Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0007364

Physical Location & Seq

Genomic Coordinates Forward (+)

4505770 .. 4510093

Gene Structure 4324 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1052900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

ATGGACCTCCTCCTCCTGGAAAAGACCCTTCTGGGTCTCTTCGTCGCCGTCATCGTCGCCATCGCCATTTCGAAACTCCGCGGCAAGAAATTCAAGCTCCCGCCGGGTCCCATACCCGTACCCGTATTCGGAAACTGGCTCCAGGTCGGTGACGACCTCAACCACCGCAACCTCACCGACATGGCCAAGAAATTCGGCGACTGCTTCCTCCTCCGCATGGGGCAGCGCAACCTCGTCGTCGTCTCCTCGCCGGAGCTGGCCAAGGAGGTCCTCCACACCCAGGGAGTCGAATTCGGGTCGAGGACCCGAAACGTCGTCTTTGATATTTTCACCGGTGAAGGCCAGGACATGGTGTTCACCGTCTACGGCGAGCACTGGCGGAAAATGCGGCGTATCATGACCGTCCCCTTCTTCACCAACAAGGTCGTCCAGCAGTACCGCTACGGATGGGAATCGGAGGCGGCGGCGGTCGTCGAGGACGTGAAAAAGCACCCCGAGGCGGCGACCAGCGGAATGGTGCTGCGGAGGCGGCTGCAGCTGATGATGTACAACAACATGTACAGAATCATGTTCGACCGGCGATTCGAGAGCGAGGAGGATCCCCTGTTCGTGAAGCTCAAGGCGCTGAATGGGGAGAGGAGCCGATTGGCGCAGAGCTTCGATTACAACTACGGCGATTTTATCCCGATCTTAAGGCCGTTTTTGAGAGGGTATTTGAAGATCTGCAAGGAAGTGAAGGAGAAGAGGATTCAGCTGTTTAAGGACTATTTCGTGGACGAGAGGAAGAAACTTTCGAGCACAAAGCCTACAACAAACGAAGGGTTGAAATGCGCCATCGATCACATCCTCGACGCGCAGCAGAAAGGAGAAATCAACGAGGACAACGTTCTCTACATCGTCGAGAACATCAACGTTGCTGCTATTGAAACCACGTTGTGGTCGATCGAGTGGGGAATTGCCGAGCTAGTGAACCACCCCGAAATCCAGAAGAAGTTGAGGAATGAACTCGACACAGTCCTCGGCCGCGGAGTTCAGATCACAGAGCCCGACGTTCCTAAACTTCCCTACCTGCAAGCCGTGGTCAAGGAGACTCTCCGACTTCGCATGGCAATCCCGCTCCTTGTCCCCCACATGAACCTCCAGGATGCCAAGCTCGGGGGGTTTGATATTCCGGCGGAGAGCAAGATATTGGTGAATGCTTGGTGGTTGGCAAACAACCCTGCCCTGTGGAAGAAGCCAGAAGAGTTTAGGCCCGAGAGGTTTTTGGAGGAGGAGTCGAAGGTGGAGGCTAACGGGAACGACTTCAGGTATCTCCCGTTTGGTGTTGGGAGGAGAAGTTGTCCTGGGATTATTTTGGCACTGCCAATCCTGGGCATTACAATTGGACGTTTAGTCCAGAACTTCGAGCTTCTGCCTCCGCCAGGACAGTCCAAGCTCGACACCTCGGAGAAAGGTGGACAATTCAGCCTGCACATCCTGAAGCACTCCACCATTGTGATGAAGCCGAGGGCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009808 GO:0009987 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0016710 GO:0019748 GO:0044237 GO:0044550 GO:0055114 GO:0071704 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko00130 ko00360 ko00940 ko00941 ko00945 ko01100 ko01110 ko01220 map00130 map00360 map00940 map00941 map00945 map01100 map01110 map01220

Pfam Domains

Protein Families

p450

Protein Analysis

505

Amino Acids

57.71

Weight (kDa)

9.12

Isoelectric Point (pI)

46.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	34 - 496	2.6e-121	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007364)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30490
fragaria_vesca	FvH4_3g40570
malus_domestica	MD00G1221400.v1.1 MD03G1050900.v1.1 MD03G1051000.v1.1 MD03G1051100.v1.1 MD03G1051300.v1.1 MD11G1052900.v1.1
prunus_persica	Prupe.6G040400_v2.0.a1
pyrus_communis	pycom03g04020 pycom03g04030 pycom03g04050 pycom03g04060
rosa_chinensis	RchiOBHm_Chr5g0073351
rosa_laevigata	RLG00000036379
rosa_multiflora	Rmu_sc0001997.1_g000001 Rmu_sc0005684.1_g000008 Rmu_sc0006213.1_g000002
rosa_roxburghii	Rroxscaffold_1G00007890
rosa_rugosa	Rorug05G0422900
rosa_samantha	Rh5AG479500 Rh5BG500700 Rh5CG523800 Rh5DG512500
rosa_wichuraiana	Rw5G044580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1077
AccB7I	CCANNNNNTGG	2 cut(s)	349, 936
AccBSI	CCGCTC	1 cut(s)	1117
AccI	GTMKAC	1 cut(s)	363
AccII	CGCG	3 cut(s)	81, 854, 1026
AclI	AACGTT	2 cut(s)	885, 912
AclWI	GGATC	2 cut(s)	593, 606
AcoI	YGGCCR	3 cut(s)	183, 258, 1021
AcsI	RAATTY	3 cut(s)	89, 191, 290
AcuI	CTGAAG	2 cut(s)	1288, 1499
AdeI	CACNNNGTG	1 cut(s)	936
AfaI	GTAC	4 cut(s)	120, 437, 548, 560
AflII	CTTAAG	1 cut(s)	691
AflIII	ACRYGT	1 cut(s)	555
AgeI	ACCGGT	1 cut(s)	332
AgsI	TTSAA	4 cut(s)	94, 718, 826, 926
AhdI	GACNNNNNGTC	1 cut(s)	1391
AjiI	CACGTC	1 cut(s)	481
AjnI	CCWGG	8 cut(s)	15, 141, 279, 342, 1140, 1342, 1368, 1420
AleI	CACNNNNGTG	1 cut(s)	1493
AloI	GAACNNNNNNTCC	4 cut(s)	338, 370, 590, 622
Alw21I	GWGCWC	2 cut(s)	375, 800
Alw26I	GTCTC	3 cut(s)	41, 247, 1082
AlwI	GGATC	2 cut(s)	593, 606
Ama87I	CYCGRG	3 cut(s)	494, 1154, 1253
AoxI	GGCC	6 cut(s)	183, 258, 340, 695, 1021, 1250
ApeKI	GCWGC	6 cut(s)	223, 520, 532, 535, 856, 917
ApoI	RAATTY	3 cut(s)	89, 191, 290
ArsI	GACNNNNNNTTYG	2 cut(s)	566, 598
AsiGI	ACCGGT	1 cut(s)	332
Asp700I	GAANNNNTTC	1 cut(s)	1301
AspLEI	GCGC	5 cut(s)	228, 625, 652, 833, 856
AspS9I	GGNCC	5 cut(s)	4, 107, 268, 303, 1251
AsuC2I	CCSGG	1 cut(s)	105
AsuHPI	GGTGA	7 cut(s)	161, 166, 322, 347, 349, 406, 1204
AsuII	TTCGAA	1 cut(s)	71
AvaI	CYCGRG	3 cut(s)	494, 1154, 1253
AvaII	GGWCC	4 cut(s)	4, 107, 268, 303
BalI	TGGCCA	2 cut(s)	185, 260
BamHI	GGATCC	1 cut(s)	598
BanII	GRGCYC	1 cut(s)	1047
Bbv12I	GWGCWC	2 cut(s)	375, 800
BbvI	GCAGC	6 cut(s)	235, 507, 519, 547, 868, 904
BccI	CCATC	3 cut(s)	68, 441, 842
BceAI	ACGGC	5 cut(s)	32, 382, 682, 688, 1061
BcgI	CGANNNNNNTGC	2 cut(s)	217, 251
BciT130I	CCWGG	8 cut(s)	17, 143, 281, 344, 1142, 1344, 1370, 1422
BcnI	CCSGG	1 cut(s)	105
BcoDI	GTCTC	3 cut(s)	41, 247, 1082
BfaI	CTAG	1 cut(s)	965
BfmI	CTRYAG	1 cut(s)	533
BfoI	RGCGCY	1 cut(s)	626
BfrI	CTTAAG	1 cut(s)	691
BfuAI	ACCTGC	1 cut(s)	1077
BglII	AGATCT	1 cut(s)	720
Bme1390I	CCNGG	9 cut(s)	17, 105, 143, 281, 344, 1142, 1344, 1370, 1422
Bme18I	GGWCC	4 cut(s)	4, 107, 268, 303
BmeRI	GACNNNNNGTC	1 cut(s)	1391
BmeT110I	CYCGRG	3 cut(s)	494, 1154, 1253
BmgBI	CACGTC	1 cut(s)	481
BmgT120I	GGNCC	5 cut(s)	4, 107, 268, 303, 1251
BmiI	GGNNCC	6 cut(s)	108, 109, 140, 305, 600, 641
BmrFI	CCNGG	9 cut(s)	17, 105, 143, 281, 344, 1142, 1344, 1370, 1422
BmsI	GCATC	1 cut(s)	1135
BpmI	CTGGAG	2 cut(s)	125, 1124
Bpu14I	TTCGAA	1 cut(s)	71
BpuEI	CTTGAG	1 cut(s)	602
BpuMI	CCSGG	1 cut(s)	105
Bsa29I	ATCGAT	1 cut(s)	837
BsaBI	GATNNNNATC	1 cut(s)	451
BsaI	GGTCTC	1 cut(s)	41
BsaWI	WCCGGW	1 cut(s)	332
BsaXI	ACNNNNNCTCC	6 cut(s)	1259, 1289, 1321, 1324, 1351, 1354
Bse118I	RCCGGY	2 cut(s)	332, 576
Bse1I	ACTGG	2 cut(s)	140, 380
Bse8I	GATNNNNATC	1 cut(s)	451
BseBI	CCWGG	8 cut(s)	17, 143, 281, 344, 1142, 1344, 1370, 1422
BseCI	ATCGAT	1 cut(s)	837
BseGI	GGATG	4 cut(s)	452, 843, 1150, 1473
BseJI	GATNNNNATC	1 cut(s)	451
BseNI	ACTGG	2 cut(s)	140, 380
BseRI	GAGGAG	7 cut(s)	200, 235, 608, 652, 1283, 1286, 1345
BseX3I	CGGCCG	1 cut(s)	1021
BseXI	GCAGC	6 cut(s)	235, 507, 519, 547, 868, 904
BsgI	GTGCAG	1 cut(s)	1454
Bsh1236I	CGCG	3 cut(s)	81, 854, 1026
Bsh1285I	CGRYCG	4 cut(s)	471, 577, 945, 1024
BshFI	GGCC	6 cut(s)	185, 260, 342, 697, 1023, 1252
BshTI	ACCGGT	1 cut(s)	332
BshVI	ATCGAT	1 cut(s)	837
BsiEI	CGRYCG	4 cut(s)	471, 577, 945, 1024
BsiHKAI	GWGCWC	2 cut(s)	375, 800
BsiHKCI	CYCGRG	3 cut(s)	494, 1154, 1253
BsiSI	CCGG	5 cut(s)	104, 251, 333, 577, 1172
BslFI	GGGAC	3 cut(s)	93, 389, 1109
BsmAI	GTCTC	3 cut(s)	41, 247, 1082
BsmBI	CGTCTC	1 cut(s)	247
BsmFI	GGGAC	3 cut(s)	93, 389, 1109
BsmI	GAATGC	1 cut(s)	1201
BsnI	GGCC	6 cut(s)	185, 260, 342, 697, 1023, 1252
Bso31I	GGTCTC	1 cut(s)	41
BsoBI	CYCGRG	3 cut(s)	494, 1154, 1253
Bsp119I	TTCGAA	1 cut(s)	71
Bsp1286I	GDGCHC	3 cut(s)	375, 800, 1047
Bsp1407I	TGTACA	2 cut(s)	546, 558
Bsp143I	GATC	6 cut(s)	598, 687, 720, 838, 942, 1035
BspANI	GGCC	6 cut(s)	185, 260, 342, 697, 1023, 1252
BspDI	ATCGAT	1 cut(s)	837
BspFNI	CGCG	3 cut(s)	81, 854, 1026
BspHI	TCATGA	1 cut(s)	396
BspLI	GGNNCC	6 cut(s)	108, 109, 140, 305, 600, 641
BspMAI	CTGCAG	1 cut(s)	537
BspMI	ACCTGC	1 cut(s)	1077
BspPI	GGATC	2 cut(s)	593, 606
BspT104I	TTCGAA	1 cut(s)	71
BspTI	CTTAAG	1 cut(s)	691
BspTNI	GGTCTC	1 cut(s)	41
BsrBI	CCGCTC	1 cut(s)	1117
BsrFI	RCCGGY	2 cut(s)	332, 576
BsrGI	TGTACA	2 cut(s)	546, 558
BsrI	ACTGG	2 cut(s)	140, 380
BssAI	RCCGGY	2 cut(s)	332, 576
BssMI	GATC	6 cut(s)	598, 687, 720, 838, 942, 1035
BssT1I	CCWWGG	1 cut(s)	261
Bst2UI	CCWGG	8 cut(s)	17, 143, 281, 344, 1142, 1344, 1370, 1422
Bst4CI	ACNGT	4 cut(s)	361, 403, 1015, 1428
Bst6I	CTCTTC	3 cut(s)	44, 737, 1236
BstAFI	CTTAAG	1 cut(s)	691
BstAUI	TGTACA	2 cut(s)	546, 558
BstBI	TTCGAA	1 cut(s)	71
BstC8I	GCNNGC	4 cut(s)	258, 371, 1074, 1469
BstDSI	CCRYGG	3 cut(s)	79, 1024, 1077
BstENI	CCTNNNNNAGG	1 cut(s)	1419
BstF5I	GGATG	4 cut(s)	452, 843, 1150, 1473
BstFNI	CGCG	3 cut(s)	81, 854, 1026
BstH2I	RGCGCY	1 cut(s)	626
BstHHI	GCGC	5 cut(s)	228, 625, 652, 833, 856
BstKTI	GATC	6 cut(s)	601, 690, 723, 841, 945, 1038
BstMAI	GTCTC	3 cut(s)	41, 247, 1082
BstMBI	GATC	6 cut(s)	598, 687, 720, 838, 942, 1035
BstMCI	CGRYCG	4 cut(s)	471, 577, 945, 1024
BstMWI	GCNNNNNNNGC	5 cut(s)	385, 526, 529, 535, 622
BstNI	CCWGG	8 cut(s)	17, 143, 281, 344, 1142, 1344, 1370, 1422
BstNSI	RCATGY	1 cut(s)	559
BstSCI	CCNGG	9 cut(s)	15, 103, 141, 279, 342, 1140, 1342, 1368, 1420
BstSFI	CTRYAG	1 cut(s)	533
BstUI	CGCG	3 cut(s)	81, 854, 1026
BstV1I	GCAGC	6 cut(s)	235, 507, 519, 547, 868, 904
BstX2I	RGATCY	2 cut(s)	598, 720
BstXI	CCANNNNNNTGG	1 cut(s)	514
BstYI	RGATCY	2 cut(s)	598, 720
BstZI	CGGCCG	1 cut(s)	1021
Bsu15I	ATCGAT	1 cut(s)	837
BsuRI	GGCC	6 cut(s)	185, 260, 342, 697, 1023, 1252
BsuTUI	ATCGAT	1 cut(s)	837
BtgI	CCRYGG	3 cut(s)	79, 1024, 1077
BtgZI	GCGATG	1 cut(s)	46
BtrI	CACGTC	1 cut(s)	481
BtsCI	GGATG	4 cut(s)	452, 843, 1150, 1473
BtsI	GCAGTG	1 cut(s)	1358
BtsIMutI	CAGTG	2 cut(s)	373, 1358
BveI	ACCTGC	1 cut(s)	1077
Cac8I	GCNNGC	4 cut(s)	258, 371, 1074, 1469
CciI	TCATGA	1 cut(s)	396
CfoI	GCGC	5 cut(s)	228, 625, 652, 833, 856
Cfr10I	RCCGGY	2 cut(s)	332, 576
Cfr13I	GGNCC	5 cut(s)	4, 107, 268, 303, 1251
Cfr42I	CCGCGG	2 cut(s)	82, 1027
ClaI	ATCGAT	1 cut(s)	837
CseI	GACGC	1 cut(s)	860
Csp6I	GTAC	4 cut(s)	119, 436, 547, 559
CspAI	ACCGGT	1 cut(s)	332
CviAII	CATG	8 cut(s)	181, 217, 349, 397, 556, 568, 1105, 1132
CviQI	GTAC	4 cut(s)	119, 436, 547, 559
DpnI	GATC	6 cut(s)	600, 689, 722, 840, 944, 1037
DpnII	GATC	6 cut(s)	598, 687, 720, 838, 942, 1035
DraIII	CACNNNGTG	1 cut(s)	936
DriI	GACNNNNNGTC	1 cut(s)	1391
EaeI	YGGCCR	3 cut(s)	183, 258, 1021
EagI	CGGCCG	1 cut(s)	1021
Eam1104I	CTCTTC	3 cut(s)	44, 737, 1236
Eam1105I	GACNNNNNGTC	1 cut(s)	1391
EarI	CTCTTC	3 cut(s)	44, 737, 1236
EciI	GGCGGA	3 cut(s)	394, 1190, 1407
EclXI	CGGCCG	1 cut(s)	1021
Eco130I	CCWWGG	1 cut(s)	261
Eco24I	GRGCYC	1 cut(s)	1047
Eco31I	GGTCTC	1 cut(s)	41
Eco47I	GGWCC	4 cut(s)	4, 107, 268, 303
Eco52I	CGGCCG	1 cut(s)	1021
Eco57I	CTGAAG	2 cut(s)	1288, 1499
Eco88I	CYCGRG	3 cut(s)	494, 1154, 1253
EcoNI	CCTNNNNNAGG	1 cut(s)	1419
EcoO109I	RGGNCCY	3 cut(s)	107, 268, 303
EcoRI	GAATTC	1 cut(s)	290
EcoRII	CCWGG	8 cut(s)	15, 141, 279, 342, 1140, 1342, 1368, 1420
EcoT14I	CCWWGG	1 cut(s)	261
EcoT38I	GRGCYC	1 cut(s)	1047
ErhI	CCWWGG	1 cut(s)	261
Esp3I	CGTCTC	1 cut(s)	247
FaeI	CATG	8 cut(s)	184, 220, 352, 400, 559, 571, 1108, 1135
FaiI	YATR	9 cut(s)	113, 182, 218, 350, 398, 557, 569, 1106, 1133
FaqI	GGGAC	3 cut(s)	93, 389, 1109
FatI	CATG	8 cut(s)	180, 216, 348, 396, 555, 567, 1104, 1131
FauI	CCCGC	2 cut(s)	108, 1122
FblI	GTMKAC	1 cut(s)	363
FokI	GGATG	4 cut(s)	459, 830, 1157, 1460
FriOI	GRGCYC	1 cut(s)	1047
FspBI	CTAG	1 cut(s)	965
GlaI	GCGC	5 cut(s)	227, 624, 651, 832, 855
GsuI	CTGGAG	2 cut(s)	125, 1124
HaeII	RGCGCY	1 cut(s)	626
HaeIII	GGCC	6 cut(s)	185, 260, 342, 697, 1023, 1252
HapII	CCGG	5 cut(s)	104, 251, 333, 577, 1172
HgaI	GACGC	1 cut(s)	860
HhaI	GCGC	5 cut(s)	228, 625, 652, 833, 856
Hin1II	CATG	8 cut(s)	184, 220, 352, 400, 559, 571, 1108, 1135
Hin6I	GCGC	5 cut(s)	226, 623, 650, 831, 854
HinP1I	GCGC	5 cut(s)	226, 623, 650, 831, 854
HinfI	GANTC	7 cut(s)	285, 452, 564, 582, 748, 1090, 1274
HpaII	CCGG	5 cut(s)	104, 251, 333, 577, 1172
HphI	GGTGA	7 cut(s)	161, 166, 322, 347, 349, 406, 1204
Hpy166II	GTNNAC	5 cut(s)	357, 364, 775, 970, 1457
Hpy188I	TCNGA	5 cut(s)	131, 457, 1035, 1097, 1447
Hpy188III	TCNNGA	8 cut(s)	397, 586, 610, 685, 901, 985, 1396, 1477
Hpy8I	GTNNAC	5 cut(s)	357, 364, 775, 970, 1457
Hpy99I	CGWCG	9 cut(s)	47, 59, 239, 242, 317, 476, 854, 902, 1052
HpyAV	CCTTC	6 cut(s)	38, 332, 418, 730, 812, 1273
HpyCH4III	ACNGT	4 cut(s)	361, 403, 1015, 1428
HpyCH4IV	ACGT	7 cut(s)	312, 480, 885, 912, 932, 1050, 1387
HpyCH4V	TGCA	4 cut(s)	535, 726, 1072, 1471
HpyF10VI	GCNNNNNNNGC	5 cut(s)	385, 526, 529, 535, 622
HpySE526I	ACGT	7 cut(s)	312, 480, 885, 912, 932, 1050, 1387
Hsp92II	CATG	8 cut(s)	184, 220, 352, 400, 559, 571, 1108, 1135
HspAI	GCGC	5 cut(s)	226, 623, 650, 831, 854
KflI	GGGWCCC	1 cut(s)	107
KspI	CCGCGG	2 cut(s)	82, 1027
Kzo9I	GATC	6 cut(s)	598, 687, 720, 838, 942, 1035
LmnI	GCTCC	5 cut(s)	102, 144, 253, 639, 1122
Lsp1109I	GCAGC	6 cut(s)	235, 507, 519, 547, 868, 904
LweI	GCATC	1 cut(s)	1135
MaeI	CTAG	1 cut(s)	965
MaeII	ACGT	7 cut(s)	312, 480, 885, 912, 932, 1050, 1387
MaeIII	GTNAC	1 cut(s)	149
MalI	GATC	6 cut(s)	600, 689, 722, 840, 944, 1037
MbiI	CCGCTC	1 cut(s)	1117
MboI	GATC	6 cut(s)	598, 687, 720, 838, 942, 1035
MboII	GAAGA	8 cut(s)	31, 403, 730, 754, 796, 1000, 1243, 1253
MfeI	CAATTG	1 cut(s)	1380
MflI	RGATCY	2 cut(s)	598, 720
MhlI	GDGCHC	3 cut(s)	375, 800, 1047
MlsI	TGGCCA	2 cut(s)	185, 260
MluCI	AATT	6 cut(s)	89, 191, 290, 954, 1380, 1460
MluNI	TGGCCA	2 cut(s)	185, 260
MlyI	GAGTC	3 cut(s)	294, 1084, 1283
MmeI	TCCRAC	1 cut(s)	1120
Mox20I	TGGCCA	2 cut(s)	185, 260
MroXI	GAANNNNTTC	1 cut(s)	1301
MscI	TGGCCA	2 cut(s)	185, 260
MseI	TTAA	2 cut(s)	692, 759
MslI	CAYNNNNRTG	3 cut(s)	179, 1493, 1496
Msp20I	TGGCCA	2 cut(s)	185, 260
MspA1I	CMGCKG	5 cut(s)	81, 510, 538, 754, 1026
MspCI	CTTAAG	1 cut(s)	691
MspI	CCGG	5 cut(s)	104, 251, 333, 577, 1172
MspR9I	CCNGG	9 cut(s)	17, 105, 143, 281, 344, 1142, 1344, 1370, 1422
MunI	CAATTG	1 cut(s)	1380
Mva1269I	GAATGC	1 cut(s)	1201
MvaI	CCWGG	8 cut(s)	17, 143, 281, 344, 1142, 1344, 1370, 1422
MvnI	CGCG	3 cut(s)	81, 854, 1026
MwoI	GCNNNNNNNGC	5 cut(s)	385, 526, 529, 535, 622
NciI	CCSGG	1 cut(s)	105
NdeII	GATC	6 cut(s)	598, 687, 720, 838, 942, 1035
NlaIII	CATG	8 cut(s)	184, 220, 352, 400, 559, 571, 1108, 1135
NlaIV	GGNNCC	6 cut(s)	108, 109, 140, 305, 600, 641
NmeAIII	GCCGAG	2 cut(s)	985, 999
NmuCI	GTSAC	1 cut(s)	149
NspI	RCATGY	1 cut(s)	559
NspV	TTCGAA	1 cut(s)	71
OliI	CACNNNNGTG	1 cut(s)	1493
PagI	TCATGA	1 cut(s)	396
PasI	CCCWGGG	1 cut(s)	280
PciI	ACATGT	1 cut(s)	555
PcsI	WCGNNNNNNNCGW	4 cut(s)	51, 477, 882, 938
PctI	GAATGC	1 cut(s)	1201
PdmI	GAANNNNTTC	1 cut(s)	1301
PfeI	GAWTC	4 cut(s)	452, 564, 582, 748
PflFI	GACNNNGTC	1 cut(s)	1013
PflMI	CCANNNNNTGG	2 cut(s)	349, 936
PfoI	TCCNGGA	2 cut(s)	15, 1140
PinAI	ACCGGT	1 cut(s)	332
Ple19I	CGATCG	1 cut(s)	945
PleI	GAGTC	3 cut(s)	293, 1084, 1282
PpsI	GAGTC	3 cut(s)	293, 1084, 1282
PpuMI	RGGWCCY	3 cut(s)	107, 268, 303
PscI	ACATGT	1 cut(s)	555
Psp1406I	AACGTT	2 cut(s)	885, 912
Psp5II	RGGWCCY	3 cut(s)	107, 268, 303
Psp6I	CCWGG	8 cut(s)	15, 141, 279, 342, 1140, 1342, 1368, 1420
PspGI	CCWGG	8 cut(s)	15, 141, 279, 342, 1140, 1342, 1368, 1420
PspN4I	GGNNCC	6 cut(s)	108, 109, 140, 305, 600, 641
PspPI	GGNCC	5 cut(s)	4, 107, 268, 303, 1251
PspPPI	RGGWCCY	3 cut(s)	107, 268, 303
PstI	CTGCAG	1 cut(s)	537
PsuI	RGATCY	2 cut(s)	598, 720
PsyI	GACNNNGTC	1 cut(s)	1013
PvuI	CGATCG	1 cut(s)	945
PvuII	CAGCTG	2 cut(s)	538, 754
RsaI	GTAC	4 cut(s)	120, 437, 548, 560
RsaNI	GTAC	4 cut(s)	119, 436, 547, 559
RseI	CAYNNNNRTG	3 cut(s)	179, 1493, 1496
SacII	CCGCGG	2 cut(s)	82, 1027
SaqAI	TTAA	2 cut(s)	692, 759
Sau3AI	GATC	6 cut(s)	598, 687, 720, 838, 942, 1035
Sau96I	GGNCC	5 cut(s)	4, 107, 268, 303, 1251
SchI	GAGTC	3 cut(s)	294, 1084, 1283
ScrFI	CCNGG	9 cut(s)	17, 105, 143, 281, 344, 1142, 1344, 1370, 1422
SduI	GDGCHC	3 cut(s)	375, 800, 1047
SfaNI	GCATC	1 cut(s)	1135
SfcI	CTRYAG	1 cut(s)	533
Sfr303I	CCGCGG	2 cut(s)	82, 1027
SfuI	TTCGAA	1 cut(s)	71
SgrAI	CRCCGGYG	1 cut(s)	332
SgrBI	CCGCGG	2 cut(s)	82, 1027
SinI	GGWCC	4 cut(s)	4, 107, 268, 303
SmiMI	CAYNNNNRTG	3 cut(s)	179, 1493, 1496
SmlI	CTYRAG	2 cut(s)	617, 691
SmoI	CTYRAG	2 cut(s)	617, 691
Sse9I	AATT	6 cut(s)	89, 191, 290, 954, 1380, 1460
SspMI	CTAG	1 cut(s)	965
StyD4I	CCNGG	9 cut(s)	15, 103, 141, 279, 342, 1140, 1342, 1368, 1420
StyI	CCWWGG	1 cut(s)	261
TaaI	ACNGT	4 cut(s)	361, 403, 1015, 1428
TaiI	ACGT	7 cut(s)	315, 483, 888, 915, 935, 1053, 1390
TasI	AATT	6 cut(s)	89, 191, 290, 954, 1380, 1460
TatI	WGTACW	2 cut(s)	546, 558
TauI	GCSGC	7 cut(s)	84, 391, 464, 467, 503, 532, 1026
TfiI	GAWTC	4 cut(s)	452, 564, 582, 748
Tru1I	TTAA	2 cut(s)	692, 759
Tru9I	TTAA	2 cut(s)	692, 759
TscAI	CASTG	2 cut(s)	380, 1365
TseFI	GTSAC	1 cut(s)	149
TseI	GCWGC	6 cut(s)	223, 520, 532, 535, 856, 917
Tsp45I	GTSAC	1 cut(s)	149
TspDTI	ATGAA	3 cut(s)	1017, 1148, 1514
TspGWI	ACGGA	1 cut(s)	459
TspRI	CASTG	2 cut(s)	380, 1365
Tth111I	GACNNNGTC	1 cut(s)	1013
Van91I	CCANNNNNTGG	2 cut(s)	349, 936
Vha464I	CTTAAG	1 cut(s)	691
VpaK11BI	GGWCC	4 cut(s)	4, 107, 268, 303
XagI	CCTNNNNNAGG	1 cut(s)	1419
XapI	RAATTY	3 cut(s)	89, 191, 290
XceI	RCATGY	1 cut(s)	559
XmiI	GTMKAC	1 cut(s)	363
XmnI	GAANNNNTTC	1 cut(s)	1301
XspI	CTAG	1 cut(s)	965

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.