Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005424.1

Orthogroup ID

OG0006750

Physical Location & Seq

Genomic Coordinates Reverse (-)

52841 .. 61014

Gene Structure 8174 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005424.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2736 bp

atgagcacatcatctagtcggcggcatgaaaagaaagtgcatggccacgacgaagaaagtgccgctaggacaaggccttacggctatgaagagattatgcttaggaggaaggataagaagttgtgtgatagtgttgtggcggaagcggttgatttaggggatgtaccgggggaaggttgtaccgaaaatgtttcagaggcttttgaatccaaaaggggtgagagacggcataaagatttggcccctgttgttgaaaagcctttgtcggaggagagagtgaaggaaagctccagaaagaaagaaacgtatagttctaagagtactaaaacggaagacgatgttgttaaagggaaagttagaagaagcaatgagtcggagagcttgaaggataagccgaaaaaagatacaagaagtgaagctagaggagacaaaactgacaaacaagtacatggtaggaggaaaattgacaaggactcgattgatgagtctgtaaagaagcagtcaagagattattcaacaagaaaagaaagacatttggaccaaagtagaggagaacatgaaagagaaaccaagagaaaataccaacacgaaaatgatgacaaaatcagagacagaagtgctgcaaagaaacatgattcaggaaagcttcgcgctttagaaatttcagagagaaaggagaggacagaatcatcaaaatcacgctttgaagaatcaagacgcaaaaggggaagatcaaggagtagagaccgcgtggatagacataggttaagttctcggtcaccaagggcacacaaacatacattaaataatttggggcctcgcagcgttatatcatcttattctcccaaagataggtctggaagacagcatttggatattgatagtagcagagtgtctactaatggctcaagcagccactatcagcgacatggtgagtctgcgaatagacttggtggctattcccctaggaagagaaggactgaatctgctattaagactccatccccacccgatcgttcacctgaaaagaaaaatgccaggtgggatctcccccatgcatcaactgacaaggcattatctagtttggttgcttctcgttttcagtcatcaaacagtaatgtgtcctcaaatgtacatgggatgaccattgctgttgctgttgcctcaaccgccacaacatctattcctggagtttctcccaattctatattgactaagaagaatgcttccgttgactccgtgcaattaacacaagctacccggcgtatgaggaggcttcatgtagaaaatattccatctacaacctctgaaaacactttggtagaatctcttaataaatttttgttgtcttcgggcgtgaatcatattcaaggaacacaaccctgcatcagttgtgtgattaacaaagagaaggggcaagctcttgtggagtttcttacacctcaagatgctttggctgctctgtcatttgatggcagttcattctttggttctattctcaaaatcaggcgccctaaggactttgttgacgttgctactggtgaccccgagaaatcagtggctgcagctgagagtattgagacaattttcattggtgggatatcgaaggctctttcctcagaaatgcttctggaaatcattagtgtctttggacctttgaaggcataccattttgaggccaatgaggaacttaatggaccatgtgcttttctagagtatgtcgaccagtcagttactctcaaagcttgtgcgggtctgaatggtataaaattaggagggagagtgctaactgtggttcaggcaattcgtagtggatcatccatggtaaatagtggaaatgcatcactctatgagatcccagaacatgcaaagccacttctcaaacaaccttcacatatcctgaagcttagaaatgtgttcaatctggagcacatgtcatcactgtctgaacaagagattgaagaagttctggaagatgtgcgattagaatgtgccaggtttggcatggttaaatctgtaaagattgtcaagcatgcaaacaatcacattgtcaccactagagcgtgtgaagctgtcaatgatgcagaatctggtgggcactggcaaaatttatgttctgaagaaaaagcagcaaaaacagagactttggacgaacatattgataatgacggcaaggaaacgagtggagtgaagcttacaggggcacttaaagaagatgaagtcccagaaagtaattgctttggttatgataaaccagcaggtgattttgtagaggacaagtcatgtcaaatgggccaaccagataaagatattgaaatccaaggaagcaatgacttacctaatagcgaacccgaagaactcaccaacctgccaaacagcatgaaagatgcgtcagagtgttatgatgataaaactcctgaagttacaacagtagagagttctattatagaggaagttgatggtaagaaacaacagacttttgctggaacagatgacaatgtgggaacagaaacagactctattctggagagtggaaccaaggatcagcataatgggaaggataatgattttgatcttggaagcatattcgagcctgggtgtgtctttgtggagtttgggagatcagaagcctcttggatggcagcacattgtttacatggacgagtttttgaggatcggattgtgacagtggagtatatcgcacctgatcattacagggctaaatttttaaactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000243 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006810 GO:0006913 GO:0008150 GO:0008152 GO:0008187 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0030628 GO:0031974 GO:0031981 GO:0032239 GO:0032241 GO:0032386 GO:0032388 GO:0032879 GO:0032991 GO:0034641 GO:0036002 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0046822 GO:0046824 GO:0046831 GO:0046833 GO:0046907 GO:0048518 GO:0050789 GO:0051049 GO:0051050 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0060341 GO:0065007 GO:0070013 GO:0071004 GO:0071010 GO:0071704 GO:0089701 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1

Protein Analysis

911

Amino Acids

101.35

Weight (kDa)

6.91

Isoelectric Point (pI)

59.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006750)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33435
fragaria_vesca	FvH4_4g04160 FvH4_4g04160 FvH4_4g04160
malus_domestica	MD13G1218500.v1.1
prunus_persica	Prupe.1G045200_v2.0.a1 Prupe.1G045200_v2.0.a1
pyrus_communis	pycom13g19340
rosa_chinensis	RchiOBHm_Chr4g0394621 RchiOBHm_Chr4g0394661
rosa_laevigata	RLG00000009679 RLG00000009684
rosa_multiflora	Rmu_sc0005424.1_g000012 Rmu_sc0006945.1_g000040
rosa_roxburghii	Rroxscaffold_5G00339670
rosa_rugosa	Rorug03G0363100.1 Rorug03G0363500.1 Rorug03G0363600.1 Rorug03G0363700.1
rosa_samantha	Rh4AG053300 Rh4AG054000 Rh4BG051200 Rh4BG051700 Rh4CG058500 Rh4DG050200
rosa_wichuraiana	Rw4G004300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2249
Acc36I	ACCTGC	2 cut(s)	2249, 2376
AccB1I	GGYRCC	1 cut(s)	1509
AccI	GTMKAC	2 cut(s)	896, 1722
AccII	CGCG	2 cut(s)	651, 750
AciI	CCGC	7 cut(s)	22, 63, 140, 146, 748, 1170, 1751
AclWI	GGATC	5 cut(s)	1053, 1822, 1849, 2550, 2682
AcoI	YGGCCR	1 cut(s)	43
AcsI	RAATTY	4 cut(s)	660, 1337, 2107, 2723
AcuI	CTGAAG	3 cut(s)	1922, 2139, 2439
AcyI	GRCGYC	1 cut(s)	1510
AfaI	GTAC	5 cut(s)	165, 181, 322, 447, 1134
AfiI	CCNNNNNNNGG	3 cut(s)	173, 852, 1675
AflIII	ACRYGT	1 cut(s)	1932
AjnI	CCWGG	4 cut(s)	1037, 1186, 1994, 2593
Alw21I	GWGCWC	2 cut(s)	8, 1932
Alw26I	GTCTC	6 cut(s)	217, 420, 603, 738, 1574, 2135
AlwI	GGATC	5 cut(s)	1053, 1822, 1849, 2550, 2682
AlwNI	CAGNNNCTG	2 cut(s)	1562, 2090
Ama87I	CYCGRG	1 cut(s)	1547
AoxI	GGCC	6 cut(s)	43, 74, 240, 815, 1677, 2293
ApeKI	GCWGC	8 cut(s)	620, 822, 912, 1457, 1562, 1565, 2129, 2642
ApoI	RAATTY	4 cut(s)	660, 1337, 2107, 2723
Asp700I	GAANNNNTTC	3 cut(s)	1290, 1626, 1965
AspA2I	CCTAGG	1 cut(s)	965
AspLEI	GCGC	2 cut(s)	653, 1512
AspS9I	GGNCC	6 cut(s)	241, 538, 815, 1652, 1697, 2293
AsuC2I	CCSGG	2 cut(s)	168, 1261
AsuHPI	GGTGA	8 cut(s)	230, 771, 944, 1011, 1553, 2044, 2273, 2353
AvaI	CYCGRG	1 cut(s)	1547
AvaII	GGWCC	3 cut(s)	538, 1652, 1697
AvrII	CCTAGG	1 cut(s)	965
AxyI	CCTNAGG	1 cut(s)	1515
BaeGI	GKGCMC	3 cut(s)	790, 2100, 2206
BalI	TGGCCA	1 cut(s)	45
BanI	GGYRCC	1 cut(s)	1509
BbsI	GAAGAC	3 cut(s)	339, 868, 1341
Bbv12I	GWGCWC	2 cut(s)	8, 1932
BbvI	GCAGC	8 cut(s)	607, 834, 924, 1444, 1549, 1577, 2141, 2654
BccI	CCATC	5 cut(s)	1009, 1303, 1466, 2453, 2632
BceAI	ACGGC	3 cut(s)	97, 242, 2185
BcgI	CGANNNNNNTGC	2 cut(s)	41, 75
BciT130I	CCWGG	4 cut(s)	1039, 1188, 1996, 2595
BclI	TGATCA	1 cut(s)	2707
BcnI	CCSGG	2 cut(s)	168, 1261
BcoDI	GTCTC	6 cut(s)	217, 420, 603, 738, 1574, 2135
BfaI	CTAG	7 cut(s)	15, 66, 420, 966, 1080, 1712, 2058
BfmI	CTRYAG	1 cut(s)	1563
BfoI	RGCGCY	1 cut(s)	1513
BfuAI	ACCTGC	2 cut(s)	2249, 2376
BlnI	CCTAGG	1 cut(s)	965
BmcAI	AGTACT	1 cut(s)	322
Bme1390I	CCNGG	6 cut(s)	168, 1039, 1188, 1261, 1996, 2595
Bme18I	GGWCC	3 cut(s)	538, 1652, 1697
BmeT110I	CYCGRG	1 cut(s)	1547
BmgT120I	GGNCC	6 cut(s)	241, 538, 815, 1652, 1697, 2293
BmiI	GGNNCC	4 cut(s)	243, 816, 1511, 2536
BmrFI	CCNGG	6 cut(s)	168, 1039, 1188, 1261, 1996, 2595
BmsI	GCATC	6 cut(s)	1067, 1395, 1438, 1850, 2071, 2377
BpiI	GAAGAC	3 cut(s)	339, 868, 1341
BpmI	CTGGAG	4 cut(s)	274, 1209, 1946, 2546
Bpu10I	CCTNAGC	1 cut(s)	101
BpuEI	CTTGAG	2 cut(s)	892, 1428
BpuMI	CCSGG	2 cut(s)	168, 1261
BsaBI	GATNNNNATC	1 cut(s)	2571
BsaHI	GRCGYC	1 cut(s)	1510
BsaI	GGTCTC	1 cut(s)	738
BsaJI	CCNNGG	7 cut(s)	167, 782, 965, 1821, 2320, 2538, 2594
BsaXI	ACNNNNNCTCC	4 cut(s)	1767, 1797, 1919, 1949
Bsc4I	CCNNNNNNNGG	3 cut(s)	173, 852, 1675
Bse1I	ACTGG	3 cut(s)	1543, 1726, 2105
Bse21I	CCTNAGG	1 cut(s)	1515
Bse3DI	GCAATG	3 cut(s)	373, 1146, 2335
Bse8I	GATNNNNATC	1 cut(s)	2571
BseBI	CCWGG	4 cut(s)	1039, 1188, 1996, 2595
BseDI	CCNNGG	7 cut(s)	167, 782, 965, 1821, 2320, 2538, 2594
BseGI	GGATG	5 cut(s)	166, 1001, 1146, 1817, 2643
BseJI	GATNNNNATC	1 cut(s)	2571
BseLI	CCNNNNNNNGG	3 cut(s)	173, 852, 1675
BseMI	GCAATG	3 cut(s)	373, 1146, 2335
BseMII	CTCAG	2 cut(s)	1560, 1632
BseNI	ACTGG	3 cut(s)	1543, 1726, 2105
BseRI	GAGGAG	4 cut(s)	284, 438, 564, 1285
BseSI	GKGCMC	3 cut(s)	790, 2100, 2206
BseXI	GCAGC	8 cut(s)	607, 834, 924, 1444, 1549, 1577, 2141, 2654
Bsh1236I	CGCG	2 cut(s)	651, 750
Bsh1285I	CGRYCG	1 cut(s)	1015
BshFI	GGCC	6 cut(s)	45, 76, 242, 817, 1679, 2295
BshNI	GGYRCC	1 cut(s)	1509
BsiEI	CGRYCG	1 cut(s)	1015
BsiHKAI	GWGCWC	2 cut(s)	8, 1932
BsiHKCI	CYCGRG	1 cut(s)	1547
BsiSI	CCGG	2 cut(s)	167, 1261
BslFI	GGGAC	1 cut(s)	2207
BslI	CCNNNNNNNGG	3 cut(s)	173, 852, 1675
BsmAI	GTCTC	6 cut(s)	217, 420, 603, 738, 1574, 2135
BsmBI	CGTCTC	1 cut(s)	217
BsmFI	GGGAC	1 cut(s)	2207
BsmI	GAATGC	1 cut(s)	1228
BsnI	GGCC	6 cut(s)	45, 76, 242, 817, 1679, 2295
Bso31I	GGTCTC	1 cut(s)	738
BsoBI	CYCGRG	1 cut(s)	1547
Bsp1286I	GDGCHC	5 cut(s)	8, 790, 1932, 2100, 2206
Bsp1407I	TGTACA	1 cut(s)	1132
Bsp19I	CCATGG	1 cut(s)	1821
BspACI	CCGC	7 cut(s)	22, 63, 140, 146, 748, 1170, 1751
BspANI	GGCC	6 cut(s)	45, 76, 242, 817, 1679, 2295
BspCNI	CTCAG	2 cut(s)	1561, 1631
BspFNI	CGCG	2 cut(s)	651, 750
BspLI	GGNNCC	4 cut(s)	243, 816, 1511, 2536
BspMAI	CTGCAG	1 cut(s)	1567
BspMI	ACCTGC	2 cut(s)	2249, 2376
BspPI	GGATC	5 cut(s)	1053, 1822, 1849, 2550, 2682
BspT107I	GGYRCC	1 cut(s)	1509
BspTNI	GGTCTC	1 cut(s)	738
BsrDI	GCAATG	3 cut(s)	373, 1146, 2335
BsrGI	TGTACA	1 cut(s)	1132
BsrI	ACTGG	3 cut(s)	1543, 1726, 2105
BssECI	CCNNGG	7 cut(s)	167, 782, 965, 1821, 2320, 2538, 2594
BssNI	GRCGYC	1 cut(s)	1510
BssT1I	CCWWGG	5 cut(s)	782, 965, 1821, 2320, 2538
Bst2UI	CCWGG	4 cut(s)	1039, 1188, 1996, 2595
Bst4CI	ACNGT	5 cut(s)	1115, 1792, 1944, 2431, 2689
Bst6I	CTCTTC	2 cut(s)	84, 965
BstACI	GRCGYC	1 cut(s)	1510
BstAUI	TGTACA	1 cut(s)	1132
BstC8I	GCNNGC	2 cut(s)	1419, 2034
BstDEI	CTNAG	7 cut(s)	101, 315, 1215, 1515, 1569, 1618, 1907
BstDSI	CCRYGG	1 cut(s)	1821
BstEII	GGTNACC	2 cut(s)	777, 1541
BstF5I	GGATG	5 cut(s)	166, 1001, 1146, 1817, 2643
BstFNI	CGCG	2 cut(s)	651, 750
BstH2I	RGCGCY	1 cut(s)	1513
BstHHI	GCGC	2 cut(s)	653, 1512
BstMAI	GTCTC	6 cut(s)	217, 420, 603, 738, 1574, 2135
BstMCI	CGRYCG	1 cut(s)	1015
BstMWI	GCNNNNNNNGC	4 cut(s)	912, 1169, 1457, 2069
BstNI	CCWGG	4 cut(s)	1039, 1188, 1996, 2595
BstNSI	RCATGY	3 cut(s)	1868, 1936, 2036
BstPI	GGTNACC	2 cut(s)	777, 1541
BstSCI	CCNGG	6 cut(s)	166, 1037, 1186, 1259, 1994, 2593
BstSFI	CTRYAG	1 cut(s)	1563
BstSLI	GKGCMC	3 cut(s)	790, 2100, 2206
BstUI	CGCG	2 cut(s)	651, 750
BstV1I	GCAGC	8 cut(s)	607, 834, 924, 1444, 1549, 1577, 2141, 2654
BstV2I	GAAGAC	3 cut(s)	339, 868, 1341
BstX2I	RGATCY	2 cut(s)	1045, 1854
BstYI	RGATCY	2 cut(s)	1045, 1854
Bsu36I	CCTNAGG	1 cut(s)	1515
BsuRI	GGCC	6 cut(s)	45, 76, 242, 817, 1679, 2295
BtgI	CCRYGG	1 cut(s)	1821
BtsCI	GGATG	5 cut(s)	166, 1001, 1146, 1817, 2643
BtsIMutI	CAGTG	4 cut(s)	1563, 1940, 2098, 2694
BveI	ACCTGC	2 cut(s)	2249, 2376
Cac8I	GCNNGC	2 cut(s)	1419, 2034
CaiI	CAGNNNCTG	2 cut(s)	1562, 2090
CfoI	GCGC	2 cut(s)	653, 1512
Cfr13I	GGNCC	6 cut(s)	241, 538, 815, 1652, 1697, 2293
CseI	GACGC	2 cut(s)	726, 2379
Csp6I	GTAC	5 cut(s)	164, 180, 321, 446, 1133
CviQI	GTAC	5 cut(s)	164, 180, 321, 446, 1133
DdeI	CTNAG	7 cut(s)	101, 315, 1215, 1515, 1569, 1618, 1907
DinI	GGCGCC	1 cut(s)	1511
DraI	TTTAAA	1 cut(s)	2730
EaeI	YGGCCR	1 cut(s)	43
Eam1104I	CTCTTC	2 cut(s)	84, 965
EarI	CTCTTC	2 cut(s)	84, 965
EciI	GGCGGA	1 cut(s)	155
Eco130I	CCWWGG	5 cut(s)	782, 965, 1821, 2320, 2538
Eco147I	AGGCCT	1 cut(s)	76
Eco31I	GGTCTC	1 cut(s)	738
Eco32I	GATATC	1 cut(s)	1602
Eco47I	GGWCC	3 cut(s)	538, 1652, 1697
Eco57I	CTGAAG	3 cut(s)	1922, 2139, 2439
Eco81I	CCTNAGG	1 cut(s)	1515
Eco88I	CYCGRG	1 cut(s)	1547
Eco91I	GGTNACC	2 cut(s)	777, 1541
EcoO109I	RGGNCCY	1 cut(s)	815
EcoO65I	GGTNACC	2 cut(s)	777, 1541
EcoRII	CCWGG	4 cut(s)	1037, 1186, 1994, 2593
EcoRV	GATATC	1 cut(s)	1602
EcoT14I	CCWWGG	5 cut(s)	782, 965, 1821, 2320, 2538
EcoT22I	ATGCAT	2 cut(s)	1060, 1843
EgeI	GGCGCC	1 cut(s)	1511
EheI	GGCGCC	1 cut(s)	1511
ErhI	CCWWGG	5 cut(s)	782, 965, 1821, 2320, 2538
Esp3I	CGTCTC	1 cut(s)	217
FaqI	GGGAC	1 cut(s)	2207
FauI	CCCGC	1 cut(s)	1744
FbaI	TGATCA	1 cut(s)	2707
FblI	GTMKAC	2 cut(s)	896, 1722
FokI	GGATG	5 cut(s)	173, 988, 1153, 1804, 2650
FspBI	CTAG	7 cut(s)	15, 66, 420, 966, 1080, 1712, 2058
GlaI	GCGC	2 cut(s)	652, 1511
GsuI	CTGGAG	4 cut(s)	274, 1209, 1946, 2546
HaeII	RGCGCY	1 cut(s)	1513
HaeIII	GGCC	6 cut(s)	45, 76, 242, 817, 1679, 2295
HapII	CCGG	2 cut(s)	167, 1261
HgaI	GACGC	2 cut(s)	726, 2379
HhaI	GCGC	2 cut(s)	653, 1512
Hin1I	GRCGYC	1 cut(s)	1510
Hin6I	GCGC	2 cut(s)	651, 1510
HinP1I	GCGC	2 cut(s)	651, 1510
HincII	GTYRAC	3 cut(s)	1234, 1528, 1723
HindII	GTYRAC	3 cut(s)	1234, 1528, 1723
HindIII	AAGCTT	4 cut(s)	644, 1743, 1904, 2192
HpaII	CCGG	2 cut(s)	167, 1261
HphI	GGTGA	8 cut(s)	230, 771, 944, 1011, 1553, 2044, 2273, 2353
Hpy166II	GTNNAC	6 cut(s)	897, 1019, 1234, 1528, 1723, 2654
Hpy8I	GTNNAC	6 cut(s)	897, 1019, 1234, 1528, 1723, 2654
Hpy99I	CGWCG	1 cut(s)	53
HpyCH4III	ACNGT	5 cut(s)	1115, 1792, 1944, 2431, 2689
HpyCH4IV	ACGT	2 cut(s)	305, 1530
HpyF10VI	GCNNNNNNNGC	4 cut(s)	912, 1169, 1457, 2069
HpyF3I	CTNAG	7 cut(s)	101, 315, 1215, 1515, 1569, 1618, 1907
HpySE526I	ACGT	2 cut(s)	305, 1530
Hsp92I	GRCGYC	1 cut(s)	1510
HspAI	GCGC	2 cut(s)	651, 1510
KasI	GGCGCC	1 cut(s)	1509
Ksp22I	TGATCA	1 cut(s)	2707
LmnI	GCTCC	2 cut(s)	293, 1927
Lsp1109I	GCAGC	8 cut(s)	607, 834, 924, 1444, 1549, 1577, 2141, 2654
LweI	GCATC	6 cut(s)	1067, 1395, 1438, 1850, 2071, 2377
MaeI	CTAG	7 cut(s)	15, 66, 420, 966, 1080, 1712, 2058
MaeII	ACGT	2 cut(s)	305, 1530
MaeIII	GTNAC	6 cut(s)	777, 1541, 1732, 2050, 2422, 2683
MflI	RGATCY	2 cut(s)	1045, 1854
MhlI	GDGCHC	5 cut(s)	8, 790, 1932, 2100, 2206
MlsI	TGGCCA	1 cut(s)	45
MluNI	TGGCCA	1 cut(s)	45
Mly113I	GGCGCC	1 cut(s)	1510
MlyI	GAGTC	7 cut(s)	380, 467, 494, 944, 991, 1229, 2510
MmeI	TCCRAC	2 cut(s)	246, 354
Mox20I	TGGCCA	1 cut(s)	45
Mph1103I	ATGCAT	2 cut(s)	1060, 1843
MroXI	GAANNNNTTC	3 cut(s)	1290, 1626, 1965
MscI	TGGCCA	1 cut(s)	45
MslI	CAYNNNNRTG	1 cut(s)	591
Msp20I	TGGCCA	1 cut(s)	45
MspA1I	CMGCKG	1 cut(s)	1568
MspI	CCGG	2 cut(s)	167, 1261
MspR9I	CCNGG	6 cut(s)	168, 1039, 1188, 1261, 1996, 2595
Mva1269I	GAATGC	1 cut(s)	1228
MvaI	CCWGG	4 cut(s)	1039, 1188, 1996, 2595
MvnI	CGCG	2 cut(s)	651, 750
MwoI	GCNNNNNNNGC	4 cut(s)	912, 1169, 1457, 2069
NarI	GGCGCC	1 cut(s)	1510
NciI	CCSGG	2 cut(s)	168, 1261
NcoI	CCATGG	1 cut(s)	1821
NlaIV	GGNNCC	4 cut(s)	243, 816, 1511, 2536
NmuCI	GTSAC	4 cut(s)	777, 1541, 2050, 2683
NsiI	ATGCAT	2 cut(s)	1060, 1843
NspI	RCATGY	3 cut(s)	1868, 1936, 2036
PaeI	GCATGC	1 cut(s)	2036
PaqCI	CACCTGC	1 cut(s)	2249
PceI	AGGCCT	1 cut(s)	76
PciI	ACATGT	1 cut(s)	1932
PctI	GAATGC	1 cut(s)	1228
PdmI	GAANNNNTTC	3 cut(s)	1290, 1626, 1965
PfeI	GAWTC	8 cut(s)	206, 635, 686, 710, 983, 1325, 1360, 2087
PfoI	TCCNGGA	1 cut(s)	1186
Ple19I	CGATCG	1 cut(s)	1015
PleI	GAGTC	7 cut(s)	379, 467, 493, 943, 991, 1229, 2510
PluTI	GGCGCC	1 cut(s)	1513
PpsI	GAGTC	7 cut(s)	379, 467, 493, 943, 991, 1229, 2510
PscI	ACATGT	1 cut(s)	1932
Psp6I	CCWGG	4 cut(s)	1037, 1186, 1994, 2593
PspEI	GGTNACC	2 cut(s)	777, 1541
PspGI	CCWGG	4 cut(s)	1037, 1186, 1994, 2593
PspN4I	GGNNCC	4 cut(s)	243, 816, 1511, 2536
PspPI	GGNCC	6 cut(s)	241, 538, 815, 1652, 1697, 2293
PstI	CTGCAG	1 cut(s)	1567
PstNI	CAGNNNCTG	2 cut(s)	1562, 2090
PsuI	RGATCY	2 cut(s)	1045, 1854
PvuI	CGATCG	1 cut(s)	1015
PvuII	CAGCTG	1 cut(s)	1568
RsaI	GTAC	5 cut(s)	165, 181, 322, 447, 1134
RsaNI	GTAC	5 cut(s)	164, 180, 321, 446, 1133
RseI	CAYNNNNRTG	1 cut(s)	591
SalI	GTCGAC	1 cut(s)	1721
Sau96I	GGNCC	6 cut(s)	241, 538, 815, 1652, 1697, 2293
ScaI	AGTACT	1 cut(s)	322
SchI	GAGTC	7 cut(s)	380, 467, 494, 944, 991, 1229, 2510
ScrFI	CCNGG	6 cut(s)	168, 1039, 1188, 1261, 1996, 2595
SduI	GDGCHC	5 cut(s)	8, 790, 1932, 2100, 2206
SfaNI	GCATC	6 cut(s)	1067, 1395, 1438, 1850, 2071, 2377
SfcI	CTRYAG	1 cut(s)	1563
SfoI	GGCGCC	1 cut(s)	1511
SinI	GGWCC	3 cut(s)	538, 1652, 1697
SmiMI	CAYNNNNRTG	1 cut(s)	591
SmlI	CTYRAG	2 cut(s)	907, 1443
SmoI	CTYRAG	2 cut(s)	907, 1443
SphI	GCATGC	1 cut(s)	2036
SseBI	AGGCCT	1 cut(s)	76
SsiI	CCGC	7 cut(s)	22, 63, 140, 146, 748, 1170, 1751
SspDI	GGCGCC	1 cut(s)	1509
SspI	AATATT	1 cut(s)	1291
SspMI	CTAG	7 cut(s)	15, 66, 420, 966, 1080, 1712, 2058
StuI	AGGCCT	1 cut(s)	76
StyD4I	CCNGG	6 cut(s)	166, 1037, 1186, 1259, 1994, 2593
StyI	CCWWGG	5 cut(s)	782, 965, 1821, 2320, 2538
TaaI	ACNGT	5 cut(s)	1115, 1792, 1944, 2431, 2689
TaiI	ACGT	2 cut(s)	308, 1533
TaqI	TCGA	4 cut(s)	476, 1604, 1722, 2589
TaqII	GACCGA	1 cut(s)	765
TatI	WGTACW	3 cut(s)	320, 445, 1132
TauI	GCSGC	2 cut(s)	25, 65
TfiI	GAWTC	8 cut(s)	206, 635, 686, 710, 983, 1325, 1360, 2087
TscAI	CASTG	4 cut(s)	1563, 1947, 2105, 2694
TseFI	GTSAC	4 cut(s)	777, 1541, 2050, 2683
TseI	GCWGC	8 cut(s)	620, 822, 912, 1457, 1562, 1565, 2129, 2642
Tsp45I	GTSAC	4 cut(s)	777, 1541, 2050, 2683
TspDTI	ATGAA	8 cut(s)	42, 102, 573, 1268, 1470, 1579, 2232, 2396
TspGWI	ACGGA	3 cut(s)	344, 1219, 1228
TspRI	CASTG	4 cut(s)	1563, 1947, 2105, 2694
VpaK11BI	GGWCC	3 cut(s)	538, 1652, 1697
XapI	RAATTY	4 cut(s)	660, 1337, 2107, 2723
XbaI	TCTAGA	1 cut(s)	1711
XceI	RCATGY	3 cut(s)	1868, 1936, 2036
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2002
XmaJI	CCTAGG	1 cut(s)	965
XmiI	GTMKAC	2 cut(s)	896, 1722
XmnI	GAANNNNTTC	3 cut(s)	1290, 1626, 1965
XspI	CTAG	7 cut(s)	15, 66, 420, 966, 1080, 1712, 2058
ZrmI	AGTACT	1 cut(s)	322
Zsp2I	ATGCAT	2 cut(s)	1060, 1843

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.