Prupe.5G007100_v2.0.a1

May be involved in modulation of pathogen defense and leaf cell death

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0010739
Physical Location & Seq
Reverse (-)
758145 .. 762410
4266 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G007100.1

Sequence Viewer

Length: 1515 bp
ATGGCCGGCGGAGGGGGTGGAGGCAGGGAGCTGGATCAGACGCCAACGTGGGCTCTGGCCACCGTCTGTTTCATTATCATTATTATTTCCATCGTTTTGGAAAAGGTTCTTCATATGATCGGACATTGGTTTGAACATAGAAAAAAGAGTGGATTGCTTGAAGCTCTTGAGAAAGTGAAAGGAGAGCTTATGGTTTTGGGATTTATTTCTCTGTTGCTAACATTTGGGCAACAGTACATCGCTAAAGTGTGTATTCCGATAGAGGCAGCAGACACAATGTTGCCTTGCCCATACAGAGGGGAAGAGAAAGAAGGAGGTGGTGGTGGTGGAGATCATCGTCGCAGGCTTTTATGGTATGAACGCAGATATTTAGCTGGTGGTGGCGATGGTCCAGGCTGCAAGGAGGGAAAAGTGCCGCTCATATCTACAAATGGATTACATCAATTGCACATCTTCATATTCTTTTTAGCAATATTTCACGTTGTATACGGTGCCATAACCATGACACTTGGAAGATTAAAGATTCGTGCGTGGAAGGTATGGGAACGAGAGATGGAACATGATAATGAATTCAATGATCCTACAAAATTCAGGCTTACTCACGAGACATCATTTGTTAGAGATCACACAAGATGTTGGACTAAAAACCCATTTACCTTCTATTTTGTAAGCTTTCTTCGACAATTCTTTAGGTCCGTCCGCAGGGCCGACTACTTGACCATGCGACATGGATTCGTCACGGTTCATTTAGCACCTGGAAGTAAGTTTGACTTTCAAAAGTATATCAAAAGGTCATTAGAAGATGACTTTAAGGTAGTTGTGGGAATCAGTCCACTGTTGTGGACTTCAATGGTTCTCTACCTGCTTCTCAATGTTCATGGATGGGAGGCTATGTTTGTGCTGTCCATACTTCCTCTTGTTATAATATTAGCTGTTGGAACAAAGCTGCAAGCAATTATATCTCAAATGGCACTTGAGATCCAAGAAAGACATGCTGTAGTCCAAGGGATACCTCTGGTGCAAGTCTCAGACAAGCATTTCTGGTTTAGCTGGCCTCAGTTAGTTCTTTATTTGATCCATTTTGTCCTGTTTCAGAATGCATTTGAGATAACATATTTCTTTTGGATATGGTACGAGTTTGGGATAAGATCTTGTTTCCATGATAATTTCGTTCTTACAGTACTCAGAGTTGCACTTGGGGTATGCGTCCAAGTTATGTGCAGCTACATCACACTTCCCCTATATGCATTGGTTACGCAGATGGGATCAACAATGAAGAAGTCAATCTTTGATGAACAAACTAACAAAGCTTTAAAGAAATGGCAAAAGAATGCTGCTGCAAAGAAGAAGAATGACGGGAAGCCGGCAGCTAAAGCCAGTGTCGATTCAGTAACAAAGGCTCCACAAAAGGCTGAAATGGAAAAAGGTCCATCAACTCCTGAACAGACGGCAAACATCATGGCCAGTGTAGATATTCAAGGCAACACGAAAGACCTCCTAACAGGAGGACCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0008150 GO:0016020 GO:0044464 GO:0050896 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mlo

Protein Analysis

505

Amino Acids

57.25

Weight (kDa)

9.17

Isoelectric Point (pI)

28.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010739)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G42560 AT1G42560 AT2G33670
fragaria_vesca FvH4_5g25860 FvH4_5g25860
malus_domestica MD06G1005800.v1.1 MD10G1233000.v1.1 MD11G1034900.v1.1 MD17G1274600.v1.1
prunus_persica Prupe.5G007100_v2.0.a1
pyrus_communis pycom04g09600 pycom05g07420
rosa_chinensis RchiOBHm_Chr7g0216341
rosa_laevigata RLG00000002580
rosa_roxburghii Rroxscaffold_3G00243310
rosa_rugosa Rorug07G0160000
rosa_samantha Rh7AG297500 Rh7CG317700 Rh7DG299900
rosa_wichuraiana Rw7G025310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 923
Acc36I ACCTGC 1 cut(s) 870
AccB1I GGYRCC 1 cut(s) 491
AccBSI CCGCTC 1 cut(s) 418
AccI GTMKAC 1 cut(s) 486
AciI CCGC 3 cut(s) 9, 416, 700
AclWI GGATC 5 cut(s) 42, 572, 973, 1069, 1273
AcoI YGGCCR 3 cut(s) 3, 57, 1461
AcsI RAATTY 2 cut(s) 569, 587
AcyI GRCGYC 1 cut(s) 41
AfaI GTAC 3 cut(s) 236, 1133, 1182
AfiI CCNNNNNNNGG 3 cut(s) 12, 296, 702
AgsI TTSAA 6 cut(s) 134, 161, 574, 776, 849, 1478
AjnI CCWGG 2 cut(s) 391, 754
AleI CACNNNNGTG 1 cut(s) 838
Alw26I GTCTC 2 cut(s) 599, 1030
AlwI GGATC 5 cut(s) 42, 572, 973, 1069, 1273
AoxI GGCC 5 cut(s) 3, 57, 705, 1052, 1461
ApeKI GCWGC 7 cut(s) 266, 396, 946, 1221, 1334, 1337, 1367
ApoI RAATTY 2 cut(s) 569, 587
Asp700I GAANNNNTTC 1 cut(s) 105
AspS9I GGNCC 5 cut(s) 389, 693, 705, 1427, 1508
AvaII GGWCC 4 cut(s) 389, 693, 1427, 1508
BalI TGGCCA 2 cut(s) 59, 1463
BanI GGYRCC 1 cut(s) 491
BanII GRGCYC 1 cut(s) 55
BarI GAAGNNNNNNTAC 2 cut(s) 660, 692
BauI CACGAG 1 cut(s) 602
BbvI GCAGC 7 cut(s) 278, 383, 933, 1233, 1321, 1324, 1379
BccI CCATC 6 cut(s) 98, 380, 547, 876, 1255, 1438
BceAI ACGGC 1 cut(s) 1464
BciT130I CCWGG 2 cut(s) 393, 756
BciVI GTATCC 1 cut(s) 1002
BcoDI GTCTC 2 cut(s) 599, 1030
BfmI CTRYAG 1 cut(s) 996
BfuAI ACCTGC 1 cut(s) 870
BfuI GTATCC 1 cut(s) 1002
BglII AGATCT 1 cut(s) 1148
BisI GCNGC 8 cut(s) 267, 397, 416, 947, 1222, 1335, 1338, 1368
BlsI GCNGC 8 cut(s) 268, 398, 417, 948, 1223, 1336, 1339, 1369
BmcAI AGTACT 1 cut(s) 1182
Bme1390I CCNGG 2 cut(s) 393, 756
Bme18I GGWCC 4 cut(s) 389, 693, 1427, 1508
BmgT120I GGNCC 5 cut(s) 389, 693, 705, 1427, 1508
BmiI GGNNCC 2 cut(s) 493, 1401
BmrFI CCNGG 2 cut(s) 393, 756
BpuEI CTTGAG 2 cut(s) 188, 995
BsaHI GRCGYC 1 cut(s) 41
BsaJI CCNNGG 1 cut(s) 1003
BsaXI ACNNNNNCTCC 4 cut(s) 878, 908, 1384, 1414
Bsc4I CCNNNNNNNGG 3 cut(s) 12, 296, 702
Bse118I RCCGGY 2 cut(s) 5, 1363
Bse1I ACTGG 2 cut(s) 1377, 1464
BseBI CCWGG 2 cut(s) 393, 756
BseDI CCNNGG 1 cut(s) 1003
BseGI GGATG 1 cut(s) 887
BseLI CCNNNNNNNGG 3 cut(s) 12, 296, 702
BseMII CTCAG 3 cut(s) 1041, 1070, 1198
BseNI ACTGG 2 cut(s) 1377, 1464
BseXI GCAGC 7 cut(s) 278, 383, 933, 1233, 1321, 1324, 1379
BsgI GTGCAG 1 cut(s) 1240
BshFI GGCC 5 cut(s) 5, 59, 707, 1054, 1463
BshNI GGYRCC 1 cut(s) 491
BsiSI CCGG 2 cut(s) 6, 1364
BslI CCNNNNNNNGG 3 cut(s) 12, 296, 702
BsmAI GTCTC 2 cut(s) 599, 1030
BsmI GAATGC 2 cut(s) 1102, 1336
BsnI GGCC 5 cut(s) 5, 59, 707, 1054, 1463
Bsp1286I GDGCHC 1 cut(s) 55
Bsp143I GATC 9 cut(s) 34, 117, 331, 577, 622, 978, 1074, 1148, 1265
BspACI CCGC 3 cut(s) 9, 416, 700
BspANI GGCC 5 cut(s) 5, 59, 707, 1054, 1463
BspCNI CTCAG 3 cut(s) 1040, 1069, 1197
BspLI GGNNCC 2 cut(s) 493, 1401
BspMI ACCTGC 1 cut(s) 870
BspPI GGATC 5 cut(s) 42, 572, 973, 1069, 1273
BspT107I GGYRCC 1 cut(s) 491
BsrBI CCGCTC 1 cut(s) 418
BsrFI RCCGGY 2 cut(s) 5, 1363
BsrI ACTGG 2 cut(s) 1377, 1464
BssAI RCCGGY 2 cut(s) 5, 1363
BssECI CCNNGG 1 cut(s) 1003
BssMI GATC 9 cut(s) 34, 117, 331, 577, 622, 978, 1074, 1148, 1265
BssNAI GTATAC 1 cut(s) 487
BssNI GRCGYC 1 cut(s) 41
BssSI CACGAG 1 cut(s) 602
BssT1I CCWWGG 1 cut(s) 1003
Bst1107I GTATAC 1 cut(s) 487
Bst2BI CACGAG 1 cut(s) 602
Bst2UI CCWGG 2 cut(s) 393, 756
Bst4CI ACNGT 6 cut(s) 64, 234, 491, 742, 837, 1180
Bst6I CTCTTC 1 cut(s) 297
BstACI GRCGYC 1 cut(s) 41
BstC8I GCNNGC 5 cut(s) 7, 344, 951, 1052, 1365
BstDEI CTNAG 3 cut(s) 1027, 1056, 1184
BstF5I GGATG 1 cut(s) 887
BstKTI GATC 9 cut(s) 37, 120, 334, 580, 625, 981, 1077, 1151, 1268
BstMAI GTCTC 2 cut(s) 599, 1030
BstMBI GATC 9 cut(s) 34, 117, 331, 577, 622, 978, 1074, 1148, 1265
BstMWI GCNNNNNNNGC 1 cut(s) 1373
BstNI CCWGG 2 cut(s) 393, 756
BstNSI RCATGY 1 cut(s) 995
BstSCI CCNGG 2 cut(s) 391, 754
BstSFI CTRYAG 1 cut(s) 996
BstV1I GCAGC 7 cut(s) 278, 383, 933, 1233, 1321, 1324, 1379
BstX2I RGATCY 2 cut(s) 978, 1148
BstXI CCANNNNNNTGG 2 cut(s) 97, 840
BstYI RGATCY 2 cut(s) 978, 1148
BstZ17I GTATAC 1 cut(s) 487
BsuI GTATCC 1 cut(s) 1002
BsuRI GGCC 5 cut(s) 5, 59, 707, 1054, 1463
BtgZI GCGATG 2 cut(s) 223, 399
BtsCI GGATG 1 cut(s) 887
BtsIMutI CAGTG 3 cut(s) 833, 1384, 1471
BveI ACCTGC 1 cut(s) 870
Cac8I GCNNGC 5 cut(s) 7, 344, 951, 1052, 1365
Cfr10I RCCGGY 2 cut(s) 5, 1363
Cfr13I GGNCC 5 cut(s) 389, 693, 705, 1427, 1508
CseI GACGC 2 cut(s) 49, 1195
Csp6I GTAC 3 cut(s) 235, 1132, 1181
CviAII CATG 9 cut(s) 502, 560, 721, 728, 878, 992, 1160, 1459, 1512
CviQI GTAC 3 cut(s) 235, 1132, 1181
DdeI CTNAG 3 cut(s) 1027, 1056, 1184
DpnI GATC 9 cut(s) 36, 119, 333, 579, 624, 980, 1076, 1150, 1267
DpnII GATC 9 cut(s) 34, 117, 331, 577, 622, 978, 1074, 1148, 1265
DraI TTTAAA 1 cut(s) 1314
EaeI YGGCCR 3 cut(s) 3, 57, 1461
Eam1104I CTCTTC 1 cut(s) 297
EarI CTCTTC 1 cut(s) 297
EciI GGCGGA 1 cut(s) 24
Eco130I CCWWGG 1 cut(s) 1003
Eco24I GRGCYC 1 cut(s) 55
Eco47I GGWCC 4 cut(s) 389, 693, 1427, 1508
EcoRI GAATTC 1 cut(s) 569
EcoRII CCWGG 2 cut(s) 391, 754
EcoT14I CCWWGG 1 cut(s) 1003
EcoT22I ATGCAT 2 cut(s) 1102, 1249
EcoT38I GRGCYC 1 cut(s) 55
ErhI CCWWGG 1 cut(s) 1003
FaeI CATG 9 cut(s) 505, 563, 724, 731, 881, 995, 1163, 1462, 1515
FalI AAGNNNNNCTT 6 cut(s) 171, 203, 755, 787, 1271, 1303
FatI CATG 9 cut(s) 501, 559, 720, 727, 877, 991, 1159, 1458, 1511
FauNDI CATATG 1 cut(s) 114
FblI GTMKAC 1 cut(s) 486
Fnu4HI GCNGC 8 cut(s) 267, 397, 416, 947, 1222, 1335, 1338, 1368
FokI GGATG 1 cut(s) 894
FriOI GRGCYC 1 cut(s) 55
Fsp4HI GCNGC 8 cut(s) 267, 397, 416, 947, 1222, 1335, 1338, 1368
GluI GCNGC 8 cut(s) 267, 397, 416, 947, 1222, 1335, 1338, 1368
HaeIII GGCC 5 cut(s) 5, 59, 707, 1054, 1463
HapII CCGG 2 cut(s) 6, 1364
HgaI GACGC 2 cut(s) 49, 1195
Hin1I GRCGYC 1 cut(s) 41
Hin1II CATG 9 cut(s) 505, 563, 724, 731, 881, 995, 1163, 1462, 1515
HindIII AAGCTT 2 cut(s) 670, 1308
HinfI GANTC 4 cut(s) 523, 732, 825, 1385
HpaII CCGG 2 cut(s) 6, 1364
Hpy166II GTNNAC 3 cut(s) 487, 833, 843
Hpy188I TCNGA 6 cut(s) 39, 122, 258, 1030, 1095, 1187
Hpy188III TCNNGA 3 cut(s) 167, 602, 1439
Hpy8I GTNNAC 3 cut(s) 487, 833, 843
Hpy99I CGWCG 1 cut(s) 342
HpyAV CCTTC 3 cut(s) 305, 529, 667
HpyCH4III ACNGT 6 cut(s) 64, 234, 491, 742, 837, 1180
HpyCH4IV ACGT 2 cut(s) 47, 480
HpyCH4V TGCA 9 cut(s) 399, 448, 949, 1021, 1100, 1193, 1221, 1247, 1340
HpyF10VI GCNNNNNNNGC 1 cut(s) 1373
HpyF3I CTNAG 3 cut(s) 1027, 1056, 1184
HpySE526I ACGT 2 cut(s) 47, 480
Hsp92I GRCGYC 1 cut(s) 41
Hsp92II CATG 9 cut(s) 505, 563, 724, 731, 881, 995, 1163, 1462, 1515
KroI GCCGGC 2 cut(s) 5, 1363
KroNI GCCGGC 2 cut(s) 7, 1365
Kzo9I GATC 9 cut(s) 34, 117, 331, 577, 622, 978, 1074, 1148, 1265
LmnI GCTCC 2 cut(s) 28, 1405
Lsp1109I GCAGC 7 cut(s) 278, 383, 933, 1233, 1321, 1324, 1379
MaeII ACGT 2 cut(s) 47, 480
MaeIII GTNAC 3 cut(s) 736, 1252, 1390
MalI GATC 9 cut(s) 36, 119, 333, 579, 624, 980, 1076, 1150, 1267
MbiI CCGCTC 1 cut(s) 418
MboI GATC 9 cut(s) 34, 117, 331, 577, 622, 978, 1074, 1148, 1265
MboII GAAGA 9 cut(s) 101, 314, 445, 525, 668, 812, 1288, 1357, 1360
MfeI CAATTG 1 cut(s) 443
MflI RGATCY 2 cut(s) 978, 1148
MhlI GDGCHC 1 cut(s) 55
MlsI TGGCCA 2 cut(s) 59, 1463
MluCI AATT 6 cut(s) 443, 569, 587, 683, 954, 1165
MluNI TGGCCA 2 cut(s) 59, 1463
MmeI TCCRAC 2 cut(s) 617, 916
Mox20I TGGCCA 2 cut(s) 59, 1463
Mph1103I ATGCAT 2 cut(s) 1102, 1249
MroNI GCCGGC 2 cut(s) 5, 1363
MroXI GAANNNNTTC 1 cut(s) 105
MscI TGGCCA 2 cut(s) 59, 1463
MseI TTAA 3 cut(s) 518, 810, 1313
MslI CAYNNNNRTG 3 cut(s) 500, 564, 838
Msp20I TGGCCA 2 cut(s) 59, 1463
MspI CCGG 2 cut(s) 6, 1364
MspR9I CCNGG 2 cut(s) 393, 756
MunI CAATTG 1 cut(s) 443
Mva1269I GAATGC 2 cut(s) 1102, 1336
MvaI CCWGG 2 cut(s) 393, 756
MwoI GCNNNNNNNGC 1 cut(s) 1373
NaeI GCCGGC 2 cut(s) 7, 1365
NdeI CATATG 1 cut(s) 114
NdeII GATC 9 cut(s) 34, 117, 331, 577, 622, 978, 1074, 1148, 1265
NgoMIV GCCGGC 2 cut(s) 5, 1363
NlaIII CATG 9 cut(s) 505, 563, 724, 731, 881, 995, 1163, 1462, 1515
NlaIV GGNNCC 2 cut(s) 493, 1401
NmuCI GTSAC 1 cut(s) 736
NsiI ATGCAT 2 cut(s) 1102, 1249
NspI RCATGY 1 cut(s) 995
OliI CACNNNNGTG 1 cut(s) 838
PctI GAATGC 2 cut(s) 1102, 1336
PdiI GCCGGC 2 cut(s) 7, 1365
PdmI GAANNNNTTC 1 cut(s) 105
PfeI GAWTC 4 cut(s) 523, 732, 825, 1385
PkrI GCNGC 8 cut(s) 268, 398, 417, 948, 1223, 1336, 1339, 1369
PsiI TTATAA 1 cut(s) 923
Psp6I CCWGG 2 cut(s) 391, 754
PspGI CCWGG 2 cut(s) 391, 754
PspN4I GGNNCC 2 cut(s) 493, 1401
PspPI GGNCC 5 cut(s) 389, 693, 705, 1427, 1508
PsuI RGATCY 2 cut(s) 978, 1148
RsaI GTAC 3 cut(s) 236, 1133, 1182
RsaNI GTAC 3 cut(s) 235, 1132, 1181
RseI CAYNNNNRTG 3 cut(s) 500, 564, 838
SaqAI TTAA 3 cut(s) 518, 810, 1313
SatI GCNGC 8 cut(s) 267, 397, 416, 947, 1222, 1335, 1338, 1368
Sau3AI GATC 9 cut(s) 34, 117, 331, 577, 622, 978, 1074, 1148, 1265
Sau96I GGNCC 5 cut(s) 389, 693, 705, 1427, 1508
ScaI AGTACT 1 cut(s) 1182
ScrFI CCNGG 2 cut(s) 393, 756
SduI GDGCHC 1 cut(s) 55
SfcI CTRYAG 1 cut(s) 996
SinI GGWCC 4 cut(s) 389, 693, 1427, 1508
SmiMI CAYNNNNRTG 3 cut(s) 500, 564, 838
SmlI CTYRAG 2 cut(s) 167, 974
SmoI CTYRAG 2 cut(s) 167, 974
Sse9I AATT 6 cut(s) 443, 569, 587, 683, 954, 1165
SsiI CCGC 3 cut(s) 9, 416, 700
SspI AATATT 2 cut(s) 474, 927
StyD4I CCNGG 2 cut(s) 391, 754
StyI CCWWGG 1 cut(s) 1003
TaaI ACNGT 6 cut(s) 64, 234, 491, 742, 837, 1180
TaiI ACGT 2 cut(s) 50, 483
TaqI TCGA 2 cut(s) 679, 1383
TasI AATT 6 cut(s) 443, 569, 587, 683, 954, 1165
TatI WGTACW 2 cut(s) 234, 1180
TauI GCSGC 1 cut(s) 418
TfiI GAWTC 4 cut(s) 523, 732, 825, 1385
Tru1I TTAA 3 cut(s) 518, 810, 1313
Tru9I TTAA 3 cut(s) 518, 810, 1313
TscAI CASTG 3 cut(s) 840, 1384, 1471
TseFI GTSAC 1 cut(s) 736
TseI GCWGC 7 cut(s) 266, 396, 946, 1221, 1334, 1337, 1367
Tsp45I GTSAC 1 cut(s) 736
TspDTI ATGAA 9 cut(s) 61, 101, 372, 445, 582, 734, 866, 1289, 1308
TspGWI ACGGA 1 cut(s) 685
TspRI CASTG 3 cut(s) 840, 1384, 1471
VpaK11BI GGWCC 4 cut(s) 389, 693, 1427, 1508
XapI RAATTY 2 cut(s) 569, 587
XceI RCATGY 1 cut(s) 995
XmiI GTMKAC 1 cut(s) 486
XmnI GAANNNNTTC 1 cut(s) 105
ZrmI AGTACT 1 cut(s) 1182
Zsp2I ATGCAT 2 cut(s) 1102, 1249
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.