Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0006750

Physical Location & Seq

Genomic Coordinates Forward (+)

3589440 .. 3597332

Gene Structure 7893 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g04160.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1938 bp

ATGAGCACATCGTCTAGTAGGCGGCACAAAAAGGAAGTGCATGACCATGAGGAAGAAAGTGCTGCTAGGACAAGGCCTTTGAGTTATGAAGAGATTATGCTTAGGAGGAAGGATAAGAAGTTGTGTGATAATGTCGTGACAGAAGCTACTGTTGAAAATGTTTCAGAGCCTTTTGAGTCTGGAAGGGGTGAGAGATGGGATAATGATTTGGCCGCTGTTGTTGAAAAGCCTTTGTCGGAGGAGCCGGTAAAGGAAAGCTCCGGAAAGAAAGAAAGATATAGTTCTAAGAGTAGTAAAACGGAAGACGATGTTGTTAAAGGGAGAGTTAGAAGAAGCAATGAGCCAGAGAGCTTGAAGGATAAGCCAAAAAAAGATACAAGAAGTGGAGGTAGAGGAGACAAAACTGACAGAGAAGTACATGGTAGGAGGAAAATTGACAAGGATTCAATTGATGAGTCTGTCAAGAAGCAGTCACGAGATTATTCAACAAGAAAAGAAAGACATTTGGACAGTAGAGGGGAACATGAAAGAGAAACCAAGAGAAAATACCAACATGAAAATGATGAGAAAATCAGAGACAGAAATGCTGCAAAGAAACATGATCCAGGAAAGCTTCGCGCTTTAGAATTTTCAGAGAGAAAGGAGAGGAAAGAATCATCAAAGTCACACTTTGAAGAATCAAGACGTAAAAGGGGAAGATCGTGGAGTAGAGACCGTGGGAATAGACATAGGTTAAGATCTCTCTCACCAAGGGCACACAAACATGCTTCAAATAATTTGGGGCCTCGCAGTGATGTATCATCCCATTCGCTCAAAGATAGGACTGGAAGACAACATTTGGGTATTGATAGTAGTAGAGTGTCTTCTAATGGCTCAAGCAGCCACTATCAGCGACATGATGAGTCTGCAAATAGACTTGGCGGCTATTCCCCTAGGAAGAGAAGGACTGAGTCTGCTATTAAGACTCCATCCCCACCCAATCGTTCACCTGAAAAGAAAAAAGCTAGGTGGGATCCCCCCCTTGCATCAACTGACAAGTCATTATCTAGTTCAGTTGCTTCTCGTTTCCAGTCATCAAACAGTAATGTAACGTCAAATATACATGGGATGGCCATTGCTGTTTCTGTTGCCTCAACCACCACAACATCTATTCCCGGAGTTTCTCCTGATTCTATATTGACTAAGAAAAATGCTTCCATTGACTCTGTCCAATTAACACAAGCCACCCGGCGTATGAGGAGGCTTCATGTAGAAAATATTCCATCTACAACCTCTGAAAGCACTTTGGTAGAATCTCTGAATAATTTTTTGTTATCTTCGGGGGTAAATCATATTCAAGGAACACGACCCTGCATCAGTTGTGTGATTAACAAAGAGAAGGGGCAAGCTCTTGTGGAGTTTCTTACACCTGAAGACGCTTTGGCTGCTCTGGCATTTGATGGCACTTCATTCTTTGGTTCTATTCTCAAAATCAGGCGCCCTAAGGACTTTATTGACGTTGCTACTGGTGACCATGACCCCGAGAAATCAGTGGCTGCAGCTGATGGTATTGTGACAATAAGTGATGTTGTGAATGATTCTCCTAACAAGATTTTCATTGGTGGGATATCAAAGGTTCTTTCCTCAGAAATGCTTCTGGAAATCGTTAGTGTCTTTGGACCTTTGAAGGCATACCATTTTGAGGCCAATGAGGAACTTACTGAACCATATGCTTTTCTAGAGTATGTCGACCAGTCAGTAACTCTCAAAGCCTGTGCGGGTCTGAATGGTATAAAATTGGGAGGGAGAGTGATAACTGTGGTTCAGGCCATTCGTAGTGGATCATCCTCGGTAAATAGTGGAAATGCATCAGTTTATGAGATCCCAGAACATGCAAAGCCGCTTCTCAAACAACCATCACACATCCTAAAGCTTAGAAATGTGGTTTGGTATGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000243 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006810 GO:0006913 GO:0008150 GO:0008152 GO:0008187 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0030628 GO:0031974 GO:0031981 GO:0032239 GO:0032241 GO:0032386 GO:0032388 GO:0032879 GO:0032991 GO:0034641 GO:0036002 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0046822 GO:0046824 GO:0046831 GO:0046833 GO:0046907 GO:0048518 GO:0050789 GO:0051049 GO:0051050 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0060341 GO:0065007 GO:0070013 GO:0071004 GO:0071010 GO:0071704 GO:0089701 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1

Protein Analysis

646

Amino Acids

72.01

Weight (kDa)

9.65

Isoelectric Point (pI)

59.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	531 - 599	8.4e-07	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006750)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33435
fragaria_vesca	FvH4_4g04160 FvH4_4g04160 FvH4_4g04160
malus_domestica	MD13G1218500.v1.1
prunus_persica	Prupe.1G045200_v2.0.a1 Prupe.1G045200_v2.0.a1
pyrus_communis	pycom13g19340
rosa_chinensis	RchiOBHm_Chr4g0394621 RchiOBHm_Chr4g0394661
rosa_laevigata	RLG00000009679 RLG00000009684
rosa_multiflora	Rmu_sc0005424.1_g000012 Rmu_sc0006945.1_g000040
rosa_roxburghii	Rroxscaffold_5G00339670
rosa_rugosa	Rorug03G0363100.1 Rorug03G0363500.1 Rorug03G0363600.1 Rorug03G0363700.1
rosa_samantha	Rh4AG053300 Rh4AG054000 Rh4BG051200 Rh4BG051700 Rh4CG058500 Rh4DG050200
rosa_wichuraiana	Rw4G004300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1476
AccI	GTMKAC	1 cut(s)	1728
AccII	CGCG	1 cut(s)	618
AccIII	TCCGGA	1 cut(s)	260
AciI	CCGC	5 cut(s)	22, 213, 921, 1757, 1880
AclWI	GGATC	5 cut(s)	596, 1007, 1020, 1828, 1855
AcoI	YGGCCR	2 cut(s)	210, 1110
AcsI	RAATTY	1 cut(s)	626
AcuI	CTGAAG	1 cut(s)	1431
AcyI	GRCGYC	1 cut(s)	1477
AfaI	GTAC	1 cut(s)	417
AfiI	CCNNNNNNNGG	1 cut(s)	1681
AgsI	TTSAA	9 cut(s)	155, 224, 355, 447, 486, 674, 771, 1337, 1666
AjnI	CCWGG	1 cut(s)	604
AjuI	GAANNNNNNNTTGG	1 cut(s)	1909
AluBI	AGCT	8 cut(s)	146, 258, 351, 613, 1004, 1388, 1541, 1912
AluI	AGCT	8 cut(s)	146, 258, 351, 613, 1004, 1388, 1541, 1912
Alw21I	GWGCWC	1 cut(s)	8
Alw26I	GTCTC	3 cut(s)	390, 570, 705
AlwI	GGATC	5 cut(s)	596, 1007, 1020, 1828, 1855
AlwNI	CAGNNNCTG	1 cut(s)	1535
Ama87I	CYCGRG	1 cut(s)	1520
Aor13HI	TCCGGA	1 cut(s)	260
AoxI	GGCC	6 cut(s)	74, 210, 782, 1110, 1683, 1806
ApeKI	GCWGC	6 cut(s)	62, 587, 879, 1424, 1535, 1538
ApoI	RAATTY	1 cut(s)	626
ArsI	GACNNNNNNTTYG	2 cut(s)	61, 93
Asp700I	GAANNNNTTC	2 cut(s)	1257, 1632
AspA2I	CCTAGG	1 cut(s)	932
AspLEI	GCGC	2 cut(s)	620, 1479
AspS9I	GGNCC	2 cut(s)	782, 1658
AsuC2I	CCSGG	2 cut(s)	1155, 1228
AsuHPI	GGTGA	4 cut(s)	200, 738, 978, 1520
AvaI	CYCGRG	1 cut(s)	1520
AvaII	GGWCC	1 cut(s)	1658
AvrII	CCTAGG	1 cut(s)	932
AxyI	CCTNAGG	1 cut(s)	1482
BaeGI	GKGCMC	1 cut(s)	757
BalI	TGGCCA	1 cut(s)	1112
BamHI	GGATCC	1 cut(s)	1012
BanI	GGYRCC	1 cut(s)	1476
BarI	GAAGNNNNNNTAC	2 cut(s)	847, 879
BauI	CACGAG	1 cut(s)	474
BbsI	GAAGAC	4 cut(s)	309, 835, 855, 1419
Bbv12I	GWGCWC	1 cut(s)	8
BbvI	GCAGC	6 cut(s)	49, 574, 891, 1411, 1522, 1550
BccI	CCATC	7 cut(s)	189, 976, 1102, 1270, 1433, 1538, 1903
BciT130I	CCWGG	1 cut(s)	606
BcnI	CCSGG	2 cut(s)	1155, 1228
BcoDI	GTCTC	3 cut(s)	390, 570, 705
BfaI	CTAG	6 cut(s)	15, 66, 933, 1005, 1047, 1718
BfmI	CTRYAG	1 cut(s)	1536
BfoI	RGCGCY	1 cut(s)	1480
BglII	AGATCT	1 cut(s)	737
BlnI	CCTAGG	1 cut(s)	932
Bme1390I	CCNGG	3 cut(s)	606, 1155, 1228
Bme18I	GGWCC	1 cut(s)	1658
BmeT110I	CYCGRG	1 cut(s)	1520
BmgT120I	GGNCC	2 cut(s)	782, 1658
BmiI	GGNNCC	4 cut(s)	243, 783, 1014, 1478
BmrFI	CCNGG	3 cut(s)	606, 1155, 1228
BmsI	GCATC	3 cut(s)	1034, 1362, 1856
BpiI	GAAGAC	4 cut(s)	309, 835, 855, 1419
Bpu10I	CCTNAGC	1 cut(s)	101
BpuEI	CTTGAG	1 cut(s)	859
BpuMI	CCSGG	2 cut(s)	1155, 1228
BsaHI	GRCGYC	1 cut(s)	1477
BsaI	GGTCTC	1 cut(s)	705
BsaJI	CCNNGG	4 cut(s)	715, 749, 932, 1827
BsaWI	WCCGGW	1 cut(s)	260
BsaXI	ACNNNNNCTCC	2 cut(s)	1773, 1803
Bsc4I	CCNNNNNNNGG	1 cut(s)	1681
Bse118I	RCCGGY	1 cut(s)	244
Bse1I	ACTGG	4 cut(s)	829, 1069, 1510, 1732
Bse21I	CCTNAGG	1 cut(s)	1482
Bse3DI	GCAATG	2 cut(s)	343, 1113
BseAI	TCCGGA	1 cut(s)	260
BseBI	CCWGG	1 cut(s)	606
BseDI	CCNNGG	4 cut(s)	715, 749, 932, 1827
BseGI	GGATG	5 cut(s)	800, 968, 1113, 1823, 1902
BseLI	CCNNNNNNNGG	1 cut(s)	1681
BseMI	GCAATG	2 cut(s)	343, 1113
BseMII	CTCAG	2 cut(s)	939, 1638
BseNI	ACTGG	4 cut(s)	829, 1069, 1510, 1732
BseRI	GAGGAG	3 cut(s)	254, 408, 1252
BseSI	GKGCMC	1 cut(s)	757
BseXI	GCAGC	6 cut(s)	49, 574, 891, 1411, 1522, 1550
Bsh1236I	CGCG	1 cut(s)	618
BshFI	GGCC	6 cut(s)	76, 212, 784, 1112, 1685, 1808
BshNI	GGYRCC	1 cut(s)	1476
BsiHKAI	GWGCWC	1 cut(s)	8
BsiHKCI	CYCGRG	1 cut(s)	1520
BsiSI	CCGG	4 cut(s)	245, 261, 1155, 1228
BslI	CCNNNNNNNGG	1 cut(s)	1681
BsmAI	GTCTC	3 cut(s)	390, 570, 705
BsnI	GGCC	6 cut(s)	76, 212, 784, 1112, 1685, 1808
Bso31I	GGTCTC	1 cut(s)	705
BsoBI	CYCGRG	1 cut(s)	1520
Bsp1286I	GDGCHC	2 cut(s)	8, 757
Bsp13I	TCCGGA	1 cut(s)	260
Bsp143I	GATC	6 cut(s)	601, 698, 737, 1012, 1820, 1860
BspACI	CCGC	5 cut(s)	22, 213, 921, 1757, 1880
BspANI	GGCC	6 cut(s)	76, 212, 784, 1112, 1685, 1808
BspCNI	CTCAG	2 cut(s)	940, 1637
BspEI	TCCGGA	1 cut(s)	260
BspFNI	CGCG	1 cut(s)	618
BspLI	GGNNCC	4 cut(s)	243, 783, 1014, 1478
BspMAI	CTGCAG	1 cut(s)	1540
BspPI	GGATC	5 cut(s)	596, 1007, 1020, 1828, 1855
BspT107I	GGYRCC	1 cut(s)	1476
BspTNI	GGTCTC	1 cut(s)	705
BsrDI	GCAATG	2 cut(s)	343, 1113
BsrFI	RCCGGY	1 cut(s)	244
BsrI	ACTGG	4 cut(s)	829, 1069, 1510, 1732
BssAI	RCCGGY	1 cut(s)	244
BssECI	CCNNGG	4 cut(s)	715, 749, 932, 1827
BssMI	GATC	6 cut(s)	601, 698, 737, 1012, 1820, 1860
BssNI	GRCGYC	1 cut(s)	1477
BssSI	CACGAG	1 cut(s)	474
BssT1I	CCWWGG	2 cut(s)	749, 932
Bst2BI	CACGAG	1 cut(s)	474
Bst2UI	CCWGG	1 cut(s)	606
Bst4CI	ACNGT	5 cut(s)	151, 512, 716, 1082, 1798
Bst6I	CTCTTC	2 cut(s)	84, 932
BstACI	GRCGYC	1 cut(s)	1477
BstC8I	GCNNGC	1 cut(s)	1386
BstDEI	CTNAG	7 cut(s)	101, 285, 948, 1182, 1482, 1624, 1913
BstDSI	CCRYGG	1 cut(s)	715
BstEII	GGTNACC	1 cut(s)	1508
BstF5I	GGATG	5 cut(s)	800, 968, 1113, 1823, 1902
BstFNI	CGCG	1 cut(s)	618
BstH2I	RGCGCY	1 cut(s)	1480
BstHHI	GCGC	2 cut(s)	620, 1479
BstKTI	GATC	6 cut(s)	604, 701, 740, 1015, 1823, 1863
BstMAI	GTCTC	3 cut(s)	390, 570, 705
BstMBI	GATC	6 cut(s)	601, 698, 737, 1012, 1820, 1860
BstMWI	GCNNNNNNNGC	3 cut(s)	879, 1424, 1430
BstNI	CCWGG	1 cut(s)	606
BstNSI	RCATGY	2 cut(s)	767, 1874
BstPI	GGTNACC	1 cut(s)	1508
BstSCI	CCNGG	3 cut(s)	604, 1153, 1226
BstSFI	CTRYAG	1 cut(s)	1536
BstSLI	GKGCMC	1 cut(s)	757
BstUI	CGCG	1 cut(s)	618
BstV1I	GCAGC	6 cut(s)	49, 574, 891, 1411, 1522, 1550
BstV2I	GAAGAC	4 cut(s)	309, 835, 855, 1419
BstX2I	RGATCY	3 cut(s)	737, 1012, 1860
BstYI	RGATCY	3 cut(s)	737, 1012, 1860
Bsu36I	CCTNAGG	1 cut(s)	1482
BsuRI	GGCC	6 cut(s)	76, 212, 784, 1112, 1685, 1808
BtgI	CCRYGG	1 cut(s)	715
BtsCI	GGATG	5 cut(s)	800, 968, 1113, 1823, 1902
BtsI	GCAGTG	1 cut(s)	796
BtsIMutI	CAGTG	2 cut(s)	796, 1536
Cac8I	GCNNGC	1 cut(s)	1386
CaiI	CAGNNNCTG	1 cut(s)	1535
CfoI	GCGC	2 cut(s)	620, 1479
Cfr10I	RCCGGY	1 cut(s)	244
Cfr13I	GGNCC	2 cut(s)	782, 1658
CseI	GACGC	1 cut(s)	1424
Csp6I	GTAC	1 cut(s)	416
CviQI	GTAC	1 cut(s)	416
DdeI	CTNAG	7 cut(s)	101, 285, 948, 1182, 1482, 1624, 1913
DinI	GGCGCC	1 cut(s)	1478
DpnI	GATC	6 cut(s)	603, 700, 739, 1014, 1822, 1862
DpnII	GATC	6 cut(s)	601, 698, 737, 1012, 1820, 1860
EaeI	YGGCCR	2 cut(s)	210, 1110
Eam1104I	CTCTTC	2 cut(s)	84, 932
EarI	CTCTTC	2 cut(s)	84, 932
Eco130I	CCWWGG	2 cut(s)	749, 932
Eco147I	AGGCCT	1 cut(s)	76
Eco31I	GGTCTC	1 cut(s)	705
Eco32I	GATATC	1 cut(s)	1608
Eco47I	GGWCC	1 cut(s)	1658
Eco57I	CTGAAG	1 cut(s)	1431
Eco81I	CCTNAGG	1 cut(s)	1482
Eco88I	CYCGRG	1 cut(s)	1520
Eco91I	GGTNACC	1 cut(s)	1508
EcoO109I	RGGNCCY	1 cut(s)	782
EcoO65I	GGTNACC	1 cut(s)	1508
EcoRII	CCWGG	1 cut(s)	604
EcoRV	GATATC	1 cut(s)	1608
EcoT14I	CCWWGG	2 cut(s)	749, 932
EcoT22I	ATGCAT	1 cut(s)	1849
EgeI	GGCGCC	1 cut(s)	1478
EheI	GGCGCC	1 cut(s)	1478
ErhI	CCWWGG	2 cut(s)	749, 932
FalI	AAGNNNNNCTT	2 cut(s)	653, 685
FauI	CCCGC	1 cut(s)	1750
FauNDI	CATATG	1 cut(s)	1708
FblI	GTMKAC	1 cut(s)	1728
FokI	GGATG	5 cut(s)	787, 955, 1120, 1810, 1889
FspBI	CTAG	6 cut(s)	15, 66, 933, 1005, 1047, 1718
GlaI	GCGC	2 cut(s)	619, 1478
HaeII	RGCGCY	1 cut(s)	1480
HaeIII	GGCC	6 cut(s)	76, 212, 784, 1112, 1685, 1808
HapII	CCGG	4 cut(s)	245, 261, 1155, 1228
HgaI	GACGC	1 cut(s)	1424
HhaI	GCGC	2 cut(s)	620, 1479
Hin1I	GRCGYC	1 cut(s)	1477
Hin6I	GCGC	2 cut(s)	618, 1477
HinP1I	GCGC	2 cut(s)	618, 1477
HincII	GTYRAC	1 cut(s)	1729
HindII	GTYRAC	1 cut(s)	1729
HindIII	AAGCTT	2 cut(s)	611, 1910
HpaII	CCGG	4 cut(s)	245, 261, 1155, 1228
HphI	GGTGA	4 cut(s)	200, 738, 978, 1520
Hpy166II	GTNNAC	2 cut(s)	986, 1729
Hpy188I	TCNGA	8 cut(s)	166, 238, 575, 634, 1276, 1299, 1627, 1764
Hpy188III	TCNNGA	9 cut(s)	136, 180, 261, 463, 474, 681, 1166, 1637, 1718
Hpy8I	GTNNAC	2 cut(s)	986, 1729
HpyAV	CCTTC	6 cut(s)	103, 177, 349, 936, 1372, 1660
HpyCH4III	ACNGT	5 cut(s)	151, 512, 716, 1082, 1798
HpyCH4IV	ACGT	3 cut(s)	685, 1091, 1497
HpyCH4V	TGCA	8 cut(s)	40, 590, 908, 1025, 1353, 1538, 1847, 1874
HpyF10VI	GCNNNNNNNGC	3 cut(s)	879, 1424, 1430
HpyF3I	CTNAG	7 cut(s)	101, 285, 948, 1182, 1482, 1624, 1913
HpySE526I	ACGT	3 cut(s)	685, 1091, 1497
Hsp92I	GRCGYC	1 cut(s)	1477
HspAI	GCGC	2 cut(s)	618, 1477
KasI	GGCGCC	1 cut(s)	1476
Kpn2I	TCCGGA	1 cut(s)	260
Kzo9I	GATC	6 cut(s)	601, 698, 737, 1012, 1820, 1860
LmnI	GCTCC	2 cut(s)	241, 263
Lsp1109I	GCAGC	6 cut(s)	49, 574, 891, 1411, 1522, 1550
LweI	GCATC	3 cut(s)	1034, 1362, 1856
MaeI	CTAG	6 cut(s)	15, 66, 933, 1005, 1047, 1718
MaeII	ACGT	3 cut(s)	685, 1091, 1497
MaeIII	GTNAC	7 cut(s)	136, 471, 663, 1087, 1508, 1552, 1738
MalI	GATC	6 cut(s)	603, 700, 739, 1014, 1822, 1862
MboI	GATC	6 cut(s)	601, 698, 737, 1012, 1820, 1860
MfeI	CAATTG	1 cut(s)	447
MflI	RGATCY	3 cut(s)	737, 1012, 1860
MhlI	GDGCHC	2 cut(s)	8, 757
MlsI	TGGCCA	1 cut(s)	1112
MluCI	AATT	7 cut(s)	432, 447, 626, 775, 1211, 1303, 1775
MluNI	TGGCCA	1 cut(s)	1112
Mly113I	GGCGCC	1 cut(s)	1477
MlyI	GAGTC	6 cut(s)	185, 464, 911, 958, 959, 1196
MmeI	TCCRAC	1 cut(s)	216
Mox20I	TGGCCA	1 cut(s)	1112
Mph1103I	ATGCAT	1 cut(s)	1849
MroI	TCCGGA	1 cut(s)	260
MroXI	GAANNNNTTC	2 cut(s)	1257, 1632
MscI	TGGCCA	1 cut(s)	1112
MseI	TTAA	6 cut(s)	315, 734, 960, 1214, 1368, 1936
MslI	CAYNNNNRTG	3 cut(s)	45, 558, 762
Msp20I	TGGCCA	1 cut(s)	1112
MspA1I	CMGCKG	2 cut(s)	215, 1541
MspI	CCGG	4 cut(s)	245, 261, 1155, 1228
MspR9I	CCNGG	3 cut(s)	606, 1155, 1228
MunI	CAATTG	1 cut(s)	447
MvaI	CCWGG	1 cut(s)	606
MvnI	CGCG	1 cut(s)	618
MwoI	GCNNNNNNNGC	3 cut(s)	879, 1424, 1430
NarI	GGCGCC	1 cut(s)	1477
NciI	CCSGG	2 cut(s)	1155, 1228
NdeI	CATATG	1 cut(s)	1708
NdeII	GATC	6 cut(s)	601, 698, 737, 1012, 1820, 1860
NlaIV	GGNNCC	4 cut(s)	243, 783, 1014, 1478
NmuCI	GTSAC	5 cut(s)	136, 471, 663, 1508, 1552
NsiI	ATGCAT	1 cut(s)	1849
NspI	RCATGY	2 cut(s)	767, 1874
PceI	AGGCCT	1 cut(s)	76
PdmI	GAANNNNTTC	2 cut(s)	1257, 1632
PfeI	GAWTC	6 cut(s)	443, 653, 677, 1169, 1292, 1577
PflFI	GACNNNGTC	2 cut(s)	949, 1205
PfoI	TCCNGGA	2 cut(s)	604, 1153
PleI	GAGTC	6 cut(s)	184, 463, 910, 958, 958, 1196
PluTI	GGCGCC	1 cut(s)	1480
PpsI	GAGTC	6 cut(s)	184, 463, 910, 958, 958, 1196
Psp6I	CCWGG	1 cut(s)	604
PspEI	GGTNACC	1 cut(s)	1508
PspGI	CCWGG	1 cut(s)	604
PspN4I	GGNNCC	4 cut(s)	243, 783, 1014, 1478
PspPI	GGNCC	2 cut(s)	782, 1658
PstI	CTGCAG	1 cut(s)	1540
PstNI	CAGNNNCTG	1 cut(s)	1535
PsuI	RGATCY	3 cut(s)	737, 1012, 1860
PsyI	GACNNNGTC	2 cut(s)	949, 1205
PvuII	CAGCTG	1 cut(s)	1541
RsaI	GTAC	1 cut(s)	417
RsaNI	GTAC	1 cut(s)	416
RseI	CAYNNNNRTG	3 cut(s)	45, 558, 762
SalI	GTCGAC	1 cut(s)	1727
SaqAI	TTAA	6 cut(s)	315, 734, 960, 1214, 1368, 1936
Sau3AI	GATC	6 cut(s)	601, 698, 737, 1012, 1820, 1860
Sau96I	GGNCC	2 cut(s)	782, 1658
SchI	GAGTC	6 cut(s)	185, 464, 911, 958, 959, 1196
ScrFI	CCNGG	3 cut(s)	606, 1155, 1228
SduI	GDGCHC	2 cut(s)	8, 757
SfaNI	GCATC	3 cut(s)	1034, 1362, 1856
SfcI	CTRYAG	1 cut(s)	1536
SfoI	GGCGCC	1 cut(s)	1478
SinI	GGWCC	1 cut(s)	1658
SmiMI	CAYNNNNRTG	3 cut(s)	45, 558, 762
SmlI	CTYRAG	1 cut(s)	874
SmoI	CTYRAG	1 cut(s)	874
Sse9I	AATT	7 cut(s)	432, 447, 626, 775, 1211, 1303, 1775
SseBI	AGGCCT	1 cut(s)	76
SsiI	CCGC	5 cut(s)	22, 213, 921, 1757, 1880
SspDI	GGCGCC	1 cut(s)	1476
SspI	AATATT	1 cut(s)	1258
SspMI	CTAG	6 cut(s)	15, 66, 933, 1005, 1047, 1718
StuI	AGGCCT	1 cut(s)	76
StyD4I	CCNGG	3 cut(s)	604, 1153, 1226
StyI	CCWWGG	2 cut(s)	749, 932
TaaI	ACNGT	5 cut(s)	151, 512, 716, 1082, 1798
TaiI	ACGT	3 cut(s)	688, 1094, 1500
TaqI	TCGA	1 cut(s)	1728
TasI	AATT	7 cut(s)	432, 447, 626, 775, 1211, 1303, 1775
TatI	WGTACW	1 cut(s)	415
TauI	GCSGC	4 cut(s)	25, 215, 924, 1882
TfiI	GAWTC	6 cut(s)	443, 653, 677, 1169, 1292, 1577
Tru1I	TTAA	6 cut(s)	315, 734, 960, 1214, 1368, 1936
Tru9I	TTAA	6 cut(s)	315, 734, 960, 1214, 1368, 1936
TscAI	CASTG	2 cut(s)	796, 1536
TseFI	GTSAC	5 cut(s)	136, 471, 663, 1508, 1552
TseI	GCWGC	6 cut(s)	62, 587, 879, 1424, 1535, 1538
Tsp45I	GTSAC	5 cut(s)	136, 471, 663, 1508, 1552
TspDTI	ATGAA	6 cut(s)	102, 540, 570, 1235, 1437, 1585
TspGWI	ACGGA	1 cut(s)	314
TspRI	CASTG	2 cut(s)	796, 1536
Tth111I	GACNNNGTC	2 cut(s)	949, 1205
VpaK11BI	GGWCC	1 cut(s)	1658
XapI	RAATTY	1 cut(s)	626
XbaI	TCTAGA	1 cut(s)	1717
XceI	RCATGY	2 cut(s)	767, 1874
XmaJI	CCTAGG	1 cut(s)	932
XmiI	GTMKAC	1 cut(s)	1728
XmnI	GAANNNNTTC	2 cut(s)	1257, 1632
XspI	CTAG	6 cut(s)	15, 66, 933, 1005, 1047, 1718
Zsp2I	ATGCAT	1 cut(s)	1849

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.