Rmu_sc0013154.1_g000008

Brca1-associated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013154.1
OG0013575
Physical Location & Seq
Forward (+)
36035 .. 42377
6343 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013154.1_g000008.1.cds

Sequence Viewer

Length: 1692 bp
atgtcgccgagctcgagcacagcacgtgccggagcctcgccggtcgaggccttcaggtcgccgccttccataactcccggcgagcctagcgacttctcctgttcctcctcttcatcctccatctcaaacatcacgcaggcctttcccttctcttctggaaaccctagaattgaagagaccagaggcatcatgctcctctaccgcgacgatgacgtcgtctcgttctctccgtctaatcttcctgttgaaaggaagccgcttgtttgcgtacttggagtgccgaatcacatgacatatgctgacttctgtagattctgtggttccttcattcagcatatattggagatgcggattgtcaggaccgatggaatggaggatcgttatagcattttgattaggtttgacagtcaggactccacagatcatttttacaagcacttcaatcggacccggttctcatcactagaggtggaggtctgtcgcatacttttcacagtagatgttcaatacactggttcaatagaacatgcacaggcatccctctgtagctcaactgagcagccatcatgtccagtctgtcttgagagactagaccaagatatgagtggaattctgacaactatctgcaatcattctttccattgctcttgcatttcaaaatggaccgattcttcttgtcctgtatgtcgatattgtcagcagcagcctgaaaagtccaactgtttcatttgtcaaacttctgagaatctctggatgtgtattatctgtggctttgttggttgtgggaggtataaagaagggcatgccataagacattggaaagaaacacaacattgctattcccttgaagtggaaacgcagcgtgtgtgggattatgcaggagacaattatgttcaccgcctaattcaatctaaaactgatggaaaattggttgaattgaattcacactgtcggaattcgaatgatttcaaaggaagttgcgagtgtgtagattctggattcagtgaggctcttttgaacagtaaagtagaagctattgttaatgagtacaacgaactgcttgctactcaacttgagaaccaaaaaatgtattttgaattgctacttcaagaagttaaagaaggaagtgagagagaaatgtctaaagctgtagaaaaggctgtgccagtaaagaaaatgcaggacaagctggatagatgtgtaaatgagaagaaatttctggatgagcttaatgataatcttttgaaaaatcgagaagcttggaaagcaaagatacttgaagttgaagagagggagagaaaggcttcgaagctgaaggaagataaaataagcaacttagaagagcagctcaggaatttgatgctgtacctcgagacagggaatacagtagagtcttcaaatgaaacaaagaatgataatgtcttgccacccagcgccagttcgctggatctggcgaccaatctccactacgacaacatgctcttcgtcaaaatcgacgccgtctacgctgcccccagcgccagttcgccggatctggcgaccaatctccactacgacaacatgctcttcgtcaaaatcgacgccgtctacgctgccgtcggatccctaggatacgagaagcttccggttcacatctccgaggtcgtcgaccacctcttcgctctcactgatctcacccatactgaacaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
BRAP2 zf-RING_2 zf-UBP

Protein Analysis

563

Amino Acids

63.7

Weight (kDa)

5.24

Isoelectric Point (pI)

49.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013575)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G26000 AT2G26000 AT2G26000
fragaria_vesca FvH4_6g29040
malus_domestica MD17G1218900.v1.1
prunus_persica Prupe.3G094400_v2.0.a1 Prupe.3G094400_v2.0.a1
pyrus_communis pycom17g22370
rosa_chinensis RchiOBHm_Chr2g0133711
rosa_laevigata RLG00000019358
rosa_multiflora Rmu_sc0013154.1_g000008
rosa_roxburghii Rroxscaffold_2G00110880
rosa_rugosa Rorug02G0313200
rosa_samantha Rh2AG366600 Rh2BG372300 Rh2CG349900 Rh2DG389200
rosa_wichuraiana Rw2G029830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 212
AatII GACGTC 1 cut(s) 216
AccI GTMKAC 3 cut(s) 1503, 1587, 1647
AccII CGCG 1 cut(s) 204
AciI CCGC 5 cut(s) 62, 202, 257, 349, 898
AclWI GGATC 5 cut(s) 384, 1455, 1539, 1596, 1609
AcsI RAATTY 5 cut(s) 609, 940, 955, 1214, 1354
AcuI CTGAAG 2 cut(s) 37, 1334
AcvI CACGTG 1 cut(s) 26
AcyI GRCGYC 3 cut(s) 213, 1497, 1581
AfaI GTAC 3 cut(s) 270, 1049, 1367
AfiI CCNNNNNNNGG 1 cut(s) 850
Alw21I GWGCWC 2 cut(s) 14, 20
Alw26I GTCTC 5 cut(s) 170, 223, 580, 876, 1367
AlwI GGATC 5 cut(s) 384, 1455, 1539, 1596, 1609
Ama87I CYCGRG 2 cut(s) 13, 1370
AoxI GGCC 2 cut(s) 48, 138
ApeKI GCWGC 7 cut(s) 559, 700, 703, 859, 1345, 1508, 1592
ApoI RAATTY 5 cut(s) 609, 940, 955, 1214, 1354
ArsI GACNNNNNNTTYG 2 cut(s) 1640, 1672
Asp700I GAANNNNTTC 2 cut(s) 965, 1303
AspA2I CCTAGG 1 cut(s) 1606
AspLEI GCGC 2 cut(s) 1436, 1520
AspS9I GGNCC 3 cut(s) 360, 447, 663
AsuC2I CCSGG 2 cut(s) 78, 451
AsuHPI GGTGA 2 cut(s) 887, 1666
AsuII TTCGAA 2 cut(s) 959, 1307
AvaI CYCGRG 2 cut(s) 13, 1370
AvaII GGWCC 3 cut(s) 360, 447, 663
AvrII CCTAGG 1 cut(s) 1606
BamHI GGATCC 1 cut(s) 1601
BanII GRGCYC 1 cut(s) 14
BbrPI CACGTG 1 cut(s) 26
BbsI GAAGAC 1 cut(s) 1386
Bbv12I GWGCWC 2 cut(s) 14, 20
BbvI GCAGC 7 cut(s) 571, 712, 715, 871, 1357, 1495, 1579
BccI CCATC 4 cut(s) 128, 359, 571, 914
BceAI ACGGC 3 cut(s) 1484, 1568, 1580
BcgI CGANNNNNNTGC 4 cut(s) 425, 459, 1043, 1077
BciVI GTATCC 1 cut(s) 1604
BcnI CCSGG 2 cut(s) 78, 451
BcoDI GTCTC 5 cut(s) 170, 223, 580, 876, 1367
BfaI CTAG 5 cut(s) 87, 165, 464, 590, 1607
BfmI CTRYAG 3 cut(s) 307, 544, 1149
BfoI RGCGCY 2 cut(s) 1437, 1521
BfuI GTATCC 1 cut(s) 1604
BisI GCNGC 9 cut(s) 62, 257, 560, 701, 704, 860, 1346, 1509, 1593
BlnI CCTAGG 1 cut(s) 1606
BlsI GCNGC 9 cut(s) 63, 258, 561, 702, 705, 861, 1347, 1510, 1594
Bme1390I CCNGG 2 cut(s) 78, 451
Bme18I GGWCC 3 cut(s) 360, 447, 663
BmeT110I CYCGRG 2 cut(s) 13, 1370
BmgT120I GGNCC 3 cut(s) 360, 447, 663
BmiI GGNNCC 4 cut(s) 34, 322, 449, 1603
BmrFI CCNGG 2 cut(s) 78, 451
BmsI GCATC 4 cut(s) 195, 336, 545, 1350
BpiI GAAGAC 1 cut(s) 1386
Bpu10I CCTNAGC 1 cut(s) 1349
Bpu14I TTCGAA 2 cut(s) 959, 1307
BpuEI CTTGAG 2 cut(s) 602, 1094
BpuMI CCSGG 2 cut(s) 78, 451
BsaAI YACGTR 1 cut(s) 26
BsaHI GRCGYC 3 cut(s) 213, 1497, 1581
BsaI GGTCTC 1 cut(s) 170
BsaJI CCNNGG 2 cut(s) 1606, 1638
BsaWI WCCGGW 1 cut(s) 1624
Bsc4I CCNNNNNNNGG 1 cut(s) 850
Bse118I RCCGGY 1 cut(s) 40
Bse1I ACTGG 5 cut(s) 517, 572, 1166, 1437, 1521
Bse3DI GCAATG 2 cut(s) 640, 832
BseDI CCNNGG 2 cut(s) 1606, 1638
BseGI GGATG 4 cut(s) 113, 536, 759, 1228
BseLI CCNNNNNNNGG 1 cut(s) 850
BseMI GCAATG 2 cut(s) 640, 832
BseMII CTCAG 3 cut(s) 546, 732, 1363
BseNI ACTGG 5 cut(s) 517, 572, 1166, 1437, 1521
BseRI GAGGAG 2 cut(s) 97, 185
BseXI GCAGC 7 cut(s) 571, 712, 715, 871, 1357, 1495, 1579
BseYI CCCAGC 2 cut(s) 1430, 1514
Bsh1236I CGCG 1 cut(s) 204
Bsh1285I CGRYCG 1 cut(s) 45
BshFI GGCC 2 cut(s) 50, 140
BsiEI CGRYCG 1 cut(s) 45
BsiHKAI GWGCWC 2 cut(s) 14, 20
BsiHKCI CYCGRG 2 cut(s) 13, 1370
BsiSI CCGG 6 cut(s) 30, 41, 78, 451, 1529, 1625
BslI CCNNNNNNNGG 1 cut(s) 850
BsmAI GTCTC 5 cut(s) 170, 223, 580, 876, 1367
BsmBI CGTCTC 1 cut(s) 223
BsnI GGCC 2 cut(s) 50, 140
Bso31I GGTCTC 1 cut(s) 170
BsoBI CYCGRG 2 cut(s) 13, 1370
Bsp119I TTCGAA 2 cut(s) 959, 1307
Bsp1286I GDGCHC 2 cut(s) 14, 20
Bsp143I GATC 6 cut(s) 376, 421, 1447, 1531, 1601, 1669
BspACI CCGC 5 cut(s) 62, 202, 257, 349, 898
BspANI GGCC 2 cut(s) 50, 140
BspCNI CTCAG 3 cut(s) 547, 733, 1362
BspFNI CGCG 1 cut(s) 204
BspLI GGNNCC 4 cut(s) 34, 322, 449, 1603
BspPI GGATC 5 cut(s) 384, 1455, 1539, 1596, 1609
BspQI GCTCTTC 3 cut(s) 1335, 1487, 1571
BspT104I TTCGAA 2 cut(s) 959, 1307
BspTNI GGTCTC 1 cut(s) 170
BsrDI GCAATG 2 cut(s) 640, 832
BsrFI RCCGGY 1 cut(s) 40
BsrI ACTGG 5 cut(s) 517, 572, 1166, 1437, 1521
BssAI RCCGGY 1 cut(s) 40
BssECI CCNNGG 2 cut(s) 1606, 1638
BssMI GATC 6 cut(s) 376, 421, 1447, 1531, 1601, 1669
BssNI GRCGYC 3 cut(s) 213, 1497, 1581
BssT1I CCWWGG 1 cut(s) 1606
Bst4CI ACNGT 6 cut(s) 407, 496, 722, 950, 1022, 1387
Bst6I CTCTTC 8 cut(s) 115, 157, 168, 1281, 1335, 1487, 1571, 1661
BstACI GRCGYC 3 cut(s) 213, 1497, 1581
BstBAI YACGTR 1 cut(s) 26
BstBI TTCGAA 2 cut(s) 959, 1307
BstC8I GCNNGC 4 cut(s) 83, 138, 804, 1062
BstDEI CTNAG 4 cut(s) 555, 741, 1336, 1349
BstF5I GGATG 4 cut(s) 113, 536, 759, 1228
BstFNI CGCG 1 cut(s) 204
BstH2I RGCGCY 2 cut(s) 1437, 1521
BstHHI GCGC 2 cut(s) 1436, 1520
BstKTI GATC 6 cut(s) 379, 424, 1450, 1534, 1604, 1672
BstMAI GTCTC 5 cut(s) 170, 223, 580, 876, 1367
BstMBI GATC 6 cut(s) 376, 421, 1447, 1531, 1601, 1669
BstMCI CGRYCG 1 cut(s) 45
BstMWI GCNNNNNNNGC 6 cut(s) 87, 1186, 1265, 1505, 1517, 1589
BstNSI RCATGY 4 cut(s) 530, 806, 1480, 1564
BstSCI CCNGG 2 cut(s) 76, 449
BstSFI CTRYAG 3 cut(s) 307, 544, 1149
BstUI CGCG 1 cut(s) 204
BstV1I GCAGC 7 cut(s) 571, 712, 715, 871, 1357, 1495, 1579
BstV2I GAAGAC 1 cut(s) 1386
BstX2I RGATCY 3 cut(s) 1447, 1531, 1601
BstXI CCANNNNNNTGG 1 cut(s) 1444
BstYI RGATCY 3 cut(s) 1447, 1531, 1601
BsuI GTATCC 1 cut(s) 1604
BsuRI GGCC 2 cut(s) 50, 140
BtsCI GGATG 4 cut(s) 113, 536, 759, 1228
BtsIMutI CAGTG 4 cut(s) 510, 946, 1009, 1665
Cac8I GCNNGC 4 cut(s) 83, 138, 804, 1062
CfoI GCGC 2 cut(s) 1436, 1520
Cfr10I RCCGGY 1 cut(s) 40
Cfr13I GGNCC 3 cut(s) 360, 447, 663
CseI GACGC 2 cut(s) 1505, 1589
Csp6I GTAC 3 cut(s) 269, 1048, 1366
CviAII CATG 7 cut(s) 190, 289, 527, 567, 803, 1477, 1561
CviQI GTAC 3 cut(s) 269, 1048, 1366
DdeI CTNAG 4 cut(s) 555, 741, 1336, 1349
DpnI GATC 6 cut(s) 378, 423, 1449, 1533, 1603, 1671
DpnII GATC 6 cut(s) 376, 421, 1447, 1531, 1601, 1669
DrdI GACNNNNNNGTC 1 cut(s) 212
DseDI GACNNNNNNGTC 1 cut(s) 212
Eam1104I CTCTTC 8 cut(s) 115, 157, 168, 1281, 1335, 1487, 1571, 1661
EarI CTCTTC 8 cut(s) 115, 157, 168, 1281, 1335, 1487, 1571, 1661
Ecl136II GAGCTC 1 cut(s) 12
Eco130I CCWWGG 1 cut(s) 1606
Eco147I AGGCCT 2 cut(s) 50, 140
Eco24I GRGCYC 1 cut(s) 14
Eco31I GGTCTC 1 cut(s) 170
Eco47I GGWCC 3 cut(s) 360, 447, 663
Eco53kI GAGCTC 1 cut(s) 12
Eco57I CTGAAG 2 cut(s) 37, 1334
Eco72I CACGTG 1 cut(s) 26
Eco88I CYCGRG 2 cut(s) 13, 1370
EcoICRI GAGCTC 1 cut(s) 12
EcoRI GAATTC 3 cut(s) 609, 940, 955
EcoT14I CCWWGG 1 cut(s) 1606
EcoT38I GRGCYC 1 cut(s) 14
ErhI CCWWGG 1 cut(s) 1606
Esp3I CGTCTC 1 cut(s) 223
FaeI CATG 7 cut(s) 193, 292, 530, 570, 806, 1480, 1564
FatI CATG 7 cut(s) 189, 288, 526, 566, 802, 1476, 1560
FauNDI CATATG 1 cut(s) 295
FblI GTMKAC 3 cut(s) 1503, 1587, 1647
Fnu4HI GCNGC 9 cut(s) 62, 257, 560, 701, 704, 860, 1346, 1509, 1593
FokI GGATG 4 cut(s) 100, 523, 766, 1235
FriOI GRGCYC 1 cut(s) 14
Fsp4HI GCNGC 9 cut(s) 62, 257, 560, 701, 704, 860, 1346, 1509, 1593
FspBI CTAG 5 cut(s) 87, 165, 464, 590, 1607
GlaI GCGC 2 cut(s) 1435, 1519
GluI GCNGC 9 cut(s) 62, 257, 560, 701, 704, 860, 1346, 1509, 1593
GsaI CCCAGC 2 cut(s) 1434, 1518
HaeII RGCGCY 2 cut(s) 1437, 1521
HaeIII GGCC 2 cut(s) 50, 140
HapII CCGG 6 cut(s) 30, 41, 78, 451, 1529, 1625
HgaI GACGC 2 cut(s) 1505, 1589
HhaI GCGC 2 cut(s) 1436, 1520
Hin1I GRCGYC 3 cut(s) 213, 1497, 1581
Hin1II CATG 7 cut(s) 193, 292, 530, 570, 806, 1480, 1564
Hin6I GCGC 2 cut(s) 1434, 1518
HinP1I GCGC 2 cut(s) 1434, 1518
HincII GTYRAC 1 cut(s) 1648
HindII GTYRAC 1 cut(s) 1648
HindIII AAGCTT 2 cut(s) 1257, 1619
HinfI GANTC 8 cut(s) 283, 312, 413, 668, 745, 992, 999, 1391
HpaII CCGG 6 cut(s) 30, 41, 78, 451, 1529, 1625
HphI GGTGA 2 cut(s) 887, 1666
Hpy166II GTNNAC 5 cut(s) 895, 1504, 1588, 1630, 1648
Hpy188I TCNGA 6 cut(s) 447, 615, 742, 954, 1601, 1639
Hpy8I GTNNAC 5 cut(s) 895, 1504, 1588, 1630, 1648
Hpy99I CGWCG 6 cut(s) 209, 218, 1499, 1583, 1601, 1649
HpyAV CCTTC 7 cut(s) 61, 75, 157, 334, 791, 1115, 1309
HpyCH4III ACNGT 6 cut(s) 407, 496, 722, 950, 1022, 1387
HpyCH4IV ACGT 2 cut(s) 25, 213
HpyCH4V TGCA 5 cut(s) 530, 627, 651, 878, 1180
HpyF10VI GCNNNNNNNGC 6 cut(s) 87, 1186, 1265, 1505, 1517, 1589
HpyF3I CTNAG 4 cut(s) 555, 741, 1336, 1349
HpySE526I ACGT 2 cut(s) 25, 213
Hsp92I GRCGYC 3 cut(s) 213, 1497, 1581
Hsp92II CATG 7 cut(s) 193, 292, 530, 570, 806, 1480, 1564
HspAI GCGC 2 cut(s) 1434, 1518
Kzo9I GATC 6 cut(s) 376, 421, 1447, 1531, 1601, 1669
LguI GCTCTTC 3 cut(s) 1335, 1487, 1571
LmnI GCTCC 2 cut(s) 32, 198
Lsp1109I GCAGC 7 cut(s) 571, 712, 715, 871, 1357, 1495, 1579
LweI GCATC 4 cut(s) 195, 336, 545, 1350
MaeI CTAG 5 cut(s) 87, 165, 464, 590, 1607
MaeII ACGT 2 cut(s) 25, 213
MalI GATC 6 cut(s) 378, 423, 1449, 1533, 1603, 1671
MboI GATC 6 cut(s) 376, 421, 1447, 1531, 1601, 1669
MflI RGATCY 3 cut(s) 1447, 1531, 1601
MhlI GDGCHC 2 cut(s) 14, 20
MlyI GAGTC 2 cut(s) 407, 1400
MmeI TCCRAC 3 cut(s) 741, 932, 1579
MroXI GAANNNNTTC 2 cut(s) 965, 1303
MseI TTAA 3 cut(s) 1041, 1116, 1230
MspI CCGG 6 cut(s) 30, 41, 78, 451, 1529, 1625
MspR9I CCNGG 2 cut(s) 78, 451
MvnI CGCG 1 cut(s) 204
MwoI GCNNNNNNNGC 6 cut(s) 87, 1186, 1265, 1505, 1517, 1589
NciI CCSGG 2 cut(s) 78, 451
NdeI CATATG 1 cut(s) 295
NdeII GATC 6 cut(s) 376, 421, 1447, 1531, 1601, 1669
NlaIII CATG 7 cut(s) 193, 292, 530, 570, 806, 1480, 1564
NlaIV GGNNCC 4 cut(s) 34, 322, 449, 1603
NmeAIII GCCGAG 1 cut(s) 33
NspI RCATGY 4 cut(s) 530, 806, 1480, 1564
NspV TTCGAA 2 cut(s) 959, 1307
PaeI GCATGC 1 cut(s) 806
PaeR7I CTCGAG 2 cut(s) 13, 1370
PceI AGGCCT 2 cut(s) 50, 140
PciSI GCTCTTC 3 cut(s) 1335, 1487, 1571
PcsI WCGNNNNNNNCGW 5 cut(s) 11, 213, 227, 1491, 1575
PdmI GAANNNNTTC 2 cut(s) 965, 1303
PfeI GAWTC 6 cut(s) 283, 312, 668, 745, 992, 999
PflFI GACNNNGTC 3 cut(s) 215, 1499, 1583
PkrI GCNGC 9 cut(s) 63, 258, 561, 702, 705, 861, 1347, 1510, 1594
PleI GAGTC 2 cut(s) 407, 1399
PmaCI CACGTG 1 cut(s) 26
PmlI CACGTG 1 cut(s) 26
PpsI GAGTC 2 cut(s) 407, 1399
Ppu21I YACGTR 1 cut(s) 26
Psp124BI GAGCTC 1 cut(s) 14
PspCI CACGTG 1 cut(s) 26
PspFI CCCAGC 2 cut(s) 1430, 1514
PspN4I GGNNCC 4 cut(s) 34, 322, 449, 1603
PspPI GGNCC 3 cut(s) 360, 447, 663
PspXI VCTCGAGB 1 cut(s) 13
PsuI RGATCY 3 cut(s) 1447, 1531, 1601
PsyI GACNNNGTC 3 cut(s) 215, 1499, 1583
RsaI GTAC 3 cut(s) 270, 1049, 1367
RsaNI GTAC 3 cut(s) 269, 1048, 1366
SacI GAGCTC 1 cut(s) 14
SalI GTCGAC 1 cut(s) 1646
SapI GCTCTTC 3 cut(s) 1335, 1487, 1571
SaqAI TTAA 3 cut(s) 1041, 1116, 1230
SatI GCNGC 9 cut(s) 62, 257, 560, 701, 704, 860, 1346, 1509, 1593
Sau3AI GATC 6 cut(s) 376, 421, 1447, 1531, 1601, 1669
Sau96I GGNCC 3 cut(s) 360, 447, 663
SchI GAGTC 2 cut(s) 407, 1400
ScrFI CCNGG 2 cut(s) 78, 451
SduI GDGCHC 2 cut(s) 14, 20
SfaNI GCATC 4 cut(s) 195, 336, 545, 1350
SfcI CTRYAG 3 cut(s) 307, 544, 1149
Sfr274I CTCGAG 2 cut(s) 13, 1370
SfuI TTCGAA 2 cut(s) 959, 1307
SinI GGWCC 3 cut(s) 360, 447, 663
SlaI CTCGAG 2 cut(s) 13, 1370
SmlI CTYRAG 4 cut(s) 13, 581, 1073, 1370
SmoI CTYRAG 4 cut(s) 13, 581, 1073, 1370
SphI GCATGC 1 cut(s) 806
SseBI AGGCCT 2 cut(s) 50, 140
SsiI CCGC 5 cut(s) 62, 202, 257, 349, 898
SspMI CTAG 5 cut(s) 87, 165, 464, 590, 1607
SstI GAGCTC 1 cut(s) 14
StuI AGGCCT 2 cut(s) 50, 140
StyD4I CCNGG 2 cut(s) 76, 449
StyI CCWWGG 1 cut(s) 1606
TaaI ACNGT 6 cut(s) 407, 496, 722, 950, 1022, 1387
TaiI ACGT 2 cut(s) 28, 216
TaqII GACCGA 2 cut(s) 377, 680
TatI WGTACW 1 cut(s) 1047
TauI GCSGC 2 cut(s) 64, 259
TfiI GAWTC 6 cut(s) 283, 312, 668, 745, 992, 999
Tru1I TTAA 3 cut(s) 1041, 1116, 1230
Tru9I TTAA 3 cut(s) 1041, 1116, 1230
TscAI CASTG 4 cut(s) 517, 953, 1009, 1672
TseI GCWGC 7 cut(s) 559, 700, 703, 859, 1345, 1508, 1592
TspDTI ATGAA 4 cut(s) 102, 316, 715, 1416
TspGWI ACGGA 1 cut(s) 219
TspRI CASTG 4 cut(s) 517, 953, 1009, 1672
Tth111I GACNNNGTC 3 cut(s) 215, 1499, 1583
VpaK11BI GGWCC 3 cut(s) 360, 447, 663
XapI RAATTY 5 cut(s) 609, 940, 955, 1214, 1354
XceI RCATGY 4 cut(s) 530, 806, 1480, 1564
XcmI CCANNNNNNNNNTGG 1 cut(s) 602
XhoI CTCGAG 2 cut(s) 13, 1370
XmaJI CCTAGG 1 cut(s) 1606
XmiI GTMKAC 3 cut(s) 1503, 1587, 1647
XmnI GAANNNNTTC 2 cut(s) 965, 1303
XspI CTAG 5 cut(s) 87, 165, 464, 590, 1607
ZraI GACGTC 1 cut(s) 214
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.