Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006750

Physical Location & Seq

Genomic Coordinates Forward (+)

14165125 .. 14173509

Gene Structure 8385 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G33435.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3978 bp

ATGAACGAAGTTAATAAGCAAAAGGAAAATCGTGATGGACATGAAACACTTGTAAATGAAGAAGGATCTGCTGCTCGAACAAGACCTACAAGTGTTGAGGAGATTAGGCTAAGGAGGAAGAGGAAAGAGTCCTTGGAAAATGTGAAGGAGGAAACTGTAGGAGCAGCACAGTTACTGGGTTACGATCTTGTTGAAAAGGCTTCTGACTATCATGAGTCCAAGAATTTGAGGCGTGAAGAACATGTTGAAGACAGTTCAAGAAAGGAAAAAGAAGCCATTTCTAGATGTAGGGAAGAAAAAATAGAAAAACCAATGAAAGAGGACCCTGTGGGAGCAGCTCAGTTACCCGATAAAAATCTTGTTGAGAAGGTTCTTGACTGTCATGAGTCTGAAAAAGGGTATGATAGATCCGAGAAACTGAGTCATGAAGAGCTTGTTATGGACAGCTCAAGAAAGAAAGAAGAGGCTATTTCTAGTTCTAGAGAAGAAAAACTTGATAAACCAATAAAAGATGATCTTGTTGGAACAGCTCAGTTACTGGGTAATGATCTTGTTGAGAAGGTTCCTGAATATCATGTGTCTGAAAAAGAGCATGATGGATCCAAGAACGTGAGGCGTGAAGAACGTGTTAAGGACAGTTTAAGAAAGAAAGAGGACATAACTTCTAGTTCTAGGGATGAAACACCAATGAAAGAGGATCATGTGGGAGCAGCTCAGTTACGGGGTAACGATATCGTTGAGAAGGTTTCTGACAATCATGCATCTGAAAAAGGGCATGATAAATCCAATAAAGTGAGGCGTGAAGAACATGTTAAGGACAGTTCAAGAAAGAAAGAAGACTACATTTCTAGTTTTAGAGAAGAAAAATCAAGAAAAGAGGATCATGTGGGAGCAGCTATGTTACTGGGTCACGATATTGTTGACAAGTTTTCTGACTATCATGCGTCTGAAAAACGGCATGATAGGTCGAAGAAAGTGAGGCGTGACGAACATGTTAAGGAAAGCTCAAGAAAGAAAGAAGACGCCACTTCTGGTTCTACGGAAGAAAAATCAATGAAAGAGGATCATGCGGGAGCAGCTCAGTTACTGGGTCACGATATTGTTGAGAAGGTTTCTGACTATCATGCGTCTGAAAAAGGGCATGATAGATCGACGAAAGTGAGGCGTGAAGAACGTGTTAAGGACAGCTCAAGAAAGAAAGAAGATGCCACTTCTGGTTCTAGGGAAGAAAGAGTAGATAATTCAACGAAAGAGGACCCTGTTGGAGCAGCTCAGTTACTAGGTAACGATTTTGTTGAGAAGGTTTCTGACTATCATACGTCTGAAAGAGGGCATGAAAGATCCAAGAAAGTGAGGCGTGAAGAACGTGTTAAGGACAATTCAAGAAAGAAGGAAGAGGCTATTTCTAGTTCTAGAGGAGAAAAACCGATTAAAGAGGATCATGTGGGAGCAGCTCAGTTACTGGGTAACGATCTTGTTGAGATGGTTTCTGACTATCATGAAACTGAAAAAGGGTATGACAGATCCAAGAAATTGAGCCGTGAAGAGCGTGTTAAGGACAGTTCAAGAAAGAAGGAAGAGGCTATTTCTAGTTCTAGAGAAGAAAACCTAGATAAACAAAAAAAAGACGAGTCTACTTCAAATAGAAAAAGGAAAGCAGAAGGAGAGTGTTCTACAGCTGAAACAGAATCAATTGAAGAACATAGTAAGGATAGACGAGGAAAGAAAGAAGAAACTAATTCTAATTGTAGGGAGGAAAGACGAGATAAGAAGATGAAGAAGGAAGACCTTGCTTCAAACAGAAAAATTGAAGGAGAAATCCCTACAACTGAAACAAAAACAATGACAGATAGAGATGGGCTTTGTAGTAAAAAGCGTCTTAGAAGTCTAGTTGTGGCAGACGTACCTCGAGATGAAAGTAGTATAAAACCTGACAATGGAGACAAGAGAAAGAATCAAAATGGAAATCATAAGAAGAATAGGGAGATAAATATGTCAAAGAGGCATGATCCAGGAAAAGTGCACAGTGTTGAAGTTTCAGAGCGATGGGAGAGAAGGGAACAACCAAAATCACGTCAACGCGACTTGAGAGAGAAAAGAAGGAGATCAAGAAGTCGAGATCATGGGCAGGACAGACAGAAAAGGTCATCCCCCTTACCAAGGGCTGAAAAGGCTACATCGCGTCATAAGAGAAACCATGAGGAGCGATCGGAAAATGTTGTCAAAGATAGGTCGGGAAAACATCATTGTAATGATAATGAAGACAAAGTGACAAGCACTGTAAGTAACAAGTCTAGACGGTATAGTGCTTCCAAAAGTGAACTTGGTGGATATTCACCACGGAAAAGAAGGGAGCAAGCATCTACCAAGGCTGCATCTCCACCTAATCTTTCTTCCGAGAAAAAAAGTGCTAAATGGGGTCTTGCAGCTACTGTAACTGCTGGCATGTTTTCGGACTCAGTATTTTCTGGTCTCCAAGCAGCAACTCAGACAGCATATCCTACCATCAGTGAGGCTTCCTTGACGCTTTTGAAGCCACTTATGGTTATGGATGCGCCTTTTAGGACGCCACCGGCAAGGCAGACCACTTCATTCGATTCTGTTCAACTGACAGAATCCACCAGACGTATGAGAAGACTTTACGCAGAAAATGTGCCTGATTCGGCCTCTGAGAAGTCTCTGATTGAATGCTTCAATGGCTATATGTTATCTTCAGGGTCCAATCACATAAAAGGAAGTGAACCATGTATTAGCTGTATTATAAACAAGGAAAAAAGTCAGGCGCTAGTGGAGTTCCTTACGCCACAAGATGCCTCTGCTGCACTCTCCTTGGATGGCTGCTCCTTTGCGGGTTCAAACCTCAAAATCCGACGCCCTAAAGACTATGTCAGGACAACAAACGGTGAATTGGAGAAAAAAGAGCCAGCCGCAAATGCAGTAAGTGACAACGTGGAGGACTCATCAAACAAGATCTTCATTGGCGGATTTTCAAAAGCTATTTCATCTGAAATGCTTATGGAGATTGTCAGCGTCTTTGGACCTTTGAAAGCATACCGGTTCGTGAGCAACAATGATCTCAATCAGCGATGCGCTTTCCTAGAGTACACTGATGGATCTGTTACCCTCAAAGCTTGTGCTGGTCTAAATGGTATGAGGTTAGGTGGCAGTGTAATAACAGCCGTTTGTGCATTTCCTGATGCATCATCCGTAGCGGTGAATGAGAATCCACCATTCTATGGGATACCTAGCCATGCAAAACCACTTCTTGGCAAGCCTAAGAATATTCTAAAGCTAAAAAATGTGGTTGACCCAGAAGATCTCACGTCGTTTTCCGAGCAAGAAGTGAAAGAAATTTTGGAGGATGTACGGTTAGAATGTGCCAGGTTTGGGGTTATTAAGTCGATAAACATCTTGGAACACAAGAGCAAAGATATCACTGTTTCTGAAACAAATCCATTGTTGAACTTAGAATCAACTGATTCTAAAGAAATGAATGTGTCAGTGATCGAGGAGAAAGATGAAGGATCCGAGAAAGCGGAAGATATTGCAGACAATGTAGATCTTGCAGAGGTTGTCATGCCAGACAGTTTGACAGGTGAAGACAAGTTATGTGAACCGTGCTCGGATACTGCTGCTGAAACAAGCACTCAAGAAAATGAAGATCTACACTCCACTGAACAAGAGCATTGTGAAAAGATTGTTGAAGAAAGTGCGCAGGCCGAGGCAGAGAATCCACAAGAAGTAGCATCAGTGCGTACCGTGAAGACAAGATGGGATGCTGGCGACAAGATAGAAGAAGAACAAGAAGAAGACCCCGAGGATGTATTTGAGACGGGTTGTATCTTCATTGAGTACAGAAGACCAGAAGCGACATGTGATGCAGCCCATTCTTTACACGGAAGGCTATATGATAACCGGATTGTGAAAGCAGAATATGTTTCTAAAGAGCTTTACCAAATCCGGTTCCCAAGTGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000243 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006810 GO:0006913 GO:0008150 GO:0008152 GO:0008187 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0030628 GO:0031974 GO:0031981 GO:0032239 GO:0032241 GO:0032386 GO:0032388 GO:0032879 GO:0032991 GO:0034641 GO:0036002 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0046822 GO:0046824 GO:0046831 GO:0046833 GO:0046907 GO:0048518 GO:0050789 GO:0051049 GO:0051050 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0060341 GO:0065007 GO:0070013 GO:0071004 GO:0071010 GO:0071704 GO:0089701 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1

Protein Analysis

1325

Amino Acids

149.84

Weight (kDa)

6.22

Isoelectric Point (pI)

57.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	991 - 1058	7.9e-08	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006750)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33435
fragaria_vesca	FvH4_4g04160 FvH4_4g04160 FvH4_4g04160
malus_domestica	MD13G1218500.v1.1
prunus_persica	Prupe.1G045200_v2.0.a1 Prupe.1G045200_v2.0.a1
pyrus_communis	pycom13g19340
rosa_chinensis	RchiOBHm_Chr4g0394621 RchiOBHm_Chr4g0394661
rosa_laevigata	RLG00000009679 RLG00000009684
rosa_multiflora	Rmu_sc0005424.1_g000012 Rmu_sc0006945.1_g000040
rosa_roxburghii	Rroxscaffold_5G00339670
rosa_rugosa	Rorug03G0363100.1 Rorug03G0363500.1 Rorug03G0363600.1 Rorug03G0363700.1
rosa_samantha	Rh4AG053300 Rh4AG054000 Rh4BG051200 Rh4BG051700 Rh4CG058500 Rh4DG050200
rosa_wichuraiana	Rw4G004300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2762
Acc16I	TGCGCA	1 cut(s)	3714
AccB7I	CCANNNNNTGG	2 cut(s)	3236, 3266
AccI	GTMKAC	1 cut(s)	1634
AccII	CGCG	2 cut(s)	2082, 2182
AciI	CCGC	6 cut(s)	1070, 2849, 2928, 2982, 3212, 3536
AcsI	RAATTY	2 cut(s)	223, 3351
AcuI	CTGAAG	1 cut(s)	2697
AcyI	GRCGYC	3 cut(s)	1023, 2567, 2872
AfaI	GTAC	5 cut(s)	1905, 3104, 3366, 3757, 3854
AfiI	CCNNNNNNNGG	5 cut(s)	1937, 2160, 3236, 3266, 3387
AflIII	ACRYGT	7 cut(s)	241, 625, 808, 991, 1174, 1366, 3872
AgeI	ACCGGT	1 cut(s)	3054
AjiI	CACGTC	2 cut(s)	2075, 3324
AjnI	CCWGG	2 cut(s)	2011, 3380
AjuI	GAANNNNNNNTTGG	4 cut(s)	116, 148, 3338, 3370
Alw21I	GWGCWC	2 cut(s)	2025, 3623
Alw26I	GTCTC	4 cut(s)	1935, 2477, 2682, 3824
Alw44I	GTGCAC	1 cut(s)	2021
AlwNI	CAGNNNCTG	5 cut(s)	175, 538, 1087, 1462, 2432
Ama87I	CYCGRG	2 cut(s)	1908, 3815
AoxI	GGCC	2 cut(s)	2664, 3717
ApaLI	GTGCAC	1 cut(s)	2021
ApoI	RAATTY	2 cut(s)	223, 3351
AsiGI	ACCGGT	1 cut(s)	3054
AspLEI	GCGC	4 cut(s)	2557, 2785, 3092, 3715
AspS9I	GGNCC	4 cut(s)	322, 1255, 2718, 3038
AsuHPI	GGTGA	4 cut(s)	2328, 2915, 3226, 3608
AvaI	CYCGRG	2 cut(s)	1908, 3815
AvaII	GGWCC	4 cut(s)	322, 1255, 2718, 3038
BaeGI	GKGCMC	1 cut(s)	2025
BamHI	GGATCC	2 cut(s)	599, 3524
Bbv12I	GWGCWC	2 cut(s)	2025, 3623
BccI	CCATC	9 cut(s)	29, 590, 1477, 1850, 2040, 2513, 2828, 3104, 3765
BceAI	ACGGC	3 cut(s)	971, 1524, 3164
BciT130I	CCWGG	2 cut(s)	2013, 3382
BciVI	GTATCC	2 cut(s)	3234, 3619
BcoDI	GTCTC	4 cut(s)	1935, 2477, 2682, 3824
BfmI	CTRYAG	2 cut(s)	156, 1674
BfoI	RGCGCY	1 cut(s)	2786
BfuI	GTATCC	2 cut(s)	3234, 3619
BglII	AGATCT	4 cut(s)	2970, 3316, 3559, 3661
Bme1390I	CCNGG	2 cut(s)	2013, 3382
Bme18I	GGWCC	4 cut(s)	322, 1255, 2718, 3038
BmeT110I	CYCGRG	2 cut(s)	1908, 3815
BmgBI	CACGTC	2 cut(s)	2075, 3324
BmgT120I	GGNCC	4 cut(s)	322, 1255, 2718, 3038
BmiI	GGNNCC	7 cut(s)	324, 564, 601, 1257, 2719, 3526, 3965
BmrFI	CCNGG	2 cut(s)	2013, 3382
BmrI	ACTGGG	5 cut(s)	185, 548, 914, 1097, 1472
BmuI	ACTGGG	5 cut(s)	185, 548, 914, 1097, 1472
Bpu10I	CCTNAGC	1 cut(s)	110
BpuEI	CTTGAG	5 cut(s)	433, 991, 1174, 2107, 3633
BsaBI	GATNNNNATC	3 cut(s)	354, 3078, 3407
BsaHI	GRCGYC	3 cut(s)	1023, 2567, 2872
BsaI	GGTCTC	1 cut(s)	2477
BsaJI	CCNNGG	7 cut(s)	132, 2159, 2339, 2367, 2829, 3720, 3816
BsaWI	WCCGGW	3 cut(s)	3054, 3915, 3960
Bsc4I	CCNNNNNNNGG	5 cut(s)	1937, 2160, 3236, 3266, 3387
Bse118I	RCCGGY	2 cut(s)	2572, 3054
Bse1I	ACTGG	5 cut(s)	180, 543, 909, 1092, 1467
Bse8I	GATNNNNATC	3 cut(s)	354, 3078, 3407
BseBI	CCWGG	2 cut(s)	2013, 3382
BseDI	CCNNGG	7 cut(s)	132, 2159, 2339, 2367, 2829, 3720, 3816
BseGI	GGATG	8 cut(s)	682, 2147, 2557, 2839, 3203, 3367, 3781, 3826
BseJI	GATNNNNATC	3 cut(s)	354, 3078, 3407
BseLI	CCNNNNNNNGG	5 cut(s)	1937, 2160, 3236, 3266, 3387
BseNI	ACTGG	5 cut(s)	180, 543, 909, 1092, 1467
BseRI	GAGGAG	4 cut(s)	113, 1431, 2216, 3524
BseSI	GKGCMC	1 cut(s)	2025
BsgI	GTGCAG	1 cut(s)	2805
Bsh1236I	CGCG	2 cut(s)	2082, 2182
Bsh1285I	CGRYCG	1 cut(s)	2210
BshFI	GGCC	2 cut(s)	2666, 3719
BshTI	ACCGGT	1 cut(s)	3054
BsiEI	CGRYCG	1 cut(s)	2210
BsiHKAI	GWGCWC	2 cut(s)	2025, 3623
BsiHKCI	CYCGRG	2 cut(s)	1908, 3815
BsiSI	CCGG	4 cut(s)	2573, 3055, 3916, 3961
BslI	CCNNNNNNNGG	5 cut(s)	1937, 2160, 3236, 3266, 3387
BsmAI	GTCTC	4 cut(s)	1935, 2477, 2682, 3824
BsmBI	CGTCTC	1 cut(s)	3824
BsmI	GAATGC	1 cut(s)	2693
BsnI	GGCC	2 cut(s)	2666, 3719
Bso31I	GGTCTC	1 cut(s)	2477
BsoBI	CYCGRG	2 cut(s)	1908, 3815
Bsp1286I	GDGCHC	2 cut(s)	2025, 3623
BspACI	CCGC	6 cut(s)	1070, 2849, 2928, 2982, 3212, 3536
BspANI	GGCC	2 cut(s)	2666, 3719
BspFNI	CGCG	2 cut(s)	2082, 2182
BspHI	TCATGA	4 cut(s)	211, 382, 424, 1498
BspLI	GGNNCC	7 cut(s)	324, 564, 601, 1257, 2719, 3526, 3965
BspQI	GCTCTTC	2 cut(s)	423, 1539
BspTNI	GGTCTC	1 cut(s)	2477
BsrFI	RCCGGY	2 cut(s)	2572, 3054
BsrI	ACTGG	5 cut(s)	180, 543, 909, 1092, 1467
BssAI	RCCGGY	2 cut(s)	2572, 3054
BssECI	CCNNGG	7 cut(s)	132, 2159, 2339, 2367, 2829, 3720, 3816
BssNI	GRCGYC	3 cut(s)	1023, 2567, 2872
BssT1I	CCWWGG	4 cut(s)	132, 2159, 2367, 2829
Bst2UI	CCWGG	2 cut(s)	2013, 3382
Bst6I	CTCTTC	6 cut(s)	113, 423, 456, 1389, 1539, 1572
BstACI	GRCGYC	3 cut(s)	1023, 2567, 2872
BstC8I	GCNNGC	6 cut(s)	2358, 2443, 2925, 3272, 3717, 3781
BstDSI	CCRYGG	1 cut(s)	2339
BstENI	CCTNNNNNAGG	1 cut(s)	2158
BstF5I	GGATG	8 cut(s)	682, 2147, 2557, 2839, 3203, 3367, 3781, 3826
BstFNI	CGCG	2 cut(s)	2082, 2182
BstH2I	RGCGCY	1 cut(s)	2786
BstHHI	GCGC	4 cut(s)	2557, 2785, 3092, 3715
BstMAI	GTCTC	4 cut(s)	1935, 2477, 2682, 3824
BstMCI	CGRYCG	1 cut(s)	2210
BstMWI	GCNNNNNNNGC	7 cut(s)	1076, 2171, 2533, 2697, 2819, 2933, 3185
BstNI	CCWGG	2 cut(s)	2013, 3382
BstNSI	RCATGY	5 cut(s)	245, 812, 995, 2449, 3876
BstSCI	CCNGG	2 cut(s)	2011, 3380
BstSFI	CTRYAG	2 cut(s)	156, 1674
BstSLI	GKGCMC	1 cut(s)	2025
BstUI	CGCG	2 cut(s)	2082, 2182
BsuI	GTATCC	2 cut(s)	3234, 3619
BsuRI	GGCC	2 cut(s)	2666, 3719
BtgI	CCRYGG	1 cut(s)	2339
BtgZI	GCGATG	3 cut(s)	2059, 2163, 3100
BtrI	CACGTC	2 cut(s)	2075, 3324
BtsCI	GGATG	8 cut(s)	682, 2147, 2557, 2839, 3203, 3367, 3781, 3826
BtsI	GCAGTG	1 cut(s)	3172
BtsIMutI	CAGTG	9 cut(s)	2032, 2277, 2515, 3105, 3172, 3435, 3507, 3672, 3756
Cac8I	GCNNGC	6 cut(s)	2358, 2443, 2925, 3272, 3717, 3781
CaiI	CAGNNNCTG	5 cut(s)	175, 538, 1087, 1462, 2432
CciI	TCATGA	4 cut(s)	211, 382, 424, 1498
CfoI	GCGC	4 cut(s)	2557, 2785, 3092, 3715
Cfr10I	RCCGGY	2 cut(s)	2572, 3054
Cfr13I	GGNCC	4 cut(s)	322, 1255, 2718, 3038
CseI	GACGC	9 cut(s)	933, 1031, 1116, 1865, 2171, 2533, 2575, 2880, 3019
Csp6I	GTAC	5 cut(s)	1904, 3103, 3365, 3756, 3853
CspAI	ACCGGT	1 cut(s)	3054
CviQI	GTAC	5 cut(s)	1904, 3103, 3365, 3756, 3853
Eam1104I	CTCTTC	6 cut(s)	113, 423, 456, 1389, 1539, 1572
EarI	CTCTTC	6 cut(s)	113, 423, 456, 1389, 1539, 1572
EciI	GGCGGA	1 cut(s)	2997
Eco130I	CCWWGG	4 cut(s)	132, 2159, 2367, 2829
Eco31I	GGTCTC	1 cut(s)	2477
Eco32I	GATATC	2 cut(s)	733, 3433
Eco47I	GGWCC	4 cut(s)	322, 1255, 2718, 3038
Eco57I	CTGAAG	1 cut(s)	2697
Eco88I	CYCGRG	2 cut(s)	1908, 3815
EcoNI	CCTNNNNNAGG	1 cut(s)	2158
EcoO109I	RGGNCCY	2 cut(s)	322, 1255
EcoRII	CCWGG	2 cut(s)	2011, 3380
EcoRV	GATATC	2 cut(s)	733, 3433
EcoT14I	CCWWGG	4 cut(s)	132, 2159, 2367, 2829
EcoT22I	ATGCAT	2 cut(s)	763, 3202
ErhI	CCWWGG	4 cut(s)	132, 2159, 2367, 2829
Esp3I	CGTCTC	1 cut(s)	3824
FalI	AAGNNNNNCTT	4 cut(s)	477, 509, 501, 533
FauI	CCCGC	2 cut(s)	1063, 2842
FblI	GTMKAC	1 cut(s)	1634
FokI	GGATG	8 cut(s)	689, 2134, 2564, 2846, 3190, 3374, 3788, 3833
FspI	TGCGCA	1 cut(s)	3714
GlaI	GCGC	4 cut(s)	2556, 2784, 3091, 3714
HaeII	RGCGCY	1 cut(s)	2786
HaeIII	GGCC	2 cut(s)	2666, 3719
HapII	CCGG	4 cut(s)	2573, 3055, 3916, 3961
HgaI	GACGC	9 cut(s)	933, 1031, 1116, 1865, 2171, 2533, 2575, 2880, 3019
HhaI	GCGC	4 cut(s)	2557, 2785, 3092, 3715
Hin1I	GRCGYC	3 cut(s)	1023, 2567, 2872
Hin6I	GCGC	4 cut(s)	2555, 2783, 3090, 3713
HinP1I	GCGC	4 cut(s)	2555, 2783, 3090, 3713
HincII	GTYRAC	3 cut(s)	922, 2078, 3307
HindII	GTYRAC	3 cut(s)	922, 2078, 3307
HindIII	AAGCTT	1 cut(s)	3129
HpaII	CCGG	4 cut(s)	2573, 3055, 3916, 3961
HphI	GGTGA	4 cut(s)	2328, 2915, 3226, 3608
Hpy166II	GTNNAC	9 cut(s)	922, 1635, 2023, 2078, 2321, 2741, 3105, 3307, 3614
Hpy8I	GTNNAC	9 cut(s)	922, 1635, 2023, 2078, 2321, 2741, 3105, 3307, 3614
Hpy99I	CGWCG	3 cut(s)	1156, 2874, 3328
HpyF10VI	GCNNNNNNNGC	7 cut(s)	1076, 2171, 2533, 2697, 2819, 2933, 3185
Hsp92I	GRCGYC	3 cut(s)	1023, 2567, 2872
HspAI	GCGC	4 cut(s)	2555, 2783, 3090, 3713
LguI	GCTCTTC	2 cut(s)	423, 1539
MfeI	CAATTG	1 cut(s)	1692
MhlI	GDGCHC	2 cut(s)	2025, 3623
MlyI	GAGTC	7 cut(s)	137, 224, 395, 430, 1640, 2450, 2951
MmeI	TCCRAC	3 cut(s)	502, 1243, 2893
Mph1103I	ATGCAT	2 cut(s)	763, 3202
MslI	CAYNNNNRTG	1 cut(s)	2250
MspA1I	CMGCKG	1 cut(s)	1679
MspI	CCGG	4 cut(s)	2573, 3055, 3916, 3961
MspR9I	CCNGG	2 cut(s)	2013, 3382
MunI	CAATTG	1 cut(s)	1692
Mva1269I	GAATGC	1 cut(s)	2693
MvaI	CCWGG	2 cut(s)	2013, 3382
MvnI	CGCG	2 cut(s)	2082, 2182
MwoI	GCNNNNNNNGC	7 cut(s)	1076, 2171, 2533, 2697, 2819, 2933, 3185
NlaIV	GGNNCC	7 cut(s)	324, 564, 601, 1257, 2719, 3526, 3965
NmeAIII	GCCGAG	1 cut(s)	3745
NmuCI	GTSAC	5 cut(s)	908, 983, 1091, 2269, 2942
NsbI	TGCGCA	1 cut(s)	3714
NsiI	ATGCAT	2 cut(s)	763, 3202
NspI	RCATGY	5 cut(s)	245, 812, 995, 2449, 3876
PaeR7I	CTCGAG	1 cut(s)	1908
PagI	TCATGA	4 cut(s)	211, 382, 424, 1498
PciI	ACATGT	4 cut(s)	241, 808, 991, 3872
PciSI	GCTCTTC	2 cut(s)	423, 1539
PctI	GAATGC	1 cut(s)	2693
PfeI	GAWTC	9 cut(s)	1688, 1954, 2597, 2615, 2660, 3223, 3470, 3479, 3730
PflFI	GACNNNGTC	1 cut(s)	2885
PflMI	CCANNNNNTGG	2 cut(s)	3236, 3266
PfoI	TCCNGGA	1 cut(s)	2011
PinAI	ACCGGT	1 cut(s)	3054
Ple19I	CGATCG	1 cut(s)	2210
PleI	GAGTC	7 cut(s)	136, 223, 394, 429, 1639, 2450, 2951
PpsI	GAGTC	7 cut(s)	136, 223, 394, 429, 1639, 2450, 2951
PpuMI	RGGWCCY	2 cut(s)	322, 1255
PscI	ACATGT	4 cut(s)	241, 808, 991, 3872
PsiI	TTATAA	1 cut(s)	2762
Psp5II	RGGWCCY	2 cut(s)	322, 1255
Psp6I	CCWGG	2 cut(s)	2011, 3380
PspGI	CCWGG	2 cut(s)	2011, 3380
PspN4I	GGNNCC	7 cut(s)	324, 564, 601, 1257, 2719, 3526, 3965
PspPI	GGNCC	4 cut(s)	322, 1255, 2718, 3038
PspPPI	RGGWCCY	2 cut(s)	322, 1255
PsrI	GAACNNNNNNTAC	2 cut(s)	70, 102
PstNI	CAGNNNCTG	5 cut(s)	175, 538, 1087, 1462, 2432
PsyI	GACNNNGTC	1 cut(s)	2885
PvuI	CGATCG	1 cut(s)	2210
PvuII	CAGCTG	1 cut(s)	1679
RsaI	GTAC	5 cut(s)	1905, 3104, 3366, 3757, 3854
RsaNI	GTAC	5 cut(s)	1904, 3103, 3365, 3756, 3853
RseI	CAYNNNNRTG	1 cut(s)	2250
SapI	GCTCTTC	2 cut(s)	423, 1539
Sau96I	GGNCC	4 cut(s)	322, 1255, 2718, 3038
SchI	GAGTC	7 cut(s)	137, 224, 395, 430, 1640, 2450, 2951
ScrFI	CCNGG	2 cut(s)	2013, 3382
SduI	GDGCHC	2 cut(s)	2025, 3623
SfcI	CTRYAG	2 cut(s)	156, 1674
Sfr274I	CTCGAG	1 cut(s)	1908
SinI	GGWCC	4 cut(s)	322, 1255, 2718, 3038
SlaI	CTCGAG	1 cut(s)	1908
SmiMI	CAYNNNNRTG	1 cut(s)	2250
SmlI	CTYRAG	6 cut(s)	448, 1006, 1189, 1908, 2086, 3648
SmoI	CTYRAG	6 cut(s)	448, 1006, 1189, 1908, 2086, 3648
SsiI	CCGC	6 cut(s)	1070, 2849, 2928, 2982, 3212, 3536
SspI	AATATT	1 cut(s)	3283
StyD4I	CCNGG	2 cut(s)	2011, 3380
StyI	CCWWGG	4 cut(s)	132, 2159, 2367, 2829
TaqI	TCGA	8 cut(s)	76, 968, 1151, 1909, 2116, 2595, 3401, 3507
TatI	WGTACW	2 cut(s)	3102, 3852
TauI	GCSGC	1 cut(s)	2930
TfiI	GAWTC	9 cut(s)	1688, 1954, 2597, 2615, 2660, 3223, 3470, 3479, 3730
TscAI	CASTG	9 cut(s)	2032, 2284, 2515, 3112, 3172, 3442, 3507, 3679, 3756
TseFI	GTSAC	5 cut(s)	908, 983, 1091, 2269, 2942
Tsp45I	GTSAC	5 cut(s)	908, 983, 1091, 2269, 2942
TspGWI	ACGGA	4 cut(s)	1055, 2356, 3196, 3912
TspRI	CASTG	9 cut(s)	2032, 2284, 2515, 3112, 3172, 3442, 3507, 3679, 3756
Tth111I	GACNNNGTC	1 cut(s)	2885
Van91I	CCANNNNNTGG	2 cut(s)	3236, 3266
VneI	GTGCAC	1 cut(s)	2021
VpaK11BI	GGWCC	4 cut(s)	322, 1255, 2718, 3038
XagI	CCTNNNNNAGG	1 cut(s)	2158
XapI	RAATTY	2 cut(s)	223, 3351
XbaI	TCTAGA	5 cut(s)	281, 479, 1412, 1595, 2294
XceI	RCATGY	5 cut(s)	245, 812, 995, 2449, 3876
XhoI	CTCGAG	1 cut(s)	1908
XmiI	GTMKAC	1 cut(s)	1634
Zsp2I	ATGCAT	2 cut(s)	763, 3202

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.