AT2G30490

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
12993625 .. 12996012
2388 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G30490.1

Sequence Viewer

Length: 1518 bp
ATGGACCTCCTCTTGCTGGAGAAGTCTTTAATCGCCGTCTTCGTGGCGGTGATTCTCGCCACGGTGATTTCAAAGCTCCGCGGCAAGAAATTGAAGCTACCTCCAGGTCCTATACCAATTCCGATCTTCGGAAACTGGCTTCAAGTCGGAGATGATCTCAACCACCGTAATCTCGTCGATTACGCTAAGAAATTCGGCGATCTCTTCCTCCTCCGTATGGGTCAGCGAAACCTAGTCGTCGTCTCCTCACCGGATCTAACAAAGGAAGTGCTCCTCACTCAAGGCGTTGAGTTTGGATCCAGAACGAGAAACGTCGTGTTCGACATTTTCACCGGGAAAGGTCAAGATATGGTGTTCACTGTTTACGGCGAGCATTGGAGGAAGATGAGAAGAATCATGACGGTTCCTTTCTTCACCAACAAAGTTGTTCAACAGAATCGTGAAGGTTGGGAGTTTGAAGCAGCTAGTGTTGTTGAAGATGTTAAGAAGAATCCAGATTCTGCTACGAAAGGAATCGTGTTGAGGAAACGTTTGCAATTGATGATGTATAACAATATGTTCCGTATCATGTTCGATAGAAGATTTGAGAGTGAGGATGATCCTCTTTTCCTTAGGCTTAAGGCTTTGAATGGTGAGAGAAGTCGATTAGCTCAGAGCTTTGAGTATAACTATGGAGATTTCATTCCTATCCTTAGACCATTCCTCAGAGGCTATTTGAAGATTTGTCAAGATGTGAAAGATCGAAGAATCGCTCTTTTCAAGAAGTACTTTGTTGATGAGAGGAAGCAAATTGCGAGTTCTAAGCCTACAGGTAGTGAAGGATTGAAATGTGCCATTGATCACATCCTTGAAGCTGAGCAGAAGGGAGAAATCAACGAGGACAATGTTCTTTACATCGTCGAGAACATCAATGTCGCCGCGATTGAGACAACATTGTGGTCTATCGAGTGGGGAATTGCAGAGCTAGTGAACCATCCTGAAATCCAGAGTAAGCTAAGGAACGAACTCGACACAGTTCTTGGACCGGGTGTGCAAGTCACCGAGCCTGATCTTCACAAACTTCCATACCTTCAAGCTGTGGTTAAGGAGACTCTTCGTCTGAGAATGGCGATTCCTCTCCTCGTGCCTCACATGAACCTCCATGATGCGAAGCTCGCTGGCTACGATATCCCAGCAGAAAGCAAAATCCTTGTTAATGCTTGGTGGCTAGCAAACAACCCCAACAGCTGGAAGAAGCCTGAAGAGTTTAGACCAGAGAGGTTCTTTGAAGAAGAATCGCACGTGGAAGCTAACGGTAATGACTTCAGGTATGTGCCATTTGGTGTTGGACGTCGAAGCTGTCCCGGGATTATATTGGCATTGCCTATTTTGGGGATCACCATTGGTAGGATGGTCCAGAACTTCGAGCTTCTTCCTCCTCCAGGACAGTCTAAAGTGGATACTAGTGAGAAAGGTGGACAATTCAGCTTGCACATCCTTAACCACTCCATAATCGTTATGAAACCAAGGAACTGTTAA

Protein Analysis

505

Amino Acids

57.79

Weight (kDa)

8.89

Isoelectric Point (pI)

43.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 34 - 497 2e-116 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1333
AccB7I CCANNNNNTGG 1 cut(s) 1227
AccII CGCG 2 cut(s) 81, 920
AciI CCGC 4 cut(s) 47, 79, 81, 918
AclI AACGTT 1 cut(s) 529
AclWI GGATC 5 cut(s) 261, 291, 304, 593, 1382
AcsI RAATTY 1 cut(s) 191
AcuI CTGAAG 2 cut(s) 1260, 1288
AcvI CACGTG 1 cut(s) 1282
AcyI GRCGYC 1 cut(s) 1330
AfaI GTAC 1 cut(s) 767
AfiI CCNNNNNNNGG 7 cut(s) 16, 128, 217, 1227, 1370, 1386, 1421
AflII CTTAAG 1 cut(s) 617
AhdI GACNNNNNGTC 1 cut(s) 1095
AhlI ACTAGT 1 cut(s) 1442
AjnI CCWGG 2 cut(s) 103, 1420
Alw21I GWGCWC 1 cut(s) 273
Alw26I GTCTC 3 cut(s) 247, 920, 1082
AlwI GGATC 5 cut(s) 261, 291, 304, 593, 1382
AlwNI CAGNNNCTG 1 cut(s) 500
Ama87I CYCGRG 1 cut(s) 1343
ApeKI GCWGC 1 cut(s) 461
ApoI RAATTY 1 cut(s) 191
AspS9I GGNCC 4 cut(s) 4, 107, 1022, 1393
AsuC2I CCSGG 4 cut(s) 334, 1026, 1344, 1345
AsuHPI GGTGA 8 cut(s) 61, 76, 240, 322, 406, 644, 1030, 1369
AsuNHI GCTAGC 1 cut(s) 1207
AvaI CYCGRG 1 cut(s) 1343
AvaII GGWCC 4 cut(s) 4, 107, 1022, 1393
AxyI CCTNAGG 1 cut(s) 611
BamHI GGATCC 1 cut(s) 296
BauI CACGAG 1 cut(s) 1121
BbrPI CACGTG 1 cut(s) 1282
BbsI GAAGAC 1 cut(s) 31
Bbv12I GWGCWC 1 cut(s) 273
BbvI GCAGC 1 cut(s) 473
BccI CCATC 2 cut(s) 981, 1384
BceAI ACGGC 2 cut(s) 20, 382
BciT130I CCWGG 2 cut(s) 105, 1422
BciVI GTATCC 1 cut(s) 1432
BclI TGATCA 1 cut(s) 838
BcnI CCSGG 4 cut(s) 334, 1026, 1344, 1345
BcoDI GTCTC 3 cut(s) 247, 920, 1082
BcuI ACTAGT 1 cut(s) 1442
BfaI CTAG 5 cut(s) 233, 465, 965, 1208, 1443
BfmI CTRYAG 1 cut(s) 807
BfrI CTTAAG 1 cut(s) 617
BfuI GTATCC 1 cut(s) 1432
BisI GCNGC 3 cut(s) 82, 462, 918
BlpI GCTNAGC 1 cut(s) 855
BlsI GCNGC 3 cut(s) 83, 463, 919
BmcAI AGTACT 1 cut(s) 767
Bme1390I CCNGG 6 cut(s) 105, 334, 1026, 1344, 1345, 1422
Bme18I GGWCC 4 cut(s) 4, 107, 1022, 1393
BmeRI GACNNNNNGTC 1 cut(s) 1095
BmeT110I CYCGRG 1 cut(s) 1343
BmgT120I GGNCC 4 cut(s) 4, 107, 1022, 1393
BmiI GGNNCC 2 cut(s) 298, 405
BmrFI CCNGG 6 cut(s) 105, 334, 1026, 1344, 1345, 1422
BmsI GCATC 1 cut(s) 1135
BmtI GCTAGC 1 cut(s) 1211
BpiI GAAGAC 1 cut(s) 31
BplI GAGNNNNNCTC 2 cut(s) 141, 173
BpmI CTGGAG 3 cut(s) 38, 87, 1404
Bpu10I CCTNAGC 1 cut(s) 995
Bpu1102I GCTNAGC 1 cut(s) 855
BpuEI CTTGAG 1 cut(s) 264
BpuMI CCSGG 4 cut(s) 334, 1026, 1344, 1345
BsaAI YACGTR 1 cut(s) 1282
BsaHI GRCGYC 1 cut(s) 1330
BsaJI CCNNGG 4 cut(s) 60, 79, 1343, 1505
BsaWI WCCGGW 1 cut(s) 250
Bsc4I CCNNNNNNNGG 7 cut(s) 16, 128, 217, 1227, 1370, 1386, 1421
Bse1I ACTGG 1 cut(s) 140
Bse21I CCTNAGG 1 cut(s) 611
Bse3DI GCAATG 1 cut(s) 1358
BseBI CCWGG 2 cut(s) 105, 1422
BseDI CCNNGG 4 cut(s) 60, 79, 1343, 1505
BseGI GGATG 5 cut(s) 601, 843, 973, 1395, 1473
BseLI CCNNNNNNNGG 7 cut(s) 16, 128, 217, 1227, 1370, 1386, 1421
BseMI GCAATG 1 cut(s) 1358
BseMII CTCAG 4 cut(s) 665, 718, 846, 1091
BseNI ACTGG 1 cut(s) 140
BseRI GAGGAG 5 cut(s) 200, 235, 263, 1109, 1407
BseXI GCAGC 1 cut(s) 473
BseYI CCCAGC 1 cut(s) 1171
Bsh1236I CGCG 2 cut(s) 81, 920
BsiHKAI GWGCWC 1 cut(s) 273
BsiHKCI CYCGRG 1 cut(s) 1343
BsiSI CCGG 4 cut(s) 251, 333, 1025, 1344
BslFI GGGAC 1 cut(s) 1326
BslI CCNNNNNNNGG 7 cut(s) 16, 128, 217, 1227, 1370, 1386, 1421
BsmAI GTCTC 3 cut(s) 247, 920, 1082
BsmBI CGTCTC 1 cut(s) 247
BsmFI GGGAC 1 cut(s) 1326
BsoBI CYCGRG 1 cut(s) 1343
Bsp1286I GDGCHC 1 cut(s) 273
Bsp1720I GCTNAGC 1 cut(s) 855
BspACI CCGC 4 cut(s) 47, 79, 81, 918
BspCNI CTCAG 4 cut(s) 664, 717, 847, 1092
BspFNI CGCG 2 cut(s) 81, 920
BspHI TCATGA 1 cut(s) 396
BspLI GGNNCC 2 cut(s) 298, 405
BspOI GCTAGC 1 cut(s) 1211
BspPI GGATC 5 cut(s) 261, 291, 304, 593, 1382
BspTI CTTAAG 1 cut(s) 617
BsrDI GCAATG 1 cut(s) 1358
BsrI ACTGG 1 cut(s) 140
BssECI CCNNGG 4 cut(s) 60, 79, 1343, 1505
BssNI GRCGYC 1 cut(s) 1330
BssSI CACGAG 1 cut(s) 1121
BssT1I CCWWGG 1 cut(s) 1505
Bst2BI CACGAG 1 cut(s) 1121
Bst2UI CCWGG 2 cut(s) 105, 1422
Bst4CI ACNGT 8 cut(s) 64, 167, 361, 403, 1015, 1295, 1428, 1514
Bst6I CTCTTC 3 cut(s) 209, 1098, 1236
BstACI GRCGYC 1 cut(s) 1330
BstAFI CTTAAG 1 cut(s) 617
BstBAI YACGTR 1 cut(s) 1282
BstC8I GCNNGC 5 cut(s) 371, 1155, 1159, 1209, 1469
BstDEI CTNAG 9 cut(s) 186, 611, 651, 692, 704, 801, 855, 995, 1100
BstDSI CCRYGG 2 cut(s) 60, 79
BstENI CCTNNNNNAGG 1 cut(s) 1419
BstF5I GGATG 5 cut(s) 601, 843, 973, 1395, 1473
BstFNI CGCG 2 cut(s) 81, 920
BstMAI GTCTC 3 cut(s) 247, 920, 1082
BstMWI GCNNNNNNNGC 1 cut(s) 1154
BstNI CCWGG 2 cut(s) 105, 1422
BstSCI CCNGG 6 cut(s) 103, 332, 1024, 1342, 1343, 1420
BstSFI CTRYAG 1 cut(s) 807
BstUI CGCG 2 cut(s) 81, 920
BstV1I GCAGC 1 cut(s) 473
BstV2I GAAGAC 1 cut(s) 31
BstX2I RGATCY 2 cut(s) 253, 296
BstYI RGATCY 2 cut(s) 253, 296
Bsu36I CCTNAGG 1 cut(s) 611
BsuI GTATCC 1 cut(s) 1432
BtgI CCRYGG 2 cut(s) 60, 79
BtsCI GGATG 5 cut(s) 601, 843, 973, 1395, 1473
BtsIMutI CAGTG 1 cut(s) 357
Cac8I GCNNGC 5 cut(s) 371, 1155, 1159, 1209, 1469
CaiI CAGNNNCTG 1 cut(s) 500
CciI TCATGA 1 cut(s) 396
Cfr13I GGNCC 4 cut(s) 4, 107, 1022, 1393
Cfr42I CCGCGG 1 cut(s) 82
Cfr9I CCCGGG 1 cut(s) 1343
Csp6I GTAC 1 cut(s) 766
CviAII CATG 4 cut(s) 397, 568, 1132, 1142
CviQI GTAC 1 cut(s) 766
DdeI CTNAG 9 cut(s) 186, 611, 651, 692, 704, 801, 855, 995, 1100
DriI GACNNNNNGTC 1 cut(s) 1095
Eam1104I CTCTTC 3 cut(s) 209, 1098, 1236
Eam1105I GACNNNNNGTC 1 cut(s) 1095
EarI CTCTTC 3 cut(s) 209, 1098, 1236
Eco130I CCWWGG 1 cut(s) 1505
Eco32I GATATC 1 cut(s) 1168
Eco47I GGWCC 4 cut(s) 4, 107, 1022, 1393
Eco57I CTGAAG 2 cut(s) 1260, 1288
Eco72I CACGTG 1 cut(s) 1282
Eco81I CCTNAGG 1 cut(s) 611
Eco88I CYCGRG 1 cut(s) 1343
EcoNI CCTNNNNNAGG 1 cut(s) 1419
EcoO109I RGGNCCY 1 cut(s) 107
EcoRII CCWGG 2 cut(s) 103, 1420
EcoRV GATATC 1 cut(s) 1168
EcoT14I CCWWGG 1 cut(s) 1505
ErhI CCWWGG 1 cut(s) 1505
Esp3I CGTCTC 1 cut(s) 247
FaeI CATG 4 cut(s) 400, 571, 1135, 1145
FalI AAGNNNNNCTT 2 cut(s) 752, 784
FaqI GGGAC 1 cut(s) 1326
FatI CATG 4 cut(s) 396, 567, 1131, 1141
FbaI TGATCA 1 cut(s) 838
Fnu4HI GCNGC 3 cut(s) 82, 462, 918
FokI GGATG 5 cut(s) 608, 830, 960, 1402, 1460
Fsp4HI GCNGC 3 cut(s) 82, 462, 918
FspBI CTAG 5 cut(s) 233, 465, 965, 1208, 1443
GluI GCNGC 3 cut(s) 82, 462, 918
GsaI CCCAGC 1 cut(s) 1175
GsuI CTGGAG 3 cut(s) 38, 87, 1404
HapII CCGG 4 cut(s) 251, 333, 1025, 1344
Hin1I GRCGYC 1 cut(s) 1330
Hin1II CATG 4 cut(s) 400, 571, 1135, 1145
HpaII CCGG 4 cut(s) 251, 333, 1025, 1344
HphI GGTGA 8 cut(s) 61, 76, 240, 322, 406, 644, 1030, 1369
Hpy166II GTNNAC 4 cut(s) 357, 364, 970, 1457
Hpy188I TCNGA 6 cut(s) 123, 131, 149, 654, 707, 1101
Hpy8I GTNNAC 4 cut(s) 357, 364, 970, 1457
Hpy99I CGWCG 5 cut(s) 179, 242, 317, 902, 1335
HpyAV CCTTC 4 cut(s) 437, 812, 856, 1079
HpyCH4III ACNGT 8 cut(s) 64, 167, 361, 403, 1015, 1295, 1428, 1514
HpyCH4IV ACGT 4 cut(s) 312, 529, 1281, 1330
HpyCH4V TGCA 4 cut(s) 535, 959, 1033, 1471
HpyF10VI GCNNNNNNNGC 1 cut(s) 1154
HpyF3I CTNAG 9 cut(s) 186, 611, 651, 692, 704, 801, 855, 995, 1100
HpySE526I ACGT 4 cut(s) 312, 529, 1281, 1330
Hsp92I GRCGYC 1 cut(s) 1330
Hsp92II CATG 4 cut(s) 400, 571, 1135, 1145
Ksp22I TGATCA 1 cut(s) 838
KspI CCGCGG 1 cut(s) 82
LmnI GCTCC 2 cut(s) 81, 276
Lsp1109I GCAGC 1 cut(s) 473
LweI GCATC 1 cut(s) 1135
MaeI CTAG 5 cut(s) 233, 465, 965, 1208, 1443
MaeII ACGT 4 cut(s) 312, 529, 1281, 1330
MaeIII GTNAC 1 cut(s) 1036
MfeI CAATTG 1 cut(s) 536
MflI RGATCY 2 cut(s) 253, 296
MhlI GDGCHC 1 cut(s) 273
MluCI AATT 7 cut(s) 89, 117, 191, 536, 789, 954, 1460
MlyI GAGTC 1 cut(s) 1084
MmeI TCCRAC 2 cut(s) 127, 1306
MseI TTAA 7 cut(s) 29, 483, 618, 1083, 1194, 1479, 1516
MspA1I CMGCKG 2 cut(s) 81, 1227
MspCI CTTAAG 1 cut(s) 617
MspI CCGG 4 cut(s) 251, 333, 1025, 1344
MspR9I CCNGG 6 cut(s) 105, 334, 1026, 1344, 1345, 1422
MunI CAATTG 1 cut(s) 536
MvaI CCWGG 2 cut(s) 105, 1422
MvnI CGCG 2 cut(s) 81, 920
MwoI GCNNNNNNNGC 1 cut(s) 1154
NciI CCSGG 4 cut(s) 334, 1026, 1344, 1345
NheI GCTAGC 1 cut(s) 1207
NlaIII CATG 4 cut(s) 400, 571, 1135, 1145
NlaIV GGNNCC 2 cut(s) 298, 405
NmuCI GTSAC 1 cut(s) 1036
PagI TCATGA 1 cut(s) 396
PcsI WCGNNNNNNNCGW 3 cut(s) 39, 318, 1161
PfeI GAWTC 9 cut(s) 52, 393, 436, 490, 497, 513, 747, 1111, 1274
PflMI CCANNNNNTGG 1 cut(s) 1227
PfoI TCCNGGA 1 cut(s) 1420
PkrI GCNGC 3 cut(s) 83, 463, 919
PleI GAGTC 1 cut(s) 1084
PmaCI CACGTG 1 cut(s) 1282
PmlI CACGTG 1 cut(s) 1282
PpsI GAGTC 1 cut(s) 1084
Ppu21I YACGTR 1 cut(s) 1282
PpuMI RGGWCCY 1 cut(s) 107
Psp1406I AACGTT 1 cut(s) 529
Psp5II RGGWCCY 1 cut(s) 107
Psp6I CCWGG 2 cut(s) 103, 1420
PspCI CACGTG 1 cut(s) 1282
PspFI CCCAGC 1 cut(s) 1171
PspGI CCWGG 2 cut(s) 103, 1420
PspN4I GGNNCC 2 cut(s) 298, 405
PspPI GGNCC 4 cut(s) 4, 107, 1022, 1393
PspPPI RGGWCCY 1 cut(s) 107
PstNI CAGNNNCTG 1 cut(s) 500
PsuI RGATCY 2 cut(s) 253, 296
PvuII CAGCTG 1 cut(s) 1227
RsaI GTAC 1 cut(s) 767
RsaNI GTAC 1 cut(s) 766
SacII CCGCGG 1 cut(s) 82
SaqAI TTAA 7 cut(s) 29, 483, 618, 1083, 1194, 1479, 1516
SatI GCNGC 3 cut(s) 82, 462, 918
Sau96I GGNCC 4 cut(s) 4, 107, 1022, 1393
ScaI AGTACT 1 cut(s) 767
SchI GAGTC 1 cut(s) 1084
ScrFI CCNGG 6 cut(s) 105, 334, 1026, 1344, 1345, 1422
SduI GDGCHC 1 cut(s) 273
SfaNI GCATC 1 cut(s) 1135
SfcI CTRYAG 1 cut(s) 807
Sfr303I CCGCGG 1 cut(s) 82
SgrBI CCGCGG 1 cut(s) 82
SinI GGWCC 4 cut(s) 4, 107, 1022, 1393
SmaI CCCGGG 1 cut(s) 1345
SmlI CTYRAG 2 cut(s) 279, 617
SmoI CTYRAG 2 cut(s) 279, 617
SpeI ACTAGT 1 cut(s) 1442
Sse9I AATT 7 cut(s) 89, 117, 191, 536, 789, 954, 1460
SsiI CCGC 4 cut(s) 47, 79, 81, 918
SspMI CTAG 5 cut(s) 233, 465, 965, 1208, 1443
StyD4I CCNGG 6 cut(s) 103, 332, 1024, 1342, 1343, 1420
StyI CCWWGG 1 cut(s) 1505
TaaI ACNGT 8 cut(s) 64, 167, 361, 403, 1015, 1295, 1428, 1514
TaiI ACGT 4 cut(s) 315, 532, 1284, 1333
TasI AATT 7 cut(s) 89, 117, 191, 536, 789, 954, 1460
TatI WGTACW 1 cut(s) 765
TauI GCSGC 2 cut(s) 84, 920
TfiI GAWTC 9 cut(s) 52, 393, 436, 490, 497, 513, 747, 1111, 1274
Tru1I TTAA 7 cut(s) 29, 483, 618, 1083, 1194, 1479, 1516
Tru9I TTAA 7 cut(s) 29, 483, 618, 1083, 1194, 1479, 1516
TscAI CASTG 1 cut(s) 364
TseFI GTSAC 1 cut(s) 1036
TseI GCWGC 1 cut(s) 461
Tsp45I GTSAC 1 cut(s) 1036
TspDTI ATGAA 3 cut(s) 670, 1148, 1514
TspGWI ACGGA 2 cut(s) 203, 551
TspMI CCCGGG 1 cut(s) 1343
TspRI CASTG 1 cut(s) 364
Van91I CCANNNNNTGG 1 cut(s) 1227
Vha464I CTTAAG 1 cut(s) 617
VpaK11BI GGWCC 4 cut(s) 4, 107, 1022, 1393
XagI CCTNNNNNAGG 1 cut(s) 1419
XapI RAATTY 1 cut(s) 191
XcmI CCANNNNNNNNNTGG 1 cut(s) 1387
XmaI CCCGGG 1 cut(s) 1343
XspI CTAG 5 cut(s) 233, 465, 965, 1208, 1443
ZraI GACGTC 1 cut(s) 1331
ZrmI AGTACT 1 cut(s) 767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.