Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009110

Physical Location & Seq

Genomic Coordinates Reverse (-)

12398745 .. 12403621

Gene Structure 4877 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G28880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2760 bp

ATGAACATGAATTTTTCGTTTTGTTCAACATCTTCTGAGTTATCATATCCAAGTGAGAATGTTCTGAGATTTTCTGTTGCAAGTCGGCTGTTTTCTCCTAAATGGAAGAAAAGTTTCATTAGTTTACCTTGTCGTAGTAAAACTACGAGGAAGGTTTTGGCGTCAAGCCGTTATGTGCCAGGGAAATTGGAAGATTTGTCGGTTGTTAAGAAGAGTTTACCGAGAAGAGAACCTGTGGAGAAGCTTGGTTTTGTGAGGACTTTGTTGATTGATAATTATGATAGTTATACATTCAATATATATCAGGCTCTGAGTACTATTAATGGAGTGCCTCCTGTCGTTATTCGGAATGATGAGTGGACGTGGGAAGAAGCTTACCATTACTTATATGAAGATGTTGCTTTTGATAATATTGTTATATCGCCTGGACCTGGTTCGCCTATGTGTCCAGCTGATATAGGAATATGTCTTCGTCTTTTGCTTGAATGCCGTGATATCCCAATTCTAGGCGTCTGCCTTGGCCACCAGGCACTAGGTTATGTCCATGGAGCTCATGTGGTGCATGCCCCGGAACCAGTCCATGGACGGTTGAGTGGGATTGAACATGATGGGAACATATTGTTTTCTGATATTCCATCCGGGAGAAACTCTGATTTTAAGGTTGTTAGATACCATTCACTGATCATAGATAAGGAATCACTACCAAAGGAACTTGTACCAATAGCGTGGACGATTTATGATGACACTGGCTCTTTCTCTGAGAAGAATTCCTGTGTTCCTGTGAATAACACTGGGAGCCCACTTGGGAACGGATCTGTCATTCCTGTTTCAGAAAAGTTAGAAAATCGAAGTCATTGGCCTTCGTCCCATGTTAATGGGAAACAAGATAGACACATTCTCATGGGCATCATGCATTCTTCTTTTCCCCATTATGGTTTACAGTTTCATCCAGAAAGTATTGCTACTACCTATGGTAGTCAGTTATTTAAAAATTTCAAGGACATAACTGTGAATTATTGGAGTCGGTGCAAATCTACATCCCTGCGTCGAAGAAACATAAATGACACTGCAAACATGCAGGTGCCTGATGCTACTCAATTGCTGAAAGAACTTTCTAGAACTAGATGTACAGGAAATGGTTCTAGCTATTTTGGGAACCCTAAGTCTCTGTTTTCTGCCAAGACAAATGGTGTAGACGTCTTTGATATGGTGGATTCATCATATCCAAAACCACATACAAAATTGCTGAGGTTGAAATGGAAGAAGCATGAACGTCTTGCGCATAAAGTTGGTGGAGTAAGAAATATATTTATGGAACTCTTTGGCAAGAATAGAGGAAATGATACTTTTTGGCTGGATACTTCTTCTAGTGACAAGGCTAGAGGACGATTTTCTTTCATGGGCGGTAAAGGTGGATCTCTCTGGAAGCAATTGACATTTAGTTTATCTGATCAAAGTGAGGTTACATCAAAACATGCGGGACATCTTCTGATTGAAGATTCTCAGAGTTCTACTGAGAAACAATTCTTGGAAGAAGGCTTTCTTGATTTTCTCCGTAAGGAGCTTTCATCTATCTCTTATGATGAGAAGGACTTCGAAGAGTTGCCTTTTGATTTTTGCGGTGGATACGTAGGTTGTATTGGGTATGATATTAAAGTGGAATGTGGAATGCCAATTAATCGTCACAAATCCAACGCTCCAGATGCATGTTTCTTCTTTGCGGATAATGTTGTCGCCATTGATCATCAACTCGATGACGTTTATATATTATCGCTTTACGAAGAGGGAACTGCAGAAACCTCTTTCCTGAATGATACTGAAGAGAAGCTCATTAGCTTGATGGGTTTGTCCACAAGAAAGTTGGAGGATCAAACTCTTCCAGTTATAGATTCATCTCAATCCAAAACAAGTTTTGTTCCTGACAAATCCCGAGAGCAGTATATCAACGATGTTCAGAGCTGTATGAAGTATATCAAAGACGGGGAGAGCTACGAGCTTTGTCTCACTACTCAAAACAGAAGGAAAATAGGAAATGCTGATCCTTTGGGACTTTATCTCCACCTGAGAGAGAGGAATCCAGCACCATATGCAGCATTTCTCAACTTCTCAAATGCAAATCTGTCTTTATGCTCTTCGTCCCCTGAAAGGTTTCTTAAGCTGGACAGAAATGGAATGCTTGAAGCAAAGCCGATTAAGGGTACTATAGCTCGTGGCTCCACGCCTGAAGAAGATGAATTTCTTAAATTGCAATTGAAACTCAGTGAGAAGAATCAAGCCGAGAATCTGATGATTGTTGACCTTCTAAGGAATGATCTCGGTCGTGTCTGTGAGCCTGGCTCAGTCCATGTACCTAACCTCATGGATGTAGAATCATACACAACAGTACATACAATGGTGAGCACGATCCGTGGACTGAAAAAAACAGATATTAGTCCAGTGGAATGTGTAAGAGCTGCTTTCCCTGGCGGTTCAATGACTGGTGCCCCAAAACTAAGATCTGTTGAGATTCTCGATTCTCTAGAGAACTGTTCGAGAGGCCTTTACTCTGGCTCAATCGGGTATTTCTCGTATAATGGTACGTTTGATCTGAATATTGTGATAAGAACAGTAATAATACATGAAGATGAAGCTTCCATTGGAGCAGGAGGAGCTATTGTTGCATTATCAAGTCCAGAAGATGAGTTTGAGGAAATGATTCTTAAGACTAGAGCTCCTGCTAATGCAGTCATGGAGTTTTGTAGTGATCAGAGGAGACAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006575 GO:0006725 GO:0006732 GO:0006760 GO:0006766 GO:0006767 GO:0006807 GO:0008150 GO:0008152 GO:0008153 GO:0008483 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009108 GO:0009110 GO:0009396 GO:0009507 GO:0009536 GO:0009987 GO:0016053 GO:0016740 GO:0016769 GO:0017144 GO:0018130 GO:0019438 GO:0019752 GO:0032787 GO:0034641 GO:0042364 GO:0042398 GO:0042537 GO:0042558 GO:0042559 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0043648 GO:0043650 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046417 GO:0046482 GO:0046483 GO:0046653 GO:0046654 GO:0046655 GO:0046656 GO:0046820 GO:0051186 GO:0051188 GO:0071704 GO:0072330 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00790 map00790

Pfam Domains

Protein Families

Anth_synt_I_N Chorismate_bind GATase

Protein Analysis

919

Amino Acids

102.92

Weight (kDa)

6.18

Isoelectric Point (pI)

47.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GATase	PF00117	88 - 248	7.9e-29	Glutamine amidotransferase class-I
GATase	PF00117	293 - 332	1.2e-07	Glutamine amidotransferase class-I
Anth_synt_I_N	PF04715	439 - 589	9.8e-17	Anthranilate synthase component I, N terminal region
Chorismate_bind	PF00425	644 - 901	3.1e-84	chorismate binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009110)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G28880
fragaria_vesca	FvH4_7g19690
malus_domestica	MD01G1109300.v1.1 MD07G1175300.v1.1
prunus_persica	Prupe.2G214500_v2.0.a1
pyrus_communis	pycom01g13660 pycom07g16970
rosa_chinensis	RchiOBHm_Chr1g0363521
rosa_laevigata	RLG00000027559
rosa_multiflora	Rmu_ssc0000433.1_g000001
rosa_roxburghii	Rroxscaffold_4G00293090
rosa_rugosa	Rorug01G0308100
rosa_samantha	Rh1AG316800 Rh1BG280200 Rh1CG296300 Rh1DG311400 Rh5DG228600
rosa_wichuraiana	Rw0G000800 Rw1G028080 Rw2G022180 Rw3G029370 Rw5G038670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1069
AatII	GACGTC	1 cut(s)	1200
Acc16I	TGCGCA	1 cut(s)	1281
Acc36I	ACCTGC	1 cut(s)	1069
AccB1I	GGYRCC	2 cut(s)	1081, 2480
AccB7I	CCANNNNNTGG	1 cut(s)	581
AccI	GTMKAC	1 cut(s)	1194
AciI	CCGC	5 cut(s)	1404, 1478, 1620, 1721, 2466
AclWI	GGATC	5 cut(s)	820, 1423, 1875, 2033, 2398
AcoI	YGGCCR	1 cut(s)	520
AcsI	RAATTY	4 cut(s)	10, 766, 991, 2234
AcuI	CTGAAG	2 cut(s)	1839, 2244
AcyI	GRCGYC	3 cut(s)	161, 510, 1197
AfaI	GTAC	7 cut(s)	316, 717, 1129, 2200, 2349, 2385, 2578
AfiI	CCNNNNNNNGG	6 cut(s)	431, 506, 581, 932, 2145, 2195
AflII	CTTAAG	2 cut(s)	2153, 2699
AjiI	CACGTC	1 cut(s)	363
AjnI	CCWGG	6 cut(s)	178, 424, 430, 525, 2332, 2461
AjuI	GAANNNNNNNTTGG	4 cut(s)	1511, 1543, 2619, 2651
Alw21I	GWGCWC	3 cut(s)	553, 2402, 2713
Alw26I	GTCTC	3 cut(s)	1170, 2006, 2746
AlwI	GGATC	5 cut(s)	820, 1423, 1875, 2033, 2398
AlwNI	CAGNNNCTG	1 cut(s)	310
Ama87I	CYCGRG	1 cut(s)	1929
AoxI	GGCC	3 cut(s)	520, 857, 2536
ApeKI	GCWGC	2 cut(s)	2090, 2453
ApoI	RAATTY	4 cut(s)	10, 766, 991, 2234
AseI	ATTAAT	2 cut(s)	321, 1677
Asp700I	GAANNNNTTC	7 cut(s)	113, 1138, 1523, 1539, 1592, 2148, 2694
AspLEI	GCGC	1 cut(s)	1282
AspS9I	GGNCC	1 cut(s)	428
AsuC2I	CCSGG	2 cut(s)	569, 640
AsuHPI	GGTGA	1 cut(s)	2407
AsuII	TTCGAA	1 cut(s)	1596
AvaI	CYCGRG	1 cut(s)	1929
AvaII	GGWCC	1 cut(s)	428
BaeGI	GKGCMC	1 cut(s)	2485
BaeI	ACNNNNGTAYC	2 cut(s)	1618, 1651
BalI	TGGCCA	1 cut(s)	522
BanI	GGYRCC	2 cut(s)	1081, 2480
BanII	GRGCYC	3 cut(s)	553, 800, 2713
BauI	CACGAG	1 cut(s)	2208
BbsI	GAAGAC	1 cut(s)	461
Bbv12I	GWGCWC	3 cut(s)	553, 2402, 2713
BbvCI	CCTCAGC	1 cut(s)	1247
BbvI	GCAGC	2 cut(s)	2102, 2440
BccI	CCATC	3 cut(s)	602, 643, 1834
BceAI	ACGGC	2 cut(s)	153, 474
BciT130I	CCWGG	6 cut(s)	180, 426, 432, 527, 2334, 2463
BciVI	GTATCC	2 cut(s)	1351, 1619
BclI	TGATCA	4 cut(s)	681, 1450, 1741, 2743
BcnI	CCSGG	2 cut(s)	569, 640
BcoDI	GTCTC	3 cut(s)	1170, 2006, 2746
BfaI	CTAG	9 cut(s)	506, 533, 1116, 1122, 1143, 1368, 1380, 2519, 2706
BfmI	CTRYAG	2 cut(s)	1791, 2202
BfrI	CTTAAG	2 cut(s)	2153, 2699
BfuAI	ACCTGC	1 cut(s)	1069
BfuI	GTATCC	2 cut(s)	1351, 1619
BglII	AGATCT	1 cut(s)	2495
BisI	GCNGC	2 cut(s)	2091, 2454
BlsI	GCNGC	2 cut(s)	2092, 2455
BmcAI	AGTACT	1 cut(s)	316
Bme1390I	CCNGG	8 cut(s)	180, 426, 432, 527, 569, 640, 2334, 2463
Bme18I	GGWCC	1 cut(s)	428
BmeT110I	CYCGRG	1 cut(s)	1929
BmgBI	CACGTC	1 cut(s)	363
BmgT120I	GGNCC	1 cut(s)	428
BmiI	GGNNCC	6 cut(s)	573, 797, 1083, 1157, 2215, 2482
BmrFI	CCNGG	8 cut(s)	180, 426, 432, 527, 569, 640, 2334, 2463
BmrI	ACTGGG	1 cut(s)	801
BmsI	GCATC	3 cut(s)	915, 1078, 1693
BmuI	ACTGGG	1 cut(s)	801
BpiI	GAAGAC	1 cut(s)	461
BplI	GAGNNNNNCTC	2 cut(s)	2321, 2353
BpmI	CTGGAG	1 cut(s)	1683
Bpu10I	CCTNAGC	1 cut(s)	1247
Bpu14I	TTCGAA	1 cut(s)	1596
BpuMI	CCSGG	2 cut(s)	569, 640
BsaAI	YACGTR	1 cut(s)	1630
BsaHI	GRCGYC	3 cut(s)	161, 510, 1197
BsaJI	CCNNGG	7 cut(s)	179, 517, 544, 567, 580, 2407, 2461
BsaXI	ACNNNNNCTCC	8 cut(s)	540, 570, 2040, 2070, 2640, 2670, 2695, 2725
Bsc4I	CCNNNNNNNGG	6 cut(s)	431, 506, 581, 932, 2145, 2195
Bse1I	ACTGG	6 cut(s)	575, 751, 796, 1880, 2435, 2482
BseBI	CCWGG	6 cut(s)	180, 426, 432, 527, 2334, 2463
BseDI	CCNNGG	7 cut(s)	179, 517, 544, 567, 580, 2407, 2461
BseGI	GGATG	4 cut(s)	635, 946, 1037, 2368
BseLI	CCNNNNNNNGG	6 cut(s)	431, 506, 581, 932, 2145, 2195
BseNI	ACTGG	6 cut(s)	575, 751, 796, 1880, 2435, 2482
BseRI	GAGGAG	1 cut(s)	2661
BseSI	GKGCMC	1 cut(s)	2485
BseXI	GCAGC	2 cut(s)	2102, 2440
Bsh1285I	CGRYCG	1 cut(s)	2320
BshFI	GGCC	3 cut(s)	522, 859, 2538
BshNI	GGYRCC	2 cut(s)	1081, 2480
BsiEI	CGRYCG	1 cut(s)	2320
BsiHKAI	GWGCWC	3 cut(s)	553, 2402, 2713
BsiHKCI	CYCGRG	1 cut(s)	1929
BsiSI	CCGG	2 cut(s)	569, 639
BslFI	GGGAC	4 cut(s)	850, 1494, 2061, 2122
BslI	CCNNNNNNNGG	6 cut(s)	431, 506, 581, 932, 2145, 2195
BsmAI	GTCTC	3 cut(s)	1170, 2006, 2746
BsmFI	GGGAC	4 cut(s)	850, 1494, 2061, 2122
BsmI	GAATGC	4 cut(s)	491, 913, 1674, 2178
BsnI	GGCC	3 cut(s)	522, 859, 2538
BsoBI	CYCGRG	1 cut(s)	1929
Bsp119I	TTCGAA	1 cut(s)	1596
Bsp1286I	GDGCHC	5 cut(s)	553, 800, 2402, 2485, 2713
Bsp1407I	TGTACA	1 cut(s)	1127
Bsp19I	CCATGG	2 cut(s)	544, 580
BspACI	CCGC	5 cut(s)	1404, 1478, 1620, 1721, 2466
BspANI	GGCC	3 cut(s)	522, 859, 2538
BspLI	GGNNCC	6 cut(s)	573, 797, 1083, 1157, 2215, 2482
BspMAI	CTGCAG	1 cut(s)	1795
BspMI	ACCTGC	1 cut(s)	1069
BspPI	GGATC	5 cut(s)	820, 1423, 1875, 2033, 2398
BspQI	GCTCTTC	1 cut(s)	2137
BspT104I	TTCGAA	1 cut(s)	1596
BspT107I	GGYRCC	2 cut(s)	1081, 2480
BspTI	CTTAAG	2 cut(s)	2153, 2699
BsrGI	TGTACA	1 cut(s)	1127
BsrI	ACTGG	6 cut(s)	575, 751, 796, 1880, 2435, 2482
BssECI	CCNNGG	7 cut(s)	179, 517, 544, 567, 580, 2407, 2461
BssNI	GRCGYC	3 cut(s)	161, 510, 1197
BssSI	CACGAG	1 cut(s)	2208
BssT1I	CCWWGG	3 cut(s)	517, 544, 580
Bst2BI	CACGAG	1 cut(s)	2208
Bst2UI	CCWGG	6 cut(s)	180, 426, 432, 527, 2334, 2463
Bst4CI	ACNGT	6 cut(s)	588, 942, 1009, 2383, 2528, 2608
Bst6I	CTCTTC	7 cut(s)	206, 220, 1593, 1776, 1815, 1881, 2137
BstACI	GRCGYC	3 cut(s)	161, 510, 1197
BstAFI	CTTAAG	2 cut(s)	2153, 2699
BstAPI	GCANNNNNTGC	1 cut(s)	2087
BstAUI	TGTACA	1 cut(s)	1127
BstBAI	YACGTR	1 cut(s)	1630
BstBI	TTCGAA	1 cut(s)	1596
BstC8I	GCNNGC	1 cut(s)	564
BstDSI	CCRYGG	3 cut(s)	544, 580, 2407
BstF5I	GGATG	4 cut(s)	635, 946, 1037, 2368
BstHHI	GCGC	1 cut(s)	1282
BstMAI	GTCTC	3 cut(s)	1170, 2006, 2746
BstMCI	CGRYCG	1 cut(s)	2320
BstMWI	GCNNNNNNNGC	4 cut(s)	1703, 2087, 2648, 2657
BstNI	CCWGG	6 cut(s)	180, 426, 432, 527, 2334, 2463
BstNSI	RCATGY	4 cut(s)	566, 1078, 1478, 1710
BstSCI	CCNGG	8 cut(s)	178, 424, 430, 525, 567, 638, 2332, 2461
BstSFI	CTRYAG	2 cut(s)	1791, 2202
BstSLI	GKGCMC	1 cut(s)	2485
BstSNI	TACGTA	1 cut(s)	1630
BstV1I	GCAGC	2 cut(s)	2102, 2440
BstV2I	GAAGAC	1 cut(s)	461
BstX2I	RGATCY	3 cut(s)	812, 1415, 2495
BstXI	CCANNNNNNTGG	2 cut(s)	726, 875
BstYI	RGATCY	3 cut(s)	812, 1415, 2495
BsuI	GTATCC	2 cut(s)	1351, 1619
BsuRI	GGCC	3 cut(s)	522, 859, 2538
BtgI	CCRYGG	3 cut(s)	544, 580, 2407
BtrI	CACGTC	1 cut(s)	363
BtsCI	GGATG	4 cut(s)	635, 946, 1037, 2368
BtsI	GCAGTG	1 cut(s)	1065
BtsIMutI	CAGTG	6 cut(s)	677, 744, 789, 1065, 2266, 2442
BveI	ACCTGC	1 cut(s)	1069
Cac8I	GCNNGC	1 cut(s)	564
CaiI	CAGNNNCTG	1 cut(s)	310
CfoI	GCGC	1 cut(s)	1282
Cfr13I	GGNCC	1 cut(s)	428
CseI	GACGC	3 cut(s)	150, 499, 1034
CsiI	ACCWGGT	1 cut(s)	430
Csp6I	GTAC	7 cut(s)	315, 716, 1128, 2199, 2348, 2384, 2577
CviQI	GTAC	7 cut(s)	315, 716, 1128, 2199, 2348, 2384, 2577
DraI	TTTAAA	1 cut(s)	988
EaeI	YGGCCR	1 cut(s)	520
Eam1104I	CTCTTC	7 cut(s)	206, 220, 1593, 1776, 1815, 1881, 2137
EarI	CTCTTC	7 cut(s)	206, 220, 1593, 1776, 1815, 1881, 2137
Ecl136II	GAGCTC	2 cut(s)	551, 2711
Eco105I	TACGTA	1 cut(s)	1630
Eco130I	CCWWGG	3 cut(s)	517, 544, 580
Eco147I	AGGCCT	1 cut(s)	2538
Eco24I	GRGCYC	3 cut(s)	553, 800, 2713
Eco32I	GATATC	1 cut(s)	496
Eco47I	GGWCC	1 cut(s)	428
Eco53kI	GAGCTC	2 cut(s)	551, 2711
Eco57I	CTGAAG	2 cut(s)	1839, 2244
Eco88I	CYCGRG	1 cut(s)	1929
EcoICRI	GAGCTC	2 cut(s)	551, 2711
EcoRI	GAATTC	1 cut(s)	766
EcoRII	CCWGG	6 cut(s)	178, 424, 430, 525, 2332, 2461
EcoRV	GATATC	1 cut(s)	496
EcoT14I	CCWWGG	3 cut(s)	517, 544, 580
EcoT22I	ATGCAT	2 cut(s)	915, 1708
EcoT38I	GRGCYC	3 cut(s)	553, 800, 2713
ErhI	CCWWGG	3 cut(s)	517, 544, 580
FalI	AAGNNNNNCTT	4 cut(s)	1527, 1559, 2440, 2472
FaqI	GGGAC	4 cut(s)	850, 1494, 2061, 2122
FauI	CCCGC	1 cut(s)	1471
FauNDI	CATATG	1 cut(s)	2086
FbaI	TGATCA	4 cut(s)	681, 1450, 1741, 2743
FblI	GTMKAC	1 cut(s)	1194
Fnu4HI	GCNGC	2 cut(s)	2091, 2454
FokI	GGATG	4 cut(s)	622, 933, 1024, 2375
FriOI	GRGCYC	3 cut(s)	553, 800, 2713
Fsp4HI	GCNGC	2 cut(s)	2091, 2454
FspBI	CTAG	9 cut(s)	506, 533, 1116, 1122, 1143, 1368, 1380, 2519, 2706
FspI	TGCGCA	1 cut(s)	1281
GlaI	GCGC	1 cut(s)	1281
GluI	GCNGC	2 cut(s)	2091, 2454
GsuI	CTGGAG	1 cut(s)	1683
HaeIII	GGCC	3 cut(s)	522, 859, 2538
HapII	CCGG	2 cut(s)	569, 639
HgaI	GACGC	3 cut(s)	150, 499, 1034
HhaI	GCGC	1 cut(s)	1282
Hin1I	GRCGYC	3 cut(s)	161, 510, 1197
Hin6I	GCGC	1 cut(s)	1280
HinP1I	GCGC	1 cut(s)	1280
HincII	GTYRAC	1 cut(s)	2296
HindII	GTYRAC	1 cut(s)	2296
HindIII	AAGCTT	3 cut(s)	242, 372, 2628
HpaII	CCGG	2 cut(s)	569, 639
HphI	GGTGA	1 cut(s)	2407
Hpy166II	GTNNAC	9 cut(s)	125, 218, 360, 729, 938, 1195, 1851, 2296, 2411
Hpy8I	GTNNAC	9 cut(s)	125, 218, 360, 729, 938, 1195, 1851, 2296, 2411
Hpy99I	CGWCG	1 cut(s)	1050
HpyAV	CCTTC	6 cut(s)	145, 870, 1529, 1582, 2013, 2309
HpyCH4III	ACNGT	6 cut(s)	588, 942, 1009, 2383, 2528, 2608
HpyCH4IV	ACGT	6 cut(s)	362, 1197, 1273, 1629, 1758, 2579
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1703, 2087, 2648, 2657
HpySE526I	ACGT	6 cut(s)	362, 1197, 1273, 1629, 1758, 2579
Hsp92I	GRCGYC	3 cut(s)	161, 510, 1197
HspAI	GCGC	1 cut(s)	1280
Ksp22I	TGATCA	4 cut(s)	681, 1450, 1741, 2743
LguI	GCTCTTC	1 cut(s)	2137
LmnI	GCTCC	8 cut(s)	548, 795, 1561, 1702, 2219, 2639, 2648, 2716
Lsp1109I	GCAGC	2 cut(s)	2102, 2440
LweI	GCATC	3 cut(s)	915, 1078, 1693
MabI	ACCWGGT	1 cut(s)	430
MaeI	CTAG	9 cut(s)	506, 533, 1116, 1122, 1143, 1368, 1380, 2519, 2706
MaeII	ACGT	6 cut(s)	362, 1197, 1273, 1629, 1758, 2579
MaeIII	GTNAC	3 cut(s)	1370, 1462, 1682
MfeI	CAATTG	3 cut(s)	1097, 1430, 2249
MflI	RGATCY	3 cut(s)	812, 1415, 2495
MhlI	GDGCHC	5 cut(s)	553, 800, 2402, 2485, 2713
MlsI	TGGCCA	1 cut(s)	522
MluNI	TGGCCA	1 cut(s)	522
MlyI	GAGTC	1 cut(s)	1030
MmeI	TCCRAC	2 cut(s)	1716, 1842
Mox20I	TGGCCA	1 cut(s)	522
Mph1103I	ATGCAT	2 cut(s)	915, 1708
MroXI	GAANNNNTTC	7 cut(s)	113, 1138, 1523, 1539, 1592, 2148, 2694
MscI	TGGCCA	1 cut(s)	522
MslI	CAYNNNNRTG	5 cut(s)	873, 899, 1007, 1079, 2622
Msp20I	TGGCCA	1 cut(s)	522
MspA1I	CMGCKG	1 cut(s)	452
MspCI	CTTAAG	2 cut(s)	2153, 2699
MspI	CCGG	2 cut(s)	569, 639
MspR9I	CCNGG	8 cut(s)	180, 426, 432, 527, 569, 640, 2334, 2463
MunI	CAATTG	3 cut(s)	1097, 1430, 2249
Mva1269I	GAATGC	4 cut(s)	491, 913, 1674, 2178
MvaI	CCWGG	6 cut(s)	180, 426, 432, 527, 2334, 2463
MwoI	GCNNNNNNNGC	4 cut(s)	1703, 2087, 2648, 2657
NciI	CCSGG	2 cut(s)	569, 640
NcoI	CCATGG	2 cut(s)	544, 580
NdeI	CATATG	1 cut(s)	2086
NlaIV	GGNNCC	6 cut(s)	573, 797, 1083, 1157, 2215, 2482
NmeAIII	GCCGAG	1 cut(s)	2302
NmuCI	GTSAC	2 cut(s)	1370, 1682
NsbI	TGCGCA	1 cut(s)	1281
NsiI	ATGCAT	2 cut(s)	915, 1708
NspI	RCATGY	4 cut(s)	566, 1078, 1478, 1710
NspV	TTCGAA	1 cut(s)	1596
PaeI	GCATGC	1 cut(s)	566
PaqCI	CACCTGC	1 cut(s)	1069
PceI	AGGCCT	1 cut(s)	2538
PciSI	GCTCTTC	1 cut(s)	2137
PctI	GAATGC	4 cut(s)	491, 913, 1674, 2178
PdmI	GAANNNNTTC	7 cut(s)	113, 1138, 1523, 1539, 1592, 2148, 2694
PflMI	CCANNNNNTGG	1 cut(s)	581
PfoI	TCCNGGA	1 cut(s)	638
PkrI	GCNGC	2 cut(s)	2092, 2455
PleI	GAGTC	1 cut(s)	1029
PpsI	GAGTC	1 cut(s)	1029
Ppu21I	YACGTR	1 cut(s)	1630
PshBI	ATTAAT	2 cut(s)	321, 1677
Psp124BI	GAGCTC	2 cut(s)	553, 2713
Psp6I	CCWGG	6 cut(s)	178, 424, 430, 525, 2332, 2461
PspGI	CCWGG	6 cut(s)	178, 424, 430, 525, 2332, 2461
PspN4I	GGNNCC	6 cut(s)	573, 797, 1083, 1157, 2215, 2482
PspPI	GGNCC	1 cut(s)	428
PsrI	GAACNNNNNNTAC	2 cut(s)	1111, 1143
PstI	CTGCAG	1 cut(s)	1795
PstNI	CAGNNNCTG	1 cut(s)	310
PsuI	RGATCY	3 cut(s)	812, 1415, 2495
PvuII	CAGCTG	1 cut(s)	452
RsaI	GTAC	7 cut(s)	316, 717, 1129, 2200, 2349, 2385, 2578
RsaNI	GTAC	7 cut(s)	315, 716, 1128, 2199, 2348, 2384, 2577
RseI	CAYNNNNRTG	5 cut(s)	873, 899, 1007, 1079, 2622
SacI	GAGCTC	2 cut(s)	553, 2713
SapI	GCTCTTC	1 cut(s)	2137
SatI	GCNGC	2 cut(s)	2091, 2454
Sau96I	GGNCC	1 cut(s)	428
ScaI	AGTACT	1 cut(s)	316
SchI	GAGTC	1 cut(s)	1030
ScrFI	CCNGG	8 cut(s)	180, 426, 432, 527, 569, 640, 2334, 2463
SduI	GDGCHC	5 cut(s)	553, 800, 2402, 2485, 2713
SexAI	ACCWGGT	1 cut(s)	430
SfaNI	GCATC	3 cut(s)	915, 1078, 1693
SfcI	CTRYAG	2 cut(s)	1791, 2202
SfuI	TTCGAA	1 cut(s)	1596
SinI	GGWCC	1 cut(s)	428
SmiMI	CAYNNNNRTG	5 cut(s)	873, 899, 1007, 1079, 2622
SmlI	CTYRAG	2 cut(s)	2153, 2699
SmoI	CTYRAG	2 cut(s)	2153, 2699
SnaBI	TACGTA	1 cut(s)	1630
SphI	GCATGC	1 cut(s)	566
SseBI	AGGCCT	1 cut(s)	2538
SsiI	CCGC	5 cut(s)	1404, 1478, 1620, 1721, 2466
SspI	AATATT	2 cut(s)	412, 2593
SspMI	CTAG	9 cut(s)	506, 533, 1116, 1122, 1143, 1368, 1380, 2519, 2706
SstI	GAGCTC	2 cut(s)	553, 2713
StuI	AGGCCT	1 cut(s)	2538
StyD4I	CCNGG	8 cut(s)	178, 424, 430, 525, 567, 638, 2332, 2461
StyI	CCWWGG	3 cut(s)	517, 544, 580
TaaI	ACNGT	6 cut(s)	588, 942, 1009, 2383, 2528, 2608
TaiI	ACGT	6 cut(s)	365, 1200, 1276, 1632, 1761, 2582
TaqI	TCGA	6 cut(s)	847, 1048, 1596, 1752, 2511, 2531
TaqII	GACCGA	1 cut(s)	2306
TatI	WGTACW	3 cut(s)	314, 1127, 2383
TscAI	CASTG	6 cut(s)	684, 751, 796, 1072, 2266, 2442
TseFI	GTSAC	2 cut(s)	1370, 1682
TseI	GCWGC	2 cut(s)	2090, 2453
Tsp45I	GTSAC	2 cut(s)	1370, 1682
TspGWI	ACGGA	3 cut(s)	825, 1544, 2396
TspRI	CASTG	6 cut(s)	684, 751, 796, 1072, 2266, 2442
Van91I	CCANNNNNTGG	1 cut(s)	581
Vha464I	CTTAAG	2 cut(s)	2153, 2699
VpaK11BI	GGWCC	1 cut(s)	428
VspI	ATTAAT	2 cut(s)	321, 1677
XapI	RAATTY	4 cut(s)	10, 766, 991, 2234
XbaI	TCTAGA	2 cut(s)	1115, 2518
XceI	RCATGY	4 cut(s)	566, 1078, 1478, 1710
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1858
XmiI	GTMKAC	1 cut(s)	1194
XmnI	GAANNNNTTC	7 cut(s)	113, 1138, 1523, 1539, 1592, 2148, 2694
XspI	CTAG	9 cut(s)	506, 533, 1116, 1122, 1143, 1368, 1380, 2519, 2706
ZraI	GACGTC	1 cut(s)	1198
ZrmI	AGTACT	1 cut(s)	316
Zsp2I	ATGCAT	2 cut(s)	915, 1708

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.