Rh2CG330600
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0006440
Physical Location & Seq
Forward (+)
43251576 .. 43257561
5986 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG330600.1

Sequence Viewer

Length: 1155 bp
ATGTTTACCATTGTTGCTGAATTGCAGGAAATGTCGGCTCCTGTTATTGAGGGAAATGATGCAGTCACTGGTCACATCATTTCCACGACCATTGGTGGGAAAAATGGCGAACCCAAACGGACAATTAGTTATATGGCAGAGCGTGCTGTTGGTACTGGATCATTTGGAATCGTATTTCAGGCAAAATGCTTAGAAACCGGAGAAACGGTGGCCATAAAGAAGGTGTTGCAGGACAGGAGATATAAAAATCGAGAGTTGCAGCTGATGCGTTTGATGGATCACCCAAATGTTGTTTCCCTGAAGCATTGTTTCTTCTCTACAACGACTAAAGATGAGCTTTTCCTGAATTTGGTCATGGAATATGTACCCGAGACTATGTACAGGGTTCTGAAGCACTACAGTAGTATGAACCATAGGATGCCACTCATCTATGTGAAACTTTATACATATCAAATCTTTAGGGGCCTTGCTTATATCCATGCTGTTCCCGGGGTTTGCCATAGAGATGTGAAACCTCAAAATCTTTTGGTTGATCCCCTCACCCATCAGGTTAAGATTTGCGACTTTGGAAGTGCAAAAGTATTGGTCAGGGGTGAAGCAAACATTTCCTACATATGTTCTCGCTACTATCGGGCTCCTGAGCTCATCTTTGGTGCAACGGAATATACAACATCCATCGATATCTGGTCAGCTGGTTGTGTCCTTGCTGAGCTCCTTCTAGGCCAGCCGTTGTTTCCAGGAGAGAATGCAGTGGATCAACTTGTAGAGATTATCAAGGTTCTTGGTACTCCAACCAGAGAAGAAATTCGATGCATGAATCCAAACTATACTGATTTTAGGTTCCCTCAGATCAAAGCTCATCCTTGGCATAAGGTTTTCCATAAACGAATGCCACCAGAAGCAATTGACCTTGCTTCACGGCTCCTTCAATATTCACCAAGTCTACGCTGCACTGCGCTTGAAGCATGCACACATTCTTTTTTTGACGAACTTCGTGAGCCTAATGCACGCCTTCCAAATGGCCGCCCTTTGCCGCCTCTTTTCAACTTCAAACAAGAATTAAATGGAGCATCACCTGAACTGATCAGCAGGCTCATACCAGAGCATATGCGGCAGCAGGTTGGTCTTGGATTCCCACACCCAGCAGGTACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010646 GO:0010648 GO:0014070 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023051 GO:0023052 GO:0023057 GO:0032870 GO:0032879 GO:0032880 GO:0032991 GO:0033993 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048519 GO:0048523 GO:0048545 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0061695 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0140096 GO:1900457 GO:1900458 GO:1901564 GO:1901700 GO:1901701 GO:1902494 GO:1902911 GO:1990234
KEGG Pathways
Metabolic & Signaling
ko01521 ko04012 ko04062 ko04075 ko04110 ko04150 ko04151 ko04310 ko04340 ko04341 ko04360 ko04390 ko04510 ko04550 ko04657 ko04660 ko04662 ko04711 ko04722 ko04728 ko04910 ko04916 ko04917 ko04919 ko04931 ko04932 ko04934 ko05010 ko05160 ko05162 ko05164 ko05165 ko05166 ko05167 ko05169 ko05200 ko05210 ko05213 ko05215 ko05217 ko05224 ko05225 ko05226 map01521 map04012 map04062 map04075 map04110 map04150 map04151 map04310 map04340 map04341 map04360 map04390 map04510 map04550 map04657 map04660 map04662 map04711 map04722 map04728 map04910 map04916 map04917 map04919 map04931 map04932 map04934 map05010 map05160 map05162 map05164 map05165 map05166 map05167 map05169 map05200 map05210 map05213 map05215 map05217 map05224 map05225 map05226
Pfam Domains
Protein Families
Pkinase

Protein Analysis

384

Amino Acids

43.54

Weight (kDa)

8.48

Isoelectric Point (pI)

43.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 45 - 328 4.3e-61 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 47 - 248 8.2e-25 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1108, 1136
AccI GTMKAC 1 cut(s) 943
AciI CCGC 3 cut(s) 1024, 1034, 1111
AclWI GGATC 4 cut(s) 166, 285, 527, 762
AcoI YGGCCR 2 cut(s) 210, 1021
AcsI RAATTY 2 cut(s) 346, 804
AcuI CTGAAG 2 cut(s) 320, 410
AfaI GTAC 5 cut(s) 154, 366, 380, 787, 1150
AfiI CCNNNNNNNGG 2 cut(s) 96, 349
AgsI TTSAA 4 cut(s) 929, 962, 1045, 1051
AjnI CCWGG 1 cut(s) 736
AjuI GAANNNNNNNTTGG 2 cut(s) 277, 309
AluBI AGCT 6 cut(s) 262, 337, 643, 692, 712, 857
AluI AGCT 6 cut(s) 262, 337, 643, 692, 712, 857
Alw21I GWGCWC 2 cut(s) 645, 714
Alw26I GTCTC 1 cut(s) 365
AlwI GGATC 4 cut(s) 166, 285, 527, 762
AlwNI CAGNNNCTG 1 cut(s) 68
Ama87I CYCGRG 2 cut(s) 368, 488
AoxI GGCC 4 cut(s) 210, 463, 721, 1021
ApeKI GCWGC 3 cut(s) 259, 948, 1114
ApoI RAATTY 2 cut(s) 346, 804
Asp700I GAANNNNTTC 1 cut(s) 804
AspLEI GCGC 1 cut(s) 958
AspS9I GGNCC 1 cut(s) 463
AsuC2I CCSGG 2 cut(s) 489, 490
AsuHPI GGTGA 5 cut(s) 272, 532, 605, 927, 1065
AvaI CYCGRG 2 cut(s) 368, 488
BalI TGGCCA 1 cut(s) 212
BanII GRGCYC 3 cut(s) 637, 645, 714
Bbv12I GWGCWC 2 cut(s) 645, 714
BbvI GCAGC 3 cut(s) 271, 935, 1126
BccI CCATC 3 cut(s) 268, 552, 683
BceAI ACGGC 2 cut(s) 712, 935
BciT130I CCWGG 1 cut(s) 738
BclI TGATCA 1 cut(s) 1083
BcnI CCSGG 2 cut(s) 489, 490
BcoDI GTCTC 1 cut(s) 365
BfaI CTAG 1 cut(s) 719
BfmI CTRYAG 1 cut(s) 397
BfuAI ACCTGC 2 cut(s) 1108, 1136
BisI GCNGC 6 cut(s) 260, 949, 1024, 1034, 1112, 1115
BlpI GCTNAGC 1 cut(s) 708
BlsI GCNGC 6 cut(s) 261, 950, 1025, 1035, 1113, 1116
Bme1390I CCNGG 3 cut(s) 489, 490, 738
BmeT110I CYCGRG 2 cut(s) 368, 488
BmgT120I GGNCC 1 cut(s) 463
BmiI GGNNCC 5 cut(s) 39, 464, 636, 842, 923
BmrFI CCNGG 3 cut(s) 489, 490, 738
BmsI GCATC 5 cut(s) 49, 255, 408, 800, 1079
Bpu10I CCTNAGC 1 cut(s) 639
Bpu1102I GCTNAGC 1 cut(s) 708
BpuMI CCSGG 2 cut(s) 489, 490
Bsa29I ATCGAT 1 cut(s) 678
BsaJI CCNNGG 3 cut(s) 488, 489, 863
BsaWI WCCGGW 1 cut(s) 197
BsaXI ACNNNNNCTCC 2 cut(s) 192, 222
Bsc4I CCNNNNNNNGG 2 cut(s) 96, 349
Bse1I ACTGG 2 cut(s) 73, 160
BseBI CCWGG 1 cut(s) 738
BseCI ATCGAT 1 cut(s) 678
BseDI CCNNGG 3 cut(s) 488, 489, 863
BseGI GGATG 3 cut(s) 423, 671, 859
BseLI CCNNNNNNNGG 2 cut(s) 96, 349
BseMII CTCAG 3 cut(s) 630, 699, 860
BseNI ACTGG 2 cut(s) 73, 160
BseXI GCAGC 3 cut(s) 271, 935, 1126
BseYI CCCAGC 1 cut(s) 1141
BsgI GTGCAG 1 cut(s) 934
BshFI GGCC 4 cut(s) 212, 465, 723, 1023
BshVI ATCGAT 1 cut(s) 678
BsiHKAI GWGCWC 2 cut(s) 645, 714
BsiHKCI CYCGRG 2 cut(s) 368, 488
BsiSI CCGG 2 cut(s) 198, 489
BslI CCNNNNNNNGG 2 cut(s) 96, 349
BsmAI GTCTC 1 cut(s) 365
BsmI GAATGC 2 cut(s) 751, 894
BsnI GGCC 4 cut(s) 212, 465, 723, 1023
BsoBI CYCGRG 2 cut(s) 368, 488
Bsp1286I GDGCHC 3 cut(s) 637, 645, 714
Bsp1407I TGTACA 1 cut(s) 378
Bsp143I GATC 6 cut(s) 158, 277, 532, 754, 849, 1083
Bsp1720I GCTNAGC 1 cut(s) 708
BspACI CCGC 3 cut(s) 1024, 1034, 1111
BspANI GGCC 4 cut(s) 212, 465, 723, 1023
BspCNI CTCAG 3 cut(s) 631, 700, 859
BspDI ATCGAT 1 cut(s) 678
BspLI GGNNCC 5 cut(s) 39, 464, 636, 842, 923
BspMI ACCTGC 2 cut(s) 1108, 1136
BspPI GGATC 4 cut(s) 166, 285, 527, 762
BsrGI TGTACA 1 cut(s) 378
BsrI ACTGG 2 cut(s) 73, 160
BssECI CCNNGG 3 cut(s) 488, 489, 863
BssMI GATC 6 cut(s) 158, 277, 532, 754, 849, 1083
BssT1I CCWWGG 1 cut(s) 863
Bst2UI CCWGG 1 cut(s) 738
Bst4CI ACNGT 2 cut(s) 208, 401
BstAPI GCANNNNNTGC 2 cut(s) 143, 265
BstAUI TGTACA 1 cut(s) 378
BstC8I GCNNGC 5 cut(s) 144, 725, 967, 1009, 1091
BstDEI CTNAG 4 cut(s) 190, 639, 708, 846
BstF5I GGATG 3 cut(s) 423, 671, 859
BstHHI GCGC 1 cut(s) 958
BstKTI GATC 6 cut(s) 161, 280, 535, 757, 852, 1086
BstMAI GTCTC 1 cut(s) 365
BstMBI GATC 6 cut(s) 158, 277, 532, 754, 849, 1083
BstMWI GCNNNNNNNGC 4 cut(s) 143, 265, 962, 1111
BstNI CCWGG 1 cut(s) 738
BstNSI RCATGY 1 cut(s) 969
BstSCI CCNGG 3 cut(s) 487, 488, 736
BstSFI CTRYAG 1 cut(s) 397
BstV1I GCAGC 3 cut(s) 271, 935, 1126
Bsu15I ATCGAT 1 cut(s) 678
BsuRI GGCC 4 cut(s) 212, 465, 723, 1023
BsuTUI ATCGAT 1 cut(s) 678
BtsCI GGATG 3 cut(s) 423, 671, 859
BtsI GCAGTG 2 cut(s) 756, 951
BtsIMutI CAGTG 3 cut(s) 66, 756, 951
BveI ACCTGC 2 cut(s) 1108, 1136
Cac8I GCNNGC 5 cut(s) 144, 725, 967, 1009, 1091
CaiI CAGNNNCTG 1 cut(s) 68
CfoI GCGC 1 cut(s) 958
Cfr13I GGNCC 1 cut(s) 463
Cfr9I CCCGGG 1 cut(s) 488
ClaI ATCGAT 1 cut(s) 678
Csp6I GTAC 5 cut(s) 153, 365, 379, 786, 1149
CspCI CAANNNNNGTGG 2 cut(s) 73, 108
CviAII CATG 4 cut(s) 355, 479, 814, 966
CviQI GTAC 5 cut(s) 153, 365, 379, 786, 1149
DdeI CTNAG 4 cut(s) 190, 639, 708, 846
DpnI GATC 6 cut(s) 160, 279, 534, 756, 851, 1085
DpnII GATC 6 cut(s) 158, 277, 532, 754, 849, 1083
EaeI YGGCCR 2 cut(s) 210, 1021
Ecl136II GAGCTC 2 cut(s) 643, 712
Eco130I CCWWGG 1 cut(s) 863
Eco24I GRGCYC 3 cut(s) 637, 645, 714
Eco32I GATATC 1 cut(s) 682
Eco53kI GAGCTC 2 cut(s) 643, 712
Eco57I CTGAAG 2 cut(s) 320, 410
Eco88I CYCGRG 2 cut(s) 368, 488
EcoICRI GAGCTC 2 cut(s) 643, 712
EcoO109I RGGNCCY 1 cut(s) 463
EcoRII CCWGG 1 cut(s) 736
EcoRV GATATC 1 cut(s) 682
EcoT14I CCWWGG 1 cut(s) 863
EcoT22I ATGCAT 1 cut(s) 815
EcoT38I GRGCYC 3 cut(s) 637, 645, 714
ErhI CCWWGG 1 cut(s) 863
FaeI CATG 4 cut(s) 358, 482, 817, 969
FalI AAGNNNNNCTT 2 cut(s) 321, 353
FatI CATG 4 cut(s) 354, 478, 813, 965
FauNDI CATATG 2 cut(s) 614, 1107
FbaI TGATCA 1 cut(s) 1083
FblI GTMKAC 1 cut(s) 943
Fnu4HI GCNGC 6 cut(s) 260, 949, 1024, 1034, 1112, 1115
FokI GGATG 3 cut(s) 430, 658, 846
FriOI GRGCYC 3 cut(s) 637, 645, 714
Fsp4HI GCNGC 6 cut(s) 260, 949, 1024, 1034, 1112, 1115
FspBI CTAG 1 cut(s) 719
GlaI GCGC 1 cut(s) 957
GluI GCNGC 6 cut(s) 260, 949, 1024, 1034, 1112, 1115
GsaI CCCAGC 1 cut(s) 1145
HaeIII GGCC 4 cut(s) 212, 465, 723, 1023
HapII CCGG 2 cut(s) 198, 489
HhaI GCGC 1 cut(s) 958
Hin1II CATG 4 cut(s) 358, 482, 817, 969
Hin6I GCGC 1 cut(s) 956
HinP1I GCGC 1 cut(s) 956
HinfI GANTC 3 cut(s) 168, 817, 1131
HpaII CCGG 2 cut(s) 198, 489
HphI GGTGA 5 cut(s) 272, 532, 605, 927, 1065
Hpy166II GTNNAC 2 cut(s) 6, 944
Hpy188I TCNGA 2 cut(s) 390, 849
Hpy188III TCNNGA 4 cut(s) 251, 343, 638, 995
Hpy8I GTNNAC 2 cut(s) 6, 944
HpyAV CCTTC 4 cut(s) 214, 725, 935, 1022
HpyCH4III ACNGT 2 cut(s) 208, 401
HpyF10VI GCNNNNNNNGC 4 cut(s) 143, 265, 962, 1111
HpyF3I CTNAG 4 cut(s) 190, 639, 708, 846
Hsp92II CATG 4 cut(s) 358, 482, 817, 969
HspAI GCGC 1 cut(s) 956
Ksp22I TGATCA 1 cut(s) 1083
Kzo9I GATC 6 cut(s) 158, 277, 532, 754, 849, 1083
LmnI GCTCC 5 cut(s) 43, 640, 717, 927, 1067
Lsp1109I GCAGC 3 cut(s) 271, 935, 1126
LweI GCATC 5 cut(s) 49, 255, 408, 800, 1079
MaeI CTAG 1 cut(s) 719
MaeIII GTNAC 2 cut(s) 64, 71
MalI GATC 6 cut(s) 160, 279, 534, 756, 851, 1085
MboI GATC 6 cut(s) 158, 277, 532, 754, 849, 1083
MboII GAAGA 2 cut(s) 304, 812
MfeI CAATTG 1 cut(s) 903
MhlI GDGCHC 3 cut(s) 637, 645, 714
MlsI TGGCCA 1 cut(s) 212
MluCI AATT 6 cut(s) 20, 123, 346, 804, 903, 1058
MluNI TGGCCA 1 cut(s) 212
MmeI TCCRAC 1 cut(s) 815
MnlI CCTC 5 cut(s) 43, 525, 548, 855, 1047
Mox20I TGGCCA 1 cut(s) 212
Mph1103I ATGCAT 1 cut(s) 815
MroXI GAANNNNTTC 1 cut(s) 804
MscI TGGCCA 1 cut(s) 212
MseI TTAA 3 cut(s) 552, 1061, 1153
MslI CAYNNNNRTG 3 cut(s) 285, 431, 504
Msp20I TGGCCA 1 cut(s) 212
MspA1I CMGCKG 2 cut(s) 262, 692
MspI CCGG 2 cut(s) 198, 489
MspR9I CCNGG 3 cut(s) 489, 490, 738
MunI CAATTG 1 cut(s) 903
Mva1269I GAATGC 2 cut(s) 751, 894
MvaI CCWGG 1 cut(s) 738
MwoI GCNNNNNNNGC 4 cut(s) 143, 265, 962, 1111
NciI CCSGG 2 cut(s) 489, 490
NdeI CATATG 2 cut(s) 614, 1107
NdeII GATC 6 cut(s) 158, 277, 532, 754, 849, 1083
NlaIII CATG 4 cut(s) 358, 482, 817, 969
NlaIV GGNNCC 5 cut(s) 39, 464, 636, 842, 923
NmuCI GTSAC 2 cut(s) 64, 71
NsiI ATGCAT 1 cut(s) 815
NspI RCATGY 1 cut(s) 969
PaeI GCATGC 1 cut(s) 969
PctI GAATGC 2 cut(s) 751, 894
PdmI GAANNNNTTC 1 cut(s) 804
PfeI GAWTC 3 cut(s) 168, 817, 1131
PfoI TCCNGGA 1 cut(s) 736
PkrI GCNGC 6 cut(s) 261, 950, 1025, 1035, 1113, 1116
Psp124BI GAGCTC 2 cut(s) 645, 714
Psp6I CCWGG 1 cut(s) 736
PspFI CCCAGC 1 cut(s) 1141
PspGI CCWGG 1 cut(s) 736
PspN4I GGNNCC 5 cut(s) 39, 464, 636, 842, 923
PspPI GGNCC 1 cut(s) 463
PstNI CAGNNNCTG 1 cut(s) 68
PvuII CAGCTG 2 cut(s) 262, 692
RsaI GTAC 5 cut(s) 154, 366, 380, 787, 1150
RsaNI GTAC 5 cut(s) 153, 365, 379, 786, 1149
RseI CAYNNNNRTG 3 cut(s) 285, 431, 504
SacI GAGCTC 2 cut(s) 645, 714
SaqAI TTAA 3 cut(s) 552, 1061, 1153
SatI GCNGC 6 cut(s) 260, 949, 1024, 1034, 1112, 1115
Sau3AI GATC 6 cut(s) 158, 277, 532, 754, 849, 1083
Sau96I GGNCC 1 cut(s) 463
ScrFI CCNGG 3 cut(s) 489, 490, 738
SduI GDGCHC 3 cut(s) 637, 645, 714
SfaNI GCATC 5 cut(s) 49, 255, 408, 800, 1079
SfcI CTRYAG 1 cut(s) 397
SmaI CCCGGG 1 cut(s) 490
SmiMI CAYNNNNRTG 3 cut(s) 285, 431, 504
SphI GCATGC 1 cut(s) 969
Sse9I AATT 6 cut(s) 20, 123, 346, 804, 903, 1058
SsiI CCGC 3 cut(s) 1024, 1034, 1111
SspI AATATT 1 cut(s) 932
SspMI CTAG 1 cut(s) 719
SstI GAGCTC 2 cut(s) 645, 714
StyD4I CCNGG 3 cut(s) 487, 488, 736
StyI CCWWGG 1 cut(s) 863
TaaI ACNGT 2 cut(s) 208, 401
TaqI TCGA 3 cut(s) 250, 678, 808
TasI AATT 6 cut(s) 20, 123, 346, 804, 903, 1058
TatI WGTACW 1 cut(s) 378
TauI GCSGC 3 cut(s) 1026, 1036, 1114
TfiI GAWTC 3 cut(s) 168, 817, 1131
Tru1I TTAA 3 cut(s) 552, 1061, 1153
Tru9I TTAA 3 cut(s) 552, 1061, 1153
TscAI CASTG 3 cut(s) 73, 756, 958
TseFI GTSAC 2 cut(s) 64, 71
TseI GCWGC 3 cut(s) 259, 948, 1114
Tsp45I GTSAC 2 cut(s) 64, 71
TspDTI ATGAA 2 cut(s) 422, 830
TspGWI ACGGA 2 cut(s) 133, 674
TspMI CCCGGG 1 cut(s) 488
TspRI CASTG 3 cut(s) 73, 756, 958
XapI RAATTY 2 cut(s) 346, 804
XceI RCATGY 1 cut(s) 969
XmaI CCCGGG 1 cut(s) 488
XmiI GTMKAC 1 cut(s) 943
XmnI GAANNNNTTC 1 cut(s) 804
XspI CTAG 1 cut(s) 719
Zsp2I ATGCAT 1 cut(s) 815
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.