Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0009805

Physical Location & Seq

Genomic Coordinates Forward (+)

16435962 .. 16438413

Gene Structure 2452 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G155200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 609 bp

ATGTCATTTCAGATAATATTGGGTTCGGCTTCAATGGCACGACGGAAAATACTAGCGGAGATGGGATATGAATTCACAATCCTGACTGCAGACATAGACGAAAAAAGTATACGGATGGATAAGCCTGAGGAATTGGTGATGGTTCTAGCTGAGGCCAAAGCAGATGCCATAATTTCAAGGCTTCAAAGTACAAGTCAGCCGGATGAAGATGCTCATGCAACACTGTTGATTACTGCGGACACAGTGGTGGTGTATGAAGGGATAATAAGGGAAAAACCATCCAGCAAGGAAGAAGCATGGAATTTTATCAAAGGCTATTCTGGCGGCCAAGCAGCAGTTATAGGATCTGTATTTGTGACCAACCTTAAAACAGGAAAAAGAAAAGGAGGATGTTGCAGAGCGGAGGTTTATTTTCATGTCATACCAGAGGAGATTATTGATAGCCTGATAGAGGAGGGAATTACACTCGATGTCGCGGGGGGTTTGATGCTGGAACATCCGCTGATATCTCCTTTTGTAGAAGCAGTGGTAGGGACGACTGACACAGTGATGGGGCTACCTAAAGAATTCACAGAAAAACTCATTCATGAAGCACTCCAACTGCCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Maf

Protein Analysis

203

Amino Acids

22.07

Weight (kDa)

4.79

Isoelectric Point (pI)

37.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009805)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25500 AT5G66550 AT5G66550 AT5G66550 AT5G66550
fragaria_vesca	FvH4_1g13260 FvH4_1g13260
malus_domestica	MD02G1147000.v1.1
prunus_persica	Prupe.7G155200_v2.0.a1
pyrus_communis	pycom02g11630
rosa_chinensis	RchiOBHm_Chr2g0101501
rosa_laevigata	RLG00000017083
rosa_multiflora	Rmu_sc0006153.1_g000022
rosa_roxburghii	Rroxscaffold_2G00141290
rosa_rugosa	Rorug02G0098000 Rorug02G0098100
rosa_samantha	Rh2AG147400 Rh2BG152600 Rh2CG153400 Rh2DG152800
rosa_wichuraiana	Rw2G011480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	401
AccI	GTMKAC	1 cut(s)	109
AccII	CGCG	1 cut(s)	476
AciI	CCGC	6 cut(s)	56, 236, 324, 401, 476, 500
AclWI	GGATC	1 cut(s)	352
AcoI	YGGCCR	1 cut(s)	325
AcsI	RAATTY	3 cut(s)	71, 301, 566
AfaI	GTAC	1 cut(s)	190
AfiI	CCNNNNNNNGG	1 cut(s)	451
AgsI	TTSAA	3 cut(s)	33, 177, 185
AleI	CACNNNNGTG	1 cut(s)	245
AluBI	AGCT	1 cut(s)	149
AluI	AGCT	1 cut(s)	149
AlwI	GGATC	1 cut(s)	352
AoxI	GGCC	2 cut(s)	153, 325
ApeKI	GCWGC	1 cut(s)	332
ApoI	RAATTY	3 cut(s)	71, 301, 566
ArsI	GACNNNNNNTTYG	2 cut(s)	178, 210
AsuHPI	GGTGA	1 cut(s)	148
AxyI	CCTNAGG	1 cut(s)	126
BbvCI	CCTCAGC	1 cut(s)	150
BbvI	GCAGC	1 cut(s)	344
BccI	CCATC	5 cut(s)	55, 109, 133, 286, 544
BceAI	ACGGC	1 cut(s)	589
BfaI	CTAG	2 cut(s)	53, 146
BfmI	CTRYAG	1 cut(s)	87
BisI	GCNGC	2 cut(s)	325, 333
BlsI	GCNGC	2 cut(s)	326, 334
BmsI	GCATC	3 cut(s)	154, 199, 477
Bpu10I	CCTNAGC	1 cut(s)	150
Bsc4I	CCNNNNNNNGG	1 cut(s)	451
Bse21I	CCTNAGG	1 cut(s)	126
BseGI	GGATG	5 cut(s)	120, 208, 278, 395, 496
BseLI	CCNNNNNNNGG	1 cut(s)	451
BseMII	CTCAG	2 cut(s)	117, 141
BseRI	GAGGAG	2 cut(s)	443, 467
BseXI	GCAGC	1 cut(s)	344
Bsh1236I	CGCG	1 cut(s)	476
BshFI	GGCC	2 cut(s)	155, 327
BsiSI	CCGG	1 cut(s)	200
BslFI	GGGAC	1 cut(s)	547
BslI	CCNNNNNNNGG	1 cut(s)	451
BsmFI	GGGAC	1 cut(s)	547
BsnI	GGCC	2 cut(s)	155, 327
Bsp143I	GATC	1 cut(s)	344
BspACI	CCGC	6 cut(s)	56, 236, 324, 401, 476, 500
BspANI	GGCC	2 cut(s)	155, 327
BspCNI	CTCAG	2 cut(s)	118, 142
BspFNI	CGCG	1 cut(s)	476
BspHI	TCATGA	1 cut(s)	586
BspMAI	CTGCAG	1 cut(s)	91
BspPI	GGATC	1 cut(s)	352
BsrBI	CCGCTC	1 cut(s)	401
BssMI	GATC	1 cut(s)	344
BssNAI	GTATAC	1 cut(s)	110
Bst1107I	GTATAC	1 cut(s)	110
Bst4CI	ACNGT	3 cut(s)	225, 244, 547
BstDEI	CTNAG	2 cut(s)	126, 150
BstENI	CCTNNNNNAGG	1 cut(s)	449
BstF5I	GGATG	5 cut(s)	120, 208, 278, 395, 496
BstFNI	CGCG	1 cut(s)	476
BstKTI	GATC	1 cut(s)	347
BstMBI	GATC	1 cut(s)	344
BstMWI	GCNNNNNNNGC	2 cut(s)	35, 321
BstSFI	CTRYAG	1 cut(s)	87
BstUI	CGCG	1 cut(s)	476
BstV1I	GCAGC	1 cut(s)	344
BstX2I	RGATCY	1 cut(s)	344
BstYI	RGATCY	1 cut(s)	344
BstZ17I	GTATAC	1 cut(s)	110
Bsu36I	CCTNAGG	1 cut(s)	126
BsuRI	GGCC	2 cut(s)	155, 327
BtsCI	GGATG	5 cut(s)	120, 208, 278, 395, 496
BtsI	GCAGTG	1 cut(s)	531
BtsIMutI	CAGTG	4 cut(s)	221, 249, 531, 552
CciI	TCATGA	1 cut(s)	586
Csp6I	GTAC	1 cut(s)	189
CviAII	CATG	4 cut(s)	215, 297, 416, 587
CviQI	GTAC	1 cut(s)	189
DdeI	CTNAG	2 cut(s)	126, 150
DpnI	GATC	1 cut(s)	346
DpnII	GATC	1 cut(s)	344
EaeI	YGGCCR	1 cut(s)	325
Eco32I	GATATC	1 cut(s)	507
Eco81I	CCTNAGG	1 cut(s)	126
EcoNI	CCTNNNNNAGG	1 cut(s)	449
EcoRI	GAATTC	2 cut(s)	71, 566
EcoRV	GATATC	1 cut(s)	507
FaeI	CATG	4 cut(s)	218, 300, 419, 590
FaqI	GGGAC	1 cut(s)	547
FatI	CATG	4 cut(s)	214, 296, 415, 586
FauI	CCCGC	1 cut(s)	469
FblI	GTMKAC	1 cut(s)	109
Fnu4HI	GCNGC	2 cut(s)	325, 333
FokI	GGATG	5 cut(s)	127, 215, 265, 402, 483
Fsp4HI	GCNGC	2 cut(s)	325, 333
FspBI	CTAG	2 cut(s)	53, 146
GluI	GCNGC	2 cut(s)	325, 333
HaeIII	GGCC	2 cut(s)	155, 327
HapII	CCGG	1 cut(s)	200
Hin1II	CATG	4 cut(s)	218, 300, 419, 590
HpaII	CCGG	1 cut(s)	200
HphI	GGTGA	1 cut(s)	148
Hpy166II	GTNNAC	1 cut(s)	110
Hpy188I	TCNGA	1 cut(s)	12
Hpy188III	TCNNGA	2 cut(s)	82, 587
Hpy8I	GTNNAC	1 cut(s)	110
Hpy99I	CGWCG	1 cut(s)	45
HpyAV	CCTTC	1 cut(s)	251
HpyCH4III	ACNGT	3 cut(s)	225, 244, 547
HpyCH4V	TGCA	3 cut(s)	89, 218, 396
HpyF10VI	GCNNNNNNNGC	2 cut(s)	35, 321
HpyF3I	CTNAG	2 cut(s)	126, 150
Hsp92II	CATG	4 cut(s)	218, 300, 419, 590
Kzo9I	GATC	1 cut(s)	344
LpnPI	CCDG	9 cut(s)	95, 138, 213, 295, 306, 357, 438, 458, 476
Lsp1109I	GCAGC	1 cut(s)	344
LweI	GCATC	3 cut(s)	154, 199, 477
MaeI	CTAG	2 cut(s)	53, 146
MaeIII	GTNAC	1 cut(s)	355
MalI	GATC	1 cut(s)	346
MbiI	CCGCTC	1 cut(s)	401
MboI	GATC	1 cut(s)	344
MboII	GAAGA	2 cut(s)	218, 302
MflI	RGATCY	1 cut(s)	344
MluCI	AATT	6 cut(s)	71, 131, 171, 301, 459, 566
MnlI	CCTC	7 cut(s)	121, 145, 380, 397, 421, 445, 448
MseI	TTAA	1 cut(s)	366
MslI	CAYNNNNRTG	2 cut(s)	245, 548
MspA1I	CMGCKG	1 cut(s)	502
MspI	CCGG	1 cut(s)	200
MvnI	CGCG	1 cut(s)	476
MwoI	GCNNNNNNNGC	2 cut(s)	35, 321
NdeII	GATC	1 cut(s)	344
NlaIII	CATG	4 cut(s)	218, 300, 419, 590
NmuCI	GTSAC	1 cut(s)	355
OliI	CACNNNNGTG	1 cut(s)	245
PagI	TCATGA	1 cut(s)	586
PkrI	GCNGC	2 cut(s)	326, 334
PstI	CTGCAG	1 cut(s)	91
PsuI	RGATCY	1 cut(s)	344
RsaI	GTAC	1 cut(s)	190
RsaNI	GTAC	1 cut(s)	189
RseI	CAYNNNNRTG	2 cut(s)	245, 548
SaqAI	TTAA	1 cut(s)	366
SatI	GCNGC	2 cut(s)	325, 333
Sau3AI	GATC	1 cut(s)	344
SetI	ASST	4 cut(s)	151, 366, 408, 562
SfaNI	GCATC	3 cut(s)	154, 199, 477
SfcI	CTRYAG	1 cut(s)	87
SmiMI	CAYNNNNRTG	2 cut(s)	245, 548
Sse9I	AATT	6 cut(s)	71, 131, 171, 301, 459, 566
SsiI	CCGC	6 cut(s)	56, 236, 324, 401, 476, 500
SspI	AATATT	1 cut(s)	18
SspMI	CTAG	2 cut(s)	53, 146
TaaI	ACNGT	3 cut(s)	225, 244, 547
TaqI	TCGA	1 cut(s)	468
TasI	AATT	6 cut(s)	71, 131, 171, 301, 459, 566
TatI	WGTACW	1 cut(s)	188
TauI	GCSGC	1 cut(s)	327
Tru1I	TTAA	1 cut(s)	366
Tru9I	TTAA	1 cut(s)	366
TscAI	CASTG	4 cut(s)	228, 249, 531, 552
TseFI	GTSAC	1 cut(s)	355
TseI	GCWGC	1 cut(s)	332
Tsp45I	GTSAC	1 cut(s)	355
TspDTI	ATGAA	6 cut(s)	84, 219, 270, 404, 575, 603
TspGWI	ACGGA	2 cut(s)	58, 127
TspRI	CASTG	4 cut(s)	228, 249, 531, 552
XagI	CCTNNNNNAGG	1 cut(s)	449
XapI	RAATTY	3 cut(s)	71, 301, 566
XmiI	GTMKAC	1 cut(s)	109
XspI	CTAG	2 cut(s)	53, 146

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.