Rh2DG369700
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
52480880 .. 52486304
5425 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG369700.1

Sequence Viewer

Length: 1251 bp
ATGGGCTCTTTGGGTTTGGGGCCAAAGCATCACCAAGCAGAGGCACAACCACAGCGACAAGCAGACCACAATGAGCCACTGAACCACGTGACTCGCCCCGCCTCCGATATGGACACCCAGAAGGAAATGTCGGCTCCTGTTATTGAGGGAAATGATGCAGTCACTGGTCACATCATTTCCACGACCATTGGTGGGAAAAATGGCGAACCCAAACGGACAATTAGTTATATGGCAGAGCGTGCTGTTGGTACTGGATCGTTTGGAATCGTATTTCAGGCAAAATGCTTAGAAACCGGAGAAACGGTGGCCATAAAGAAGGTGTTGCAGGACAGGAGATATAAAAATCGAGAGTTGCAGCTGATGCGTTTGATGGATCACCCAAATGTTGTTTCCCTGAAGCATTGTTTCTTCTCTACAACGACTAAAGATGAGCTTTTCCTGAATTTGGTCATGGAATATGTACCCGAGACTATGTACAGGGTTCTGAAGCACTACAGTAGTATGAACCATAGGATGCCACTCATCTATGTGAAACTTTATACATATCAAATCTTTAGGGGCCTTGCTTATATCCATGCCGTTCCCGGGGTTTGCCATAGAGATGTGAAACCTCAAAATCTTTTGGTTGATCCCCTCACCCATCAGGTTAAGATTTGCGACTTTGGAAGTGCAAAAGTATTGGTCAGGGGTGAAGCAAACATTTCCTACATATGTTCTCGCTACTATCGGGCTCCTGAGCTCATCTTTGGTGCAACGGAATATACAACATCCATCGATATCTGGTCAGCTGGTTGTGTCCTTGCTGAGCTCCTTCTAGGCCAGCCGTTGTTTCCAGGAGAGAATGCAGTGGATCAACTTGTAGAGATTATCAAGGTTCTTGGTACTCCAACCAGAGAAGAAATTCGATGCATGAATCCAAACTATACTGATTTTAGGTTCCCTCAGATCAAAGCTCATCCTTGGCATAAGGTTTTCCATAAACGAATGCCACCAGAAGCAATTGACCTTGCTTCACGGCTCCTTCAATATTCACCAAGTCTACGCTGCACTGCGCTTGAAGCATGCACACATTCTTTTTTTGACGAACTTCGTGAGCCTAATGCACGCCTTCCAAATGGCCGCCCTTTGCCGCCTCTTTTCAACTTCAAACAAGAATTAAATGGAGCATCACCTGAACTGATCAGCAGGCTCATACCAGAGCATATGCGGCAGCAGGTTGGTCTCGGATTCCCACACCCAGCAGGTACTTAA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

416

Amino Acids

47.01

Weight (kDa)

8.48

Isoelectric Point (pI)

42.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 77 - 360 5.6e-61 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 79 - 280 1e-24 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1204, 1232
AccI GTMKAC 1 cut(s) 1039
AciI CCGC 4 cut(s) 99, 1120, 1130, 1207
AclWI GGATC 4 cut(s) 262, 381, 623, 858
AcoI YGGCCR 2 cut(s) 306, 1117
AcsI RAATTY 2 cut(s) 442, 900
AcuI CTGAAG 2 cut(s) 416, 506
AcvI CACGTG 1 cut(s) 88
AfaI GTAC 5 cut(s) 250, 462, 476, 883, 1246
AfiI CCNNNNNNNGG 4 cut(s) 40, 192, 445, 585
AgsI TTSAA 4 cut(s) 1025, 1058, 1141, 1147
AjnI CCWGG 1 cut(s) 832
AjuI GAANNNNNNNTTGG 2 cut(s) 373, 405
AluBI AGCT 6 cut(s) 358, 433, 739, 788, 808, 953
AluI AGCT 6 cut(s) 358, 433, 739, 788, 808, 953
Alw21I GWGCWC 2 cut(s) 741, 810
Alw26I GTCTC 2 cut(s) 461, 1226
AlwI GGATC 4 cut(s) 262, 381, 623, 858
AlwNI CAGNNNCTG 1 cut(s) 164
Ama87I CYCGRG 2 cut(s) 464, 584
AoxI GGCC 5 cut(s) 20, 306, 559, 817, 1117
ApeKI GCWGC 3 cut(s) 355, 1044, 1210
ApoI RAATTY 2 cut(s) 442, 900
Asp700I GAANNNNTTC 1 cut(s) 900
AspLEI GCGC 1 cut(s) 1054
AspS9I GGNCC 2 cut(s) 20, 559
AsuC2I CCSGG 2 cut(s) 585, 586
AsuHPI GGTGA 6 cut(s) 23, 368, 628, 701, 1023, 1161
AvaI CYCGRG 2 cut(s) 464, 584
BalI TGGCCA 1 cut(s) 308
BanII GRGCYC 4 cut(s) 8, 733, 741, 810
BbrPI CACGTG 1 cut(s) 88
Bbv12I GWGCWC 2 cut(s) 741, 810
BbvI GCAGC 3 cut(s) 367, 1031, 1222
BccI CCATC 3 cut(s) 364, 648, 779
BceAI ACGGC 3 cut(s) 563, 808, 1031
BciT130I CCWGG 1 cut(s) 834
BclI TGATCA 1 cut(s) 1179
BcnI CCSGG 2 cut(s) 585, 586
BcoDI GTCTC 2 cut(s) 461, 1226
BfaI CTAG 1 cut(s) 815
BfmI CTRYAG 1 cut(s) 493
BfuAI ACCTGC 2 cut(s) 1204, 1232
BisI GCNGC 6 cut(s) 356, 1045, 1120, 1130, 1208, 1211
BlpI GCTNAGC 1 cut(s) 804
BlsI GCNGC 6 cut(s) 357, 1046, 1121, 1131, 1209, 1212
Bme1390I CCNGG 3 cut(s) 585, 586, 834
BmeT110I CYCGRG 2 cut(s) 464, 584
BmgT120I GGNCC 2 cut(s) 20, 559
BmiI GGNNCC 6 cut(s) 21, 135, 560, 732, 938, 1019
BmrFI CCNGG 3 cut(s) 585, 586, 834
BmsI GCATC 6 cut(s) 37, 145, 351, 504, 896, 1175
Bpu10I CCTNAGC 1 cut(s) 735
Bpu1102I GCTNAGC 1 cut(s) 804
BpuMI CCSGG 2 cut(s) 585, 586
Bsa29I ATCGAT 1 cut(s) 774
BsaAI YACGTR 1 cut(s) 88
BsaI GGTCTC 1 cut(s) 1226
BsaJI CCNNGG 3 cut(s) 584, 585, 959
BsaWI WCCGGW 1 cut(s) 293
BsaXI ACNNNNNCTCC 2 cut(s) 288, 318
Bsc4I CCNNNNNNNGG 4 cut(s) 40, 192, 445, 585
Bse1I ACTGG 2 cut(s) 169, 256
BseBI CCWGG 1 cut(s) 834
BseCI ATCGAT 1 cut(s) 774
BseDI CCNNGG 3 cut(s) 584, 585, 959
BseGI GGATG 3 cut(s) 519, 767, 955
BseLI CCNNNNNNNGG 4 cut(s) 40, 192, 445, 585
BseMII CTCAG 3 cut(s) 726, 795, 956
BseNI ACTGG 2 cut(s) 169, 256
BseXI GCAGC 3 cut(s) 367, 1031, 1222
BseYI CCCAGC 1 cut(s) 1237
BsgI GTGCAG 1 cut(s) 1030
BshFI GGCC 5 cut(s) 22, 308, 561, 819, 1119
BshVI ATCGAT 1 cut(s) 774
BsiHKAI GWGCWC 2 cut(s) 741, 810
BsiHKCI CYCGRG 2 cut(s) 464, 584
BsiSI CCGG 2 cut(s) 294, 585
BslI CCNNNNNNNGG 4 cut(s) 40, 192, 445, 585
BsmAI GTCTC 2 cut(s) 461, 1226
BsmI GAATGC 2 cut(s) 847, 990
BsnI GGCC 5 cut(s) 22, 308, 561, 819, 1119
Bso31I GGTCTC 1 cut(s) 1226
BsoBI CYCGRG 2 cut(s) 464, 584
Bsp1286I GDGCHC 4 cut(s) 8, 733, 741, 810
Bsp1407I TGTACA 1 cut(s) 474
Bsp143I GATC 6 cut(s) 254, 373, 628, 850, 945, 1179
Bsp1720I GCTNAGC 1 cut(s) 804
BspACI CCGC 4 cut(s) 99, 1120, 1130, 1207
BspANI GGCC 5 cut(s) 22, 308, 561, 819, 1119
BspCNI CTCAG 3 cut(s) 727, 796, 955
BspDI ATCGAT 1 cut(s) 774
BspLI GGNNCC 6 cut(s) 21, 135, 560, 732, 938, 1019
BspMI ACCTGC 2 cut(s) 1204, 1232
BspPI GGATC 4 cut(s) 262, 381, 623, 858
BspTNI GGTCTC 1 cut(s) 1226
BsrGI TGTACA 1 cut(s) 474
BsrI ACTGG 2 cut(s) 169, 256
BssECI CCNNGG 3 cut(s) 584, 585, 959
BssMI GATC 6 cut(s) 254, 373, 628, 850, 945, 1179
BssT1I CCWWGG 1 cut(s) 959
Bst2UI CCWGG 1 cut(s) 834
Bst4CI ACNGT 2 cut(s) 304, 497
BstAPI GCANNNNNTGC 2 cut(s) 239, 361
BstAUI TGTACA 1 cut(s) 474
BstBAI YACGTR 1 cut(s) 88
BstC8I GCNNGC 5 cut(s) 240, 821, 1063, 1105, 1187
BstDEI CTNAG 4 cut(s) 286, 735, 804, 942
BstF5I GGATG 3 cut(s) 519, 767, 955
BstHHI GCGC 1 cut(s) 1054
BstKTI GATC 6 cut(s) 257, 376, 631, 853, 948, 1182
BstMAI GTCTC 2 cut(s) 461, 1226
BstMBI GATC 6 cut(s) 254, 373, 628, 850, 945, 1179
BstMWI GCNNNNNNNGC 4 cut(s) 239, 361, 1058, 1207
BstNI CCWGG 1 cut(s) 834
BstNSI RCATGY 1 cut(s) 1065
BstSCI CCNGG 3 cut(s) 583, 584, 832
BstSFI CTRYAG 1 cut(s) 493
BstV1I GCAGC 3 cut(s) 367, 1031, 1222
Bsu15I ATCGAT 1 cut(s) 774
BsuRI GGCC 5 cut(s) 22, 308, 561, 819, 1119
BsuTUI ATCGAT 1 cut(s) 774
BtsCI GGATG 3 cut(s) 519, 767, 955
BtsI GCAGTG 2 cut(s) 852, 1047
BtsIMutI CAGTG 4 cut(s) 77, 162, 852, 1047
BveI ACCTGC 2 cut(s) 1204, 1232
Cac8I GCNNGC 5 cut(s) 240, 821, 1063, 1105, 1187
CaiI CAGNNNCTG 1 cut(s) 164
CfoI GCGC 1 cut(s) 1054
Cfr13I GGNCC 2 cut(s) 20, 559
Cfr9I CCCGGG 1 cut(s) 584
ClaI ATCGAT 1 cut(s) 774
Csp6I GTAC 5 cut(s) 249, 461, 475, 882, 1245
CspCI CAANNNNNGTGG 2 cut(s) 169, 204
CviAII CATG 4 cut(s) 451, 575, 910, 1062
CviQI GTAC 5 cut(s) 249, 461, 475, 882, 1245
DdeI CTNAG 4 cut(s) 286, 735, 804, 942
DpnI GATC 6 cut(s) 256, 375, 630, 852, 947, 1181
DpnII GATC 6 cut(s) 254, 373, 628, 850, 945, 1179
EaeI YGGCCR 2 cut(s) 306, 1117
Ecl136II GAGCTC 2 cut(s) 739, 808
Eco130I CCWWGG 1 cut(s) 959
Eco24I GRGCYC 4 cut(s) 8, 733, 741, 810
Eco31I GGTCTC 1 cut(s) 1226
Eco32I GATATC 1 cut(s) 778
Eco53kI GAGCTC 2 cut(s) 739, 808
Eco57I CTGAAG 2 cut(s) 416, 506
Eco72I CACGTG 1 cut(s) 88
Eco88I CYCGRG 2 cut(s) 464, 584
EcoICRI GAGCTC 2 cut(s) 739, 808
EcoO109I RGGNCCY 1 cut(s) 559
EcoRII CCWGG 1 cut(s) 832
EcoRV GATATC 1 cut(s) 778
EcoT14I CCWWGG 1 cut(s) 959
EcoT22I ATGCAT 1 cut(s) 911
EcoT38I GRGCYC 4 cut(s) 8, 733, 741, 810
ErhI CCWWGG 1 cut(s) 959
FaeI CATG 4 cut(s) 454, 578, 913, 1065
FalI AAGNNNNNCTT 2 cut(s) 417, 449
FatI CATG 4 cut(s) 450, 574, 909, 1061
FauI CCCGC 1 cut(s) 106
FauNDI CATATG 2 cut(s) 710, 1203
FbaI TGATCA 1 cut(s) 1179
FblI GTMKAC 1 cut(s) 1039
Fnu4HI GCNGC 6 cut(s) 356, 1045, 1120, 1130, 1208, 1211
FokI GGATG 3 cut(s) 526, 754, 942
FriOI GRGCYC 4 cut(s) 8, 733, 741, 810
Fsp4HI GCNGC 6 cut(s) 356, 1045, 1120, 1130, 1208, 1211
FspBI CTAG 1 cut(s) 815
GlaI GCGC 1 cut(s) 1053
GluI GCNGC 6 cut(s) 356, 1045, 1120, 1130, 1208, 1211
GsaI CCCAGC 1 cut(s) 1241
HaeIII GGCC 5 cut(s) 22, 308, 561, 819, 1119
HapII CCGG 2 cut(s) 294, 585
HhaI GCGC 1 cut(s) 1054
Hin1II CATG 4 cut(s) 454, 578, 913, 1065
Hin6I GCGC 1 cut(s) 1052
HinP1I GCGC 1 cut(s) 1052
HinfI GANTC 4 cut(s) 91, 264, 913, 1227
HpaII CCGG 2 cut(s) 294, 585
HphI GGTGA 6 cut(s) 23, 368, 628, 701, 1023, 1161
Hpy166II GTNNAC 1 cut(s) 1040
Hpy188I TCNGA 4 cut(s) 106, 486, 945, 1226
Hpy188III TCNNGA 4 cut(s) 347, 439, 734, 1091
Hpy8I GTNNAC 1 cut(s) 1040
HpyAV CCTTC 5 cut(s) 115, 310, 821, 1031, 1118
HpyCH4III ACNGT 2 cut(s) 304, 497
HpyCH4IV ACGT 1 cut(s) 87
HpyF10VI GCNNNNNNNGC 4 cut(s) 239, 361, 1058, 1207
HpyF3I CTNAG 4 cut(s) 286, 735, 804, 942
HpySE526I ACGT 1 cut(s) 87
Hsp92II CATG 4 cut(s) 454, 578, 913, 1065
HspAI GCGC 1 cut(s) 1052
Ksp22I TGATCA 1 cut(s) 1179
Kzo9I GATC 6 cut(s) 254, 373, 628, 850, 945, 1179
LmnI GCTCC 5 cut(s) 139, 736, 813, 1023, 1163
Lsp1109I GCAGC 3 cut(s) 367, 1031, 1222
LweI GCATC 6 cut(s) 37, 145, 351, 504, 896, 1175
MaeI CTAG 1 cut(s) 815
MaeII ACGT 1 cut(s) 87
MaeIII GTNAC 3 cut(s) 88, 160, 167
MalI GATC 6 cut(s) 256, 375, 630, 852, 947, 1181
MboI GATC 6 cut(s) 254, 373, 628, 850, 945, 1179
MboII GAAGA 2 cut(s) 400, 908
MfeI CAATTG 1 cut(s) 999
MhlI GDGCHC 4 cut(s) 8, 733, 741, 810
MlsI TGGCCA 1 cut(s) 308
MluCI AATT 5 cut(s) 219, 442, 900, 999, 1154
MluNI TGGCCA 1 cut(s) 308
MlyI GAGTC 1 cut(s) 85
MmeI TCCRAC 1 cut(s) 911
MnlI CCTC 7 cut(s) 34, 112, 139, 621, 644, 951, 1143
Mox20I TGGCCA 1 cut(s) 308
Mph1103I ATGCAT 1 cut(s) 911
MroXI GAANNNNTTC 1 cut(s) 900
MscI TGGCCA 1 cut(s) 308
MseI TTAA 3 cut(s) 648, 1157, 1249
MslI CAYNNNNRTG 3 cut(s) 381, 527, 600
Msp20I TGGCCA 1 cut(s) 308
MspA1I CMGCKG 2 cut(s) 358, 788
MspI CCGG 2 cut(s) 294, 585
MspR9I CCNGG 3 cut(s) 585, 586, 834
MunI CAATTG 1 cut(s) 999
Mva1269I GAATGC 2 cut(s) 847, 990
MvaI CCWGG 1 cut(s) 834
MwoI GCNNNNNNNGC 4 cut(s) 239, 361, 1058, 1207
NciI CCSGG 2 cut(s) 585, 586
NdeI CATATG 2 cut(s) 710, 1203
NdeII GATC 6 cut(s) 254, 373, 628, 850, 945, 1179
NlaIII CATG 4 cut(s) 454, 578, 913, 1065
NlaIV GGNNCC 6 cut(s) 21, 135, 560, 732, 938, 1019
NmuCI GTSAC 3 cut(s) 88, 160, 167
NsiI ATGCAT 1 cut(s) 911
NspI RCATGY 1 cut(s) 1065
PaeI GCATGC 1 cut(s) 1065
PctI GAATGC 2 cut(s) 847, 990
PdmI GAANNNNTTC 1 cut(s) 900
PfeI GAWTC 3 cut(s) 264, 913, 1227
PfoI TCCNGGA 1 cut(s) 832
PkrI GCNGC 6 cut(s) 357, 1046, 1121, 1131, 1209, 1212
PleI GAGTC 1 cut(s) 85
PmaCI CACGTG 1 cut(s) 88
PmlI CACGTG 1 cut(s) 88
PpsI GAGTC 1 cut(s) 85
Ppu21I YACGTR 1 cut(s) 88
Psp124BI GAGCTC 2 cut(s) 741, 810
Psp6I CCWGG 1 cut(s) 832
PspCI CACGTG 1 cut(s) 88
PspFI CCCAGC 1 cut(s) 1237
PspGI CCWGG 1 cut(s) 832
PspN4I GGNNCC 6 cut(s) 21, 135, 560, 732, 938, 1019
PspPI GGNCC 2 cut(s) 20, 559
PstNI CAGNNNCTG 1 cut(s) 164
PvuII CAGCTG 2 cut(s) 358, 788
RsaI GTAC 5 cut(s) 250, 462, 476, 883, 1246
RsaNI GTAC 5 cut(s) 249, 461, 475, 882, 1245
RseI CAYNNNNRTG 3 cut(s) 381, 527, 600
SacI GAGCTC 2 cut(s) 741, 810
SaqAI TTAA 3 cut(s) 648, 1157, 1249
SatI GCNGC 6 cut(s) 356, 1045, 1120, 1130, 1208, 1211
Sau3AI GATC 6 cut(s) 254, 373, 628, 850, 945, 1179
Sau96I GGNCC 2 cut(s) 20, 559
SchI GAGTC 1 cut(s) 85
ScrFI CCNGG 3 cut(s) 585, 586, 834
SduI GDGCHC 4 cut(s) 8, 733, 741, 810
SfaNI GCATC 6 cut(s) 37, 145, 351, 504, 896, 1175
SfcI CTRYAG 1 cut(s) 493
SmaI CCCGGG 1 cut(s) 586
SmiMI CAYNNNNRTG 3 cut(s) 381, 527, 600
SphI GCATGC 1 cut(s) 1065
Sse9I AATT 5 cut(s) 219, 442, 900, 999, 1154
SsiI CCGC 4 cut(s) 99, 1120, 1130, 1207
SspI AATATT 1 cut(s) 1028
SspMI CTAG 1 cut(s) 815
SstI GAGCTC 2 cut(s) 741, 810
StyD4I CCNGG 3 cut(s) 583, 584, 832
StyI CCWWGG 1 cut(s) 959
TaaI ACNGT 2 cut(s) 304, 497
TaiI ACGT 1 cut(s) 90
TaqI TCGA 3 cut(s) 346, 774, 904
TasI AATT 5 cut(s) 219, 442, 900, 999, 1154
TatI WGTACW 1 cut(s) 474
TauI GCSGC 3 cut(s) 1122, 1132, 1210
TfiI GAWTC 3 cut(s) 264, 913, 1227
Tru1I TTAA 3 cut(s) 648, 1157, 1249
Tru9I TTAA 3 cut(s) 648, 1157, 1249
TscAI CASTG 4 cut(s) 84, 169, 852, 1054
TseFI GTSAC 3 cut(s) 88, 160, 167
TseI GCWGC 3 cut(s) 355, 1044, 1210
Tsp45I GTSAC 3 cut(s) 88, 160, 167
TspDTI ATGAA 2 cut(s) 518, 926
TspGWI ACGGA 2 cut(s) 229, 770
TspMI CCCGGG 1 cut(s) 584
TspRI CASTG 4 cut(s) 84, 169, 852, 1054
XapI RAATTY 2 cut(s) 442, 900
XceI RCATGY 1 cut(s) 1065
XmaI CCCGGG 1 cut(s) 584
XmiI GTMKAC 1 cut(s) 1039
XmnI GAANNNNTTC 1 cut(s) 900
XspI CTAG 1 cut(s) 815
Zsp2I ATGCAT 1 cut(s) 911
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.