(s)
|
275 |
| RsaNI |
GTAC |
1 cut(s)
|
274 |
| SetI |
ASST |
5 cut(s)
|
36, 46, 130, 211, 283 |
| SfcI |
CTRYAG |
2 cut(s)
|
108, 255 |
| SgeI |
CNNG |
6 cut(s)
|
53, 72, 86, 158, 229, 239 |
| Sse9I |
AATT |
1 cut(s)
|
200 |
| SspMI |
CTAG |
1 cut(s)
|
41 |
| TaaI |
ACNGT |
1 cut(s)
|
265 |
| TaqI |
TCGA |
1 cut(s)
|
53 |
| TasI |
AATT |
1 cut(s)
|
200 |
| TatI |
WGTACW |
1 cut(s)
|
273 |
| TfiI |
GAWTC |
3 cut(s)
|
37, 70, 230 |
| TseFI |
GTSAC |
1 cut(s)
|
160 |
| Tsp45I |
GTSAC |
1 cut(s)
|
160 |
| TspGWI |
ACGGA |
1 cut(s)
|
39 |
| XspI |
CTAG |
1 cut(s)
|
41 |
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.