Rh2AG147400

Maf-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
13505187 .. 13507192
2006 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG147400.1

Sequence Viewer

Length: 477 bp
ATGTTTAAGCAAGGAAACATACCGTGGACTAAAACGGTGTCGTATTGGTTAAATATTCGCGAAATTTCGATTTGGACGAACCAAATTGAAGCACTGGCCCAAAATGGAAAGTGGATGCTGAAAAGGGTAAGCTCAGAGAATCAAAAACAACTGTGGAGGAGAAAGATGTCGTTTCAGATAATCTTGGGCTCGGCGTCAATGGCACGACGGCAAATACTGGCGGAGATGGGCTACGAGTTCAAAATCAGGACTGCAGATATAGACGAGAAGAGTATCAGGATGGATAAGCCAGAGGAGTTGGTGATGGTTCTAGCTGAGGCAAAAATAGAGGAGGGAACTACACTCAACGTTGCTGGGGGTCTGATGCTTGAACATCCTATGATATCACCCTTTGTAGAAGCAGTGATAGGGACAAGTGACACGGTAATGGGACTGCCTAAAGAACTCACAGAAAAGCTCCTCCATGAAGCACTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

158

Amino Acids

18.09

Weight (kDa)

6.76

Isoelectric Point (pI)

45.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Maf PF02545 59 - 111 5.1e-11 Maf-like protein
Maf PF02545 110 - 156 4.8e-06 Maf-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0009805)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 60
AciI CCGC 1 cut(s) 221
AclI AACGTT 1 cut(s) 348
AcsI RAATTY 1 cut(s) 63
AcyI GRCGYC 1 cut(s) 194
AgsI TTSAA 3 cut(s) 89, 241, 371
AluBI AGCT 3 cut(s) 132, 314, 457
AluI AGCT 3 cut(s) 132, 314, 457
AoxI GGCC 1 cut(s) 96
ApoI RAATTY 1 cut(s) 63
AspS9I GGNCC 1 cut(s) 97
AsuHPI GGTGA 2 cut(s) 313, 378
BanII GRGCYC 1 cut(s) 191
BbvCI CCTCAGC 1 cut(s) 315
BccI CCATC 3 cut(s) 220, 274, 298
BceAI ACGGC 1 cut(s) 224
BfaI CTAG 1 cut(s) 311
BfmI CTRYAG 1 cut(s) 252
BmgT120I GGNCC 1 cut(s) 97
BmsI GCATC 2 cut(s) 105, 354
Bpu10I CCTNAGC 1 cut(s) 315
BsaHI GRCGYC 1 cut(s) 194
BsaJI CCNNGG 1 cut(s) 23
Bse1I ACTGG 2 cut(s) 99, 222
BseDI CCNNGG 1 cut(s) 23
BseGI GGATG 3 cut(s) 120, 285, 373
BseMII CTCAG 2 cut(s) 147, 306
BseNI ACTGG 2 cut(s) 99, 222
BseRI GAGGAG 4 cut(s) 172, 308, 344, 449
BseYI CCCAGC 1 cut(s) 353
Bsh1236I CGCG 1 cut(s) 60
BshFI GGCC 1 cut(s) 98
BslFI GGGAC 2 cut(s) 424, 444
BsmFI GGGAC 2 cut(s) 424, 444
BsnI GGCC 1 cut(s) 98
Bsp1286I GDGCHC 1 cut(s) 191
Bsp68I TCGCGA 1 cut(s) 60
BspACI CCGC 1 cut(s) 221
BspANI GGCC 1 cut(s) 98
BspCNI CTCAG 2 cut(s) 146, 307
BspFNI CGCG 1 cut(s) 60
BspMAI CTGCAG 1 cut(s) 256
BsrI ACTGG 2 cut(s) 99, 222
BssECI CCNNGG 1 cut(s) 23
BssNI GRCGYC 1 cut(s) 194
Bst4CI ACNGT 4 cut(s) 24, 37, 153, 424
Bst6I CTCTTC 1 cut(s) 263
BstACI GRCGYC 1 cut(s) 194
BstDEI CTNAG 2 cut(s) 133, 315
BstDSI CCRYGG 1 cut(s) 23
BstF5I GGATG 3 cut(s) 120, 285, 373
BstFNI CGCG 1 cut(s) 60
BstMWI GCNNNNNNNGC 1 cut(s) 200
BstSFI CTRYAG 1 cut(s) 252
BstUI CGCG 1 cut(s) 60
BsuRI GGCC 1 cut(s) 98
BtgI CCRYGG 1 cut(s) 23
BtsCI GGATG 3 cut(s) 120, 285, 373
BtsI GCAGTG 1 cut(s) 408
BtsIMutI CAGTG 2 cut(s) 92, 408
BtuMI TCGCGA 1 cut(s) 60
Cfr13I GGNCC 1 cut(s) 97
CseI GACGC 1 cut(s) 183
CviAII CATG 1 cut(s) 464
CviJI RGCY 7 cut(s) 98, 132, 189, 231, 289, 314, 457
CviKI_1 RGCY 7 cut(s) 98, 132, 189, 231, 289, 314, 457
DdeI CTNAG 2 cut(s) 133, 315
Eam1104I CTCTTC 1 cut(s) 263
EarI CTCTTC 1 cut(s) 263
EciI GGCGGA 1 cut(s) 236
Eco24I GRGCYC 1 cut(s) 191
Eco32I GATATC 1 cut(s) 384
EcoRV GATATC 1 cut(s) 384
EcoT38I GRGCYC 1 cut(s) 191
FaeI CATG 1 cut(s) 467
FaiI YATR 4 cut(s) 20, 260, 380, 465
FaqI GGGAC 2 cut(s) 424, 444
FatI CATG 1 cut(s) 463
FokI GGATG 3 cut(s) 127, 292, 360
FriOI GRGCYC 1 cut(s) 191
FspBI CTAG 1 cut(s) 311
GsaI CCCAGC 1 cut(s) 357
HaeIII GGCC 1 cut(s) 98
HgaI GACGC 1 cut(s) 183
Hin1I GRCGYC 1 cut(s) 194
Hin1II CATG 1 cut(s) 467
HinfI GANTC 1 cut(s) 139
HphI GGTGA 2 cut(s) 313, 378
Hpy166II GTNNAC 1 cut(s) 27
Hpy188I TCNGA 3 cut(s) 136, 177, 363
Hpy188III TCNNGA 3 cut(s) 59, 247, 277
Hpy8I GTNNAC 1 cut(s) 27
Hpy99I CGWCG 1 cut(s) 210
HpyCH4III ACNGT 4 cut(s) 24, 37, 153, 424
HpyCH4IV ACGT 1 cut(s) 348
HpyCH4V TGCA 1 cut(s) 254
HpyF10VI GCNNNNNNNGC 1 cut(s) 200
HpyF3I CTNAG 2 cut(s) 133, 315
HpySE526I ACGT 1 cut(s) 348
Hsp92I GRCGYC 1 cut(s) 194
Hsp92II CATG 1 cut(s) 467
LmnI GCTCC 1 cut(s) 462
LpnPI CCDG 6 cut(s) 80, 203, 232, 262, 303, 339
LweI GCATC 2 cut(s) 105, 354
MaeI CTAG 1 cut(s) 311
MaeII ACGT 1 cut(s) 348
MaeIII GTNAC 1 cut(s) 416
MboII GAAGA 1 cut(s) 280
MhlI GDGCHC 1 cut(s) 191
MluCI AATT 2 cut(s) 63, 84
MnlI CCTC 6 cut(s) 150, 286, 310, 322, 325, 470
MseI TTAA 2 cut(s) 6, 50
MslI CAYNNNNRTG 1 cut(s) 425
MvnI CGCG 1 cut(s) 60
MwoI GCNNNNNNNGC 1 cut(s) 200
NlaIII CATG 1 cut(s) 467
NmeAIII GCCGAG 1 cut(s) 170
NmuCI GTSAC 1 cut(s) 416
NruI TCGCGA 1 cut(s) 60
PcsI WCGNNNNNNNCGW 1 cut(s) 74
PfeI GAWTC 1 cut(s) 139
Psp1406I AACGTT 1 cut(s) 348
PspFI CCCAGC 1 cut(s) 353
PspPI GGNCC 1 cut(s) 97
PstI CTGCAG 1 cut(s) 256
RruI TCGCGA 1 cut(s) 60
RseI CAYNNNNRTG 1 cut(s) 425
SaqAI TTAA 2 cut(s) 6, 50
Sau96I GGNCC 1 cut(s) 97
SduI GDGCHC 1 cut(s) 191
SetI ASST 4 cut(s) 134, 316, 351, 459
SfaNI GCATC 2 cut(s) 105, 354
SfcI CTRYAG 1 cut(s) 252
SmiMI CAYNNNNRTG 1 cut(s) 425
Sse9I AATT 2 cut(s) 63, 84
SsiI CCGC 1 cut(s) 221
SspI AATATT 1 cut(s) 55
SspMI CTAG 1 cut(s) 311
TaaI ACNGT 4 cut(s) 24, 37, 153, 424
TaiI ACGT 1 cut(s) 351
TaqI TCGA 1 cut(s) 68
TasI AATT 2 cut(s) 63, 84
TfiI GAWTC 1 cut(s) 139
Tru1I TTAA 2 cut(s) 6, 50
Tru9I TTAA 2 cut(s) 6, 50
TscAI CASTG 2 cut(s) 99, 408
TseFI GTSAC 1 cut(s) 416
Tsp45I GTSAC 1 cut(s) 416
TspRI CASTG 2 cut(s) 99, 408
XapI RAATTY 1 cut(s) 63
XspI CTAG 1 cut(s) 311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.