BRCA1-associated protein 2
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G26000 AT2G26000 AT2G26000 |
| fragaria_vesca | FvH4_6g29040 |
| malus_domestica | MD17G1218900.v1.1 |
| prunus_persica | Prupe.3G094400_v2.0.a1 Prupe.3G094400_v2.0.a1 |
| pyrus_communis | pycom17g22370 |
| rosa_chinensis | RchiOBHm_Chr2g0133711 |
| rosa_laevigata | RLG00000019358 |
| rosa_multiflora | Rmu_sc0013154.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00110880 |
| rosa_rugosa | Rorug02G0313200 |
| rosa_samantha | Rh2AG366600 Rh2BG372300 Rh2CG349900 Rh2DG389200 |
| rosa_wichuraiana | Rw2G029830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 3 cut(s) | 395, 1082, 1301 |
| AccB1I | GGYRCC | 1 cut(s) | 199 |
| AccII | CGCG | 1 cut(s) | 96 |
| AciI | CCGC | 3 cut(s) | 96, 240, 714 |
| AclWI | GGATC | 2 cut(s) | 441, 454 |
| AcoI | YGGCCR | 1 cut(s) | 593 |
| AcsI | RAATTY | 2 cut(s) | 643, 871 |
| AcyI | GRCGYC | 1 cut(s) | 1296 |
| AdeI | CACNNNGTG | 1 cut(s) | 794 |
| AfaI | GTAC | 1 cut(s) | 722 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 83, 670 |
| AflIII | ACRYGT | 2 cut(s) | 793, 963 |
| AgeI | ACCGGT | 1 cut(s) | 434 |
| AgsI | TTSAA | 8 cut(s) | 296, 379, 785, 839, 871, 974, 1106, 1114 |
| AjnI | CCWGG | 2 cut(s) | 1067, 1290 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1215, 1247 |
| AluBI | AGCT | 6 cut(s) | 781, 859, 909, 1025, 1060, 1231 |
| AluI | AGCT | 6 cut(s) | 781, 859, 909, 1025, 1060, 1231 |
| Alw21I | GWGCWC | 1 cut(s) | 1151 |
| Alw26I | GTCTC | 6 cut(s) | 83, 749, 1042, 1271, 1276, 1309 |
| AlwI | GGATC | 2 cut(s) | 441, 454 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1025, 1051, 1060 |
| AoxI | GGCC | 3 cut(s) | 478, 593, 1245 |
| ApeKI | GCWGC | 4 cut(s) | 473, 711, 1025, 1060 |
| ApoI | RAATTY | 2 cut(s) | 643, 871 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 953, 985 |
| AsiGI | ACCGGT | 1 cut(s) | 434 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 374, 1209 |
| AspS9I | GGNCC | 4 cut(s) | 479, 523, 1246, 1288 |
| AsuHPI | GGTGA | 4 cut(s) | 35, 818, 824, 1271 |
| AvaII | GGWCC | 2 cut(s) | 523, 1288 |
| BaeGI | GKGCMC | 1 cut(s) | 204 |
| BalI | TGGCCA | 1 cut(s) | 595 |
| BamHI | GGATCC | 1 cut(s) | 446 |
| BanI | GGYRCC | 1 cut(s) | 199 |
| Bbv12I | GWGCWC | 1 cut(s) | 1151 |
| BbvI | GCAGC | 4 cut(s) | 460, 698, 1012, 1047 |
| BccI | CCATC | 3 cut(s) | 845, 890, 1250 |
| BciT130I | CCWGG | 2 cut(s) | 1069, 1292 |
| BcoDI | GTCTC | 6 cut(s) | 83, 749, 1042, 1271, 1276, 1309 |
| BfaI | CTAG | 2 cut(s) | 78, 860 |
| BfmI | CTRYAG | 1 cut(s) | 1052 |
| BisI | GCNGC | 5 cut(s) | 241, 474, 712, 1026, 1061 |
| BlsI | GCNGC | 5 cut(s) | 242, 475, 713, 1027, 1062 |
| Bme1390I | CCNGG | 2 cut(s) | 1069, 1292 |
| Bme18I | GGWCC | 2 cut(s) | 523, 1288 |
| BmgT120I | GGNCC | 4 cut(s) | 479, 523, 1246, 1288 |
| BmiI | GGNNCC | 4 cut(s) | 176, 201, 244, 448 |
| BmrFI | CCNGG | 2 cut(s) | 1069, 1292 |
| BmrI | ACTGGG | 3 cut(s) | 497, 605, 757 |
| BmsI | GCATC | 2 cut(s) | 115, 928 |
| BmuI | ACTGGG | 3 cut(s) | 497, 605, 757 |
| BpuEI | CTTGAG | 2 cut(s) | 533, 797 |
| BsaHI | GRCGYC | 1 cut(s) | 1296 |
| BsaWI | WCCGGW | 2 cut(s) | 20, 434 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 83, 670 |
| Bse118I | RCCGGY | 2 cut(s) | 434, 828 |
| Bse1I | ACTGG | 5 cut(s) | 232, 267, 503, 611, 752 |
| Bse3DI | GCAATG | 2 cut(s) | 571, 763 |
| BseBI | CCWGG | 2 cut(s) | 1069, 1292 |
| BseGI | GGATG | 4 cut(s) | 690, 901, 1207, 1261 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 83, 670 |
| BseMI | GCAATG | 2 cut(s) | 571, 763 |
| BseMII | CTCAG | 3 cut(s) | 878, 1032, 1287 |
| BseNI | ACTGG | 5 cut(s) | 232, 267, 503, 611, 752 |
| BseRI | GAGGAG | 3 cut(s) | 139, 142, 767 |
| BseSI | GKGCMC | 1 cut(s) | 204 |
| BseXI | GCAGC | 4 cut(s) | 460, 698, 1012, 1047 |
| Bsh1236I | CGCG | 1 cut(s) | 96 |
| BshFI | GGCC | 3 cut(s) | 480, 595, 1247 |
| BshNI | GGYRCC | 1 cut(s) | 199 |
| BshTI | ACCGGT | 1 cut(s) | 434 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1151 |
| BsiSI | CCGG | 3 cut(s) | 21, 435, 829 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 83, 670 |
| BsmAI | GTCTC | 6 cut(s) | 83, 749, 1042, 1271, 1276, 1309 |
| BsmBI | CGTCTC | 1 cut(s) | 1271 |
| BsmI | GAATGC | 1 cut(s) | 540 |
| BsnI | GGCC | 3 cut(s) | 480, 595, 1247 |
| Bsp1286I | GDGCHC | 2 cut(s) | 204, 1151 |
| Bsp143I | GATC | 1 cut(s) | 446 |
| BspACI | CCGC | 3 cut(s) | 96, 240, 714 |
| BspANI | GGCC | 3 cut(s) | 480, 595, 1247 |
| BspCNI | CTCAG | 3 cut(s) | 879, 1031, 1286 |
| BspFNI | CGCG | 1 cut(s) | 96 |
| BspLI | GGNNCC | 4 cut(s) | 176, 201, 244, 448 |
| BspMAI | CTGCAG | 1 cut(s) | 1056 |
| BspPI | GGATC | 2 cut(s) | 441, 454 |
| BspT107I | GGYRCC | 1 cut(s) | 199 |
| BsrDI | GCAATG | 2 cut(s) | 571, 763 |
| BsrFI | RCCGGY | 2 cut(s) | 434, 828 |
| BsrI | ACTGG | 5 cut(s) | 232, 267, 503, 611, 752 |
| BssAI | RCCGGY | 2 cut(s) | 434, 828 |
| BssMI | GATC | 1 cut(s) | 446 |
| BssNI | GRCGYC | 1 cut(s) | 1296 |
| Bst2UI | CCWGG | 2 cut(s) | 1069, 1292 |
| Bst4CI | ACNGT | 5 cut(s) | 55, 277, 375, 926, 1303 |
| Bst6I | CTCTTC | 2 cut(s) | 1327, 1358 |
| BstACI | GRCGYC | 1 cut(s) | 1296 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1060 |
| BstC8I | GCNNGC | 5 cut(s) | 13, 407, 478, 857, 1030 |
| BstDEI | CTNAG | 4 cut(s) | 887, 1018, 1219, 1273 |
| BstF5I | GGATG | 4 cut(s) | 690, 901, 1207, 1261 |
| BstFNI | CGCG | 1 cut(s) | 96 |
| BstKTI | GATC | 1 cut(s) | 449 |
| BstMAI | GTCTC | 6 cut(s) | 83, 749, 1042, 1271, 1276, 1309 |
| BstMBI | GATC | 1 cut(s) | 446 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 93, 237, 1034, 1060, 1193 |
| BstNI | CCWGG | 2 cut(s) | 1069, 1292 |
| BstNSI | RCATGY | 3 cut(s) | 737, 967, 1352 |
| BstSCI | CCNGG | 2 cut(s) | 1067, 1290 |
| BstSFI | CTRYAG | 1 cut(s) | 1052 |
| BstSLI | GKGCMC | 1 cut(s) | 204 |
| BstUI | CGCG | 1 cut(s) | 96 |
| BstV1I | GCAGC | 4 cut(s) | 460, 698, 1012, 1047 |
| BstX2I | RGATCY | 1 cut(s) | 446 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1256 |
| BstYI | RGATCY | 1 cut(s) | 446 |
| BsuRI | GGCC | 3 cut(s) | 480, 595, 1247 |
| BtsCI | GGATG | 4 cut(s) | 690, 901, 1207, 1261 |
| BtsIMutI | CAGTG | 4 cut(s) | 510, 745, 931, 1299 |
| Cac8I | GCNNGC | 5 cut(s) | 13, 407, 478, 857, 1030 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1025, 1051, 1060 |
| Cfr10I | RCCGGY | 2 cut(s) | 434, 828 |
| Cfr13I | GGNCC | 4 cut(s) | 479, 523, 1246, 1288 |
| CseI | GACGC | 1 cut(s) | 1304 |
| CsiI | ACCWGGT | 1 cut(s) | 1067 |
| Csp6I | GTAC | 1 cut(s) | 721 |
| CspAI | ACCGGT | 1 cut(s) | 434 |
| CviAII | CATG | 8 cut(s) | 103, 211, 553, 579, 734, 878, 964, 1349 |
| CviQI | GTAC | 1 cut(s) | 721 |
| DdeI | CTNAG | 4 cut(s) | 887, 1018, 1219, 1273 |
| DpnI | GATC | 1 cut(s) | 448 |
| DpnII | GATC | 1 cut(s) | 446 |
| DraIII | CACNNNGTG | 1 cut(s) | 794 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 395, 1082, 1301 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 395, 1082, 1301 |
| EaeI | YGGCCR | 1 cut(s) | 593 |
| Eam1104I | CTCTTC | 2 cut(s) | 1327, 1358 |
| EarI | CTCTTC | 2 cut(s) | 1327, 1358 |
| Eco47I | GGWCC | 2 cut(s) | 523, 1288 |
| EcoRI | GAATTC | 1 cut(s) | 871 |
| EcoRII | CCWGG | 2 cut(s) | 1067, 1290 |
| EcoT22I | ATGCAT | 1 cut(s) | 108 |
| Esp3I | CGTCTC | 1 cut(s) | 1271 |
| FaeI | CATG | 8 cut(s) | 106, 214, 556, 582, 737, 881, 967, 1352 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1215, 1247 |
| FatI | CATG | 8 cut(s) | 102, 210, 552, 578, 733, 877, 963, 1348 |
| FauNDI | CATATG | 1 cut(s) | 217 |
| Fnu4HI | GCNGC | 5 cut(s) | 241, 474, 712, 1026, 1061 |
| FokI | GGATG | 4 cut(s) | 697, 908, 1214, 1268 |
| Fsp4HI | GCNGC | 5 cut(s) | 241, 474, 712, 1026, 1061 |
| FspBI | CTAG | 2 cut(s) | 78, 860 |
| GluI | GCNGC | 5 cut(s) | 241, 474, 712, 1026, 1061 |
| HaeIII | GGCC | 3 cut(s) | 480, 595, 1247 |
| HapII | CCGG | 3 cut(s) | 21, 435, 829 |
| HgaI | GACGC | 1 cut(s) | 1304 |
| Hin1I | GRCGYC | 1 cut(s) | 1296 |
| Hin1II | CATG | 8 cut(s) | 106, 214, 556, 582, 737, 881, 967, 1352 |
| HinfI | GANTC | 9 cut(s) | 26, 46, 81, 91, 157, 335, 599, 676, 1210 |
| HpaII | CCGG | 3 cut(s) | 21, 435, 829 |
| HphI | GGTGA | 4 cut(s) | 35, 818, 824, 1271 |
| Hpy166II | GTNNAC | 3 cut(s) | 432, 826, 961 |
| Hpy188I | TCNGA | 8 cut(s) | 40, 51, 118, 365, 888, 922, 1021, 1276 |
| Hpy8I | GTNNAC | 3 cut(s) | 432, 826, 961 |
| HpyAV | CCTTC | 8 cut(s) | 165, 256, 477, 577, 711, 722, 735, 1177 |
| HpyCH4III | ACNGT | 5 cut(s) | 55, 277, 375, 926, 1303 |
| HpyCH4IV | ACGT | 2 cut(s) | 793, 1140 |
| HpyCH4V | TGCA | 6 cut(s) | 106, 221, 558, 1054, 1063, 1352 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 93, 237, 1034, 1060, 1193 |
| HpyF3I | CTNAG | 4 cut(s) | 887, 1018, 1219, 1273 |
| HpySE526I | ACGT | 2 cut(s) | 793, 1140 |
| Hsp92I | GRCGYC | 1 cut(s) | 1296 |
| Hsp92II | CATG | 8 cut(s) | 106, 214, 556, 582, 737, 881, 967, 1352 |
| Kzo9I | GATC | 1 cut(s) | 446 |
| LmnI | GCTCC | 2 cut(s) | 248, 1146 |
| Lsp1109I | GCAGC | 4 cut(s) | 460, 698, 1012, 1047 |
| LweI | GCATC | 2 cut(s) | 115, 928 |
| MabI | ACCWGGT | 1 cut(s) | 1067 |
| MaeI | CTAG | 2 cut(s) | 78, 860 |
| MaeII | ACGT | 2 cut(s) | 793, 1140 |
| MaeIII | GTNAC | 2 cut(s) | 812, 1367 |
| MalI | GATC | 1 cut(s) | 448 |
| MboI | GATC | 1 cut(s) | 446 |
| MflI | RGATCY | 1 cut(s) | 446 |
| MhlI | GDGCHC | 2 cut(s) | 204, 1151 |
| MlsI | TGGCCA | 1 cut(s) | 595 |
| MluCI | AATT | 6 cut(s) | 111, 589, 643, 817, 871, 1097 |
| MluNI | TGGCCA | 1 cut(s) | 595 |
| MlyI | GAGTC | 1 cut(s) | 85 |
| MmeI | TCCRAC | 1 cut(s) | 141 |
| Mox20I | TGGCCA | 1 cut(s) | 595 |
| Mph1103I | ATGCAT | 1 cut(s) | 108 |
| MroXI | GAANNNNTTC | 2 cut(s) | 374, 1209 |
| MscI | TGGCCA | 1 cut(s) | 595 |
| MslI | CAYNNNNRTG | 1 cut(s) | 551 |
| Msp20I | TGGCCA | 1 cut(s) | 595 |
| MspI | CCGG | 3 cut(s) | 21, 435, 829 |
| MspR9I | CCNGG | 2 cut(s) | 1069, 1292 |
| Mva1269I | GAATGC | 1 cut(s) | 540 |
| MvaI | CCWGG | 2 cut(s) | 1069, 1292 |
| MvnI | CGCG | 1 cut(s) | 96 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 93, 237, 1034, 1060, 1193 |
| NdeI | CATATG | 1 cut(s) | 217 |
| NdeII | GATC | 1 cut(s) | 446 |
| NlaIII | CATG | 8 cut(s) | 106, 214, 556, 582, 737, 881, 967, 1352 |
| NlaIV | GGNNCC | 4 cut(s) | 176, 201, 244, 448 |
| NmuCI | GTSAC | 1 cut(s) | 812 |
| NsiI | ATGCAT | 1 cut(s) | 108 |
| NspI | RCATGY | 3 cut(s) | 737, 967, 1352 |
| PciI | ACATGT | 1 cut(s) | 963 |
| PctI | GAATGC | 1 cut(s) | 540 |
| PdmI | GAANNNNTTC | 2 cut(s) | 374, 1209 |
| PfeI | GAWTC | 8 cut(s) | 26, 46, 81, 157, 335, 599, 676, 1210 |
| PfoI | TCCNGGA | 1 cut(s) | 1290 |
| PinAI | ACCGGT | 1 cut(s) | 434 |
| PkrI | GCNGC | 5 cut(s) | 242, 475, 713, 1027, 1062 |
| PleI | GAGTC | 1 cut(s) | 85 |
| PpsI | GAGTC | 1 cut(s) | 85 |
| PscI | ACATGT | 1 cut(s) | 963 |
| Psp6I | CCWGG | 2 cut(s) | 1067, 1290 |
| PspGI | CCWGG | 2 cut(s) | 1067, 1290 |
| PspN4I | GGNNCC | 4 cut(s) | 176, 201, 244, 448 |
| PspPI | GGNCC | 4 cut(s) | 479, 523, 1246, 1288 |
| PstI | CTGCAG | 1 cut(s) | 1056 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1025, 1051, 1060 |
| PsuI | RGATCY | 1 cut(s) | 446 |
| RsaI | GTAC | 1 cut(s) | 722 |
| RsaNI | GTAC | 1 cut(s) | 721 |
| RseI | CAYNNNNRTG | 1 cut(s) | 551 |
| SatI | GCNGC | 5 cut(s) | 241, 474, 712, 1026, 1061 |
| Sau3AI | GATC | 1 cut(s) | 446 |
| Sau96I | GGNCC | 4 cut(s) | 479, 523, 1246, 1288 |
| SchI | GAGTC | 1 cut(s) | 85 |
| ScrFI | CCNGG | 2 cut(s) | 1069, 1292 |
| SduI | GDGCHC | 2 cut(s) | 204, 1151 |
| SexAI | ACCWGGT | 1 cut(s) | 1067 |
| SfaNI | GCATC | 2 cut(s) | 115, 928 |
| SfcI | CTRYAG | 1 cut(s) | 1052 |
| SinI | GGWCC | 2 cut(s) | 523, 1288 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 551 |
| SmlI | CTYRAG | 2 cut(s) | 512, 776 |
| SmoI | CTYRAG | 2 cut(s) | 512, 776 |
| Sse9I | AATT | 6 cut(s) | 111, 589, 643, 817, 871, 1097 |
| SsiI | CCGC | 3 cut(s) | 96, 240, 714 |
| SspI | AATATT | 1 cut(s) | 917 |
| SspMI | CTAG | 2 cut(s) | 78, 860 |
| StyD4I | CCNGG | 2 cut(s) | 1067, 1290 |
| TaaI | ACNGT | 5 cut(s) | 55, 277, 375, 926, 1303 |
| TaiI | ACGT | 2 cut(s) | 796, 1143 |
| TaqI | TCGA | 3 cut(s) | 155, 619, 1307 |
| TasI | AATT | 6 cut(s) | 111, 589, 643, 817, 871, 1097 |
| TauI | GCSGC | 1 cut(s) | 243 |
| TfiI | GAWTC | 8 cut(s) | 26, 46, 81, 157, 335, 599, 676, 1210 |
| TscAI | CASTG | 4 cut(s) | 510, 752, 931, 1306 |
| TseFI | GTSAC | 1 cut(s) | 812 |
| TseI | GCWGC | 4 cut(s) | 473, 711, 1025, 1060 |
| Tsp45I | GTSAC | 1 cut(s) | 812 |
| TspDTI | ATGAA | 5 cut(s) | 17, 47, 238, 1181, 1218 |
| TspGWI | ACGGA | 2 cut(s) | 686, 1019 |
| TspRI | CASTG | 4 cut(s) | 510, 752, 931, 1306 |
| VpaK11BI | GGWCC | 2 cut(s) | 523, 1288 |
| XapI | RAATTY | 2 cut(s) | 643, 871 |
| XceI | RCATGY | 3 cut(s) | 737, 967, 1352 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 533 |
| XmnI | GAANNNNTTC | 2 cut(s) | 374, 1209 |
| XspI | CTAG | 2 cut(s) | 78, 860 |
| Zsp2I | ATGCAT | 1 cut(s) | 108 |