AT2G30980
ERF Family

belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
13182025 .. 13185973
3949 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G30980.1

Sequence Viewer

Length: 1239 bp
ATGACTTCGATACCATTGGGGCCTCCTCAGCCTCCGTCTTTAGCTCCTCAGCCGCCGCATCTTCACGGCGGAGATTCTTTGAAACGTCGTCCCGATATAGACAACGACAAGGAAATGTCTGCTGCTGTTATAGAAGGAAATGATGCTGTTACCGGTCACATAATTTCTACTACAATTGGAGGCAAAAATGGTGAACCTAAACAGACCATTAGTTACATGGCCGAACGTGTTGTTGGAACAGGATCATTCGGAATTGTATTCCAGGCAAAATGCTTGGAAACTGGAGAATCAGTAGCCATTAAGAAGGTTTTGCAAGATCGCCGTTATAAAAACCGAGAGTTGCAATTAATGCGACTAATGGACCATCCAAATGTGGTTTCCTTGAAGCATTGTTTCTTCTCTACAACGACTAGAGATGAGCTCTTCCTCAATCTCGTTATGGAGTATGTACCAGAGACATTGTACCGGGTTTTGAAGCACTATACTAGTTCAAACCAGCGGATGCCTATCTTCTATGTCAAACTTTACACATACCAAATCTTCAGAGGCTTGGCTTATATCCATACTGCTCCTGGTGTCTGCCACAGAGATGTGAAACCACAAAATCTTTTGGTTGATCCCCTCACCCATCAGTGTAAGCTCTGTGATTTTGGAAGTGCAAAAGTACTGGTGAAAGGTGAAGCAAACATATCATATATCTGCTCTCGGTATTACCGAGCTCCAGAACTCATCTTTGGTGCCACAGAGTATACATCATCCATTGATATATGGTCTGCTGGTTGTGTTCTGGCAGAGCTACTTCTTGGGCAGCCGTTATTCCCGGGAGAAAATTCTGTGGACCAGCTAGTGGAGATCATAAAGGTTCTTGGTACTCCAACTCGCGAAGAAATCCGGTGCATGAACCCAAACTACACAGACTTCAGATTCCCACAAATCAAAGCCCACCCTTGGCATAAGGTTTTCCACAAGCGGATGCCTCCGGAAGCCATTGACCTTGCATCTCGGCTTCTTCAATACTCACCAAGTCTACGTTGCACTGCGCTCGAGGCATGTGCGCATCCGTTTTTCAATGAACTCCGTGAGCCAAATGCTCGTCTTCCAAATGGCCGACCTCTACCACCGTTGTTCAACTTCAAACAAGAGTTGTCTGGGGCTTCACCGGAGCTTATCAACAGGCTAATACCAGAGCATGTGAGGCGACAGATGAATGGTGGCTTTCCATTTCAAGCTGGACCCTAG
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

412

Amino Acids

46.45

Weight (kDa)

8.7

Isoelectric Point (pI)

46.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 73 - 356 2.7e-61 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 75 - 276 2.2e-24 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 327
Acc16I TGCGCA 1 cut(s) 1056
AccB1I GGYRCC 1 cut(s) 737
AccB7I CCANNNNNTGG 1 cut(s) 847
AccI GTMKAC 2 cut(s) 749, 1027
AccII CGCG 1 cut(s) 882
AccIII TCCGGA 1 cut(s) 979
AciI CCGC 5 cut(s) 53, 56, 69, 499, 970
AclWI GGATC 2 cut(s) 250, 611
AcoI YGGCCR 2 cut(s) 219, 1105
AcsI RAATTY 1 cut(s) 829
AcuI CTGAAG 2 cut(s) 526, 904
AfaI GTAC 4 cut(s) 450, 464, 666, 871
AfiI CCNNNNNNNGG 2 cut(s) 847, 948
AflIII ACRYGT 1 cut(s) 226
AgeI ACCGGT 1 cut(s) 152
AgsI TTSAA 9 cut(s) 82, 385, 475, 492, 1013, 1069, 1129, 1135, 1226
AhlI ACTAGT 1 cut(s) 485
AjnI CCWGG 2 cut(s) 261, 571
AjuI GAANNNNNNNTTGG 6 cut(s) 216, 248, 361, 393, 717, 749
AluBI AGCT 8 cut(s) 44, 421, 640, 719, 796, 844, 1165, 1229
AluI AGCT 8 cut(s) 44, 421, 640, 719, 796, 844, 1165, 1229
Alw21I GWGCWC 2 cut(s) 423, 721
Alw26I GTCTC 1 cut(s) 449
AlwI GGATC 2 cut(s) 250, 611
Ama87I CYCGRG 2 cut(s) 820, 1043
Aor13HI TCCGGA 1 cut(s) 979
AoxI GGCC 3 cut(s) 20, 219, 1105
ApeKI GCWGC 2 cut(s) 122, 808
ApoI RAATTY 1 cut(s) 829
AseI ATTAAT 1 cut(s) 347
AsiGI ACCGGT 1 cut(s) 152
AspLEI GCGC 2 cut(s) 1042, 1057
AspS9I GGNCC 4 cut(s) 20, 361, 838, 1232
AsuC2I CCSGG 3 cut(s) 467, 821, 822
AsuHPI GGTGA 6 cut(s) 203, 616, 682, 689, 1011, 1149
AvaI CYCGRG 2 cut(s) 820, 1043
AvaII GGWCC 3 cut(s) 361, 838, 1232
BanI GGYRCC 1 cut(s) 737
BanII GRGCYC 2 cut(s) 423, 721
BbsI GAAGAC 1 cut(s) 1088
Bbv12I GWGCWC 2 cut(s) 423, 721
BbvCI CCTCAGC 2 cut(s) 27, 48
BbvI GCAGC 2 cut(s) 109, 820
BccI CCATC 2 cut(s) 372, 636
BceAI ACGGC 3 cut(s) 82, 306, 796
BcgI CGANNNNNNTGC 4 cut(s) 1024, 1034, 1058, 1068
BciT130I CCWGG 2 cut(s) 263, 573
BcnI CCSGG 3 cut(s) 467, 821, 822
BcoDI GTCTC 1 cut(s) 449
BcuI ACTAGT 1 cut(s) 485
BfaI CTAG 4 cut(s) 411, 486, 845, 1237
BisI GCNGC 4 cut(s) 53, 56, 123, 809
BlsI GCNGC 4 cut(s) 54, 57, 124, 810
BmcAI AGTACT 1 cut(s) 666
Bme1390I CCNGG 5 cut(s) 263, 467, 573, 821, 822
Bme18I GGWCC 3 cut(s) 361, 838, 1232
BmeT110I CYCGRG 2 cut(s) 820, 1043
BmgT120I GGNCC 4 cut(s) 20, 361, 838, 1232
BmiI GGNNCC 3 cut(s) 21, 739, 1234
BmrFI CCNGG 5 cut(s) 263, 467, 573, 821, 822
BmsI GCATC 6 cut(s) 67, 133, 492, 963, 1007, 1066
BpiI GAAGAC 1 cut(s) 1088
BplI GAGNNNNNCTC 2 cut(s) 405, 437
BpmI CTGGAG 2 cut(s) 303, 705
Bpu10I CCTNAGC 2 cut(s) 27, 48
BpuMI CCSGG 3 cut(s) 467, 821, 822
BsaBI GATNNNNATC 1 cut(s) 506
BsaJI CCNNGG 2 cut(s) 820, 947
BsaWI WCCGGW 4 cut(s) 152, 891, 979, 1159
BsaXI ACNNNNNCTCC 2 cut(s) 276, 306
Bsc4I CCNNNNNNNGG 2 cut(s) 847, 948
Bse118I RCCGGY 1 cut(s) 152
Bse1I ACTGG 2 cut(s) 286, 672
Bse8I GATNNNNATC 1 cut(s) 506
BseAI TCCGGA 1 cut(s) 979
BseBI CCWGG 2 cut(s) 263, 573
BseDI CCNNGG 2 cut(s) 820, 947
BseGI GGATG 5 cut(s) 364, 507, 755, 978, 1057
BseJI GATNNNNATC 1 cut(s) 506
BseLI CCNNNNNNNGG 2 cut(s) 847, 948
BseMII CTCAG 2 cut(s) 41, 62
BseNI ACTGG 2 cut(s) 286, 672
BseRI GAGGAG 2 cut(s) 15, 36
BseXI GCAGC 2 cut(s) 109, 820
Bsh1236I CGCG 1 cut(s) 882
BshFI GGCC 3 cut(s) 22, 221, 1107
BshNI GGYRCC 1 cut(s) 737
BshTI ACCGGT 1 cut(s) 152
BsiHKAI GWGCWC 2 cut(s) 423, 721
BsiHKCI CYCGRG 2 cut(s) 820, 1043
BsiSI CCGG 6 cut(s) 153, 466, 821, 892, 980, 1160
BslFI GGGAC 1 cut(s) 75
BslI CCNNNNNNNGG 2 cut(s) 847, 948
BsmAI GTCTC 1 cut(s) 449
BsmFI GGGAC 1 cut(s) 75
BsnI GGCC 3 cut(s) 22, 221, 1107
BsoBI CYCGRG 2 cut(s) 820, 1043
Bsp1286I GDGCHC 2 cut(s) 423, 721
Bsp13I TCCGGA 1 cut(s) 979
Bsp143I GATC 4 cut(s) 242, 316, 616, 852
Bsp68I TCGCGA 1 cut(s) 882
BspACI CCGC 5 cut(s) 53, 56, 69, 499, 970
BspANI GGCC 3 cut(s) 22, 221, 1107
BspCNI CTCAG 2 cut(s) 40, 61
BspEI TCCGGA 1 cut(s) 979
BspFNI CGCG 1 cut(s) 882
BspLI GGNNCC 3 cut(s) 21, 739, 1234
BspPI GGATC 2 cut(s) 250, 611
BspQI GCTCTTC 1 cut(s) 428
BspT107I GGYRCC 1 cut(s) 737
BsrFI RCCGGY 1 cut(s) 152
BsrI ACTGG 2 cut(s) 286, 672
BssAI RCCGGY 1 cut(s) 152
BssECI CCNNGG 2 cut(s) 820, 947
BssMI GATC 4 cut(s) 242, 316, 616, 852
BssNAI GTATAC 1 cut(s) 750
BssT1I CCWWGG 1 cut(s) 947
Bst1107I GTATAC 1 cut(s) 750
Bst2UI CCWGG 2 cut(s) 263, 573
Bst4CI ACNGT 1 cut(s) 1122
Bst6I CTCTTC 1 cut(s) 428
BstAPI GCANNNNNTGC 1 cut(s) 349
BstDEI CTNAG 2 cut(s) 27, 48
BstF5I GGATG 5 cut(s) 364, 507, 755, 978, 1057
BstFNI CGCG 1 cut(s) 882
BstHHI GCGC 2 cut(s) 1042, 1057
BstKTI GATC 4 cut(s) 245, 319, 619, 855
BstMAI GTCTC 1 cut(s) 449
BstMBI GATC 4 cut(s) 242, 316, 616, 852
BstMWI GCNNNNNNNGC 4 cut(s) 28, 349, 1046, 1195
BstNI CCWGG 2 cut(s) 263, 573
BstNSI RCATGY 2 cut(s) 1053, 1193
BstSCI CCNGG 5 cut(s) 261, 465, 571, 819, 820
BstUI CGCG 1 cut(s) 882
BstV1I GCAGC 2 cut(s) 109, 820
BstV2I GAAGAC 1 cut(s) 1088
BstZ17I GTATAC 1 cut(s) 750
BsuRI GGCC 3 cut(s) 22, 221, 1107
BtsCI GGATG 5 cut(s) 364, 507, 755, 978, 1057
BtsI GCAGTG 1 cut(s) 1035
BtsIMutI CAGTG 2 cut(s) 638, 1035
BtuMI TCGCGA 1 cut(s) 882
CfoI GCGC 2 cut(s) 1042, 1057
Cfr10I RCCGGY 1 cut(s) 152
Cfr13I GGNCC 4 cut(s) 20, 361, 838, 1232
Cfr9I CCCGGG 1 cut(s) 820
Csp6I GTAC 4 cut(s) 449, 463, 665, 870
CspAI ACCGGT 1 cut(s) 152
CviAII CATG 4 cut(s) 217, 898, 1050, 1190
CviQI GTAC 4 cut(s) 449, 463, 665, 870
DdeI CTNAG 2 cut(s) 27, 48
DpnI GATC 4 cut(s) 244, 318, 618, 854
DpnII GATC 4 cut(s) 242, 316, 616, 852
EaeI YGGCCR 2 cut(s) 219, 1105
Eam1104I CTCTTC 1 cut(s) 428
EarI CTCTTC 1 cut(s) 428
EciI GGCGGA 1 cut(s) 84
Ecl136II GAGCTC 2 cut(s) 421, 719
Eco130I CCWWGG 1 cut(s) 947
Eco24I GRGCYC 2 cut(s) 423, 721
Eco47I GGWCC 3 cut(s) 361, 838, 1232
Eco53kI GAGCTC 2 cut(s) 421, 719
Eco57I CTGAAG 2 cut(s) 526, 904
Eco88I CYCGRG 2 cut(s) 820, 1043
EcoICRI GAGCTC 2 cut(s) 421, 719
EcoO109I RGGNCCY 1 cut(s) 20
EcoRII CCWGG 2 cut(s) 261, 571
EcoT14I CCWWGG 1 cut(s) 947
EcoT38I GRGCYC 2 cut(s) 423, 721
ErhI CCWWGG 1 cut(s) 947
FaeI CATG 4 cut(s) 220, 901, 1053, 1193
FaqI GGGAC 1 cut(s) 75
FatI CATG 4 cut(s) 216, 897, 1049, 1189
FblI GTMKAC 2 cut(s) 749, 1027
Fnu4HI GCNGC 4 cut(s) 53, 56, 123, 809
FokI GGATG 5 cut(s) 351, 514, 742, 985, 1044
FriOI GRGCYC 2 cut(s) 423, 721
Fsp4HI GCNGC 4 cut(s) 53, 56, 123, 809
FspAI RTGCGCAY 1 cut(s) 1056
FspBI CTAG 4 cut(s) 411, 486, 845, 1237
FspI TGCGCA 1 cut(s) 1056
GlaI GCGC 2 cut(s) 1041, 1056
GluI GCNGC 4 cut(s) 53, 56, 123, 809
GsuI CTGGAG 2 cut(s) 303, 705
HaeIII GGCC 3 cut(s) 22, 221, 1107
HapII CCGG 6 cut(s) 153, 466, 821, 892, 980, 1160
HhaI GCGC 2 cut(s) 1042, 1057
Hin1II CATG 4 cut(s) 220, 901, 1053, 1193
Hin6I GCGC 2 cut(s) 1040, 1055
HinP1I GCGC 2 cut(s) 1040, 1055
HinfI GANTC 3 cut(s) 74, 287, 924
HpaII CCGG 6 cut(s) 153, 466, 821, 892, 980, 1160
HphI GGTGA 6 cut(s) 203, 616, 682, 689, 1011, 1149
Hpy166II GTNNAC 4 cut(s) 194, 750, 838, 1028
Hpy188I TCNGA 3 cut(s) 251, 545, 923
Hpy188III TCNNGA 4 cut(s) 92, 722, 881, 980
Hpy8I GTNNAC 4 cut(s) 194, 750, 838, 1028
Hpy99I CGWCG 1 cut(s) 90
HpyAV CCTTC 2 cut(s) 128, 298
HpyCH4III ACNGT 1 cut(s) 1122
HpyCH4IV ACGT 3 cut(s) 85, 226, 1030
HpyCH4V TGCA 6 cut(s) 313, 343, 659, 897, 998, 1035
HpyF10VI GCNNNNNNNGC 4 cut(s) 28, 349, 1046, 1195
HpyF3I CTNAG 2 cut(s) 27, 48
HpySE526I ACGT 3 cut(s) 85, 226, 1030
Hsp92II CATG 4 cut(s) 220, 901, 1053, 1193
HspAI GCGC 2 cut(s) 1040, 1055
Kpn2I TCCGGA 1 cut(s) 979
Kzo9I GATC 4 cut(s) 242, 316, 616, 852
LguI GCTCTTC 1 cut(s) 428
LmnI GCTCC 4 cut(s) 49, 574, 724, 1162
Lsp1109I GCAGC 2 cut(s) 109, 820
LweI GCATC 6 cut(s) 67, 133, 492, 963, 1007, 1066
MaeI CTAG 4 cut(s) 411, 486, 845, 1237
MaeII ACGT 3 cut(s) 85, 226, 1030
MaeIII GTNAC 3 cut(s) 148, 155, 212
MalI GATC 4 cut(s) 244, 318, 618, 854
MboI GATC 4 cut(s) 242, 316, 616, 852
MboII GAAGA 8 cut(s) 53, 388, 415, 502, 532, 896, 1001, 1088
MfeI CAATTG 1 cut(s) 174
MhlI GDGCHC 2 cut(s) 423, 721
MluCI AATT 5 cut(s) 162, 174, 252, 344, 829
MmeI TCCRAC 2 cut(s) 214, 899
MroI TCCGGA 1 cut(s) 979
MseI TTAA 2 cut(s) 300, 347
MslI CAYNNNNRTG 2 cut(s) 369, 588
MspA1I CMGCKG 1 cut(s) 499
MspI CCGG 6 cut(s) 153, 466, 821, 892, 980, 1160
MspR9I CCNGG 5 cut(s) 263, 467, 573, 821, 822
MunI CAATTG 1 cut(s) 174
MvaI CCWGG 2 cut(s) 263, 573
MvnI CGCG 1 cut(s) 882
MwoI GCNNNNNNNGC 4 cut(s) 28, 349, 1046, 1195
NciI CCSGG 3 cut(s) 467, 821, 822
NdeII GATC 4 cut(s) 242, 316, 616, 852
NlaIII CATG 4 cut(s) 220, 901, 1053, 1193
NlaIV GGNNCC 3 cut(s) 21, 739, 1234
NmeAIII GCCGAG 1 cut(s) 982
NmuCI GTSAC 1 cut(s) 155
NruI TCGCGA 1 cut(s) 882
NsbI TGCGCA 1 cut(s) 1056
NspI RCATGY 2 cut(s) 1053, 1193
PaeR7I CTCGAG 1 cut(s) 1043
PciSI GCTCTTC 1 cut(s) 428
PcsI WCGNNNNNNNCGW 1 cut(s) 712
PfeI GAWTC 3 cut(s) 74, 287, 924
PflMI CCANNNNNTGG 1 cut(s) 847
PinAI ACCGGT 1 cut(s) 152
PkrI GCNGC 4 cut(s) 54, 57, 124, 810
PshBI ATTAAT 1 cut(s) 347
PsiI TTATAA 1 cut(s) 327
Psp124BI GAGCTC 2 cut(s) 423, 721
Psp6I CCWGG 2 cut(s) 261, 571
PspGI CCWGG 2 cut(s) 261, 571
PspN4I GGNNCC 3 cut(s) 21, 739, 1234
PspPI GGNCC 4 cut(s) 20, 361, 838, 1232
PspXI VCTCGAGB 1 cut(s) 1043
PsrI GAACNNNNNNTAC 2 cut(s) 893, 925
RruI TCGCGA 1 cut(s) 882
RsaI GTAC 4 cut(s) 450, 464, 666, 871
RsaNI GTAC 4 cut(s) 449, 463, 665, 870
RseI CAYNNNNRTG 2 cut(s) 369, 588
SacI GAGCTC 2 cut(s) 423, 721
SapI GCTCTTC 1 cut(s) 428
SaqAI TTAA 2 cut(s) 300, 347
SatI GCNGC 4 cut(s) 53, 56, 123, 809
Sau3AI GATC 4 cut(s) 242, 316, 616, 852
Sau96I GGNCC 4 cut(s) 20, 361, 838, 1232
ScaI AGTACT 1 cut(s) 666
ScrFI CCNGG 5 cut(s) 263, 467, 573, 821, 822
SduI GDGCHC 2 cut(s) 423, 721
SfaNI GCATC 6 cut(s) 67, 133, 492, 963, 1007, 1066
Sfr274I CTCGAG 1 cut(s) 1043
SinI GGWCC 3 cut(s) 361, 838, 1232
SlaI CTCGAG 1 cut(s) 1043
SmaI CCCGGG 1 cut(s) 822
SmiMI CAYNNNNRTG 2 cut(s) 369, 588
SmlI CTYRAG 1 cut(s) 1043
SmoI CTYRAG 1 cut(s) 1043
SpeI ACTAGT 1 cut(s) 485
Sse9I AATT 5 cut(s) 162, 174, 252, 344, 829
SsiI CCGC 5 cut(s) 53, 56, 69, 499, 970
SspMI CTAG 4 cut(s) 411, 486, 845, 1237
SstI GAGCTC 2 cut(s) 423, 721
StyD4I CCNGG 5 cut(s) 261, 465, 571, 819, 820
StyI CCWWGG 1 cut(s) 947
TaaI ACNGT 1 cut(s) 1122
TaiI ACGT 3 cut(s) 88, 229, 1033
TaqI TCGA 2 cut(s) 8, 1044
TasI AATT 5 cut(s) 162, 174, 252, 344, 829
TatI WGTACW 1 cut(s) 664
TauI GCSGC 2 cut(s) 55, 58
TfiI GAWTC 3 cut(s) 74, 287, 924
Tru1I TTAA 2 cut(s) 300, 347
Tru9I TTAA 2 cut(s) 300, 347
TscAI CASTG 2 cut(s) 638, 1042
TseFI GTSAC 1 cut(s) 155
TseI GCWGC 2 cut(s) 122, 808
Tsp45I GTSAC 1 cut(s) 155
TspDTI ATGAA 3 cut(s) 914, 1086, 1220
TspGWI ACGGA 3 cut(s) 24, 1050, 1067
TspMI CCCGGG 1 cut(s) 820
TspRI CASTG 2 cut(s) 638, 1042
Van91I CCANNNNNTGG 1 cut(s) 847
VpaK11BI GGWCC 3 cut(s) 361, 838, 1232
VspI ATTAAT 1 cut(s) 347
XapI RAATTY 1 cut(s) 829
XceI RCATGY 2 cut(s) 1053, 1193
XcmI CCANNNNNNNNNTGG 2 cut(s) 214, 569
XhoI CTCGAG 1 cut(s) 1043
XmaI CCCGGG 1 cut(s) 820
XmiI GTMKAC 2 cut(s) 749, 1027
XspI CTAG 4 cut(s) 411, 486, 845, 1237
ZrmI AGTACT 1 cut(s) 666
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.