MD15G1086700.v1.1
NAC Family

inactive heme oxygenase 2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0009205
Physical Location & Seq
Forward (+)
6011966 .. 6014257
2292 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1086700.v1.1.491

Sequence Viewer

Length: 1005 bp
ATGCAAATTATGCAGTGCGCAACGATGTCGTCGTTAATGGAGAAAGCCGTCTCACCATCAATCGCTACTTTCTTCTTTCCGCACCCCCATTCGTCGAATGCCTCAACCATTTCAACCAGAAAGTTTCGTCGTCGAGCCCCGCCGCTCCGCTGCTCCGACTCGAGCGCCGTCGCTTCCACGTCTCTTTCTCCGCCGCCCATTTCGACGGCGAACACCGGTACGGCGCCGCCGGTGGTGAGGAGGAGGATGAGGTACCGGAAGCAGTACCCAGGGGAGAGCAAAGGCATCACTGAGGAGATGAGGTTCGTCGCCATGAAGCTCCGCAACATAAACGGCAAGAAATTGAACACCAACAGTAACAATTCCTCTTCTGATGACGATGACGGCGATGGTGAAAATGACGATAATGCCCCCGTCGAGGACAACAGCTCGGAATCGGATGCCGACGGCGACGGGGGTGAAACGGAGACTTGGCGGCCGAGCTTGGAAGGGTTTATCAAGTACTTGGTGGACAGCAAGCTCGTCTTCGACACCGTCGAGCGCATTGTCGATGAATCGAACGACGTCGCTTATGCATATTTTAGGAAGACTGGATTGGAGAGATCGGAGAGTCTCTCGGAAGATCTCGAATGGTTTAAGCAGCAGGGCAATGTGATTCCAGAACCCAGTAATCCAGGAGTTTCATATGCTAAGTATTTGGAGGGGCTGGCAGAGGAGTCTGCCCCATTGTTCCTCTGCCACTTCTACAACATCTACTTTTCACATATAGCTGGTGGGCAGGTCATTGCAAGACAGGTATCTGAGAAGTTGCTGGAAGGAAGGGAGTTGGCATTTTGCGCATGGGAAGAGGACGTGCAGGAGTTATTGAAAGGTGTTCGTGAGAAGCTCAACAAGCTCGGAGAGCACTGGACGCGAGATGACAAAAACAAATGCTTAAAAGAAACAACAAAATCATTTCGGTATTTGGGGCAGATAGTTCGTTTGATCATCTTGGAGCTCAAGTAA

Protein Analysis

335

Amino Acids

37.56

Weight (kDa)

5.49

Isoelectric Point (pI)

49.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Heme_oxygenase PF01126 165 - 327 6.2e-10 Heme oxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0009205)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G26550 AT2G26550 AT2G26550 AT2G26550
fragaria_vesca FvH4_2g34841 FvH4_2g34841 FvH4_2g34841 FvH4_2g34841 FvH4_2g34841
malus_domestica MD15G1086700.v1.1
prunus_persica Prupe.1G440300_v2.0.a1
pyrus_communis pycom15g08160
rosa_chinensis RchiOBHm_Chr6g0307211
rosa_laevigata RLG00000010727
rosa_multiflora Rmu_sc0041325.1_g000001
rosa_roxburghii Rroxscaffold_7G00161080
rosa_rugosa Rorug06G0357700
rosa_samantha Rh6AG468300 Rh6BG432200 Rh6CG483500 Rh6DG470100
rosa_wichuraiana Rw6G040800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 567
Acc16I TGCGCA 2 cut(s) 19, 838
Acc36I ACCTGC 1 cut(s) 769
Acc65I GGTACC 1 cut(s) 252
AccB1I GGYRCC 2 cut(s) 223, 252
AccBSI CCGCTC 1 cut(s) 145
AccII CGCG 1 cut(s) 913
AciI CCGC 9 cut(s) 80, 140, 143, 148, 191, 194, 227, 322, 475
AcoI YGGCCR 1 cut(s) 476
AcyI GRCGYC 2 cut(s) 224, 564
AfaI GTAC 4 cut(s) 220, 254, 266, 503
AfiI CCNNNNNNNGG 1 cut(s) 418
AgeI ACCGGT 1 cut(s) 215
AgsI TTSAA 3 cut(s) 114, 346, 868
AjiI CACGTC 2 cut(s) 180, 853
AjnI CCWGG 2 cut(s) 268, 673
AjuI GAANNNNNNNTTGG 2 cut(s) 578, 610
AloI GAACNNNNNNTCC 2 cut(s) 287, 319
AluBI AGCT 8 cut(s) 319, 429, 483, 520, 770, 886, 895, 997
AluI AGCT 8 cut(s) 319, 429, 483, 520, 770, 886, 895, 997
Alw21I GWGCWC 2 cut(s) 906, 999
Alw26I GTCTC 4 cut(s) 55, 186, 461, 617
Ama87I CYCGRG 1 cut(s) 160
AoxI GGCC 1 cut(s) 476
ApeKI GCWGC 2 cut(s) 150, 640
AsiGI ACCGGT 1 cut(s) 215
Asp718I GGTACC 1 cut(s) 252
AspLEI GCGC 5 cut(s) 20, 167, 226, 543, 839
AsuHPI GGTGA 4 cut(s) 45, 247, 404, 470
AvaI CYCGRG 1 cut(s) 160
BanI GGYRCC 2 cut(s) 223, 252
BanII GRGCYC 2 cut(s) 139, 999
BbsI GAAGAC 2 cut(s) 517, 593
Bbv12I GWGCWC 2 cut(s) 906, 999
BbvI GCAGC 2 cut(s) 137, 652
BccI CCATC 2 cut(s) 64, 383
BceAI ACGGC 7 cut(s) 32, 152, 222, 237, 349, 400, 463
BcgI CGANNNNNNTGC 4 cut(s) 9, 43, 959, 993
BciT130I CCWGG 2 cut(s) 270, 675
BclI TGATCA 1 cut(s) 984
BcoDI GTCTC 4 cut(s) 55, 186, 461, 617
BfoI RGCGCY 2 cut(s) 168, 227
BfuAI ACCTGC 1 cut(s) 769
BglII AGATCT 1 cut(s) 622
BisI GCNGC 6 cut(s) 143, 151, 194, 227, 476, 641
BlsI GCNGC 6 cut(s) 144, 152, 195, 228, 477, 642
BmcAI AGTACT 1 cut(s) 503
Bme1390I CCNGG 2 cut(s) 270, 675
BmeT110I CYCGRG 1 cut(s) 160
BmgBI CACGTC 2 cut(s) 180, 853
BmiI GGNNCC 2 cut(s) 225, 254
BmrFI CCNGG 2 cut(s) 270, 675
BmrI ACTGGG 1 cut(s) 660
BmsI GCATC 2 cut(s) 294, 430
BmuI ACTGGG 1 cut(s) 660
BpiI GAAGAC 2 cut(s) 517, 593
BplI GAGNNNNNCTC 2 cut(s) 599, 631
BpuEI CTTGAG 1 cut(s) 983
BsaHI GRCGYC 2 cut(s) 224, 564
BsaJI CCNNGG 2 cut(s) 268, 269
BsaWI WCCGGW 2 cut(s) 215, 255
BsaXI ACNNNNNCTCC 3 cut(s) 287, 317, 986
Bsc4I CCNNNNNNNGG 1 cut(s) 418
Bse118I RCCGGY 2 cut(s) 215, 229
Bse1I ACTGG 3 cut(s) 595, 666, 911
Bse3DI GCAATG 2 cut(s) 655, 783
BseBI CCWGG 2 cut(s) 270, 675
BseDI CCNNGG 2 cut(s) 268, 269
BseGI GGATG 2 cut(s) 252, 445
BseLI CCNNNNNNNGG 1 cut(s) 418
BseMI GCAATG 2 cut(s) 655, 783
BseMII CTCAG 2 cut(s) 282, 792
BseNI ACTGG 3 cut(s) 595, 666, 911
BseRI GAGGAG 4 cut(s) 253, 256, 308, 728
BseX3I CGGCCG 1 cut(s) 476
BseXI GCAGC 2 cut(s) 137, 652
BsgI GTGCAG 1 cut(s) 875
Bsh1236I CGCG 1 cut(s) 913
Bsh1285I CGRYCG 1 cut(s) 479
BshFI GGCC 1 cut(s) 478
BshNI GGYRCC 2 cut(s) 223, 252
BshTI ACCGGT 1 cut(s) 215
BsiEI CGRYCG 1 cut(s) 479
BsiHKAI GWGCWC 2 cut(s) 906, 999
BsiHKCI CYCGRG 1 cut(s) 160
BsiSI CCGG 3 cut(s) 216, 230, 256
BslI CCNNNNNNNGG 1 cut(s) 418
BsmAI GTCTC 4 cut(s) 55, 186, 461, 617
BsmBI CGTCTC 2 cut(s) 55, 186
BsmI GAATGC 1 cut(s) 103
BsnI GGCC 1 cut(s) 478
BsoBI CYCGRG 1 cut(s) 160
Bsp1286I GDGCHC 3 cut(s) 139, 906, 999
Bsp143I GATC 3 cut(s) 602, 622, 984
BspACI CCGC 9 cut(s) 80, 140, 143, 148, 191, 194, 227, 322, 475
BspANI GGCC 1 cut(s) 478
BspCNI CTCAG 2 cut(s) 283, 793
BspFNI CGCG 1 cut(s) 913
BspLI GGNNCC 2 cut(s) 225, 254
BspMI ACCTGC 1 cut(s) 769
BspT107I GGYRCC 2 cut(s) 223, 252
BsrBI CCGCTC 1 cut(s) 145
BsrDI GCAATG 2 cut(s) 655, 783
BsrFI RCCGGY 2 cut(s) 215, 229
BsrI ACTGG 3 cut(s) 595, 666, 911
BssAI RCCGGY 2 cut(s) 215, 229
BssECI CCNNGG 2 cut(s) 268, 269
BssMI GATC 3 cut(s) 602, 622, 984
BssNI GRCGYC 2 cut(s) 224, 564
Bst2UI CCWGG 2 cut(s) 270, 675
Bst4CI ACNGT 2 cut(s) 356, 535
Bst6I CTCTTC 2 cut(s) 373, 840
BstACI GRCGYC 2 cut(s) 224, 564
BstAPI GCANNNNNTGC 1 cut(s) 10
BstC8I GCNNGC 2 cut(s) 518, 708
BstDEI CTNAG 3 cut(s) 291, 690, 801
BstF5I GGATG 2 cut(s) 252, 445
BstFNI CGCG 1 cut(s) 913
BstH2I RGCGCY 2 cut(s) 168, 227
BstHHI GCGC 5 cut(s) 20, 167, 226, 543, 839
BstKTI GATC 3 cut(s) 605, 625, 987
BstMAI GTCTC 4 cut(s) 55, 186, 461, 617
BstMBI GATC 3 cut(s) 602, 622, 984
BstMCI CGRYCG 1 cut(s) 479
BstMWI GCNNNNNNNGC 5 cut(s) 10, 836, 892, 901, 910
BstNI CCWGG 2 cut(s) 270, 675
BstSCI CCNGG 2 cut(s) 268, 673
BstUI CGCG 1 cut(s) 913
BstV1I GCAGC 2 cut(s) 137, 652
BstV2I GAAGAC 2 cut(s) 517, 593
BstX2I RGATCY 1 cut(s) 622
BstYI RGATCY 1 cut(s) 622
BstZI CGGCCG 1 cut(s) 476
BsuRI GGCC 1 cut(s) 478
BtgZI GCGATG 1 cut(s) 402
BtrI CACGTC 2 cut(s) 180, 853
BtsCI GGATG 2 cut(s) 252, 445
BtsI GCAGTG 1 cut(s) 20
BtsIMutI CAGTG 3 cut(s) 20, 288, 904
BveI ACCTGC 1 cut(s) 769
Cac8I GCNNGC 2 cut(s) 518, 708
CfoI GCGC 5 cut(s) 20, 167, 226, 543, 839
Cfr10I RCCGGY 2 cut(s) 215, 229
CseI GACGC 1 cut(s) 919
Csp6I GTAC 4 cut(s) 219, 253, 265, 502
CspAI ACCGGT 1 cut(s) 215
CviAII CATG 2 cut(s) 313, 840
CviQI GTAC 4 cut(s) 219, 253, 265, 502
DdeI CTNAG 3 cut(s) 291, 690, 801
DinI GGCGCC 1 cut(s) 225
DpnI GATC 3 cut(s) 604, 624, 986
DpnII GATC 3 cut(s) 602, 622, 984
EaeI YGGCCR 1 cut(s) 476
EagI CGGCCG 1 cut(s) 476
Eam1104I CTCTTC 2 cut(s) 373, 840
EarI CTCTTC 2 cut(s) 373, 840
EciI GGCGGA 1 cut(s) 180
Ecl136II GAGCTC 1 cut(s) 997
EclXI CGGCCG 1 cut(s) 476
Eco24I GRGCYC 2 cut(s) 139, 999
Eco52I CGGCCG 1 cut(s) 476
Eco53kI GAGCTC 1 cut(s) 997
Eco88I CYCGRG 1 cut(s) 160
EcoICRI GAGCTC 1 cut(s) 997
EcoRII CCWGG 2 cut(s) 268, 673
EcoT22I ATGCAT 1 cut(s) 577
EcoT38I GRGCYC 2 cut(s) 139, 999
EgeI GGCGCC 1 cut(s) 225
EheI GGCGCC 1 cut(s) 225
Esp3I CGTCTC 2 cut(s) 55, 186
FaeI CATG 2 cut(s) 316, 843
FalI AAGNNNNNCTT 2 cut(s) 509, 541
FatI CATG 2 cut(s) 312, 839
FauI CCCGC 1 cut(s) 147
FauNDI CATATG 1 cut(s) 685
FbaI TGATCA 1 cut(s) 984
Fnu4HI GCNGC 6 cut(s) 143, 151, 194, 227, 476, 641
FokI GGATG 2 cut(s) 259, 452
FriOI GRGCYC 2 cut(s) 139, 999
Fsp4HI GCNGC 6 cut(s) 143, 151, 194, 227, 476, 641
FspI TGCGCA 2 cut(s) 19, 838
GlaI GCGC 5 cut(s) 19, 166, 225, 542, 838
GluI GCNGC 6 cut(s) 143, 151, 194, 227, 476, 641
HaeII RGCGCY 2 cut(s) 168, 227
HaeIII GGCC 1 cut(s) 478
HapII CCGG 3 cut(s) 216, 230, 256
HgaI GACGC 1 cut(s) 919
HhaI GCGC 5 cut(s) 20, 167, 226, 543, 839
Hin1I GRCGYC 2 cut(s) 224, 564
Hin1II CATG 2 cut(s) 316, 843
Hin6I GCGC 5 cut(s) 18, 165, 224, 541, 837
HinP1I GCGC 5 cut(s) 18, 165, 224, 541, 837
HinfI GANTC 6 cut(s) 158, 434, 554, 610, 655, 716
HpaII CCGG 3 cut(s) 216, 230, 256
HphI GGTGA 4 cut(s) 45, 247, 404, 470
Hpy166II GTNNAC 1 cut(s) 511
Hpy188I TCNGA 8 cut(s) 157, 373, 433, 439, 607, 619, 802, 899
Hpy188III TCNNGA 3 cut(s) 626, 659, 878
Hpy8I GTNNAC 1 cut(s) 511
HpyAV CCTTC 3 cut(s) 482, 809, 813
HpyCH4III ACNGT 2 cut(s) 356, 535
HpyCH4IV ACGT 3 cut(s) 179, 564, 852
HpyCH4V TGCA 5 cut(s) 4, 13, 575, 788, 856
HpyF10VI GCNNNNNNNGC 5 cut(s) 10, 836, 892, 901, 910
HpyF3I CTNAG 3 cut(s) 291, 690, 801
HpySE526I ACGT 3 cut(s) 179, 564, 852
Hsp92I GRCGYC 2 cut(s) 224, 564
Hsp92II CATG 2 cut(s) 316, 843
HspAI GCGC 5 cut(s) 18, 165, 224, 541, 837
KasI GGCGCC 1 cut(s) 223
KpnI GGTACC 1 cut(s) 256
Ksp22I TGATCA 1 cut(s) 984
Kzo9I GATC 3 cut(s) 602, 622, 984
LmnI GCTCC 4 cut(s) 150, 158, 324, 994
Lsp1109I GCAGC 2 cut(s) 137, 652
LweI GCATC 2 cut(s) 294, 430
MaeII ACGT 3 cut(s) 179, 564, 852
MaeIII GTNAC 1 cut(s) 356
MalI GATC 3 cut(s) 604, 624, 986
MbiI CCGCTC 1 cut(s) 145
MboI GATC 3 cut(s) 602, 622, 984
MboII GAAGA 6 cut(s) 64, 360, 517, 598, 632, 857
MflI RGATCY 1 cut(s) 622
MhlI GDGCHC 3 cut(s) 139, 906, 999
MluCI AATT 3 cut(s) 6, 341, 361
Mly113I GGCGCC 1 cut(s) 224
MlyI GAGTC 3 cut(s) 152, 619, 725
MmeI TCCRAC 1 cut(s) 180
Mph1103I ATGCAT 1 cut(s) 577
MseI TTAA 3 cut(s) 35, 636, 935
MspA1I CMGCKG 1 cut(s) 150
MspI CCGG 3 cut(s) 216, 230, 256
MspR9I CCNGG 2 cut(s) 270, 675
Mva1269I GAATGC 1 cut(s) 103
MvaI CCWGG 2 cut(s) 270, 675
MvnI CGCG 1 cut(s) 913
MwoI GCNNNNNNNGC 5 cut(s) 10, 836, 892, 901, 910
NarI GGCGCC 1 cut(s) 224
NdeI CATATG 1 cut(s) 685
NdeII GATC 3 cut(s) 602, 622, 984
NlaIII CATG 2 cut(s) 316, 843
NlaIV GGNNCC 2 cut(s) 225, 254
NmeAIII GCCGAG 1 cut(s) 504
NsbI TGCGCA 2 cut(s) 19, 838
NsiI ATGCAT 1 cut(s) 577
PaeR7I CTCGAG 1 cut(s) 160
PasI CCCWGGG 1 cut(s) 269
PcsI WCGNNNNNNNCGW 3 cut(s) 29, 384, 534
PctI GAATGC 1 cut(s) 103
PfeI GAWTC 3 cut(s) 434, 554, 655
PflFI GACNNNGTC 1 cut(s) 533
PfoI TCCNGGA 1 cut(s) 673
PinAI ACCGGT 1 cut(s) 215
PkrI GCNGC 6 cut(s) 144, 152, 195, 228, 477, 642
PleI GAGTC 3 cut(s) 152, 618, 724
PluTI GGCGCC 1 cut(s) 227
PpsI GAGTC 3 cut(s) 152, 618, 724
Psp124BI GAGCTC 1 cut(s) 999
Psp6I CCWGG 2 cut(s) 268, 673
PspGI CCWGG 2 cut(s) 268, 673
PspN4I GGNNCC 2 cut(s) 225, 254
PspXI VCTCGAGB 1 cut(s) 160
PsuI RGATCY 1 cut(s) 622
PsyI GACNNNGTC 1 cut(s) 533
RsaI GTAC 4 cut(s) 220, 254, 266, 503
RsaNI GTAC 4 cut(s) 219, 253, 265, 502
SacI GAGCTC 1 cut(s) 999
SaqAI TTAA 3 cut(s) 35, 636, 935
SatI GCNGC 6 cut(s) 143, 151, 194, 227, 476, 641
Sau3AI GATC 3 cut(s) 602, 622, 984
ScaI AGTACT 1 cut(s) 503
SchI GAGTC 3 cut(s) 152, 619, 725
ScrFI CCNGG 2 cut(s) 270, 675
SduI GDGCHC 3 cut(s) 139, 906, 999
SfaNI GCATC 2 cut(s) 294, 430
SfoI GGCGCC 1 cut(s) 225
Sfr274I CTCGAG 1 cut(s) 160
SgrAI CRCCGGYG 1 cut(s) 229
SlaI CTCGAG 1 cut(s) 160
SmlI CTYRAG 2 cut(s) 160, 998
SmoI CTYRAG 2 cut(s) 160, 998
Sse9I AATT 3 cut(s) 6, 341, 361
SsiI CCGC 9 cut(s) 80, 140, 143, 148, 191, 194, 227, 322, 475
SspDI GGCGCC 1 cut(s) 223
SstI GAGCTC 1 cut(s) 999
StyD4I CCNGG 2 cut(s) 268, 673
TaaI ACNGT 2 cut(s) 356, 535
TaiI ACGT 3 cut(s) 182, 567, 855
TasI AATT 3 cut(s) 6, 341, 361
TatI WGTACW 1 cut(s) 501
TauI GCSGC 4 cut(s) 145, 196, 229, 478
TfiI GAWTC 3 cut(s) 434, 554, 655
Tru1I TTAA 3 cut(s) 35, 636, 935
Tru9I TTAA 3 cut(s) 35, 636, 935
TscAI CASTG 3 cut(s) 20, 295, 911
TseI GCWGC 2 cut(s) 150, 640
TspDTI ATGAA 3 cut(s) 329, 567, 672
TspGWI ACGGA 1 cut(s) 479
TspRI CASTG 3 cut(s) 20, 295, 911
Tth111I GACNNNGTC 1 cut(s) 533
XhoI CTCGAG 1 cut(s) 160
ZraI GACGTC 1 cut(s) 565
ZrmI AGTACT 1 cut(s) 503
Zsp2I ATGCAT 1 cut(s) 577
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.