AT2G26780

Proteasome-associated protein ECM29 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0006358
Physical Location & Seq
Forward (+)
11409828 .. 11423776
13949 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G26780.2

Sequence Viewer

Length: 5481 bp
ATGGAAGGTTCTTCATCTTCGTCTTCGTTAATTTCCAAATCGGACGCTGAGTTGGAGGAAATGCTCGATCGGATGCTGACGAGACTCGCTCTTTGCGACGACTCCAAGCTCGAATCCCTAGTCTCTAACCTCCTTCCTCTTACCATATCTTCTCTTTCTTCTCAATCTCCCGTTGTTCGCAACAAGGTTCTTGAGATATTGAGTCATGTTAACAAGAGAGTGAAGCATCAGCATGAAATTGGTTTGCCTTTATTGGCTTTATGGAAATTGTACACAGATCCTGCTGCTGCTCCTATGGTTAGGAACTTTGCTATTGTCTATGTTGAGATGGCTTTTGAACGAGCTCCTGCAAAGGAAAGGGAGGAAATTGCACCTAATACACTGGAGAATGTTTCAAAGCTTCCTAAGCAGCATCAAGAGATTATTTTGAGAATTGCTATTAAGGTCATTGGAGAATGTCATGCAAGCAAGATCAGTGATGATGTGTCTGCGAAGTATAGATCTTTGATTACTTCTCAGGATAAAGACTTGTTTCTGGATTTTTGCCTTCATATGCTTTTGTATCAACCATCTTCTCAAGGAGGTGGATCTTCTCCTGGGCTTTCAGTTTTTCAAGTTAATCGTATAATCGGAAAGCAAGCATTAAAAGGGGACACGCTTACAAGACGAAAGTTGGGGATCTTGAATGTCATTGGAAACATGGACCTACCTGGTGAATCTGTATATCCATTGTACATTGCTGCATCAGTGGATAGTCAAGAACCTGTAGCTAAGAGAGGGGAAGAGCTTCTAAAAAAGATAGCTTCTGGAACAAATTTGGATGATCCCAAGTTGATAAACAGACTGTTCTTACTATTCAATGGCACTACAGGCACTGAAAATGTTGCTCCGGAACATAATGTAGCTCCAGGAAATATATCCTTGAAAATGAAGCTCATGTCTGGTTTCTGTCGTTCTATCGCAGCTGCAAATAGTTTTCCTGCAACATTGCAGTGCATATTTGGCTGCATGTATGGAAGTGGAACAACCTTAAGGCTAAAGCAAATGGGAATGGAGTTCACCGTGTGGGTTTTTAAGCATGGGAAGATAGATCAGTTGAAACTTATGGGACCTGTTATACTGAATGCTATTCTAAAAATGCTTGATGGTTTCACAGGCTCAGAAACAGATGCTCTATCGAGGGAGACCAAAACATTTTCTTTTCAAGCTATTGGTTTACTTGCACAACGTTTGCCTCAGCTTTTTAGAGAAAAGACTGAAATGGCTGTTCGTCTTTTTGATGCGCTGAAATTAGAAACCCAATCTCTTCGTTCAACCATCCAGGAGGCAATAGTTTCTCTTGCTGCTGCATACAAGGACTCCCCAGAGAATATTCTCAGAGACTTGGAGGTGCTTCTGCTAGCAAATTCTCTGGCGGGGTTTATAAAGTCTAGTATCTTTATTGCTTCTATTGACCAGGAACAAAATGAAGCTCGCTTTTGTGCTTTACGATGGGCAACTTCTTTGTATAATTCACACCATTGTCCAAGTCTCTATATTTGCATGCTGAGTGCAGCAGATCCGAAGCTAGATATAAGGGAAATAGCACTCGAAGGACTCTTTCTGAAAGAAGAAGGTCGCAGTATAGTCTCTAATCATGACCATAAGTACCCAAAATTTATTGAGATGCTGGAGTACATTCTCAAGCAACAGCCAAAACTGTTAGATTCTTCAGAAATGAGAAGCCAGAAGCTTCTCTTTCCCTCGCAAGTCTATCTGGTCATGATAAAGTTTTTAGTGAAGTGTTTTGAGTTAGAGATGGAGGAGAGCAATACCCAGGCTGTAGGGACTGAATTTTTGGATTCGGCACAAAAAATGTGTTCGTTGTTGGAACATTCCTTGGCATTCGAAGGCTCGGCTGAACTACATGCTTGTGCTTCTAAAGCATTGGTTTCAGTTGGCTCTTACCTTCCGGAGATGGTTGAACTTTACTTCTCCCGAAAAATTGTGTGGCTAAGAAGTCTGCTTAGTCATACAGACTTGAGTACTCGTGAATCTGTATCACGATTACTCGGAATGGCATCCTGTGCTCTGTCTGATGCTGAATCATGTTCCTTGCTCTCTGAATTGATATCTTCAATTTCCCAACCGCAGAAGTTAAGGTTTGAGGCACAGCATGGGGGATTATGCGCTGTAGGATTTGTATCAGCACACTGTTTACATAGGATCCCCACTGTTTCTAAAGCAGTTACTCAAAATGCGGTAAAGTATTTGGTGGAAGTTGTTAATTTAGAGACTGCACCACTGGCTTCTGTTGCTATGGAAGCTCTGGGTCATATTGGGATTTGTGGCGCATTACCCTTTCTTGTTAATGATTCTAGTCCAGGGACTCAAGTGCTGGAAATTCTTCAAGAAAGATTGAGCAAGCTACTCTCTGGTGATGATATAAAATCAGTTCAGAAAATTGCTCTTTCTCTTGGACATATCTGTTCAAATGAAACGTCATCTTCGCACTTGAAAATAGCGCTTGATCTTTTATTTAGCCTTTCACGGTCAAAGGCTGAAGAAATTTTGTTTGCTGCTGGTGAGGCGCTATCTTTCCTCTGGGGTGGTGTACCAGTTACTGCTGATATGATTCTGAAAACTAATTATACTTCTCTTTCGACGGACTCAAATTTTCTGATGAAAGAAGTTAAATCTTTGTCTGATGTCAAAACTGATACTGAGGAAGATAGCCGTACCACAACCAGAGAAACAATTACTGGAAAACTCTTTGACACTCTTCTGTATAGTAGCAGGAAGGAGGAACGATGTGCTGGAACTGTGTGGATGCTGTCTTTGACCATGTACTGTGGCCAGCAGCCATCAATCCAACTAATGCTTCCAAAAATCCAGGAGGCTTTCTCACATTTGTTAGGTGACCAGAATGAACTTACACAGGAGCTGGCATCCCAGGGCATGAGCATCATCTATGAACTTGGTGATGCATCAATGAAGAAAAGCCTGGTAGATGCTCTGGTAAATACTCTAACAGGCACAAGCAAAAGAAAACGAGCTATTAAGCTTGTTGAGGAGTCTGAAGTGTTTCAAGAGGGAACTATCGGTGAGAGTCCTAGTGGAGGGAAGATTAGCACTTACAAGGAGCTTTGTAATCTTGCAAATGAAATGGGGCAACCTGATTTAATTTACAAATTTATGGACTTAGCCAATCACCAAGCTTCTCTTAACTCAAAGAGAGGAGCTGCTTTTGGGTTCTCCAAGATAGCCAAGCAAGCTGGAGATGCTCTTCGACCACATTTGCGACTGTTGATTCCGAGGTTGATTCGTTACCAATATGATCCTGACAAAAATGTCCAGGATGCGATGGCACACATTTGGAAAGCACTGATACAAGACCCTAAGAAAGCTGTTGATGAACATTTGAATCACATCTTCGATGATCTGCTAGTACAATGTGGTTCACGGCTTTGGCGCTCCCGTGAGGCATCCTGTTTGGCTCTTGCTGATATTATTCAAGGTCGGAAATTTGACCAGGTCAAGGAGCATTTGAAAAAACTATGGATAGCTGCCTTCCGTGCAATGGATGACATTAAAGAAACTGTGAGAAATGCTGGTGATAAGTTATGTCGTGCCGTGACATCCTTAACAATAAGGATCTGTGATGTCACGCTTACCGAACTAGCAGATGCAAAACAAGCGATGGATATTGTTCTTCCTTTTTTGCTTTCAGAAGGAATAATGAGTAAAGTCAACAGTGTACGTAAGGCTTCAATTGGAGTTGTTATGAAGCTTGCAAAGGGTGCAGGAGTTGCCCTCCGTCCACATTTGTCCGACTTAGTTTGTTGTATGTTGGAAAGTTTGTCTAGTCTTGAAGACCAAGGACTTAACTATGTTGAGTTGCATGCTGCCAATATTGGCATAGAAACCGAGAAACTTGAAAATTTACGAATTTCAATCTCGAAAGGCTCTCCAATGTGGGAAACACTTGATCTGTGTATTAATATAGTGGATATTGAATCACTTGAACAATTGATCCCTCGTCTCACTCAACTTGTTCGGGGTGGTGTTGGCCTCAATACGAGAGTTGGTGTTGCCAGCTTTATCTCATTGCTAGTTCAAAAAGTTGGTTCCGAGATAAAGCCGTTCACTGGAATGCTGCTGAGACTTTTGTTTCCTGTTGCCAAAGAGGAGAAAAGTTCTGCTGCAAAACGTGCCTTTTCGAGTGCTTGCGGCATTGTATTGAAGTATTCTAGCCCCTCTCAAGCTCAAAGCTTAATCGAAGAAACTGCAGCTCTGCACTCTGGTGATAGAAGCTCCCAGATCGCATGTGCGAGTCTGTTCAAAAGCTTCTCATCTACAGCTGCTGATATTATGAGCAGTCATCAGTCGGCTATTGTTCCAGCTATATTTATTTCCAGATTTGAGGATGAAAAACAGATTTCGAGTCTCTTTGAGGAGGTGTGGGAAGACATCACAAGTGGTGAAAGGGTCACACTACAGTTGTTTCTGCAAGAAATTGTGAATCATATCTGCGAGAGCATCACATCATCCTCGTGGGCAAGCAAGAAGAAGTCTGGTAAGGCAATTTGCAAACTAACTGAAGTCTTGGGTGAATCATTATCGCCACACCACAAGAGATTGCTACAATGTCTTGTCAATGAAATTCCTGGACGTTTATGGGAGGGAAAGGATGCTCTTTTGGATGCCCTAGGTGCTCTTTCAGTCGCTTGCCACGAGGCAATAACTAAGGAGGACCCAACAACTCCGACTACCATCTTGAGTCTTATCTGTTCTGCATGCAAAAAGAAACTCAAGAAATATCGCGAGTCAGCCTTTTCTTGTCTGGAGAAGGTCATAATAGCTTTTGGCGATCCAAAGTTTTTCCATGCCGTTTTCCCGATGTTGTATGAGATGTGTAATACTGCCTCCATCAAAACGAACACTCAAGTTCAGGCAGCAAGTGATGCTGTCAAAACAGAATCAGAAAATGGAGAAGATGGACATGTCCCTCTTGAAAAAATTATGGAATGCGTCAAGTCTTGCATCCAAGTGGCAACTATAGATGACATTCTTAGCGCAAAAGCAGATTTGATTCATGTTCTTATAATTTCCTTATCACCTGGTTTTCTGTGGACTGTAAAAATGTCTGGAATTTCATGTGTGGGAAAGCTTTGTTCAAGGTTTCCGAGTCTATGGACTGACTCCATGGATGACCTTTCACCTAGTGATGCGACAAAATTCGTTCATGAGTTATTTCACTCACTAGTTCCTAAACTCCTGGAGTGCATACACACTGTGAAGATAGCACAGTTTCATGTGGCTGCTTCCCAATGCCTGCTTGAGCTCATCGAACTGTATAGCACAATCTCGTCTTTGCATCCCGTGGAAGTAGATTTTAAGGCTGAGGTTGTTTCTTTACTTGAACTCGAAAAGAGTGAAGAAGCCAAGTCGTTGTTGAGAAAATCCAGGGATGCTCTTGCAAATCTCCCTTCGTTAAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ecm29

Protein Analysis

1826

Amino Acids

201.21

Weight (kDa)

6.21

Isoelectric Point (pI)

45.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ECM29_N PF13001 22 - 502 7.3e-135 Proteasome component ECM29, N-terminal
ARM_ECM29 PF23702 628 - 721 2.8e-07 ECM29, ARM-like repeats
HEAT_GCN1 PF23271 1065 - 1193 3.4e-06 Stalled ribosome sensor GCN1-like, HEAT repeats
HEAT_ECM29 PF24492 1251 - 1410 3.5e-46 Proteasome adapter and scaffold protein ECM29, HEAT-repeat domain
ARM_ECM29_C PF23731 1579 - 1800 5e-06 ECM29, C-terminal ARM-like repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1424, 5084
AasI GACNNNNNNGTC 1 cut(s) 3329
AccII CGCG 1 cut(s) 4803
AccIII TCCGGA 2 cut(s) 889, 1951
AciI CCGC 4 cut(s) 1415, 2129, 2240, 4209
AclI AACGTT 1 cut(s) 1228
AcoI YGGCCR 1 cut(s) 2833
AcuI CTGAAG 4 cut(s) 1695, 2562, 3078, 4599
AdeI CACNNNGTG 3 cut(s) 1065, 5204, 5275
AfeI AGCGCT 1 cut(s) 2505
AfiI CCNNNNNNNGG 4 cut(s) 3098, 3517, 3559, 4127
AflII CTTAAG 1 cut(s) 1030
AflIII ACRYGT 1 cut(s) 4981
AhlI ACTAGT 1 cut(s) 5242
AjuI GAANNNNNNNTTGG 2 cut(s) 2844, 2876
AleI CACNNNNGTG 1 cut(s) 4281
AloI GAACNNNNNNTCC 2 cut(s) 3996, 4028
Alw21I GWGCWC 4 cut(s) 346, 2071, 4696, 5325
AlwNI CAGNNNCTG 5 cut(s) 281, 875, 2603, 2923, 4343
Aor13HI TCCGGA 2 cut(s) 889, 1951
Aor51HI AGCGCT 1 cut(s) 2505
AoxI GGCC 2 cut(s) 2833, 4048
ArsI GACNNNNNNTTYG 8 cut(s) 75, 105, 107, 137, 1819, 1851, 2465, 2497
AseI ATTAAT 1 cut(s) 3978
Asp700I GAANNNNTTC 3 cut(s) 786, 2385, 3063
AspA2I CCTAGG 1 cut(s) 4687
AspLEI GCGC 7 cut(s) 1285, 2171, 2333, 2506, 2572, 3453, 5057
AspS9I GGNCC 3 cut(s) 703, 1109, 4732
AsuII TTCGAA 1 cut(s) 1887
AsuNHI GCTAGC 1 cut(s) 1399
AvaII GGWCC 3 cut(s) 703, 1109, 4732
AvrII CCTAGG 1 cut(s) 4687
BalI TGGCCA 1 cut(s) 2835
BamHI GGATCC 1 cut(s) 2205
BanII GRGCYC 2 cut(s) 346, 5325
BauI CACGAG 3 cut(s) 2028, 4531, 4712
BbsI GAAGAC 3 cut(s) 15, 3858, 4452
Bbv12I GWGCWC 4 cut(s) 346, 2071, 4696, 5325
BbvCI CCTCAGC 2 cut(s) 1236, 5382
BceAI ACGGC 5 cut(s) 2700, 3458, 3596, 4105, 4853
BcgI CGANNNNNNTGC 2 cut(s) 4247, 4281
BcuI ACTAGT 1 cut(s) 5242
BfmI CTRYAG 8 cut(s) 765, 867, 1821, 2172, 4266, 4335, 4475, 5037
BfoI RGCGCY 3 cut(s) 2507, 2573, 3454
BfrI CTTAAG 1 cut(s) 1030
BglII AGATCT 1 cut(s) 500
BlnI CCTAGG 1 cut(s) 4687
BmcAI AGTACT 1 cut(s) 2026
Bme18I GGWCC 3 cut(s) 703, 1109, 4732
BmgT120I GGNCC 3 cut(s) 703, 1109, 4732
BmiI GGNNCC 4 cut(s) 1110, 2207, 4108, 4734
BmtI GCTAGC 1 cut(s) 1403
BpiI GAAGAC 3 cut(s) 15, 3858, 4452
BplI GAGNNNNNCTC 6 cut(s) 73, 105, 2867, 2899, 3777, 3809
BpmI CTGGAG 6 cut(s) 404, 891, 1691, 3276, 4844, 5279
Bpu10I CCTNAGC 3 cut(s) 405, 1236, 5382
Bpu14I TTCGAA 1 cut(s) 1887
BsaAI YACGTR 1 cut(s) 3740
BsaBI GATNNNNATC 1 cut(s) 2182
BsaI GGTCTC 1 cut(s) 1178
BsaWI WCCGGW 2 cut(s) 889, 1951
BsaXI ACNNNNNCTCC 2 cut(s) 1343, 1373
Bsc4I CCNNNNNNNGG 4 cut(s) 3098, 3517, 3559, 4127
Bse1I ACTGG 5 cut(s) 387, 2289, 2597, 2746, 4132
Bse3DI GCAATG 4 cut(s) 735, 986, 3564, 4085
Bse8I GATNNNNATC 1 cut(s) 2182
BseAI TCCGGA 2 cut(s) 889, 1951
BseJI GATNNNNATC 1 cut(s) 2182
BseLI CCNNNNNNNGG 4 cut(s) 3098, 3517, 3559, 4127
BseMI GCAATG 4 cut(s) 735, 986, 3564, 4085
BseMII CTCAG 9 cut(s) 39, 530, 1173, 1250, 1390, 1538, 2694, 4130, 5373
BseNI ACTGG 5 cut(s) 387, 2289, 2597, 2746, 4132
BseRI GAGGAG 5 cut(s) 1817, 3065, 3231, 4181, 4448
BsgI GTGCAG 4 cut(s) 1572, 2262, 3801, 4259
Bsh1236I CGCG 1 cut(s) 4803
Bsh1285I CGRYCG 1 cut(s) 70
BshFI GGCC 2 cut(s) 2835, 4050
BsiEI CGRYCG 1 cut(s) 70
BsiHKAI GWGCWC 4 cut(s) 346, 2071, 4696, 5325
BsiSI CCGG 2 cut(s) 890, 1952
BslFI GGGAC 5 cut(s) 665, 1122, 1840, 2380, 4970
BslI CCNNNNNNNGG 4 cut(s) 3098, 3517, 3559, 4127
BsmBI CGTCTC 1 cut(s) 4025
BsmFI GGGAC 5 cut(s) 665, 1122, 1840, 2380, 4970
BsmI GAATGC 4 cut(s) 1129, 1883, 4137, 5012
BsnI GGCC 2 cut(s) 2835, 4050
Bso31I GGTCTC 1 cut(s) 1178
Bsp119I TTCGAA 1 cut(s) 1887
Bsp1286I GDGCHC 4 cut(s) 346, 2071, 4696, 5325
Bsp13I TCCGGA 2 cut(s) 889, 1951
Bsp1407I TGTACA 2 cut(s) 270, 732
Bsp19I CCATGG 1 cut(s) 5184
Bsp68I TCGCGA 1 cut(s) 4803
BspACI CCGC 4 cut(s) 1415, 2129, 2240, 4209
BspANI GGCC 2 cut(s) 2835, 4050
BspCNI CTCAG 9 cut(s) 40, 529, 1172, 1249, 1389, 1539, 2695, 4131, 5374
BspEI TCCGGA 2 cut(s) 889, 1951
BspFNI CGCG 1 cut(s) 4803
BspHI TCATGA 3 cut(s) 1636, 1761, 5224
BspLI GGNNCC 4 cut(s) 1110, 2207, 4108, 4734
BspMAI CTGCAG 1 cut(s) 4270
BspOI GCTAGC 1 cut(s) 1403
BspQI GCTCTTC 2 cut(s) 777, 3270
BspT104I TTCGAA 1 cut(s) 1887
BspTI CTTAAG 1 cut(s) 1030
BspTNI GGTCTC 1 cut(s) 1178
BsrDI GCAATG 4 cut(s) 735, 986, 3564, 4085
BsrGI TGTACA 2 cut(s) 270, 732
BsrI ACTGG 5 cut(s) 387, 2289, 2597, 2746, 4132
BssSI CACGAG 3 cut(s) 2028, 4531, 4712
BssT1I CCWWGG 4 cut(s) 1878, 3856, 4687, 5184
Bst2BI CACGAG 3 cut(s) 2028, 4531, 4712
Bst6I CTCTTC 4 cut(s) 777, 1311, 2766, 3270
BstAFI CTTAAG 1 cut(s) 1030
BstAPI GCANNNNNTGC 5 cut(s) 2066, 3779, 3788, 4190, 4943
BstAUI TGTACA 2 cut(s) 270, 732
BstBAI YACGTR 1 cut(s) 3740
BstBI TTCGAA 1 cut(s) 1887
BstDSI CCRYGG 2 cut(s) 5184, 5361
BstEII GGTNACC 1 cut(s) 2897
BstENI CCTNNNNNAGG 1 cut(s) 3096
BstFNI CGCG 1 cut(s) 4803
BstH2I RGCGCY 3 cut(s) 2507, 2573, 3454
BstHHI GCGC 7 cut(s) 1285, 2171, 2333, 2506, 2572, 3453, 5057
BstMCI CGRYCG 1 cut(s) 70
BstNSI RCATGY 7 cut(s) 1012, 1546, 1910, 3884, 4308, 4779, 4985
BstPI GGTNACC 1 cut(s) 2897
BstSFI CTRYAG 8 cut(s) 765, 867, 1821, 2172, 4266, 4335, 4475, 5037
BstSNI TACGTA 1 cut(s) 3740
BstUI CGCG 1 cut(s) 4803
BstV2I GAAGAC 3 cut(s) 15, 3858, 4452
BstX2I RGATCY 7 cut(s) 277, 500, 587, 678, 1558, 2205, 3633
BstYI RGATCY 7 cut(s) 277, 500, 587, 678, 1558, 2205, 3633
BsuRI GGCC 2 cut(s) 2835, 4050
BtgI CCRYGG 2 cut(s) 5184, 5361
BtgZI GCGATG 2 cut(s) 3356, 3692
BtsI GCAGTG 1 cut(s) 998
BtuMI TCGCGA 1 cut(s) 4803
CaiI CAGNNNCTG 5 cut(s) 281, 875, 2603, 2923, 4343
CciI TCATGA 3 cut(s) 1636, 1761, 5224
CfoI GCGC 7 cut(s) 1285, 2171, 2333, 2506, 2572, 3453, 5057
Cfr13I GGNCC 3 cut(s) 703, 1109, 4732
CseI GACGC 2 cut(s) 53, 4999
CsiI ACCWGGT 3 cut(s) 709, 3510, 5098
DraIII CACNNNGTG 3 cut(s) 1065, 5204, 5275
DrdI GACNNNNNNGTC 1 cut(s) 3329
DseDI GACNNNNNNGTC 1 cut(s) 3329
EaeI YGGCCR 1 cut(s) 2833
Eam1104I CTCTTC 4 cut(s) 777, 1311, 2766, 3270
EarI CTCTTC 4 cut(s) 777, 1311, 2766, 3270
Ecl136II GAGCTC 2 cut(s) 344, 5323
Eco105I TACGTA 1 cut(s) 3740
Eco130I CCWWGG 4 cut(s) 1878, 3856, 4687, 5184
Eco24I GRGCYC 2 cut(s) 346, 5325
Eco31I GGTCTC 1 cut(s) 1178
Eco32I GATATC 1 cut(s) 2112
Eco47I GGWCC 3 cut(s) 703, 1109, 4732
Eco47III AGCGCT 1 cut(s) 2505
Eco53kI GAGCTC 2 cut(s) 344, 5323
Eco57I CTGAAG 4 cut(s) 1695, 2562, 3078, 4599
Eco91I GGTNACC 1 cut(s) 2897
EcoICRI GAGCTC 2 cut(s) 344, 5323
EcoNI CCTNNNNNAGG 1 cut(s) 3096
EcoO109I RGGNCCY 2 cut(s) 1109, 4732
EcoO65I GGTNACC 1 cut(s) 2897
EcoRV GATATC 1 cut(s) 2112
EcoT14I CCWWGG 4 cut(s) 1878, 3856, 4687, 5184
EcoT22I ATGCAT 1 cut(s) 2968
EcoT38I GRGCYC 2 cut(s) 346, 5325
ErhI CCWWGG 4 cut(s) 1878, 3856, 4687, 5184
Esp3I CGTCTC 1 cut(s) 4025
FalI AAGNNNNNCTT 4 cut(s) 1721, 1753, 3186, 3218
FaqI GGGAC 5 cut(s) 665, 1122, 1840, 2380, 4970
FauI CCCGC 1 cut(s) 1408
FauNDI CATATG 1 cut(s) 552
FriOI GRGCYC 2 cut(s) 346, 5325
GlaI GCGC 7 cut(s) 1284, 2170, 2332, 2505, 2571, 3452, 5056
GsuI CTGGAG 6 cut(s) 404, 891, 1691, 3276, 4844, 5279
HaeII RGCGCY 3 cut(s) 2507, 2573, 3454
HaeIII GGCC 2 cut(s) 2835, 4050
HapII CCGG 2 cut(s) 890, 1952
HgaI GACGC 2 cut(s) 53, 4999
HhaI GCGC 7 cut(s) 1285, 2171, 2333, 2506, 2572, 3453, 5057
Hin6I GCGC 7 cut(s) 1283, 2169, 2331, 2504, 2570, 3451, 5055
HinP1I GCGC 7 cut(s) 1283, 2169, 2331, 2504, 2570, 3451, 5055
HincII GTYRAC 2 cut(s) 211, 3730
HindII GTYRAC 2 cut(s) 211, 3730
HindIII AAGCTT 8 cut(s) 398, 1730, 3041, 3195, 3767, 4249, 4324, 5147
HpaI GTTAAC 1 cut(s) 211
HpaII CCGG 2 cut(s) 890, 1952
Hpy99I CGWCG 2 cut(s) 101, 2647
HpyCH4IV ACGT 5 cut(s) 1228, 2480, 3739, 4189, 4651
HpySE526I ACGT 5 cut(s) 1228, 2480, 3739, 4189, 4651
HspAI GCGC 7 cut(s) 1283, 2169, 2331, 2504, 2570, 3451, 5055
Kpn2I TCCGGA 2 cut(s) 889, 1951
KspAI GTTAAC 1 cut(s) 211
LguI GCTCTTC 2 cut(s) 777, 3270
MabI ACCWGGT 3 cut(s) 709, 3510, 5098
MaeII ACGT 5 cut(s) 1228, 2480, 3739, 4189, 4651
MaeIII GTNAC 7 cut(s) 2227, 2599, 2897, 3305, 3613, 3643, 4468
MfeI CAATTG 2 cut(s) 3750, 4007
MflI RGATCY 7 cut(s) 277, 500, 587, 678, 1558, 2205, 3633
MhlI GDGCHC 4 cut(s) 346, 2071, 4696, 5325
MlsI TGGCCA 1 cut(s) 2835
MluNI TGGCCA 1 cut(s) 2835
MmeI TCCRAC 7 cut(s) 33, 1848, 2875, 3479, 3810, 3834, 4769
Mox20I TGGCCA 1 cut(s) 2835
Mph1103I ATGCAT 1 cut(s) 2968
MroI TCCGGA 2 cut(s) 889, 1951
MroXI GAANNNNTTC 3 cut(s) 786, 2385, 3063
MscI TGGCCA 1 cut(s) 2835
MslI CAYNNNNRTG 7 cut(s) 231, 991, 1911, 4130, 4281, 4531, 5027
Msp20I TGGCCA 1 cut(s) 2835
MspA1I CMGCKG 2 cut(s) 965, 4340
MspCI CTTAAG 1 cut(s) 1030
MspI CCGG 2 cut(s) 890, 1952
MunI CAATTG 2 cut(s) 3750, 4007
Mva1269I GAATGC 4 cut(s) 1129, 1883, 4137, 5012
MvnI CGCG 1 cut(s) 4803
NcoI CCATGG 1 cut(s) 5184
NdeI CATATG 1 cut(s) 552
NheI GCTAGC 1 cut(s) 1399
NlaIV GGNNCC 4 cut(s) 1110, 2207, 4108, 4734
NmeAIII GCCGAG 1 cut(s) 1874
NmuCI GTSAC 4 cut(s) 2897, 3613, 3643, 4468
NruI TCGCGA 1 cut(s) 4803
NsiI ATGCAT 1 cut(s) 2968
NspI RCATGY 7 cut(s) 1012, 1546, 1910, 3884, 4308, 4779, 4985
NspV TTCGAA 1 cut(s) 1887
OliI CACNNNNGTG 1 cut(s) 4281
PaeI GCATGC 3 cut(s) 1546, 3884, 4779
PagI TCATGA 3 cut(s) 1636, 1761, 5224
PasI CCCWGGG 1 cut(s) 2932
PciI ACATGT 1 cut(s) 4981
PciSI GCTCTTC 2 cut(s) 777, 3270
PcsI WCGNNNNNNNCGW 2 cut(s) 93, 4710
PctI GAATGC 4 cut(s) 1129, 1883, 4137, 5012
PdmI GAANNNNTTC 3 cut(s) 786, 2385, 3063
PflFI GACNNNGTC 1 cut(s) 3512
PfoI TCCNGGA 6 cut(s) 907, 1320, 2871, 3333, 4645, 5256
Ple19I CGATCG 1 cut(s) 70
Ppu21I YACGTR 1 cut(s) 3740
PpuMI RGGWCCY 2 cut(s) 1109, 4732
PscI ACATGT 1 cut(s) 4981
PshBI ATTAAT 1 cut(s) 3978
PsiI TTATAA 2 cut(s) 1424, 5084
Psp124BI GAGCTC 2 cut(s) 346, 5325
Psp1406I AACGTT 1 cut(s) 1228
Psp5II RGGWCCY 2 cut(s) 1109, 4732
PspEI GGTNACC 1 cut(s) 2897
PspN4I GGNNCC 4 cut(s) 1110, 2207, 4108, 4734
PspPI GGNCC 3 cut(s) 703, 1109, 4732
PspPPI RGGWCCY 2 cut(s) 1109, 4732
PstI CTGCAG 1 cut(s) 4270
PstNI CAGNNNCTG 5 cut(s) 281, 875, 2603, 2923, 4343
PsuI RGATCY 7 cut(s) 277, 500, 587, 678, 1558, 2205, 3633
PsyI GACNNNGTC 1 cut(s) 3512
PvuI CGATCG 1 cut(s) 70
PvuII CAGCTG 2 cut(s) 965, 4340
RruI TCGCGA 1 cut(s) 4803
RseI CAYNNNNRTG 7 cut(s) 231, 991, 1911, 4130, 4281, 4531, 5027
SacI GAGCTC 2 cut(s) 346, 5325
SapI GCTCTTC 2 cut(s) 777, 3270
Sau96I GGNCC 3 cut(s) 703, 1109, 4732
ScaI AGTACT 1 cut(s) 2026
SduI GDGCHC 4 cut(s) 346, 2071, 4696, 5325
SexAI ACCWGGT 3 cut(s) 709, 3510, 5098
SfcI CTRYAG 8 cut(s) 765, 867, 1821, 2172, 4266, 4335, 4475, 5037
SfuI TTCGAA 1 cut(s) 1887
SinI GGWCC 3 cut(s) 703, 1109, 4732
SmiMI CAYNNNNRTG 7 cut(s) 231, 991, 1911, 4130, 4281, 4531, 5027
SnaBI TACGTA 1 cut(s) 3740
SpeI ACTAGT 1 cut(s) 5242
SphI GCATGC 3 cut(s) 1546, 3884, 4779
SsiI CCGC 4 cut(s) 1415, 2129, 2240, 4209
SspI AATATT 2 cut(s) 1372, 3892
SstI GAGCTC 2 cut(s) 346, 5325
StyI CCWWGG 4 cut(s) 1878, 3856, 4687, 5184
TaiI ACGT 5 cut(s) 1231, 2483, 3742, 4192, 4654
TatI WGTACW 6 cut(s) 270, 732, 1674, 2024, 2826, 3427
TauI GCSGC 1 cut(s) 4212
TseFI GTSAC 4 cut(s) 2897, 3613, 3643, 4468
Tsp45I GTSAC 4 cut(s) 2897, 3613, 3643, 4468
TspGWI ACGGA 3 cut(s) 2660, 3542, 3785
Tth111I GACNNNGTC 1 cut(s) 3512
Vha464I CTTAAG 1 cut(s) 1030
VpaK11BI GGWCC 3 cut(s) 703, 1109, 4732
VspI ATTAAT 1 cut(s) 3978
XagI CCTNNNNNAGG 1 cut(s) 3096
XceI RCATGY 7 cut(s) 1012, 1546, 1910, 3884, 4308, 4779, 4985
XmaJI CCTAGG 1 cut(s) 4687
XmnI GAANNNNTTC 3 cut(s) 786, 2385, 3063
ZrmI AGTACT 1 cut(s) 2026
Zsp2I ATGCAT 1 cut(s) 2968
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.