AT2G33670

May be involved in modulation of pathogen defense and leaf cell death

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0010739
Physical Location & Seq
Forward (+)
14244951 .. 14248155
3205 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G33670.1

Sequence Viewer

Length: 1506 bp
ATGGCTGGAGGAGGAGGTGGTAGCACTTCTGGAGAAGGTCCTAGAGAGCTCGATCAGACACCGACATGGGCCGTCTCCACTGTTTGTGGCGTTATCATCTTGATCTCTATCGTTCTAGAGCTCATGATTCACAAAATCGGAGAGGTTTTCACTGAAAGAAGGAAGAAAGCTTTGTACGAAGCGCTTCAAAAGATCAAGAACGAGCTTATGGTTTTGGGATTCATTTCTTTGTTATTAACATTTGGACAAAACTACATAGCAAGTTTGTGTGTGGCGTCAAGATACGGCCATGCGATGTCCTTTTGTGGTCCATACGATGGTCCAAGTGGTGAGTCTAAGAAGCCAAAGACTACCGAACACTTAGAACGTCGTGTTTTGGCTGATGCTGCTCCAGCTCAGTGCAAGAAGGGCTATGTACCGCTTATATCACTCAACGCGTTGCATCAAGTGCATATCTTCATCTTTTTCTTGGCTGTGTTTCATGTCATTTATAGTGCTATTACCATGATGCTTGGACGAGCAAAGATTCGTGGATGGAAAGTTTGGGAGGAAGAAGTCATAAATGATCATGAAATGATGAATGACCCTTCAAGGTTTAGGCTCACACATGAGACATCATTTGTTAGAGAGCATGTCAATCCTTGGGCCAAAAATAGATTCTCATTCTACGTTATGTGTTTCTTTCGTCAAATGCTGAGATCTGTCAGAAAATCTGATTATTTGACAATGCGTCATGGTTTCATAAGTGTCCATTTGGCACCGGGTATGAAGTTTAATTTCCAAAAATACATCAAAAGATCATTGGAAGACGACTTCAAGGTAGTCGTGGGAATAAGTCCCGAGCTATGGGCCTTTGTAATGCTCTTTTTGCTCTTTGATGTTCACGGGTGGTATGTTACTGCTGTGATCACCATGATTCCTCCACTTTTGACATTAGCGATAGGAACCAAGCTTCAAGCCATCATCTCAGACATGGCGTTGGAAATTCAGGAGAGACACGCCGTGATACAAGGGATGCCACTTGTCAATGTCTCTGATCGACATTTCTGGTTTAGTCGTCCCGCCTTAGTCCTCCATATCATCCACTTCATTCTCTTCCAGAATGCTTTTGAGATCACCTACTTCTTCTGGATATGGTATGAGTTCGGGTTACGGTCCTGTTTTCATCACCATTTCGCGCTAATAATCATAAGGGTTGCTCTTGGGGTGGGAGTACAATTTCTCTGCAGTTACATCACACTTCCTCTTTACGCTCTCGTGACTCAGATGGGATCAACGATGAAGCGATCGGTGTTTGATGATCAAACGTCAAAGGCATTAAAGAATTGGCATAAAAATGCAAAGAAAAAGAGCGAAACTCCTGGTCAAACGCAGCCTCCATTGCCTAATCTCCGACCTAAAACCGGCGGCGATATTGAGTCTGCTTCTCCGGCCAATATCACGGCTAGTGTTGATGTTAAAGAAAGTGATCAATCTCAATCTAGAGACCTCTTAAGCGGTCCCTAA

Protein Analysis

501

Amino Acids

56.9

Weight (kDa)

9.2

Isoelectric Point (pI)

41.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mlo PF03094 15 - 457 9.8e-202 Mlo family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010739)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42560 AT1G42560 AT2G33670
fragaria_vesca FvH4_5g25860 FvH4_5g25860
malus_domestica MD06G1005800.v1.1 MD10G1233000.v1.1 MD11G1034900.v1.1 MD17G1274600.v1.1
prunus_persica Prupe.5G007100_v2.0.a1
pyrus_communis pycom04g09600 pycom05g07420
rosa_chinensis RchiOBHm_Chr7g0216341
rosa_laevigata RLG00000002580
rosa_roxburghii Rroxscaffold_3G00243310
rosa_rugosa Rorug07G0160000
rosa_samantha Rh7AG297500 Rh7CG317700 Rh7DG299900
rosa_wichuraiana Rw7G025310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 757
AccB7I CCANNNNNTGG 1 cut(s) 317
AccII CGCG 2 cut(s) 437, 1178
AciI CCGC 4 cut(s) 419, 1062, 1407, 1497
AclWI GGATC 1 cut(s) 1279
AcoI YGGCCR 2 cut(s) 286, 1431
AcsI RAATTY 1 cut(s) 984
AcyI GRCGYC 1 cut(s) 275
AdeI CACNNNGTG 1 cut(s) 1003
AfaI GTAC 3 cut(s) 176, 417, 1215
AfeI AGCGCT 1 cut(s) 183
AfiI CCNNNNNNNGG 3 cut(s) 317, 846, 1403
AflII CTTAAG 1 cut(s) 1492
AflIII ACRYGT 1 cut(s) 435
AgsI TTSAA 4 cut(s) 188, 591, 817, 956
AhdI GACNNNNNGTC 1 cut(s) 729
AjnI CCWGG 1 cut(s) 1360
AjuI GAANNNNNNNTTGG 2 cut(s) 641, 673
AluBI AGCT 7 cut(s) 49, 121, 170, 205, 395, 844, 952
AluI AGCT 7 cut(s) 49, 121, 170, 205, 395, 844, 952
Alw21I GWGCWC 2 cut(s) 51, 123
Alw26I GTCTC 5 cut(s) 79, 605, 988, 1036, 1479
AlwI GGATC 1 cut(s) 1279
Ama87I CYCGRG 1 cut(s) 839
Aor51HI AGCGCT 1 cut(s) 183
AoxI GGCC 5 cut(s) 69, 286, 645, 849, 1431
ApeKI GCWGC 2 cut(s) 386, 1372
ApoI RAATTY 1 cut(s) 984
Asp700I GAANNNNTTC 1 cut(s) 183
AspLEI GCGC 2 cut(s) 184, 1180
AspS9I GGNCC 8 cut(s) 38, 69, 308, 320, 645, 849, 1155, 1499
AsuC2I CCSGG 1 cut(s) 762
AsuHPI GGTGA 4 cut(s) 341, 901, 1108, 1160
AvaI CYCGRG 1 cut(s) 839
AvaII GGWCC 5 cut(s) 38, 308, 320, 1155, 1499
BanI GGYRCC 1 cut(s) 757
BanII GRGCYC 2 cut(s) 51, 123
BauI CACGAG 1 cut(s) 1256
BbsI GAAGAC 1 cut(s) 813
Bbv12I GWGCWC 2 cut(s) 51, 123
BbvI GCAGC 2 cut(s) 373, 1384
BccI CCATC 4 cut(s) 311, 528, 968, 1261
BceAI ACGGC 4 cut(s) 56, 301, 986, 1458
BciT130I CCWGG 1 cut(s) 1362
BclI TGATCA 4 cut(s) 565, 906, 1300, 1468
BcnI CCSGG 1 cut(s) 762
BcoDI GTCTC 5 cut(s) 79, 605, 988, 1036, 1479
BfaI CTAG 4 cut(s) 42, 116, 1446, 1482
BfmI CTRYAG 1 cut(s) 1225
BfoI RGCGCY 1 cut(s) 185
BfrI CTTAAG 1 cut(s) 1492
BglII AGATCT 1 cut(s) 698
BisI GCNGC 3 cut(s) 387, 1373, 1408
BlsI GCNGC 3 cut(s) 388, 1374, 1409
Bme1390I CCNGG 2 cut(s) 762, 1362
Bme18I GGWCC 5 cut(s) 38, 308, 320, 1155, 1499
BmeRI GACNNNNNGTC 1 cut(s) 729
BmeT110I CYCGRG 1 cut(s) 839
BmgT120I GGNCC 8 cut(s) 38, 69, 308, 320, 645, 849, 1155, 1499
BmiI GGNNCC 3 cut(s) 759, 946, 1501
BmrFI CCNGG 2 cut(s) 762, 1362
BmsI GCATC 4 cut(s) 373, 451, 498, 1005
BpiI GAAGAC 1 cut(s) 813
BplI GAGNNNNNCTC 2 cut(s) 1342, 1374
BpmI CTGGAG 3 cut(s) 27, 51, 375
BpuMI CCSGG 1 cut(s) 762
BsaBI GATNNNNATC 1 cut(s) 107
BsaHI GRCGYC 1 cut(s) 275
BsaI GGTCTC 1 cut(s) 1479
BsaJI CCNNGG 1 cut(s) 641
BsaXI ACNNNNNCTCC 2 cut(s) 1360, 1390
Bsc4I CCNNNNNNNGG 3 cut(s) 317, 846, 1403
Bse118I RCCGGY 1 cut(s) 1403
Bse3DI GCAATG 1 cut(s) 1379
Bse8I GATNNNNATC 1 cut(s) 107
BseBI CCWGG 1 cut(s) 1362
BseDI CCNNGG 1 cut(s) 641
BseGI GGATG 3 cut(s) 539, 1020, 1080
BseJI GATNNNNATC 1 cut(s) 107
BseLI CCNNNNNNNGG 3 cut(s) 317, 846, 1403
BseMI GCAATG 1 cut(s) 1379
BseMII CTCAG 4 cut(s) 410, 686, 981, 1277
BseRI GAGGAG 2 cut(s) 24, 27
BseXI GCAGC 2 cut(s) 373, 1384
Bsh1236I CGCG 2 cut(s) 437, 1178
Bsh1285I CGRYCG 1 cut(s) 1289
BshFI GGCC 5 cut(s) 71, 288, 647, 851, 1433
BshNI GGYRCC 1 cut(s) 757
BsiEI CGRYCG 1 cut(s) 1289
BsiHKAI GWGCWC 2 cut(s) 51, 123
BsiHKCI CYCGRG 1 cut(s) 839
BsiSI CCGG 3 cut(s) 761, 1404, 1430
BslFI GGGAC 3 cut(s) 822, 1044, 1485
BslI CCNNNNNNNGG 3 cut(s) 317, 846, 1403
BsmAI GTCTC 5 cut(s) 79, 605, 988, 1036, 1479
BsmBI CGTCTC 1 cut(s) 79
BsmFI GGGAC 3 cut(s) 822, 1044, 1485
BsmI GAATGC 1 cut(s) 1108
BsnI GGCC 5 cut(s) 71, 288, 647, 851, 1433
Bso31I GGTCTC 1 cut(s) 1479
BsoBI CYCGRG 1 cut(s) 839
Bsp1286I GDGCHC 2 cut(s) 51, 123
BspACI CCGC 4 cut(s) 419, 1062, 1407, 1497
BspANI GGCC 5 cut(s) 71, 288, 647, 851, 1433
BspCNI CTCAG 4 cut(s) 409, 687, 980, 1276
BspFNI CGCG 2 cut(s) 437, 1178
BspHI TCATGA 2 cut(s) 123, 568
BspLI GGNNCC 3 cut(s) 759, 946, 1501
BspMAI CTGCAG 1 cut(s) 1229
BspPI GGATC 1 cut(s) 1279
BspT107I GGYRCC 1 cut(s) 757
BspTI CTTAAG 1 cut(s) 1492
BspTNI GGTCTC 1 cut(s) 1479
BsrDI GCAATG 1 cut(s) 1379
BsrFI RCCGGY 1 cut(s) 1403
BssAI RCCGGY 1 cut(s) 1403
BssECI CCNNGG 1 cut(s) 641
BssNI GRCGYC 1 cut(s) 275
BssSI CACGAG 1 cut(s) 1256
BssT1I CCWWGG 1 cut(s) 641
Bst2BI CACGAG 1 cut(s) 1256
Bst2UI CCWGG 1 cut(s) 1362
Bst4CI ACNGT 2 cut(s) 82, 1155
Bst6I CTCTTC 1 cut(s) 1100
BstACI GRCGYC 1 cut(s) 275
BstAFI CTTAAG 1 cut(s) 1492
BstAPI GCANNNNNTGC 1 cut(s) 448
BstDEI CTNAG 7 cut(s) 336, 361, 396, 695, 967, 1066, 1263
BstF5I GGATG 3 cut(s) 539, 1020, 1080
BstFNI CGCG 2 cut(s) 437, 1178
BstH2I RGCGCY 1 cut(s) 185
BstHHI GCGC 2 cut(s) 184, 1180
BstMAI GTCTC 5 cut(s) 79, 605, 988, 1036, 1479
BstMCI CGRYCG 1 cut(s) 1289
BstMWI GCNNNNNNNGC 7 cut(s) 386, 392, 408, 448, 868, 1381, 1430
BstNI CCWGG 1 cut(s) 1362
BstNSI RCATGY 1 cut(s) 635
BstSCI CCNGG 2 cut(s) 760, 1360
BstSFI CTRYAG 1 cut(s) 1225
BstUI CGCG 2 cut(s) 437, 1178
BstV1I GCAGC 2 cut(s) 373, 1384
BstV2I GAAGAC 1 cut(s) 813
BstX2I RGATCY 1 cut(s) 698
BstYI RGATCY 1 cut(s) 698
BsuRI GGCC 5 cut(s) 71, 288, 647, 851, 1433
BtgZI GCGATG 1 cut(s) 308
BtsCI GGATG 3 cut(s) 539, 1020, 1080
BtsIMutI CAGTG 3 cut(s) 78, 150, 404
CciI TCATGA 2 cut(s) 123, 568
CfoI GCGC 2 cut(s) 184, 1180
Cfr10I RCCGGY 1 cut(s) 1403
Cfr13I GGNCC 8 cut(s) 38, 69, 308, 320, 645, 849, 1155, 1499
CseI GACGC 2 cut(s) 264, 719
Csp6I GTAC 3 cut(s) 175, 416, 1214
CviQI GTAC 3 cut(s) 175, 416, 1214
DdeI CTNAG 7 cut(s) 336, 361, 396, 695, 967, 1066, 1263
DraIII CACNNNGTG 1 cut(s) 1003
DriI GACNNNNNGTC 1 cut(s) 729
EaeI YGGCCR 2 cut(s) 286, 1431
Eam1104I CTCTTC 1 cut(s) 1100
Eam1105I GACNNNNNGTC 1 cut(s) 729
EarI CTCTTC 1 cut(s) 1100
Ecl136II GAGCTC 2 cut(s) 49, 121
Eco130I CCWWGG 1 cut(s) 641
Eco24I GRGCYC 2 cut(s) 51, 123
Eco31I GGTCTC 1 cut(s) 1479
Eco47I GGWCC 5 cut(s) 38, 308, 320, 1155, 1499
Eco47III AGCGCT 1 cut(s) 183
Eco53kI GAGCTC 2 cut(s) 49, 121
Eco88I CYCGRG 1 cut(s) 839
EcoICRI GAGCTC 2 cut(s) 49, 121
EcoO109I RGGNCCY 1 cut(s) 38
EcoRII CCWGG 1 cut(s) 1360
EcoT14I CCWWGG 1 cut(s) 641
EcoT38I GRGCYC 2 cut(s) 51, 123
ErhI CCWWGG 1 cut(s) 641
Esp3I CGTCTC 1 cut(s) 79
FaqI GGGAC 3 cut(s) 822, 1044, 1485
FauI CCCGC 1 cut(s) 1069
FbaI TGATCA 4 cut(s) 565, 906, 1300, 1468
Fnu4HI GCNGC 3 cut(s) 387, 1373, 1408
FokI GGATG 3 cut(s) 546, 1027, 1067
FriOI GRGCYC 2 cut(s) 51, 123
Fsp4HI GCNGC 3 cut(s) 387, 1373, 1408
FspBI CTAG 4 cut(s) 42, 116, 1446, 1482
GlaI GCGC 2 cut(s) 183, 1179
GluI GCNGC 3 cut(s) 387, 1373, 1408
GsuI CTGGAG 3 cut(s) 27, 51, 375
HaeII RGCGCY 1 cut(s) 185
HaeIII GGCC 5 cut(s) 71, 288, 647, 851, 1433
HapII CCGG 3 cut(s) 761, 1404, 1430
HgaI GACGC 2 cut(s) 264, 719
HhaI GCGC 2 cut(s) 184, 1180
Hin1I GRCGYC 1 cut(s) 275
Hin6I GCGC 2 cut(s) 182, 1178
HinP1I GCGC 2 cut(s) 182, 1178
HindIII AAGCTT 2 cut(s) 168, 950
HinfI GANTC 8 cut(s) 127, 219, 332, 526, 657, 916, 1261, 1418
HpaII CCGG 3 cut(s) 761, 1404, 1430
HphI GGTGA 4 cut(s) 341, 901, 1108, 1160
Hpy166II GTNNAC 1 cut(s) 883
Hpy188I TCNGA 8 cut(s) 57, 140, 707, 715, 970, 1036, 1266, 1394
Hpy8I GTNNAC 1 cut(s) 883
Hpy99I CGWCG 1 cut(s) 372
HpyAV CCTTC 4 cut(s) 29, 153, 400, 597
HpyCH4III ACNGT 2 cut(s) 82, 1155
HpyCH4IV ACGT 3 cut(s) 367, 669, 1307
HpyCH4V TGCA 5 cut(s) 402, 442, 451, 1227, 1340
HpyF10VI GCNNNNNNNGC 7 cut(s) 386, 392, 408, 448, 868, 1381, 1430
HpyF3I CTNAG 7 cut(s) 336, 361, 396, 695, 967, 1066, 1263
HpySE526I ACGT 3 cut(s) 367, 669, 1307
Hsp92I GRCGYC 1 cut(s) 275
HspAI GCGC 2 cut(s) 182, 1178
Ksp22I TGATCA 4 cut(s) 565, 906, 1300, 1468
LmnI GCTCC 1 cut(s) 394
Lsp1109I GCAGC 2 cut(s) 373, 1384
LweI GCATC 4 cut(s) 373, 451, 498, 1005
MaeI CTAG 4 cut(s) 42, 116, 1446, 1482
MaeII ACGT 3 cut(s) 367, 669, 1307
MaeIII GTNAC 4 cut(s) 895, 1149, 1229, 1258
MboII GAAGA 6 cut(s) 175, 448, 563, 818, 1087, 1117
MflI RGATCY 1 cut(s) 698
MhlI GDGCHC 2 cut(s) 51, 123
MluCI AATT 4 cut(s) 775, 984, 1217, 1324
MluI ACGCGT 1 cut(s) 435
MlyI GAGTC 3 cut(s) 341, 1255, 1427
MmeI TCCRAC 2 cut(s) 960, 1417
MnlI CCTC 9 cut(s) 5, 8, 136, 541, 930, 1082, 1254, 1386, 1499
MroXI GAANNNNTTC 1 cut(s) 183
MseI TTAA 5 cut(s) 236, 774, 1319, 1458, 1493
MslI CAYNNNNRTG 2 cut(s) 64, 1335
MspCI CTTAAG 1 cut(s) 1492
MspI CCGG 3 cut(s) 761, 1404, 1430
MspR9I CCNGG 2 cut(s) 762, 1362
Mva1269I GAATGC 1 cut(s) 1108
MvaI CCWGG 1 cut(s) 1362
MvnI CGCG 2 cut(s) 437, 1178
MwoI GCNNNNNNNGC 7 cut(s) 386, 392, 408, 448, 868, 1381, 1430
NciI CCSGG 1 cut(s) 762
NlaIV GGNNCC 3 cut(s) 759, 946, 1501
NmuCI GTSAC 1 cut(s) 1258
NspI RCATGY 1 cut(s) 635
PagI TCATGA 2 cut(s) 123, 568
PctI GAATGC 1 cut(s) 1108
PdmI GAANNNNTTC 1 cut(s) 183
PfeI GAWTC 5 cut(s) 127, 219, 526, 657, 916
PflMI CCANNNNNTGG 1 cut(s) 317
PkrI GCNGC 3 cut(s) 388, 1374, 1409
Ple19I CGATCG 1 cut(s) 1289
PleI GAGTC 3 cut(s) 340, 1255, 1426
PpsI GAGTC 3 cut(s) 340, 1255, 1426
PpuMI RGGWCCY 1 cut(s) 38
Psp124BI GAGCTC 2 cut(s) 51, 123
Psp5II RGGWCCY 1 cut(s) 38
Psp6I CCWGG 1 cut(s) 1360
PspGI CCWGG 1 cut(s) 1360
PspN4I GGNNCC 3 cut(s) 759, 946, 1501
PspPI GGNCC 8 cut(s) 38, 69, 308, 320, 645, 849, 1155, 1499
PspPPI RGGWCCY 1 cut(s) 38
PstI CTGCAG 1 cut(s) 1229
PsuI RGATCY 1 cut(s) 698
PvuI CGATCG 1 cut(s) 1289
RsaI GTAC 3 cut(s) 176, 417, 1215
RsaNI GTAC 3 cut(s) 175, 416, 1214
RseI CAYNNNNRTG 2 cut(s) 64, 1335
SacI GAGCTC 2 cut(s) 51, 123
SaqAI TTAA 5 cut(s) 236, 774, 1319, 1458, 1493
SatI GCNGC 3 cut(s) 387, 1373, 1408
Sau96I GGNCC 8 cut(s) 38, 69, 308, 320, 645, 849, 1155, 1499
SchI GAGTC 3 cut(s) 341, 1255, 1427
ScrFI CCNGG 2 cut(s) 762, 1362
SduI GDGCHC 2 cut(s) 51, 123
SfaNI GCATC 4 cut(s) 373, 451, 498, 1005
SfcI CTRYAG 1 cut(s) 1225
SinI GGWCC 5 cut(s) 38, 308, 320, 1155, 1499
SmiMI CAYNNNNRTG 2 cut(s) 64, 1335
SmlI CTYRAG 1 cut(s) 1492
SmoI CTYRAG 1 cut(s) 1492
Sse9I AATT 4 cut(s) 775, 984, 1217, 1324
SsiI CCGC 4 cut(s) 419, 1062, 1407, 1497
SspMI CTAG 4 cut(s) 42, 116, 1446, 1482
SstI GAGCTC 2 cut(s) 51, 123
StyD4I CCNGG 2 cut(s) 760, 1360
StyI CCWWGG 1 cut(s) 641
TaaI ACNGT 2 cut(s) 82, 1155
TaiI ACGT 3 cut(s) 370, 672, 1310
TaqI TCGA 2 cut(s) 51, 1039
TasI AATT 4 cut(s) 775, 984, 1217, 1324
TatI WGTACW 1 cut(s) 1213
TauI GCSGC 1 cut(s) 1410
TfiI GAWTC 5 cut(s) 127, 219, 526, 657, 916
Tru1I TTAA 5 cut(s) 236, 774, 1319, 1458, 1493
Tru9I TTAA 5 cut(s) 236, 774, 1319, 1458, 1493
TscAI CASTG 3 cut(s) 85, 157, 404
TseFI GTSAC 1 cut(s) 1258
TseI GCWGC 2 cut(s) 386, 1372
Tsp45I GTSAC 1 cut(s) 1258
TspRI CASTG 3 cut(s) 85, 157, 404
Van91I CCANNNNNTGG 1 cut(s) 317
Vha464I CTTAAG 1 cut(s) 1492
VpaK11BI GGWCC 5 cut(s) 38, 308, 320, 1155, 1499
XapI RAATTY 1 cut(s) 984
XbaI TCTAGA 2 cut(s) 115, 1481
XceI RCATGY 1 cut(s) 635
XmnI GAANNNNTTC 1 cut(s) 183
XspI CTAG 4 cut(s) 42, 116, 1446, 1482
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.