Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0007364

Physical Location & Seq

Genomic Coordinates Reverse (-)

34210255 .. 34214051

Gene Structure 3797 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g40570.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

ATGGATCTCCTTCTCTTGGAGAAGACCCTAATAGGTCTCTTCATCGCTATAGTCGTCGCAATCATCGTCTCCAAGCTCCGCGGCAAGAAGTTCAAGCTCCCTCCCGGTCCTATCCCCGTCCCCGTCTTCGGCAACTGGCTCCAAGTCGGCGATGACCTCAACCACCGCAACCTTACTGACATGGCTAAAAAATTCGGCGACGTGTTCATGCTCCGCATGGGGCAGCGCAACCTCGTCGTGGTCTCGTCACCTGACCTGGCCAAGGAGGTCCTCCACACTCAGGGCGTCGAGTTCGGCTCCCGAACGAGGAACGTCGTGTTCGACATCTTCACCGGGAAAGGACAGGACATGGTGTTCACCGTGTACGGTGAGCACTGGAGGAAAATGAGGAGGATAATGACGGTTCCTTTCTTCACCAACAAGGTGGTGCAGCAGTACCGCCACGGCTGGGAGGCGGAGGCGGCGGCGGTGGTGGAGGACGTGAAGAAACACCCCGAGGCCGCCACCAGCGGGATGGTGCTACGTAGGAGGCTGCAGCTGATGATGTACAACAACATGTACAGGATCATGTTCGACAGGAGATTTGAAAGCGAGGAGGACCCTCTGTTCGTGAAACTTAAGGGTTTGAATGGAGAGAGGAGCCGACTTGCGCAGAGCTTTGAGTATAATTACGGTGACTTTATTCCCGTGCTCCGGCCGTTCCTCCGAGGGTACCTGAAGATCTGTAAGGAGGTGAAGGAGAAGAGGATTCAGCTCTTCAAGGACTATTTCGTCGATGAGAGAAAGAAACTTGCAAGCACACAGGTCACAACTAATGAAGGATTGAAGTGTGCCATTGACCACATCTTGGACGCTCAACAGAAAGGAGAGATCAACGAGGACAATGTCCTTTACATCGTCGAGAACATTAACGTCGCCGCCATTGAAACTACACTATGGTCAATCGAGTGGGGAATAGCCGAGCTTGTGAACCACCCCGAAATCCAGAAGAAGCTGAGGGATGAGCTCGACACTGTCCTAGGCCATGGAGTTCAAGTCACAGAACCCGAACTTCACAAGCTACCGTACCTTCAAGCCGTGGTGAAGGAAACCCTAAGGCTTCGCATGGCGATCCCCCTCCTCGTCCCACACATGAACCTCCACGATGCCAAGCTCGGAGGGTTCGACATTCCGGCGGAGAGCAAGATCTTGGTGAATGCTTGGTGGCTAGCGAACAACCCTGCACACTGGAAGAAACCAGAGGAGTTTAGGCCTGAGAGGTTTTTGGAAGAGGAGTCAAAGGTTGAGGCCAATGGCAATGACTTCAGGTACCTTCCGTTTGGTGTCGGCCGGCGAAGTTGTCCCGGGATTATTTTGGCACTGCCAATCCTTGGGGTTACTTTGGGACGTTTGGTCCAGAACTTTGAGATGTTACCTCCTCCAGGACAGACTCAGCTTGACACTACGGAGAAAGGTGGACAGTTTAGCCTGCATATCTTGAAGCACTCTACCATAGTCATGAAGCCAAGGGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009808 GO:0009987 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0016710 GO:0019748 GO:0044237 GO:0044550 GO:0055114 GO:0071704 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko00130 ko00360 ko00940 ko00941 ko00945 ko01100 ko01110 ko01220 map00130 map00360 map00940 map00941 map00945 map01100 map01110 map01220

Pfam Domains

Protein Families

p450

Protein Analysis

505

Amino Acids

57.79

Weight (kDa)

9.02

Isoelectric Point (pI)

41.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	34 - 496	6.8e-120	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007364)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G30490
fragaria_vesca	FvH4_3g40570
malus_domestica	MD00G1221400.v1.1 MD03G1050900.v1.1 MD03G1051000.v1.1 MD03G1051100.v1.1 MD03G1051300.v1.1 MD11G1052900.v1.1
prunus_persica	Prupe.6G040400_v2.0.a1
pyrus_communis	pycom03g04020 pycom03g04030 pycom03g04050 pycom03g04060
rosa_chinensis	RchiOBHm_Chr5g0073351
rosa_laevigata	RLG00000036379
rosa_multiflora	Rmu_sc0001997.1_g000001 Rmu_sc0005684.1_g000008 Rmu_sc0006213.1_g000002
rosa_roxburghii	Rroxscaffold_1G00007890
rosa_rugosa	Rorug05G0422900
rosa_samantha	Rh5AG479500 Rh5BG500700 Rh5CG523800 Rh5DG512500
rosa_wichuraiana	Rw5G044580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	770
Acc16I	TGCGCA	1 cut(s)	651
Acc65I	GGTACC	2 cut(s)	711, 1308
AccB1I	GGYRCC	2 cut(s)	711, 1308
AccB7I	CCANNNNNTGG	2 cut(s)	847, 1370
AccII	CGCG	1 cut(s)	81
AclWI	GGATC	3 cut(s)	12, 572, 1105
AcoI	YGGCCR	3 cut(s)	258, 695, 1327
AcsI	RAATTY	1 cut(s)	191
AcuI	CTGAAG	2 cut(s)	737, 1288
AcyI	GRCGYC	1 cut(s)	285
AfaI	GTAC	7 cut(s)	365, 437, 548, 560, 713, 1067, 1310
AflII	CTTAAG	1 cut(s)	617
AflIII	ACRYGT	2 cut(s)	201, 555
AgsI	TTSAA	9 cut(s)	94, 587, 628, 760, 826, 926, 1034, 1073, 1480
AhdI	GACNNNNNGTC	1 cut(s)	1391
AjiI	CACGTC	2 cut(s)	202, 481
AjnI	CCWGG	2 cut(s)	255, 1420
AloI	GAACNNNNNNTCC	4 cut(s)	338, 370, 590, 622
Alw21I	GWGCWC	3 cut(s)	375, 693, 1008
Alw26I	GTCTC	3 cut(s)	41, 73, 247
AlwI	GGATC	3 cut(s)	12, 572, 1105
Ama87I	CYCGRG	2 cut(s)	494, 1343
AoxI	GGCC	7 cut(s)	258, 498, 695, 1021, 1250, 1287, 1327
ApeKI	GCWGC	4 cut(s)	223, 430, 532, 535
ApoI	RAATTY	1 cut(s)	191
ArsI	GACNNNNNNTTYG	4 cut(s)	566, 590, 598, 622
Asp718I	GGTACC	2 cut(s)	711, 1308
AspA2I	CCTAGG	1 cut(s)	1018
AspLEI	GCGC	2 cut(s)	228, 652
AspS9I	GGNCC	4 cut(s)	107, 268, 598, 1393
AsuC2I	CCSGG	4 cut(s)	105, 334, 1344, 1345
AsuHPI	GGTGA	9 cut(s)	240, 322, 349, 380, 406, 686, 745, 1093, 1204
AsuNHI	GCTAGC	1 cut(s)	1207
AvaI	CYCGRG	2 cut(s)	494, 1343
AvaII	GGWCC	4 cut(s)	107, 268, 598, 1393
AvrII	CCTAGG	1 cut(s)	1018
AxyI	CCTNAGG	1 cut(s)	1094
BalI	TGGCCA	1 cut(s)	260
BanI	GGYRCC	2 cut(s)	711, 1308
BanII	GRGCYC	1 cut(s)	1008
BbsI	GAAGAC	2 cut(s)	29, 118
Bbv12I	GWGCWC	3 cut(s)	375, 693, 1008
BbvCI	CCTCAGC	1 cut(s)	995
BbvI	GCAGC	4 cut(s)	235, 442, 519, 547
BccI	CCATC	1 cut(s)	508
BceAI	ACGGC	3 cut(s)	460, 682, 1061
BcgI	CGANNNNNNTGC	2 cut(s)	217, 251
BciT130I	CCWGG	2 cut(s)	257, 1422
BcnI	CCSGG	4 cut(s)	105, 334, 1344, 1345
BcoDI	GTCTC	3 cut(s)	41, 73, 247
BfaI	CTAG	2 cut(s)	1019, 1208
BfmI	CTRYAG	2 cut(s)	48, 533
BfrI	CTTAAG	1 cut(s)	617
BglII	AGATCT	2 cut(s)	720, 1185
BisI	GCNGC	9 cut(s)	82, 224, 431, 462, 465, 501, 533, 536, 918
BlnI	CCTAGG	1 cut(s)	1018
BlsI	GCNGC	9 cut(s)	83, 225, 432, 463, 466, 502, 534, 537, 919
Bme1390I	CCNGG	6 cut(s)	105, 257, 334, 1344, 1345, 1422
Bme18I	GGWCC	4 cut(s)	107, 268, 598, 1393
BmeRI	GACNNNNNGTC	1 cut(s)	1391
BmeT110I	CYCGRG	2 cut(s)	494, 1343
BmgBI	CACGTC	2 cut(s)	202, 481
BmgT120I	GGNCC	4 cut(s)	107, 268, 598, 1393
BmiI	GGNNCC	7 cut(s)	140, 298, 405, 600, 641, 713, 1310
BmrFI	CCNGG	6 cut(s)	105, 257, 334, 1344, 1345, 1422
BmsI	GCATC	1 cut(s)	1135
BmtI	GCTAGC	1 cut(s)	1211
BpiI	GAAGAC	2 cut(s)	29, 118
BplI	GAGNNNNNCTC	2 cut(s)	281, 313
BpmI	CTGGAG	2 cut(s)	397, 1404
Bpu10I	CCTNAGC	1 cut(s)	995
BpuMI	CCSGG	4 cut(s)	105, 334, 1344, 1345
BsaAI	YACGTR	1 cut(s)	524
BsaHI	GRCGYC	1 cut(s)	285
BsaI	GGTCTC	2 cut(s)	41, 247
BsaXI	ACNNNNNCTCC	2 cut(s)	1020, 1050
Bse118I	RCCGGY	1 cut(s)	1329
Bse1I	ACTGG	3 cut(s)	140, 380, 1232
Bse21I	CCTNAGG	1 cut(s)	1094
Bse3DI	GCAATG	1 cut(s)	1303
BseBI	CCWGG	2 cut(s)	257, 1422
BseGI	GGATG	2 cut(s)	519, 1006
BseMI	GCAATG	1 cut(s)	1303
BseMII	CTCAG	4 cut(s)	293, 986, 1245, 1445
BseNI	ACTGG	3 cut(s)	140, 380, 1232
BseRI	GAGGAG	7 cut(s)	403, 608, 652, 1109, 1256, 1286, 1407
BseX3I	CGGCCG	2 cut(s)	695, 1327
BseXI	GCAGC	4 cut(s)	235, 442, 519, 547
BseYI	CCCAGC	1 cut(s)	447
BsgI	GTGCAG	2 cut(s)	449, 1206
Bsh1236I	CGCG	1 cut(s)	81
Bsh1285I	CGRYCG	2 cut(s)	698, 1330
BshFI	GGCC	7 cut(s)	260, 500, 697, 1023, 1252, 1289, 1329
BshNI	GGYRCC	2 cut(s)	711, 1308
BsiEI	CGRYCG	2 cut(s)	698, 1330
BsiHKAI	GWGCWC	3 cut(s)	375, 693, 1008
BsiHKCI	CYCGRG	2 cut(s)	494, 1343
BsiSI	CCGG	6 cut(s)	105, 333, 694, 1172, 1330, 1344
BslFI	GGGAC	4 cut(s)	104, 1109, 1326, 1398
BsmAI	GTCTC	3 cut(s)	41, 73, 247
BsmBI	CGTCTC	1 cut(s)	73
BsmFI	GGGAC	4 cut(s)	104, 1109, 1326, 1398
BsmI	GAATGC	1 cut(s)	1201
BsnI	GGCC	7 cut(s)	260, 500, 697, 1023, 1252, 1289, 1329
Bso31I	GGTCTC	2 cut(s)	41, 247
BsoBI	CYCGRG	2 cut(s)	494, 1343
Bsp1286I	GDGCHC	3 cut(s)	375, 693, 1008
Bsp1407I	TGTACA	2 cut(s)	546, 558
Bsp143I	GATC	6 cut(s)	4, 564, 720, 870, 1110, 1185
Bsp19I	CCATGG	1 cut(s)	1024
BspANI	GGCC	7 cut(s)	260, 500, 697, 1023, 1252, 1289, 1329
BspCNI	CTCAG	4 cut(s)	292, 987, 1246, 1444
BspFNI	CGCG	1 cut(s)	81
BspHI	TCATGA	1 cut(s)	1497
BspLI	GGNNCC	7 cut(s)	140, 298, 405, 600, 641, 713, 1310
BspMAI	CTGCAG	1 cut(s)	537
BspOI	GCTAGC	1 cut(s)	1211
BspPI	GGATC	3 cut(s)	12, 572, 1105
BspQI	GCTCTTC	1 cut(s)	761
BspT107I	GGYRCC	2 cut(s)	711, 1308
BspTI	CTTAAG	1 cut(s)	617
BspTNI	GGTCTC	2 cut(s)	41, 247
BsrDI	GCAATG	1 cut(s)	1303
BsrFI	RCCGGY	1 cut(s)	1329
BsrGI	TGTACA	2 cut(s)	546, 558
BsrI	ACTGG	3 cut(s)	140, 380, 1232
BssAI	RCCGGY	1 cut(s)	1329
BssMI	GATC	6 cut(s)	4, 564, 720, 870, 1110, 1185
BssNI	GRCGYC	1 cut(s)	285
BssT1I	CCWWGG	5 cut(s)	261, 1018, 1024, 1369, 1505
Bst2UI	CCWGG	2 cut(s)	257, 1422
Bst4CI	ACNGT	7 cut(s)	361, 368, 403, 674, 1015, 1065, 1461
Bst6I	CTCTTC	4 cut(s)	44, 737, 761, 1263
BstACI	GRCGYC	1 cut(s)	285
BstAFI	CTTAAG	1 cut(s)	617
BstAUI	TGTACA	2 cut(s)	546, 558
BstBAI	YACGTR	1 cut(s)	524
BstC8I	GCNNGC	4 cut(s)	796, 1209, 1331, 1469
BstDEI	CTNAG	5 cut(s)	279, 995, 1094, 1254, 1431
BstDSI	CCRYGG	4 cut(s)	79, 442, 1024, 1077
BstENI	CCTNNNNNAGG	2 cut(s)	260, 1419
BstF5I	GGATG	2 cut(s)	519, 1006
BstFNI	CGCG	1 cut(s)	81
BstHHI	GCGC	2 cut(s)	228, 652
BstKTI	GATC	6 cut(s)	7, 567, 723, 873, 1113, 1188
BstMAI	GTCTC	3 cut(s)	41, 73, 247
BstMBI	GATC	6 cut(s)	4, 564, 720, 870, 1110, 1185
BstMCI	CGRYCG	2 cut(s)	698, 1330
BstMWI	GCNNNNNNNGC	1 cut(s)	461
BstNI	CCWGG	2 cut(s)	257, 1422
BstNSI	RCATGY	1 cut(s)	559
BstSCI	CCNGG	6 cut(s)	103, 255, 332, 1342, 1343, 1420
BstSFI	CTRYAG	2 cut(s)	48, 533
BstSNI	TACGTA	1 cut(s)	524
BstUI	CGCG	1 cut(s)	81
BstV1I	GCAGC	4 cut(s)	235, 442, 519, 547
BstV2I	GAAGAC	2 cut(s)	29, 118
BstX2I	RGATCY	3 cut(s)	4, 720, 1185
BstXI	CCANNNNNNTGG	2 cut(s)	424, 514
BstYI	RGATCY	3 cut(s)	4, 720, 1185
BstZI	CGGCCG	2 cut(s)	695, 1327
Bsu36I	CCTNAGG	1 cut(s)	1094
BsuRI	GGCC	7 cut(s)	260, 500, 697, 1023, 1252, 1289, 1329
BtgI	CCRYGG	4 cut(s)	79, 442, 1024, 1077
BtgZI	GCGATG	2 cut(s)	28, 165
BtrI	CACGTC	2 cut(s)	202, 481
BtsCI	GGATG	2 cut(s)	519, 1006
BtsI	GCAGTG	1 cut(s)	1358
BtsIMutI	CAGTG	4 cut(s)	373, 1011, 1225, 1358
Cac8I	GCNNGC	4 cut(s)	796, 1209, 1331, 1469
CciI	TCATGA	1 cut(s)	1497
CfoI	GCGC	2 cut(s)	228, 652
Cfr10I	RCCGGY	1 cut(s)	1329
Cfr13I	GGNCC	4 cut(s)	107, 268, 598, 1393
Cfr42I	CCGCGG	1 cut(s)	82
Cfr9I	CCCGGG	1 cut(s)	1343
CseI	GACGC	2 cut(s)	274, 860
Csp6I	GTAC	7 cut(s)	364, 436, 547, 559, 712, 1066, 1309
CviQI	GTAC	7 cut(s)	364, 436, 547, 559, 712, 1066, 1309
DdeI	CTNAG	5 cut(s)	279, 995, 1094, 1254, 1431
DpnI	GATC	6 cut(s)	6, 566, 722, 872, 1112, 1187
DpnII	GATC	6 cut(s)	4, 564, 720, 870, 1110, 1185
DrdI	GACNNNNNNGTC	1 cut(s)	770
DriI	GACNNNNNGTC	1 cut(s)	1391
DseDI	GACNNNNNNGTC	1 cut(s)	770
EaeI	YGGCCR	3 cut(s)	258, 695, 1327
EagI	CGGCCG	2 cut(s)	695, 1327
Eam1104I	CTCTTC	4 cut(s)	44, 737, 761, 1263
Eam1105I	GACNNNNNGTC	1 cut(s)	1391
EarI	CTCTTC	4 cut(s)	44, 737, 761, 1263
EciI	GGCGGA	2 cut(s)	470, 1190
Ecl136II	GAGCTC	1 cut(s)	1006
EclXI	CGGCCG	2 cut(s)	695, 1327
Eco105I	TACGTA	1 cut(s)	524
Eco130I	CCWWGG	5 cut(s)	261, 1018, 1024, 1369, 1505
Eco147I	AGGCCT	1 cut(s)	1252
Eco24I	GRGCYC	1 cut(s)	1008
Eco31I	GGTCTC	2 cut(s)	41, 247
Eco47I	GGWCC	4 cut(s)	107, 268, 598, 1393
Eco52I	CGGCCG	2 cut(s)	695, 1327
Eco53kI	GAGCTC	1 cut(s)	1006
Eco57I	CTGAAG	2 cut(s)	737, 1288
Eco81I	CCTNAGG	1 cut(s)	1094
Eco88I	CYCGRG	2 cut(s)	494, 1343
EcoICRI	GAGCTC	1 cut(s)	1006
EcoNI	CCTNNNNNAGG	2 cut(s)	260, 1419
EcoO109I	RGGNCCY	2 cut(s)	268, 598
EcoRII	CCWGG	2 cut(s)	255, 1420
EcoT14I	CCWWGG	5 cut(s)	261, 1018, 1024, 1369, 1505
EcoT38I	GRGCYC	1 cut(s)	1008
ErhI	CCWWGG	5 cut(s)	261, 1018, 1024, 1369, 1505
Esp3I	CGTCTC	1 cut(s)	73
FaqI	GGGAC	4 cut(s)	104, 1109, 1326, 1398
FauI	CCCGC	1 cut(s)	503
Fnu4HI	GCNGC	9 cut(s)	82, 224, 431, 462, 465, 501, 533, 536, 918
FokI	GGATG	2 cut(s)	526, 1013
FriOI	GRGCYC	1 cut(s)	1008
Fsp4HI	GCNGC	9 cut(s)	82, 224, 431, 462, 465, 501, 533, 536, 918
FspBI	CTAG	2 cut(s)	1019, 1208
FspI	TGCGCA	1 cut(s)	651
GlaI	GCGC	2 cut(s)	227, 651
GluI	GCNGC	9 cut(s)	82, 224, 431, 462, 465, 501, 533, 536, 918
GsaI	CCCAGC	1 cut(s)	451
GsuI	CTGGAG	2 cut(s)	397, 1404
HaeIII	GGCC	7 cut(s)	260, 500, 697, 1023, 1252, 1289, 1329
HapII	CCGG	6 cut(s)	105, 333, 694, 1172, 1330, 1344
HgaI	GACGC	2 cut(s)	274, 860
HhaI	GCGC	2 cut(s)	228, 652
Hin1I	GRCGYC	1 cut(s)	285
Hin6I	GCGC	2 cut(s)	226, 650
HinP1I	GCGC	2 cut(s)	226, 650
HinfI	GANTC	3 cut(s)	748, 1274, 1429
HpaII	CCGG	6 cut(s)	105, 333, 694, 1172, 1330, 1344
HphI	GGTGA	9 cut(s)	240, 322, 349, 380, 406, 686, 745, 1093, 1204
Hpy166II	GTNNAC	4 cut(s)	357, 364, 970, 1457
Hpy188I	TCNGA	2 cut(s)	707, 1157
Hpy188III	TCNNGA	7 cut(s)	300, 610, 901, 985, 1396, 1477, 1498
Hpy8I	GTNNAC	4 cut(s)	357, 364, 970, 1457
Hpy99I	CGWCG	8 cut(s)	59, 203, 239, 290, 317, 776, 902, 917
HpyAV	CCTTC	6 cut(s)	20, 730, 812, 1078, 1079, 1322
HpyCH4III	ACNGT	7 cut(s)	361, 368, 403, 674, 1015, 1065, 1461
HpyCH4IV	ACGT	6 cut(s)	201, 312, 480, 523, 912, 1387
HpyCH4V	TGCA	5 cut(s)	430, 535, 794, 1223, 1471
HpyF10VI	GCNNNNNNNGC	1 cut(s)	461
HpyF3I	CTNAG	5 cut(s)	279, 995, 1094, 1254, 1431
HpySE526I	ACGT	6 cut(s)	201, 312, 480, 523, 912, 1387
Hsp92I	GRCGYC	1 cut(s)	285
HspAI	GCGC	2 cut(s)	226, 650
KpnI	GGTACC	2 cut(s)	715, 1312
KroI	GCCGGC	1 cut(s)	1329
KroNI	GCCGGC	1 cut(s)	1331
KspI	CCGCGG	1 cut(s)	82
Kzo9I	GATC	6 cut(s)	4, 564, 720, 870, 1110, 1185
LguI	GCTCTTC	1 cut(s)	761
LmnI	GCTCC	7 cut(s)	81, 102, 144, 216, 302, 639, 696
Lsp1109I	GCAGC	4 cut(s)	235, 442, 519, 547
LweI	GCATC	1 cut(s)	1135
MaeI	CTAG	2 cut(s)	1019, 1208
MaeII	ACGT	6 cut(s)	201, 312, 480, 523, 912, 1387
MaeIII	GTNAC	6 cut(s)	246, 674, 805, 1036, 1375, 1410
MalI	GATC	6 cut(s)	6, 566, 722, 872, 1112, 1187
MboI	GATC	6 cut(s)	4, 564, 720, 870, 1110, 1185
MflI	RGATCY	3 cut(s)	4, 720, 1185
MhlI	GDGCHC	3 cut(s)	375, 693, 1008
MlsI	TGGCCA	1 cut(s)	260
MluCI	AATT	2 cut(s)	191, 667
MluNI	TGGCCA	1 cut(s)	260
MlyI	GAGTC	2 cut(s)	1283, 1423
Mox20I	TGGCCA	1 cut(s)	260
MroNI	GCCGGC	1 cut(s)	1329
MscI	TGGCCA	1 cut(s)	260
MseI	TTAA	2 cut(s)	618, 909
MslI	CAYNNNNRTG	1 cut(s)	1496
Msp20I	TGGCCA	1 cut(s)	260
MspA1I	CMGCKG	3 cut(s)	81, 510, 538
MspCI	CTTAAG	1 cut(s)	617
MspI	CCGG	6 cut(s)	105, 333, 694, 1172, 1330, 1344
MspR9I	CCNGG	6 cut(s)	105, 257, 334, 1344, 1345, 1422
Mva1269I	GAATGC	1 cut(s)	1201
MvaI	CCWGG	2 cut(s)	257, 1422
MvnI	CGCG	1 cut(s)	81
MwoI	GCNNNNNNNGC	1 cut(s)	461
NaeI	GCCGGC	1 cut(s)	1331
NciI	CCSGG	4 cut(s)	105, 334, 1344, 1345
NcoI	CCATGG	1 cut(s)	1024
NdeII	GATC	6 cut(s)	4, 564, 720, 870, 1110, 1185
NgoMIV	GCCGGC	1 cut(s)	1329
NheI	GCTAGC	1 cut(s)	1207
NlaIV	GGNNCC	7 cut(s)	140, 298, 405, 600, 641, 713, 1310
NmeAIII	GCCGAG	1 cut(s)	985
NmuCI	GTSAC	4 cut(s)	246, 674, 805, 1036
NsbI	TGCGCA	1 cut(s)	651
NspI	RCATGY	1 cut(s)	559
PagI	TCATGA	1 cut(s)	1497
PceI	AGGCCT	1 cut(s)	1252
PciI	ACATGT	1 cut(s)	555
PciSI	GCTCTTC	1 cut(s)	761
PcsI	WCGNNNNNNNCGW	4 cut(s)	51, 63, 318, 1161
PctI	GAATGC	1 cut(s)	1201
PdiI	GCCGGC	1 cut(s)	1331
PfeI	GAWTC	1 cut(s)	748
PflFI	GACNNNGTC	2 cut(s)	884, 1013
PflMI	CCANNNNNTGG	2 cut(s)	847, 1370
PfoI	TCCNGGA	1 cut(s)	1420
PkrI	GCNGC	9 cut(s)	83, 225, 432, 463, 466, 502, 534, 537, 919
PleI	GAGTC	2 cut(s)	1282, 1423
PpsI	GAGTC	2 cut(s)	1282, 1423
Ppu21I	YACGTR	1 cut(s)	524
PpuMI	RGGWCCY	2 cut(s)	268, 598
PscI	ACATGT	1 cut(s)	555
Psp124BI	GAGCTC	1 cut(s)	1008
Psp5II	RGGWCCY	2 cut(s)	268, 598
Psp6I	CCWGG	2 cut(s)	255, 1420
PspFI	CCCAGC	1 cut(s)	447
PspGI	CCWGG	2 cut(s)	255, 1420
PspN4I	GGNNCC	7 cut(s)	140, 298, 405, 600, 641, 713, 1310
PspPI	GGNCC	4 cut(s)	107, 268, 598, 1393
PspPPI	RGGWCCY	2 cut(s)	268, 598
PstI	CTGCAG	1 cut(s)	537
PsuI	RGATCY	3 cut(s)	4, 720, 1185
PsyI	GACNNNGTC	2 cut(s)	884, 1013
PvuII	CAGCTG	1 cut(s)	538
RsaI	GTAC	7 cut(s)	365, 437, 548, 560, 713, 1067, 1310
RsaNI	GTAC	7 cut(s)	364, 436, 547, 559, 712, 1066, 1309
RseI	CAYNNNNRTG	1 cut(s)	1496
SacI	GAGCTC	1 cut(s)	1008
SacII	CCGCGG	1 cut(s)	82
SapI	GCTCTTC	1 cut(s)	761
SaqAI	TTAA	2 cut(s)	618, 909
SatI	GCNGC	9 cut(s)	82, 224, 431, 462, 465, 501, 533, 536, 918
Sau3AI	GATC	6 cut(s)	4, 564, 720, 870, 1110, 1185
Sau96I	GGNCC	4 cut(s)	107, 268, 598, 1393
SchI	GAGTC	2 cut(s)	1283, 1423
ScrFI	CCNGG	6 cut(s)	105, 257, 334, 1344, 1345, 1422
SduI	GDGCHC	3 cut(s)	375, 693, 1008
SfaNI	GCATC	1 cut(s)	1135
SfcI	CTRYAG	2 cut(s)	48, 533
Sfr303I	CCGCGG	1 cut(s)	82
SgrBI	CCGCGG	1 cut(s)	82
SinI	GGWCC	4 cut(s)	107, 268, 598, 1393
SmaI	CCCGGG	1 cut(s)	1345
SmiMI	CAYNNNNRTG	1 cut(s)	1496
SmlI	CTYRAG	1 cut(s)	617
SmoI	CTYRAG	1 cut(s)	617
SnaBI	TACGTA	1 cut(s)	524
Sse9I	AATT	2 cut(s)	191, 667
SseBI	AGGCCT	1 cut(s)	1252
SspMI	CTAG	2 cut(s)	1019, 1208
SstI	GAGCTC	1 cut(s)	1008
StuI	AGGCCT	1 cut(s)	1252
StyD4I	CCNGG	6 cut(s)	103, 255, 332, 1342, 1343, 1420
StyI	CCWWGG	5 cut(s)	261, 1018, 1024, 1369, 1505
TaaI	ACNGT	7 cut(s)	361, 368, 403, 674, 1015, 1065, 1461
TaiI	ACGT	6 cut(s)	204, 315, 483, 526, 915, 1390
TaqI	TCGA	8 cut(s)	288, 321, 573, 774, 900, 945, 1008, 1164
TasI	AATT	2 cut(s)	191, 667
TatI	WGTACW	2 cut(s)	546, 558
TauI	GCSGC	5 cut(s)	84, 464, 467, 503, 920
TfiI	GAWTC	1 cut(s)	748
Tru1I	TTAA	2 cut(s)	618, 909
Tru9I	TTAA	2 cut(s)	618, 909
TscAI	CASTG	4 cut(s)	380, 1018, 1232, 1365
TseFI	GTSAC	4 cut(s)	246, 674, 805, 1036
TseI	GCWGC	4 cut(s)	223, 430, 532, 535
Tsp45I	GTSAC	4 cut(s)	246, 674, 805, 1036
TspDTI	ATGAA	5 cut(s)	31, 196, 831, 1148, 1514
TspGWI	ACGGA	2 cut(s)	1305, 1460
TspMI	CCCGGG	1 cut(s)	1343
TspRI	CASTG	4 cut(s)	380, 1018, 1232, 1365
Tth111I	GACNNNGTC	2 cut(s)	884, 1013
Van91I	CCANNNNNTGG	2 cut(s)	847, 1370
Vha464I	CTTAAG	1 cut(s)	617
VpaK11BI	GGWCC	4 cut(s)	107, 268, 598, 1393
XagI	CCTNNNNNAGG	2 cut(s)	260, 1419
XapI	RAATTY	1 cut(s)	191
XceI	RCATGY	1 cut(s)	559
XcmI	CCANNNNNNNNNTGG	1 cut(s)	511
XmaI	CCCGGG	1 cut(s)	1343
XmaJI	CCTAGG	1 cut(s)	1018
XspI	CTAG	2 cut(s)	1019, 1208

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.