RLG00000019135
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0006440
Physical Location & Seq
Forward (+)
47148431 .. 47155268
6838 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019135

Sequence Viewer

Length: 1587 bp
ATGGGCTCTTTGGGTTTGGGGCCAAAGCATCACCAAGCAGAGGCACAACCACAGCGACAAGCAGACCACAATGAGCCACTGAACCACGTGACTCGCCCCGCCTCCGATATGGACACCCAGAAGGAAATGTCAGCTCCTGTTATTGAGGGAAATGATGCAGTCACTGGTCACATCATTTCCACGACCATTGGTGGGAAAAATGGCGAACCCAAACGGACAATTAGTTATATGGCAGAGCGTGCTGTAGGTACTGGATCATTTGGAATCGTATTTCAGGCAAAATGTTTAGAAACCGGAGAAACGGTGGCCATAAAGAAGGTGTTGCAGGACAGGAGATATAAAAATCGAGAGTTGCAGTTGATGCGTTTGATGGATCACCCTAATGTTGTTTCCCTGAAGCATTGTTTCTTCTCTACAACGACTAAAGATGAGCTTTTCCTGAATTTGGTTATGGAATATGTACCCGAGACTATGTACAGGGTTCTGAAGCACTACAGTAGTATGAACCAGAGGATGCCACTCATCTATGTGAAACTTTATACATATCAAATCTTTAGGGGCCTTGCTTATATCCATGCTGTTCCTGGGGTTTGCCATAGAGATGTGAAGCCTCAAAATCTTTTGGTTGATCCCCTCACCCATCAGGTTAAGATTTGCGATTTTGGAAGTGCAAAAGTATTGGTCAGGGGTGAAGCAAACATTTCCTACATATGTTCTCGCTACTATCGGGCTCCTGAGCTCATCTTTGGTGCAACGGAATATACAACATCCATCGATATCTGGTCAGCTGGTTGTGTCCTTGCTGAGCTCCTTCTAGGCCAGCCGTTGTTTCCAGGAGAGAATGCAGTGGATCAACTTGTAGAGATTATCAAGGTTCTTGGTACTCCAACCAGAGAAGAAATTCGATGCATGAATCCAAACTATACCGATTTTAGGTTCCCTCAGATCAAAGCTCATCCTTGGCATAAGGTTTTCCATAAACGAATGCCACCAGAAGCAATTGACCTTGCTTCACGGCTCCTTCAATATTCACCAAGTCTACGCTGCACTGCGCTTGAAGCATGCACACATCCTTTTTTTGACGAACTTCGTGAGCCTAATGCACGCCTTCCAAATGGCCGCCCTTTGCCGCCTCTTTTCAACTTCAAACAAGAATTAAATGGAGCATCACCTGAACTGATCAGCAGGCTCATACCAGAGCATATGCGGCAGCAGGTTGGTCTTGGATTCCCACACCCAGCAGGGGTCAGAGCAAGCACCATTGATGCAATTGATCAGAATCTTGGAACTACCTTGATATTTTTGAAGCGAGAGCTTGAAGCTTTGAAGAGAGCAAGAGTTTCTACTAGTAAGACATTAGAAGAATCCAGGTGTTTGGAGCCAGCAAGGAGGCAATTGCCATTAGAATCATGTCTTGGAGTTGCTGGAATTTTCCTTCATAAAGGAAAGGTGGCTCTACACTCAGAGCTACTAGGGGATCCTGATGAAGCCTACTCTCAGCTTATACACTTGCAAGGGTTAAGTGAACACTCAGAACAAGCCGCAGACAATCAAAGAAAGTCAGAATTTAGTAAAGATTTTTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010646 GO:0010648 GO:0014070 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023051 GO:0023052 GO:0023057 GO:0032870 GO:0032879 GO:0032880 GO:0032991 GO:0033993 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048519 GO:0048523 GO:0048545 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0061695 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0140096 GO:1900457 GO:1900458 GO:1901564 GO:1901700 GO:1901701 GO:1902494 GO:1902911 GO:1990234
KEGG Pathways
Metabolic & Signaling
ko01521 ko04012 ko04062 ko04075 ko04110 ko04150 ko04151 ko04310 ko04340 ko04341 ko04360 ko04390 ko04510 ko04550 ko04657 ko04660 ko04662 ko04711 ko04722 ko04728 ko04910 ko04916 ko04917 ko04919 ko04931 ko04932 ko04934 ko05010 ko05160 ko05162 ko05164 ko05165 ko05166 ko05167 ko05169 ko05200 ko05210 ko05213 ko05215 ko05217 ko05224 ko05225 ko05226 map01521 map04012 map04062 map04075 map04110 map04150 map04151 map04310 map04340 map04341 map04360 map04390 map04510 map04550 map04657 map04660 map04662 map04711 map04722 map04728 map04910 map04916 map04917 map04919 map04931 map04932 map04934 map05010 map05160 map05162 map05164 map05165 map05166 map05167 map05169 map05200 map05210 map05213 map05215 map05217 map05224 map05225 map05226
Pfam Domains
Protein Families
Pkinase

Protein Analysis

529

Amino Acids

59.51

Weight (kDa)

7.97

Isoelectric Point (pI)

44.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 77 - 360 2.9e-61 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 79 - 280 1.4e-24 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1204
AccI GTMKAC 1 cut(s) 1039
AciI CCGC 5 cut(s) 99, 1120, 1130, 1207, 1542
AclWI GGATC 6 cut(s) 262, 381, 623, 858, 1472, 1485
AcoI YGGCCR 2 cut(s) 306, 1117
AcsI RAATTY 4 cut(s) 442, 900, 1428, 1565
AcuI CTGAAG 2 cut(s) 416, 506
AcvI CACGTG 1 cut(s) 88
AfaI GTAC 4 cut(s) 250, 462, 476, 883
AfiI CCNNNNNNNGG 5 cut(s) 40, 192, 445, 933, 1243
AgsI TTSAA 7 cut(s) 1025, 1058, 1141, 1147, 1306, 1319, 1327
AhlI ACTAGT 1 cut(s) 1346
AjnI CCWGG 3 cut(s) 583, 832, 1367
AjuI GAANNNNNNNTTGG 2 cut(s) 1398, 1430
Alw21I GWGCWC 2 cut(s) 741, 810
Alw26I GTCTC 1 cut(s) 461
AlwI GGATC 6 cut(s) 262, 381, 623, 858, 1472, 1485
AlwNI CAGNNNCTG 2 cut(s) 137, 164
Ama87I CYCGRG 1 cut(s) 464
AoxI GGCC 5 cut(s) 20, 306, 559, 817, 1117
ApeKI GCWGC 2 cut(s) 1044, 1210
ApoI RAATTY 4 cut(s) 442, 900, 1428, 1565
Asp700I GAANNNNTTC 1 cut(s) 900
AspLEI GCGC 1 cut(s) 1054
AspS9I GGNCC 2 cut(s) 20, 559
AsuHPI GGTGA 6 cut(s) 23, 368, 628, 701, 1023, 1161
AvaI CYCGRG 1 cut(s) 464
BalI TGGCCA 1 cut(s) 308
BamHI GGATCC 1 cut(s) 1477
BanII GRGCYC 4 cut(s) 8, 733, 741, 810
BbrPI CACGTG 1 cut(s) 88
Bbv12I GWGCWC 2 cut(s) 741, 810
BbvI GCAGC 2 cut(s) 1031, 1222
BccI CCATC 3 cut(s) 364, 648, 779
BceAI ACGGC 2 cut(s) 808, 1031
BciT130I CCWGG 3 cut(s) 585, 834, 1369
BclI TGATCA 2 cut(s) 1179, 1273
BcoDI GTCTC 1 cut(s) 461
BcuI ACTAGT 1 cut(s) 1346
BfaI CTAG 3 cut(s) 815, 1347, 1472
BfmI CTRYAG 2 cut(s) 243, 493
BfuAI ACCTGC 1 cut(s) 1204
BisI GCNGC 6 cut(s) 1045, 1120, 1130, 1208, 1211, 1542
BlpI GCTNAGC 1 cut(s) 804
BlsI GCNGC 6 cut(s) 1046, 1121, 1131, 1209, 1212, 1543
Bme1390I CCNGG 3 cut(s) 585, 834, 1369
BmeT110I CYCGRG 1 cut(s) 464
BmgT120I GGNCC 2 cut(s) 20, 559
BmiI GGNNCC 7 cut(s) 21, 560, 732, 938, 1019, 1380, 1479
BmrFI CCNGG 3 cut(s) 585, 834, 1369
BmsI GCATC 7 cut(s) 37, 145, 351, 504, 896, 1175, 1255
Bpu10I CCTNAGC 1 cut(s) 735
Bpu1102I GCTNAGC 1 cut(s) 804
Bsa29I ATCGAT 1 cut(s) 774
BsaAI YACGTR 1 cut(s) 88
BsaBI GATNNNNATC 1 cut(s) 1278
BsaJI CCNNGG 2 cut(s) 584, 959
BsaWI WCCGGW 1 cut(s) 293
BsaXI ACNNNNNCTCC 2 cut(s) 288, 318
Bsc4I CCNNNNNNNGG 5 cut(s) 40, 192, 445, 933, 1243
Bse1I ACTGG 2 cut(s) 169, 256
Bse8I GATNNNNATC 1 cut(s) 1278
BseBI CCWGG 3 cut(s) 585, 834, 1369
BseCI ATCGAT 1 cut(s) 774
BseDI CCNNGG 2 cut(s) 584, 959
BseGI GGATG 4 cut(s) 519, 767, 955, 1069
BseJI GATNNNNATC 1 cut(s) 1278
BseLI CCNNNNNNNGG 5 cut(s) 40, 192, 445, 933, 1243
BseMII CTCAG 6 cut(s) 726, 795, 956, 1476, 1511, 1545
BseNI ACTGG 2 cut(s) 169, 256
BseXI GCAGC 2 cut(s) 1031, 1222
BseYI CCCAGC 1 cut(s) 1237
BsgI GTGCAG 1 cut(s) 1030
BshFI GGCC 5 cut(s) 22, 308, 561, 819, 1119
BshVI ATCGAT 1 cut(s) 774
BsiHKAI GWGCWC 2 cut(s) 741, 810
BsiHKCI CYCGRG 1 cut(s) 464
BsiSI CCGG 1 cut(s) 294
BslI CCNNNNNNNGG 5 cut(s) 40, 192, 445, 933, 1243
BsmAI GTCTC 1 cut(s) 461
BsmI GAATGC 2 cut(s) 847, 990
BsnI GGCC 5 cut(s) 22, 308, 561, 819, 1119
BsoBI CYCGRG 1 cut(s) 464
Bsp1286I GDGCHC 4 cut(s) 8, 733, 741, 810
Bsp1407I TGTACA 1 cut(s) 474
Bsp143I GATC 8 cut(s) 254, 373, 628, 850, 945, 1179, 1273, 1477
Bsp1720I GCTNAGC 1 cut(s) 804
BspACI CCGC 5 cut(s) 99, 1120, 1130, 1207, 1542
BspANI GGCC 5 cut(s) 22, 308, 561, 819, 1119
BspCNI CTCAG 6 cut(s) 727, 796, 955, 1475, 1510, 1544
BspDI ATCGAT 1 cut(s) 774
BspLI GGNNCC 7 cut(s) 21, 560, 732, 938, 1019, 1380, 1479
BspMI ACCTGC 1 cut(s) 1204
BspPI GGATC 6 cut(s) 262, 381, 623, 858, 1472, 1485
BsrGI TGTACA 1 cut(s) 474
BsrI ACTGG 2 cut(s) 169, 256
BssECI CCNNGG 2 cut(s) 584, 959
BssMI GATC 8 cut(s) 254, 373, 628, 850, 945, 1179, 1273, 1477
BssT1I CCWWGG 1 cut(s) 959
Bst2UI CCWGG 3 cut(s) 585, 834, 1369
Bst4CI ACNGT 2 cut(s) 304, 497
Bst6I CTCTTC 1 cut(s) 1322
BstAPI GCANNNNNTGC 2 cut(s) 239, 361
BstAUI TGTACA 1 cut(s) 474
BstBAI YACGTR 1 cut(s) 88
BstC8I GCNNGC 7 cut(s) 240, 821, 1063, 1105, 1187, 1255, 1383
BstDEI CTNAG 6 cut(s) 735, 804, 942, 1462, 1497, 1531
BstF5I GGATG 4 cut(s) 519, 767, 955, 1069
BstHHI GCGC 1 cut(s) 1054
BstKTI GATC 8 cut(s) 257, 376, 631, 853, 948, 1182, 1276, 1480
BstMAI GTCTC 1 cut(s) 461
BstMBI GATC 8 cut(s) 254, 373, 628, 850, 945, 1179, 1273, 1477
BstMWI GCNNNNNNNGC 4 cut(s) 239, 361, 1058, 1207
BstNI CCWGG 3 cut(s) 585, 834, 1369
BstNSI RCATGY 1 cut(s) 1065
BstSCI CCNGG 3 cut(s) 583, 832, 1367
BstSFI CTRYAG 2 cut(s) 243, 493
BstV1I GCAGC 2 cut(s) 1031, 1222
BstX2I RGATCY 1 cut(s) 1477
BstXI CCANNNNNNTGG 1 cut(s) 1375
BstYI RGATCY 1 cut(s) 1477
Bsu15I ATCGAT 1 cut(s) 774
BsuRI GGCC 5 cut(s) 22, 308, 561, 819, 1119
BsuTUI ATCGAT 1 cut(s) 774
BtsCI GGATG 4 cut(s) 519, 767, 955, 1069
BtsI GCAGTG 2 cut(s) 852, 1047
BtsIMutI CAGTG 4 cut(s) 77, 162, 852, 1047
BveI ACCTGC 1 cut(s) 1204
Cac8I GCNNGC 7 cut(s) 240, 821, 1063, 1105, 1187, 1255, 1383
CaiI CAGNNNCTG 2 cut(s) 137, 164
CfoI GCGC 1 cut(s) 1054
Cfr13I GGNCC 2 cut(s) 20, 559
ClaI ATCGAT 1 cut(s) 774
Csp6I GTAC 4 cut(s) 249, 461, 475, 882
CspCI CAANNNNNGTGG 2 cut(s) 169, 204
CviAII CATG 4 cut(s) 575, 910, 1062, 1410
CviQI GTAC 4 cut(s) 249, 461, 475, 882
DdeI CTNAG 6 cut(s) 735, 804, 942, 1462, 1497, 1531
DpnI GATC 8 cut(s) 256, 375, 630, 852, 947, 1181, 1275, 1479
DpnII GATC 8 cut(s) 254, 373, 628, 850, 945, 1179, 1273, 1477
EaeI YGGCCR 2 cut(s) 306, 1117
Eam1104I CTCTTC 1 cut(s) 1322
EarI CTCTTC 1 cut(s) 1322
Ecl136II GAGCTC 2 cut(s) 739, 808
Eco130I CCWWGG 1 cut(s) 959
Eco24I GRGCYC 4 cut(s) 8, 733, 741, 810
Eco32I GATATC 1 cut(s) 778
Eco53kI GAGCTC 2 cut(s) 739, 808
Eco57I CTGAAG 2 cut(s) 416, 506
Eco72I CACGTG 1 cut(s) 88
Eco88I CYCGRG 1 cut(s) 464
EcoICRI GAGCTC 2 cut(s) 739, 808
EcoO109I RGGNCCY 1 cut(s) 559
EcoRII CCWGG 3 cut(s) 583, 832, 1367
EcoRV GATATC 1 cut(s) 778
EcoT14I CCWWGG 1 cut(s) 959
EcoT22I ATGCAT 1 cut(s) 911
EcoT38I GRGCYC 4 cut(s) 8, 733, 741, 810
ErhI CCWWGG 1 cut(s) 959
FaeI CATG 4 cut(s) 578, 913, 1065, 1413
FalI AAGNNNNNCTT 2 cut(s) 417, 449
FatI CATG 4 cut(s) 574, 909, 1061, 1409
FauI CCCGC 1 cut(s) 106
FauNDI CATATG 2 cut(s) 710, 1203
FbaI TGATCA 2 cut(s) 1179, 1273
FblI GTMKAC 1 cut(s) 1039
Fnu4HI GCNGC 6 cut(s) 1045, 1120, 1130, 1208, 1211, 1542
FokI GGATG 4 cut(s) 526, 754, 942, 1056
FriOI GRGCYC 4 cut(s) 8, 733, 741, 810
Fsp4HI GCNGC 6 cut(s) 1045, 1120, 1130, 1208, 1211, 1542
FspBI CTAG 3 cut(s) 815, 1347, 1472
GlaI GCGC 1 cut(s) 1053
GluI GCNGC 6 cut(s) 1045, 1120, 1130, 1208, 1211, 1542
GsaI CCCAGC 1 cut(s) 1241
HaeIII GGCC 5 cut(s) 22, 308, 561, 819, 1119
HapII CCGG 1 cut(s) 294
HhaI GCGC 1 cut(s) 1054
Hin1II CATG 4 cut(s) 578, 913, 1065, 1413
Hin6I GCGC 1 cut(s) 1052
HinP1I GCGC 1 cut(s) 1052
HindIII AAGCTT 1 cut(s) 1320
HinfI GANTC 7 cut(s) 91, 264, 913, 1227, 1279, 1364, 1406
HpaII CCGG 1 cut(s) 294
HphI GGTGA 6 cut(s) 23, 368, 628, 701, 1023, 1161
Hpy166II GTNNAC 2 cut(s) 1040, 1526
Hpy188I TCNGA 8 cut(s) 106, 486, 945, 1250, 1278, 1465, 1534, 1564
Hpy188III TCNNGA 5 cut(s) 347, 439, 734, 1091, 1481
Hpy8I GTNNAC 2 cut(s) 1040, 1526
HpyAV CCTTC 6 cut(s) 115, 310, 821, 1031, 1118, 1445
HpyCH4III ACNGT 2 cut(s) 304, 497
HpyCH4IV ACGT 1 cut(s) 87
HpyF10VI GCNNNNNNNGC 4 cut(s) 239, 361, 1058, 1207
HpyF3I CTNAG 6 cut(s) 735, 804, 942, 1462, 1497, 1531
HpySE526I ACGT 1 cut(s) 87
Hsp92II CATG 4 cut(s) 578, 913, 1065, 1413
HspAI GCGC 1 cut(s) 1052
Ksp22I TGATCA 2 cut(s) 1179, 1273
Kzo9I GATC 8 cut(s) 254, 373, 628, 850, 945, 1179, 1273, 1477
LmnI GCTCC 6 cut(s) 139, 736, 813, 1023, 1163, 1378
Lsp1109I GCAGC 2 cut(s) 1031, 1222
LweI GCATC 7 cut(s) 37, 145, 351, 504, 896, 1175, 1255
MaeI CTAG 3 cut(s) 815, 1347, 1472
MaeII ACGT 1 cut(s) 87
MaeIII GTNAC 3 cut(s) 88, 160, 167
MalI GATC 8 cut(s) 256, 375, 630, 852, 947, 1181, 1275, 1479
MboI GATC 8 cut(s) 254, 373, 628, 850, 945, 1179, 1273, 1477
MboII GAAGA 4 cut(s) 400, 908, 1339, 1373
MfeI CAATTG 3 cut(s) 999, 1269, 1394
MflI RGATCY 1 cut(s) 1477
MhlI GDGCHC 4 cut(s) 8, 733, 741, 810
MlsI TGGCCA 1 cut(s) 308
MluCI AATT 9 cut(s) 219, 442, 900, 999, 1154, 1269, 1394, 1428, 1565
MluNI TGGCCA 1 cut(s) 308
MlyI GAGTC 1 cut(s) 85
MmeI TCCRAC 1 cut(s) 911
MnlI CCTC 9 cut(s) 34, 112, 139, 504, 621, 644, 951, 1143, 1383
Mox20I TGGCCA 1 cut(s) 308
Mph1103I ATGCAT 1 cut(s) 911
MroXI GAANNNNTTC 1 cut(s) 900
MscI TGGCCA 1 cut(s) 308
MseI TTAA 3 cut(s) 648, 1157, 1520
MslI CAYNNNNRTG 3 cut(s) 381, 527, 600
Msp20I TGGCCA 1 cut(s) 308
MspA1I CMGCKG 1 cut(s) 788
MspI CCGG 1 cut(s) 294
MspR9I CCNGG 3 cut(s) 585, 834, 1369
MunI CAATTG 3 cut(s) 999, 1269, 1394
Mva1269I GAATGC 2 cut(s) 847, 990
MvaI CCWGG 3 cut(s) 585, 834, 1369
MwoI GCNNNNNNNGC 4 cut(s) 239, 361, 1058, 1207
NdeI CATATG 2 cut(s) 710, 1203
NdeII GATC 8 cut(s) 254, 373, 628, 850, 945, 1179, 1273, 1477
NlaIII CATG 4 cut(s) 578, 913, 1065, 1413
NlaIV GGNNCC 7 cut(s) 21, 560, 732, 938, 1019, 1380, 1479
NmuCI GTSAC 3 cut(s) 88, 160, 167
NsiI ATGCAT 1 cut(s) 911
NspI RCATGY 1 cut(s) 1065
PaeI GCATGC 1 cut(s) 1065
PctI GAATGC 2 cut(s) 847, 990
PdmI GAANNNNTTC 1 cut(s) 900
PfeI GAWTC 6 cut(s) 264, 913, 1227, 1279, 1364, 1406
PfoI TCCNGGA 1 cut(s) 832
PkrI GCNGC 6 cut(s) 1046, 1121, 1131, 1209, 1212, 1543
PleI GAGTC 1 cut(s) 85
PmaCI CACGTG 1 cut(s) 88
PmlI CACGTG 1 cut(s) 88
PpsI GAGTC 1 cut(s) 85
Ppu21I YACGTR 1 cut(s) 88
Psp124BI GAGCTC 2 cut(s) 741, 810
Psp6I CCWGG 3 cut(s) 583, 832, 1367
PspCI CACGTG 1 cut(s) 88
PspFI CCCAGC 1 cut(s) 1237
PspGI CCWGG 3 cut(s) 583, 832, 1367
PspN4I GGNNCC 7 cut(s) 21, 560, 732, 938, 1019, 1380, 1479
PspPI GGNCC 2 cut(s) 20, 559
PstNI CAGNNNCTG 2 cut(s) 137, 164
PsuI RGATCY 1 cut(s) 1477
PvuII CAGCTG 1 cut(s) 788
RsaI GTAC 4 cut(s) 250, 462, 476, 883
RsaNI GTAC 4 cut(s) 249, 461, 475, 882
RseI CAYNNNNRTG 3 cut(s) 381, 527, 600
SacI GAGCTC 2 cut(s) 741, 810
SaqAI TTAA 3 cut(s) 648, 1157, 1520
SatI GCNGC 6 cut(s) 1045, 1120, 1130, 1208, 1211, 1542
Sau3AI GATC 8 cut(s) 254, 373, 628, 850, 945, 1179, 1273, 1477
Sau96I GGNCC 2 cut(s) 20, 559
SchI GAGTC 1 cut(s) 85
ScrFI CCNGG 3 cut(s) 585, 834, 1369
SduI GDGCHC 4 cut(s) 8, 733, 741, 810
SfaNI GCATC 7 cut(s) 37, 145, 351, 504, 896, 1175, 1255
SfcI CTRYAG 2 cut(s) 243, 493
SmiMI CAYNNNNRTG 3 cut(s) 381, 527, 600
SpeI ACTAGT 1 cut(s) 1346
SphI GCATGC 1 cut(s) 1065
Sse9I AATT 9 cut(s) 219, 442, 900, 999, 1154, 1269, 1394, 1428, 1565
SsiI CCGC 5 cut(s) 99, 1120, 1130, 1207, 1542
SspI AATATT 1 cut(s) 1028
SspMI CTAG 3 cut(s) 815, 1347, 1472
SstI GAGCTC 2 cut(s) 741, 810
StyD4I CCNGG 3 cut(s) 583, 832, 1367
StyI CCWWGG 1 cut(s) 959
TaaI ACNGT 2 cut(s) 304, 497
TaiI ACGT 1 cut(s) 90
TaqI TCGA 3 cut(s) 346, 774, 904
TasI AATT 9 cut(s) 219, 442, 900, 999, 1154, 1269, 1394, 1428, 1565
TatI WGTACW 1 cut(s) 474
TauI GCSGC 4 cut(s) 1122, 1132, 1210, 1544
TfiI GAWTC 6 cut(s) 264, 913, 1227, 1279, 1364, 1406
Tru1I TTAA 3 cut(s) 648, 1157, 1520
Tru9I TTAA 3 cut(s) 648, 1157, 1520
TscAI CASTG 4 cut(s) 84, 169, 852, 1054
TseFI GTSAC 3 cut(s) 88, 160, 167
TseI GCWGC 2 cut(s) 1044, 1210
Tsp45I GTSAC 3 cut(s) 88, 160, 167
TspDTI ATGAA 4 cut(s) 518, 926, 1427, 1500
TspGWI ACGGA 2 cut(s) 229, 770
TspRI CASTG 4 cut(s) 84, 169, 852, 1054
XapI RAATTY 4 cut(s) 442, 900, 1428, 1565
XceI RCATGY 1 cut(s) 1065
XcmI CCANNNNNNNNNTGG 1 cut(s) 581
XmiI GTMKAC 1 cut(s) 1039
XmnI GAANNNNTTC 1 cut(s) 900
XspI CTAG 3 cut(s) 815, 1347, 1472
Zsp2I ATGCAT 1 cut(s) 911
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.