MD17G1265100.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Reverse (-)
32550930 .. 32556652
5723 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1265100.v1.1.491

Sequence Viewer

Length: 1251 bp
ATGGCCTCTGTGGGTTTGGGGCCGAAGCATCAACAAGCAGAGGCACAGCCACAGCGACAGCCAGACCACAGTGAGCCACTGAACCACGTGACTCGCCGAGCCCCCCAAATGGACTCCGACAAGGAAATGTCAGCTCCTGTTATGGAGGGAAATGATGCAGTCACCGGTCACATTATTTCAACAACAATAGGTGGTAAAAATGGCGAACCCAAGCGGACGATCAGTTATATGGCAGAACGTGTTGTAGGTACTGGATCATTTGGAATCGTTTTTCAGGCTAAATGTATTGAAACTGGAGAAACGGTGGCTATAAAGAAGGTCTTACAGGACAGGAGGTATAAAAATCGTGAGTTGCAGTTGATGCGCTTGATGGATCATCCAAATGTTGTTTCACTGAAGCATTGTTTCTTCTCTACAACGACTAAGGATGAGCTTTTCCTGAATTTGGTTATGGAGTATGTACCCGAGACTATGCAGAGAGTTCTGAAGCACTACAGTAGTATGAACCAAAGGATGCCACTCCTCTATGTGAAACTTTATACATATCAAATTTTTAGGGGCCTGGCTTATATCCATGCTGTTCCTGGGGTATGCCACAGAGATGTGAAGCCTCAAAATCTTTTGGTTGATCCCCTTACGCACCAAGTTAAGCTTTGTGACTTTGGAAGTGCAAAAGTTCTGGTCAAGGGGGAAGCAAACATATCATACATATGTACTCGTTACTATCGGGCTCCTGAACTTATCTTTGGTGCGACAGAATATACATCATCCATTGACATCTGGTCAGCTGGTTGTGTCCTGGCTGAGCTCCTTCTAGGCCAGCCACTATTTCCAGGAGAGAATGCAGTGGACCAACTTGTGGAGATTATCAAGGTTCTTGGCACTCCAACTAGAGAAGAGATTCGATGCATGAATCCGAATTACACAGATTTTAGGTTCCCTCAGATCAAAGCTCATCCTTGGCATAAGGTTTTCCACAAGAGAATGCCGCCAGAAGCAATTGACCTTGCTTCACGACTACTTCAATATTCACCGAGTCTACGCTGCACTGCGCTAGAGGCATGCACGCATCCTTTCTTTGACGATCTTCGTGAGCCCAATGCTCGCCTACCAAATGGTCGCCCATTGCCGCCACTTTTCAACTTCAAACAAGAATTAAACGGAGTGTCACCAGAACTGATCAAAAGGCTCATACCAGAGCATGTGCGGCAGCAGGCTGGACTTGGATTCCCACACCCAGTCGGTACTTAA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

417

Amino Acids

47.06

Weight (kDa)

8.74

Isoelectric Point (pI)

46.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 77 - 360 3.3e-62 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 79 - 280 1.2e-24 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 859
AccI GTMKAC 1 cut(s) 1039
AciI CCGC 4 cut(s) 214, 989, 1130, 1207
AclWI GGATC 3 cut(s) 262, 381, 623
AcsI RAATTY 2 cut(s) 442, 549
AcuI CTGAAG 2 cut(s) 416, 506
AcvI CACGTG 1 cut(s) 88
AfaI GTAC 4 cut(s) 250, 462, 715, 1246
AfiI CCNNNNNNNGG 3 cut(s) 109, 445, 859
AflIII ACRYGT 1 cut(s) 238
AgeI ACCGGT 1 cut(s) 164
AgsI TTSAA 5 cut(s) 180, 290, 1025, 1141, 1147
AhdI GACNNNNNGTC 1 cut(s) 781
AjnI CCWGG 4 cut(s) 561, 583, 798, 832
AjuI GAANNNNNNNTTGG 4 cut(s) 373, 405, 729, 761
AluBI AGCT 6 cut(s) 134, 433, 652, 788, 808, 953
AluI AGCT 6 cut(s) 134, 433, 652, 788, 808, 953
Alw21I GWGCWC 1 cut(s) 810
Alw26I GTCTC 1 cut(s) 461
AlwI GGATC 3 cut(s) 262, 381, 623
AlwNI CAGNNNCTG 1 cut(s) 137
Ama87I CYCGRG 1 cut(s) 464
AoxI GGCC 4 cut(s) 3, 20, 559, 817
ApeKI GCWGC 2 cut(s) 1044, 1210
ApoI RAATTY 2 cut(s) 442, 549
AsiGI ACCGGT 1 cut(s) 164
Asp700I GAANNNNTTC 1 cut(s) 900
AspLEI GCGC 2 cut(s) 366, 1054
AspS9I GGNCC 3 cut(s) 20, 559, 850
AsuHPI GGTGA 3 cut(s) 154, 1023, 1161
AvaI CYCGRG 1 cut(s) 464
AvaII GGWCC 1 cut(s) 850
BanII GRGCYC 4 cut(s) 103, 733, 810, 1098
BbrPI CACGTG 1 cut(s) 88
Bbv12I GWGCWC 1 cut(s) 810
BbvI GCAGC 2 cut(s) 1031, 1222
BccI CCATC 1 cut(s) 364
BciT130I CCWGG 4 cut(s) 563, 585, 800, 834
BclI TGATCA 1 cut(s) 1179
BcoDI GTCTC 1 cut(s) 461
BfaI CTAG 3 cut(s) 815, 891, 1055
BfmI CTRYAG 1 cut(s) 493
BisI GCNGC 5 cut(s) 989, 1045, 1130, 1208, 1211
BlpI GCTNAGC 1 cut(s) 804
BlsI GCNGC 5 cut(s) 990, 1046, 1131, 1209, 1212
Bme1390I CCNGG 4 cut(s) 563, 585, 800, 834
Bme18I GGWCC 1 cut(s) 850
BmeRI GACNNNNNGTC 1 cut(s) 781
BmeT110I CYCGRG 1 cut(s) 464
BmgT120I GGNCC 3 cut(s) 20, 559, 850
BmiI GGNNCC 4 cut(s) 21, 560, 732, 938
BmrFI CCNGG 4 cut(s) 563, 585, 800, 834
BmrI ACTGGG 1 cut(s) 1232
BmsI GCATC 6 cut(s) 37, 145, 351, 504, 896, 1078
BmuI ACTGGG 1 cut(s) 1232
BpmI CTGGAG 1 cut(s) 315
Bpu1102I GCTNAGC 1 cut(s) 804
BsaAI YACGTR 1 cut(s) 88
BsaJI CCNNGG 2 cut(s) 584, 959
BsaWI WCCGGW 1 cut(s) 164
BsaXI ACNNNNNCTCC 2 cut(s) 288, 318
Bsc4I CCNNNNNNNGG 3 cut(s) 109, 445, 859
Bse118I RCCGGY 1 cut(s) 164
Bse1I ACTGG 3 cut(s) 256, 298, 1238
Bse3DI GCAATG 1 cut(s) 1124
BseBI CCWGG 4 cut(s) 563, 585, 800, 834
BseDI CCNNGG 2 cut(s) 584, 959
BseGI GGATG 6 cut(s) 376, 433, 519, 767, 955, 1069
BseLI CCNNNNNNNGG 3 cut(s) 109, 445, 859
BseMI GCAATG 1 cut(s) 1124
BseMII CTCAG 2 cut(s) 795, 956
BseNI ACTGG 3 cut(s) 256, 298, 1238
BseRI GAGGAG 1 cut(s) 512
BseXI GCAGC 2 cut(s) 1031, 1222
BsgI GTGCAG 1 cut(s) 1030
BshFI GGCC 4 cut(s) 5, 22, 561, 819
BshTI ACCGGT 1 cut(s) 164
BsiHKAI GWGCWC 1 cut(s) 810
BsiHKCI CYCGRG 1 cut(s) 464
BsiSI CCGG 1 cut(s) 165
BslI CCNNNNNNNGG 3 cut(s) 109, 445, 859
BsmAI GTCTC 1 cut(s) 461
BsmI GAATGC 2 cut(s) 847, 990
BsnI GGCC 4 cut(s) 5, 22, 561, 819
BsoBI CYCGRG 1 cut(s) 464
Bsp1286I GDGCHC 4 cut(s) 103, 733, 810, 1098
Bsp143I GATC 7 cut(s) 219, 254, 373, 628, 945, 1084, 1179
Bsp1720I GCTNAGC 1 cut(s) 804
BspACI CCGC 4 cut(s) 214, 989, 1130, 1207
BspANI GGCC 4 cut(s) 5, 22, 561, 819
BspCNI CTCAG 2 cut(s) 796, 955
BspLI GGNNCC 4 cut(s) 21, 560, 732, 938
BspPI GGATC 3 cut(s) 262, 381, 623
BsrDI GCAATG 1 cut(s) 1124
BsrFI RCCGGY 1 cut(s) 164
BsrI ACTGG 3 cut(s) 256, 298, 1238
BssAI RCCGGY 1 cut(s) 164
BssECI CCNNGG 2 cut(s) 584, 959
BssMI GATC 7 cut(s) 219, 254, 373, 628, 945, 1084, 1179
BssT1I CCWWGG 1 cut(s) 959
Bst2UI CCWGG 4 cut(s) 563, 585, 800, 834
Bst4CI ACNGT 3 cut(s) 71, 304, 497
Bst6I CTCTTC 1 cut(s) 891
BstAPI GCANNNNNTGC 1 cut(s) 361
BstBAI YACGTR 1 cut(s) 88
BstC8I GCNNGC 5 cut(s) 821, 1063, 1067, 1105, 1215
BstDEI CTNAG 3 cut(s) 423, 804, 942
BstF5I GGATG 6 cut(s) 376, 433, 519, 767, 955, 1069
BstHHI GCGC 2 cut(s) 366, 1054
BstKTI GATC 7 cut(s) 222, 257, 376, 631, 948, 1087, 1182
BstMAI GTCTC 1 cut(s) 461
BstMBI GATC 7 cut(s) 219, 254, 373, 628, 945, 1084, 1179
BstMWI GCNNNNNNNGC 3 cut(s) 361, 1058, 1207
BstNI CCWGG 4 cut(s) 563, 585, 800, 834
BstNSI RCATGY 2 cut(s) 1065, 1205
BstSCI CCNGG 4 cut(s) 561, 583, 798, 832
BstSFI CTRYAG 1 cut(s) 493
BstV1I GCAGC 2 cut(s) 1031, 1222
BsuRI GGCC 4 cut(s) 5, 22, 561, 819
BtsCI GGATG 6 cut(s) 376, 433, 519, 767, 955, 1069
BtsI GCAGTG 2 cut(s) 852, 1047
BtsIMutI CAGTG 5 cut(s) 76, 77, 392, 852, 1047
Cac8I GCNNGC 5 cut(s) 821, 1063, 1067, 1105, 1215
CaiI CAGNNNCTG 1 cut(s) 137
CfoI GCGC 2 cut(s) 366, 1054
Cfr10I RCCGGY 1 cut(s) 164
Cfr13I GGNCC 3 cut(s) 20, 559, 850
Csp6I GTAC 4 cut(s) 249, 461, 714, 1245
CspAI ACCGGT 1 cut(s) 164
CviAII CATG 4 cut(s) 575, 910, 1062, 1202
CviQI GTAC 4 cut(s) 249, 461, 714, 1245
DdeI CTNAG 3 cut(s) 423, 804, 942
DpnI GATC 7 cut(s) 221, 256, 375, 630, 947, 1086, 1181
DpnII GATC 7 cut(s) 219, 254, 373, 628, 945, 1084, 1179
DriI GACNNNNNGTC 1 cut(s) 781
Eam1104I CTCTTC 1 cut(s) 891
Eam1105I GACNNNNNGTC 1 cut(s) 781
EarI CTCTTC 1 cut(s) 891
Ecl136II GAGCTC 1 cut(s) 808
Eco130I CCWWGG 1 cut(s) 959
Eco24I GRGCYC 4 cut(s) 103, 733, 810, 1098
Eco47I GGWCC 1 cut(s) 850
Eco53kI GAGCTC 1 cut(s) 808
Eco57I CTGAAG 2 cut(s) 416, 506
Eco72I CACGTG 1 cut(s) 88
Eco88I CYCGRG 1 cut(s) 464
EcoICRI GAGCTC 1 cut(s) 808
EcoO109I RGGNCCY 1 cut(s) 559
EcoRII CCWGG 4 cut(s) 561, 583, 798, 832
EcoT14I CCWWGG 1 cut(s) 959
EcoT22I ATGCAT 1 cut(s) 911
EcoT38I GRGCYC 4 cut(s) 103, 733, 810, 1098
ErhI CCWWGG 1 cut(s) 959
FaeI CATG 4 cut(s) 578, 913, 1065, 1205
FalI AAGNNNNNCTT 4 cut(s) 305, 337, 636, 668
FatI CATG 4 cut(s) 574, 909, 1061, 1201
FauNDI CATATG 1 cut(s) 710
FbaI TGATCA 1 cut(s) 1179
FblI GTMKAC 1 cut(s) 1039
Fnu4HI GCNGC 5 cut(s) 989, 1045, 1130, 1208, 1211
FokI GGATG 6 cut(s) 363, 440, 526, 754, 942, 1056
FriOI GRGCYC 4 cut(s) 103, 733, 810, 1098
Fsp4HI GCNGC 5 cut(s) 989, 1045, 1130, 1208, 1211
FspBI CTAG 3 cut(s) 815, 891, 1055
GlaI GCGC 2 cut(s) 365, 1053
GluI GCNGC 5 cut(s) 989, 1045, 1130, 1208, 1211
GsuI CTGGAG 1 cut(s) 315
HaeIII GGCC 4 cut(s) 5, 22, 561, 819
HapII CCGG 1 cut(s) 165
HhaI GCGC 2 cut(s) 366, 1054
Hin1II CATG 4 cut(s) 578, 913, 1065, 1205
Hin6I GCGC 2 cut(s) 364, 1052
HinP1I GCGC 2 cut(s) 364, 1052
HindIII AAGCTT 1 cut(s) 650
HinfI GANTC 7 cut(s) 91, 113, 264, 901, 913, 1036, 1227
HpaII CCGG 1 cut(s) 165
HphI GGTGA 3 cut(s) 154, 1023, 1161
Hpy166II GTNNAC 2 cut(s) 850, 1040
Hpy188I TCNGA 4 cut(s) 118, 486, 918, 945
Hpy188III TCNNGA 5 cut(s) 347, 439, 734, 1014, 1091
Hpy8I GTNNAC 2 cut(s) 850, 1040
HpyAV CCTTC 2 cut(s) 310, 821
HpyCH4III ACNGT 3 cut(s) 71, 304, 497
HpyCH4IV ACGT 2 cut(s) 87, 238
HpyCH4V TGCA 8 cut(s) 158, 355, 475, 671, 845, 909, 1047, 1065
HpyF10VI GCNNNNNNNGC 3 cut(s) 361, 1058, 1207
HpyF3I CTNAG 3 cut(s) 423, 804, 942
HpySE526I ACGT 2 cut(s) 87, 238
Hsp92II CATG 4 cut(s) 578, 913, 1065, 1205
HspAI GCGC 2 cut(s) 364, 1052
Ksp22I TGATCA 1 cut(s) 1179
Kzo9I GATC 7 cut(s) 219, 254, 373, 628, 945, 1084, 1179
LmnI GCTCC 3 cut(s) 139, 736, 813
Lsp1109I GCAGC 2 cut(s) 1031, 1222
LweI GCATC 6 cut(s) 37, 145, 351, 504, 896, 1078
MaeI CTAG 3 cut(s) 815, 891, 1055
MaeII ACGT 2 cut(s) 87, 238
MaeIII GTNAC 6 cut(s) 88, 160, 167, 656, 719, 1167
MalI GATC 7 cut(s) 221, 256, 375, 630, 947, 1086, 1181
MboI GATC 7 cut(s) 219, 254, 373, 628, 945, 1084, 1179
MboII GAAGA 3 cut(s) 400, 908, 1079
MfeI CAATTG 1 cut(s) 999
MhlI GDGCHC 4 cut(s) 103, 733, 810, 1098
MluCI AATT 5 cut(s) 442, 549, 919, 999, 1154
MlyI GAGTC 3 cut(s) 85, 107, 1045
MmeI TCCRAC 2 cut(s) 141, 911
MnlI CCTC 8 cut(s) 16, 34, 139, 327, 533, 621, 951, 1051
Mph1103I ATGCAT 1 cut(s) 911
MroXI GAANNNNTTC 1 cut(s) 900
MseI TTAA 3 cut(s) 648, 1157, 1249
MslI CAYNNNNRTG 3 cut(s) 381, 600, 709
MspA1I CMGCKG 1 cut(s) 788
MspI CCGG 1 cut(s) 165
MspR9I CCNGG 4 cut(s) 563, 585, 800, 834
MunI CAATTG 1 cut(s) 999
Mva1269I GAATGC 2 cut(s) 847, 990
MvaI CCWGG 4 cut(s) 563, 585, 800, 834
MwoI GCNNNNNNNGC 3 cut(s) 361, 1058, 1207
NdeI CATATG 1 cut(s) 710
NdeII GATC 7 cut(s) 219, 254, 373, 628, 945, 1084, 1179
NlaIII CATG 4 cut(s) 578, 913, 1065, 1205
NlaIV GGNNCC 4 cut(s) 21, 560, 732, 938
NmeAIII GCCGAG 1 cut(s) 122
NmuCI GTSAC 5 cut(s) 88, 160, 167, 656, 1167
NsiI ATGCAT 1 cut(s) 911
NspI RCATGY 2 cut(s) 1065, 1205
PaeI GCATGC 1 cut(s) 1065
PctI GAATGC 2 cut(s) 847, 990
PdmI GAANNNNTTC 1 cut(s) 900
PfeI GAWTC 4 cut(s) 264, 901, 913, 1227
PflMI CCANNNNNTGG 1 cut(s) 859
PfoI TCCNGGA 1 cut(s) 832
PinAI ACCGGT 1 cut(s) 164
PkrI GCNGC 5 cut(s) 990, 1046, 1131, 1209, 1212
PleI GAGTC 3 cut(s) 85, 107, 1044
PmaCI CACGTG 1 cut(s) 88
PmlI CACGTG 1 cut(s) 88
PpsI GAGTC 3 cut(s) 85, 107, 1044
Ppu21I YACGTR 1 cut(s) 88
Psp124BI GAGCTC 1 cut(s) 810
Psp6I CCWGG 4 cut(s) 561, 583, 798, 832
PspCI CACGTG 1 cut(s) 88
PspGI CCWGG 4 cut(s) 561, 583, 798, 832
PspN4I GGNNCC 4 cut(s) 21, 560, 732, 938
PspPI GGNCC 3 cut(s) 20, 559, 850
PstNI CAGNNNCTG 1 cut(s) 137
PvuII CAGCTG 1 cut(s) 788
RsaI GTAC 4 cut(s) 250, 462, 715, 1246
RsaNI GTAC 4 cut(s) 249, 461, 714, 1245
RseI CAYNNNNRTG 3 cut(s) 381, 600, 709
SacI GAGCTC 1 cut(s) 810
SaqAI TTAA 3 cut(s) 648, 1157, 1249
SatI GCNGC 5 cut(s) 989, 1045, 1130, 1208, 1211
Sau3AI GATC 7 cut(s) 219, 254, 373, 628, 945, 1084, 1179
Sau96I GGNCC 3 cut(s) 20, 559, 850
SchI GAGTC 3 cut(s) 85, 107, 1045
ScrFI CCNGG 4 cut(s) 563, 585, 800, 834
SduI GDGCHC 4 cut(s) 103, 733, 810, 1098
SfaNI GCATC 6 cut(s) 37, 145, 351, 504, 896, 1078
SfcI CTRYAG 1 cut(s) 493
SinI GGWCC 1 cut(s) 850
SmiMI CAYNNNNRTG 3 cut(s) 381, 600, 709
SphI GCATGC 1 cut(s) 1065
Sse9I AATT 5 cut(s) 442, 549, 919, 999, 1154
SsiI CCGC 4 cut(s) 214, 989, 1130, 1207
SspI AATATT 1 cut(s) 1028
SspMI CTAG 3 cut(s) 815, 891, 1055
SstI GAGCTC 1 cut(s) 810
StyD4I CCNGG 4 cut(s) 561, 583, 798, 832
StyI CCWWGG 1 cut(s) 959
TaaI ACNGT 3 cut(s) 71, 304, 497
TaiI ACGT 2 cut(s) 90, 241
TaqI TCGA 1 cut(s) 904
TasI AATT 5 cut(s) 442, 549, 919, 999, 1154
TatI WGTACW 1 cut(s) 713
TauI GCSGC 3 cut(s) 991, 1132, 1210
TfiI GAWTC 4 cut(s) 264, 901, 913, 1227
Tru1I TTAA 3 cut(s) 648, 1157, 1249
Tru9I TTAA 3 cut(s) 648, 1157, 1249
TscAI CASTG 5 cut(s) 76, 84, 399, 852, 1054
TseFI GTSAC 5 cut(s) 88, 160, 167, 656, 1167
TseI GCWGC 2 cut(s) 1044, 1210
Tsp45I GTSAC 5 cut(s) 88, 160, 167, 656, 1167
TspDTI ATGAA 2 cut(s) 518, 926
TspGWI ACGGA 1 cut(s) 1176
TspRI CASTG 5 cut(s) 76, 84, 399, 852, 1054
Van91I CCANNNNNTGG 1 cut(s) 859
VpaK11BI GGWCC 1 cut(s) 850
XapI RAATTY 2 cut(s) 442, 549
XceI RCATGY 2 cut(s) 1065, 1205
XcmI CCANNNNNNNNNTGG 1 cut(s) 581
XmiI GTMKAC 1 cut(s) 1039
XmnI GAANNNNTTC 1 cut(s) 900
XspI CTAG 3 cut(s) 815, 891, 1055
Zsp2I ATGCAT 1 cut(s) 911
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.