AT2G26550
NAC Family

inactive heme oxygenase 2, chloroplastic

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0009205
Physical Location & Seq
Reverse (-)
11291148 .. 11293575
2428 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G26550.4

Sequence Viewer

Length: 1065 bp
ATGGCTTCTCTTCTCAGGCCAACTCCATTACTCTCTACACCTCGTAAGCTCACTCACTCTCATCTTCACACATCTATCTCTTTCCCATTCCAAATCTCAACTCAGAGAAAGCCACAAAAGCATCTTCTCAATCTATGTCGTTCGACACCAACACCGTCACAACAAAAGGCCTCACAGAGGAAGAGAACAAGGTACAGGAAACAATACCCAGGAGAAAACATTGGTATAACTGAGGAAATGAGATTCGTCGCCATGAGATTACGCAATGTTAATGGTAAAAAATTAGATCTTTCTGAAGATAAAACTGACACCGAGAAGGAAGAAGAAGAAGAAGAAGAAGACGATGATGATGATGATGAAGTAAAGGAAGAGACTTGGAAGCCTAGCAAAGAAGGGTTTCTTAAGTACTTAGTTGATAGCAAGCTTGTCTTCGATACTATTGAACGAATTGTTGACGAATCTGAGAATGTGTCTTATGCTTACTTTAGGAGAACAGGATTAGAGAGATGTGAAAGTATTGAGAAGGATCTACAATGGTTAAGAGAACAAGATTTGGTTATACCAGAACCAAGTAATGTAGGAGTTTCTTATGCAAAGTATTTGGAAGAACAAGCAGGAGAAAGTGCTCCTTTGTTTCTTTCTCATTTCTACAGTATCTACTTTTCACATATTGCTGGTGGTCAAGTTCTTGTAAGACAGGAGAGTTCGATTTATCGGGAGTTTTGCTGGTTTTTAGTATACTTTTCACACATTGCTGGTGGTCAAGTTATTTGTAAGACAGCTAGTTTGATAGAGTTAGAGATTGATATAGATATAGTGGATTCAGGAGAGTTGGGTTTATCGGGAGTTTTGCGGTTATGGTGGGTATCTGAGAAACTTCTGGAAGGAAAGGAGCTGGAGTTCAATAGGTGGGAAGGGGATGCACAAGACTTGCTTAAAGGCGTCCGTGAGAAGCTTAACGTGCTTGGGGAGCACTGGAGTCGGGACGAGAAGAACAAATGCTTGAAGGAAACGGCAAAGGCATTTAAGTATATGGGGCAGATAGTTCGCTTGATCATCTTGTAA

Protein Analysis

354

Amino Acids

41.16

Weight (kDa)

5.42

Isoelectric Point (pI)

49.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Heme_oxygenase PF01126 129 - 265 1.7e-08 Heme oxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009205)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G26550 AT2G26550 AT2G26550 AT2G26550
fragaria_vesca FvH4_2g34841 FvH4_2g34841 FvH4_2g34841 FvH4_2g34841 FvH4_2g34841
malus_domestica MD15G1086700.v1.1
prunus_persica Prupe.1G440300_v2.0.a1
pyrus_communis pycom15g08160
rosa_chinensis RchiOBHm_Chr6g0307211
rosa_laevigata RLG00000010727
rosa_multiflora Rmu_sc0041325.1_g000001
rosa_roxburghii Rroxscaffold_7G00161080
rosa_rugosa Rorug06G0357700
rosa_samantha Rh6AG468300 Rh6BG432200 Rh6CG483500 Rh6DG470100
rosa_wichuraiana Rw6G040800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 738
AciI CCGC 1 cut(s) 853
AclWI GGATC 1 cut(s) 534
AcuI CTGAAG 1 cut(s) 315
AcyI GRCGYC 1 cut(s) 942
AfaI GTAC 2 cut(s) 194, 407
AfiI CCNNNNNNNGG 1 cut(s) 177
AflII CTTAAG 1 cut(s) 401
AgsI TTSAA 3 cut(s) 443, 904, 1006
AjnI CCWGG 1 cut(s) 208
AloI GAACNNNNNNTCC 2 cut(s) 884, 916
AluBI AGCT 5 cut(s) 49, 424, 782, 895, 955
AluI AGCT 5 cut(s) 49, 424, 782, 895, 955
Alw21I GWGCWC 2 cut(s) 628, 975
Alw26I GTCTC 1 cut(s) 365
AlwI GGATC 1 cut(s) 534
AoxI GGCC 2 cut(s) 17, 168
ArsI GACNNNNNNTTYG 2 cut(s) 769, 801
Asp700I GAANNNNTTC 1 cut(s) 396
BbsI GAAGAC 2 cut(s) 345, 421
Bbv12I GWGCWC 2 cut(s) 628, 975
BceAI ACGGC 1 cut(s) 1029
BcgI CGANNNNNNTGC 4 cut(s) 962, 996, 1028, 1062
BciT130I CCWGG 1 cut(s) 210
BclI TGATCA 1 cut(s) 1053
BcoDI GTCTC 1 cut(s) 365
BfaI CTAG 2 cut(s) 384, 783
BfmI CTRYAG 1 cut(s) 649
BfrI CTTAAG 1 cut(s) 401
BglII AGATCT 1 cut(s) 286
BmcAI AGTACT 1 cut(s) 407
Bme1390I CCNGG 1 cut(s) 210
BmrFI CCNGG 1 cut(s) 210
BmsI GCATC 2 cut(s) 130, 910
BpiI GAAGAC 2 cut(s) 345, 421
BpmI CTGGAG 2 cut(s) 917, 997
BsaHI GRCGYC 1 cut(s) 942
BsaJI CCNNGG 1 cut(s) 208
BsaXI ACNNNNNCTCC 2 cut(s) 884, 914
Bsc4I CCNNNNNNNGG 1 cut(s) 177
Bse1I ACTGG 1 cut(s) 980
Bse3DI GCAATG 2 cut(s) 271, 750
BseBI CCWGG 1 cut(s) 210
BseDI CCNNGG 1 cut(s) 208
BseGI GGATG 1 cut(s) 925
BseLI CCNNNNNNNGG 1 cut(s) 177
BseMI GCAATG 2 cut(s) 271, 750
BseMII CTCAG 5 cut(s) 28, 116, 222, 453, 861
BseNI ACTGG 1 cut(s) 980
BshFI GGCC 2 cut(s) 19, 170
BsiHKAI GWGCWC 2 cut(s) 628, 975
BslFI GGGAC 1 cut(s) 998
BslI CCNNNNNNNGG 1 cut(s) 177
BsmAI GTCTC 1 cut(s) 365
BsmFI GGGAC 1 cut(s) 998
BsnI GGCC 2 cut(s) 19, 170
Bsp1286I GDGCHC 2 cut(s) 628, 975
Bsp143I GATC 3 cut(s) 286, 526, 1053
BspACI CCGC 1 cut(s) 853
BspANI GGCC 2 cut(s) 19, 170
BspCNI CTCAG 5 cut(s) 27, 115, 223, 454, 862
BspPI GGATC 1 cut(s) 534
BspTI CTTAAG 1 cut(s) 401
BsrDI GCAATG 2 cut(s) 271, 750
BsrI ACTGG 1 cut(s) 980
BssECI CCNNGG 1 cut(s) 208
BssMI GATC 3 cut(s) 286, 526, 1053
BssNAI GTATAC 1 cut(s) 739
BssNI GRCGYC 1 cut(s) 942
Bst1107I GTATAC 1 cut(s) 739
Bst2UI CCWGG 1 cut(s) 210
Bst4CI ACNGT 2 cut(s) 156, 653
Bst6I CTCTTC 3 cut(s) 15, 176, 363
BstACI GRCGYC 1 cut(s) 942
BstAFI CTTAAG 1 cut(s) 401
BstC8I GCNNGC 1 cut(s) 422
BstDEI CTNAG 6 cut(s) 14, 102, 231, 409, 462, 870
BstENI CCTNNNNNAGG 1 cut(s) 175
BstF5I GGATG 1 cut(s) 925
BstKTI GATC 3 cut(s) 289, 529, 1056
BstMAI GTCTC 1 cut(s) 365
BstMBI GATC 3 cut(s) 286, 526, 1053
BstMWI GCNNNNNNNGC 3 cut(s) 118, 961, 970
BstNI CCWGG 1 cut(s) 210
BstSCI CCNGG 1 cut(s) 208
BstSFI CTRYAG 1 cut(s) 649
BstV2I GAAGAC 2 cut(s) 345, 421
BstX2I RGATCY 2 cut(s) 286, 526
BstYI RGATCY 2 cut(s) 286, 526
BstZ17I GTATAC 1 cut(s) 739
BsuRI GGCC 2 cut(s) 19, 170
BtsCI GGATG 1 cut(s) 925
BtsIMutI CAGTG 1 cut(s) 973
Cac8I GCNNGC 1 cut(s) 422
CseI GACGC 1 cut(s) 931
Csp6I GTAC 2 cut(s) 193, 406
CviAII CATG 1 cut(s) 253
CviQI GTAC 2 cut(s) 193, 406
DdeI CTNAG 6 cut(s) 14, 102, 231, 409, 462, 870
DpnI GATC 3 cut(s) 288, 528, 1055
DpnII GATC 3 cut(s) 286, 526, 1053
Eam1104I CTCTTC 3 cut(s) 15, 176, 363
EarI CTCTTC 3 cut(s) 15, 176, 363
Eco147I AGGCCT 1 cut(s) 170
Eco57I CTGAAG 1 cut(s) 315
EcoNI CCTNNNNNAGG 1 cut(s) 175
EcoRII CCWGG 1 cut(s) 208
FaeI CATG 1 cut(s) 256
FalI AAGNNNNNCTT 8 cut(s) 384, 416, 413, 445, 613, 645, 918, 950
FaqI GGGAC 1 cut(s) 998
FatI CATG 1 cut(s) 252
FbaI TGATCA 1 cut(s) 1053
FblI GTMKAC 1 cut(s) 738
FokI GGATG 1 cut(s) 932
FspBI CTAG 2 cut(s) 384, 783
GsuI CTGGAG 2 cut(s) 917, 997
HaeIII GGCC 2 cut(s) 19, 170
HgaI GACGC 1 cut(s) 931
Hin1I GRCGYC 1 cut(s) 942
Hin1II CATG 1 cut(s) 256
HincII GTYRAC 1 cut(s) 454
HindII GTYRAC 1 cut(s) 454
HindIII AAGCTT 2 cut(s) 422, 953
HinfI GANTC 4 cut(s) 243, 458, 821, 979
Hpy166II GTNNAC 2 cut(s) 454, 739
Hpy188I TCNGA 4 cut(s) 105, 295, 463, 871
Hpy188III TCNNGA 5 cut(s) 716, 825, 843, 881, 983
Hpy8I GTNNAC 2 cut(s) 454, 739
Hpy99I CGWCG 1 cut(s) 251
HpyAV CCTTC 6 cut(s) 310, 386, 517, 878, 908, 1000
HpyCH4III ACNGT 2 cut(s) 156, 653
HpyCH4IV ACGT 1 cut(s) 960
HpyCH4V TGCA 2 cut(s) 593, 923
HpyF10VI GCNNNNNNNGC 3 cut(s) 118, 961, 970
HpyF3I CTNAG 6 cut(s) 14, 102, 231, 409, 462, 870
HpySE526I ACGT 1 cut(s) 960
Hsp92I GRCGYC 1 cut(s) 942
Hsp92II CATG 1 cut(s) 256
Ksp22I TGATCA 1 cut(s) 1053
Kzo9I GATC 3 cut(s) 286, 526, 1053
LmnI GCTCC 3 cut(s) 631, 892, 970
LweI GCATC 2 cut(s) 130, 910
MaeI CTAG 2 cut(s) 384, 783
MaeII ACGT 1 cut(s) 960
MaeIII GTNAC 1 cut(s) 156
MalI GATC 3 cut(s) 288, 528, 1055
MboI GATC 3 cut(s) 286, 526, 1053
MflI RGATCY 2 cut(s) 286, 526
MhlI GDGCHC 2 cut(s) 628, 975
MluCI AATT 2 cut(s) 281, 447
MlyI GAGTC 1 cut(s) 988
MnlI CCTC 4 cut(s) 51, 171, 181, 226
MroXI GAANNNNTTC 1 cut(s) 396
MseI TTAA 6 cut(s) 270, 402, 539, 936, 957, 1026
MspCI CTTAAG 1 cut(s) 401
MspR9I CCNGG 1 cut(s) 210
MvaI CCWGG 1 cut(s) 210
MwoI GCNNNNNNNGC 3 cut(s) 118, 961, 970
NdeII GATC 3 cut(s) 286, 526, 1053
NlaIII CATG 1 cut(s) 256
NmuCI GTSAC 1 cut(s) 156
PceI AGGCCT 1 cut(s) 170
PdmI GAANNNNTTC 1 cut(s) 396
PfeI GAWTC 3 cut(s) 243, 458, 821
PleI GAGTC 1 cut(s) 987
PpsI GAGTC 1 cut(s) 987
Psp6I CCWGG 1 cut(s) 208
PspGI CCWGG 1 cut(s) 208
PsuI RGATCY 2 cut(s) 286, 526
RsaI GTAC 2 cut(s) 194, 407
RsaNI GTAC 2 cut(s) 193, 406
SaqAI TTAA 6 cut(s) 270, 402, 539, 936, 957, 1026
Sau3AI GATC 3 cut(s) 286, 526, 1053
ScaI AGTACT 1 cut(s) 407
SchI GAGTC 1 cut(s) 988
ScrFI CCNGG 1 cut(s) 210
SduI GDGCHC 2 cut(s) 628, 975
SetI ASST 9 cut(s) 43, 51, 194, 426, 784, 897, 911, 957, 963
SfaNI GCATC 2 cut(s) 130, 910
SfcI CTRYAG 1 cut(s) 649
SmlI CTYRAG 1 cut(s) 401
SmoI CTYRAG 1 cut(s) 401
Sse9I AATT 2 cut(s) 281, 447
SseBI AGGCCT 1 cut(s) 170
SsiI CCGC 1 cut(s) 853
SspMI CTAG 2 cut(s) 384, 783
StuI AGGCCT 1 cut(s) 170
StyD4I CCNGG 1 cut(s) 208
TaaI ACNGT 2 cut(s) 156, 653
TaiI ACGT 1 cut(s) 963
TaqI TCGA 3 cut(s) 143, 432, 707
TasI AATT 2 cut(s) 281, 447
TatI WGTACW 1 cut(s) 405
TfiI GAWTC 3 cut(s) 243, 458, 821
Tru1I TTAA 6 cut(s) 270, 402, 539, 936, 957, 1026
Tru9I TTAA 6 cut(s) 270, 402, 539, 936, 957, 1026
TscAI CASTG 1 cut(s) 980
TseFI GTSAC 1 cut(s) 156
Tsp45I GTSAC 1 cut(s) 156
TspDTI ATGAA 1 cut(s) 372
TspGWI ACGGA 1 cut(s) 935
TspRI CASTG 1 cut(s) 980
Vha464I CTTAAG 1 cut(s) 401
XagI CCTNNNNNAGG 1 cut(s) 175
XmiI GTMKAC 1 cut(s) 738
XmnI GAANNNNTTC 1 cut(s) 396
XspI CTAG 2 cut(s) 384, 783
ZrmI AGTACT 1 cut(s) 407
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.