Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0013251

Physical Location & Seq

Genomic Coordinates Forward (+)

14629986 .. 14632082

Gene Structure 2097 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G34690.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 621 bp

ATGGCGGATTCGGAAGCAGATAAGCCACTGAGAAAAATCTCAGCCGCTTTCAAAAAACTAGCAATCATCGTGAATTCACCGAATCCGGAAGTTCCTGTAACGCAATTCTCTCACGCTTGCTCTCTGGTCTCGCCTCTCTTTGGTTGCCTTGGAATAGCTTTTAAGTTTGCGGAAATGGACTATGTTGCCAAGGTTGATGATCTTGTGAGGGCGTCGAGTTCGATATCGACATTAGTGGTAATGATGGACAAAGATATTGAGGCAGATTGTGTAAGGAAAGCTGGTAGTCATACGAGAAACCTTTTGAGGGTTAAGCGTGGTCTTGACATGGTCAAAGTTCTCTTTGAACAGATCATAGCTTCCGAAGGAGATAACTCCTTGAAGGATCCAGCAACTAAGTCTTATGCTCAAGTGTTTGCTCCCCACCATGGATGGGCTATACGGAAAGCTGTTTCTCTTGGGATGTATGCTCTTCCCACAAGGGCTCACCTACTTAATATGCTCAAAGAGGATGAGGCGGCGGCTAAGATACATATGCAAAGCTATGTCAATTCATCGGCACCATTAATCACGTATCTTGATAATCTATTCCTCTCCAAGCAACTCGGTATTGATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0005215 GO:0005319 GO:0005488 GO:0006810 GO:0006811 GO:0006812 GO:0006869 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008219 GO:0008289 GO:0008324 GO:0008519 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009816 GO:0009987 GO:0010033 GO:0010175 GO:0010876 GO:0014070 GO:0015075 GO:0015101 GO:0015166 GO:0015318 GO:0015665 GO:0015695 GO:0015696 GO:0015791 GO:0015850 GO:0016043 GO:0022857 GO:0033036 GO:0034220 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0045087 GO:0046624 GO:0046677 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0051861 GO:0055085 GO:0061024 GO:0071702 GO:0071705 GO:0071840 GO:0072488 GO:0097367 GO:0098542 GO:0098655 GO:0120009 GO:0120013 GO:1901618 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GLTP

Protein Analysis

206

Amino Acids

22.68

Weight (kDa)

8.38

Isoelectric Point (pI)

31.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GLTP	PF08718	31 - 169	8.1e-41	Glycolipid transfer protein (GLTP)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0013251)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34690
fragaria_vesca	FvH4_3g09960
malus_domestica	MD05G1274400.v1.1 MD10G1254100.v1.1
prunus_persica	Prupe.4G089300_v2.0.a1
pyrus_communis	pycom10g20980
rosa_chinensis	RchiOBHm_Chr5g0015711
rosa_laevigata	RLG00000032221
rosa_multiflora	Rmu_sc0000843.1_g000010 Rmu_sc0002323.1_g000008
rosa_roxburghii	Rroxscaffold_1G00060810
rosa_rugosa	Rorug03G0120200 Rorug05G0029400
rosa_samantha	Rh3DG177800 Rh5AG122700 Rh5CG132100 Rh5DG120700
rosa_wichuraiana	Rw5G010590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	559
AccIII	TCCGGA	1 cut(s)	85
AciI	CCGC	5 cut(s)	5, 45, 170, 518, 521
AclWI	GGATC	2 cut(s)	380, 393
AcsI	RAATTY	1 cut(s)	73
AcyI	GRCGYC	1 cut(s)	212
AfiI	CCNNNNNNNGG	4 cut(s)	140, 307, 428, 433
AgsI	TTSAA	3 cut(s)	52, 347, 382
AluBI	AGCT	5 cut(s)	158, 281, 359, 449, 543
AluI	AGCT	5 cut(s)	158, 281, 359, 449, 543
Alw26I	GTCTC	1 cut(s)	133
AlwI	GGATC	2 cut(s)	380, 393
Aor13HI	TCCGGA	1 cut(s)	85
ApoI	RAATTY	1 cut(s)	73
AseI	ATTAAT	1 cut(s)	566
AsuHPI	GGTGA	2 cut(s)	69, 479
BamHI	GGATCC	1 cut(s)	385
BanI	GGYRCC	1 cut(s)	559
BanII	GRGCYC	1 cut(s)	487
BccI	CCATC	2 cut(s)	238, 426
BcoDI	GTCTC	1 cut(s)	133
BfaI	CTAG	1 cut(s)	59
BisI	GCNGC	3 cut(s)	45, 519, 522
BlsI	GCNGC	3 cut(s)	46, 520, 523
BmiI	GGNNCC	2 cut(s)	387, 561
BpuEI	CTTGAG	1 cut(s)	393
BsaAI	YACGTR	1 cut(s)	573
BsaHI	GRCGYC	1 cut(s)	212
BsaI	GGTCTC	1 cut(s)	133
BsaJI	CCNNGG	3 cut(s)	148, 189, 427
BsaWI	WCCGGW	1 cut(s)	85
Bsc4I	CCNNNNNNNGG	4 cut(s)	140, 307, 428, 433
BseAI	TCCGGA	1 cut(s)	85
BseDI	CCNNGG	3 cut(s)	148, 189, 427
BseGI	GGATG	3 cut(s)	437, 468, 517
BseLI	CCNNNNNNNGG	4 cut(s)	140, 307, 428, 433
BseMII	CTCAG	2 cut(s)	20, 54
BshNI	GGYRCC	1 cut(s)	559
BsiSI	CCGG	1 cut(s)	86
BslI	CCNNNNNNNGG	4 cut(s)	140, 307, 428, 433
BsmAI	GTCTC	1 cut(s)	133
Bso31I	GGTCTC	1 cut(s)	133
Bsp1286I	GDGCHC	1 cut(s)	487
Bsp13I	TCCGGA	1 cut(s)	85
Bsp143I	GATC	3 cut(s)	199, 351, 385
Bsp19I	CCATGG	1 cut(s)	427
BspACI	CCGC	5 cut(s)	5, 45, 170, 518, 521
BspCNI	CTCAG	2 cut(s)	21, 53
BspEI	TCCGGA	1 cut(s)	85
BspLI	GGNNCC	2 cut(s)	387, 561
BspPI	GGATC	2 cut(s)	380, 393
BspQI	GCTCTTC	1 cut(s)	477
BspT107I	GGYRCC	1 cut(s)	559
BspTNI	GGTCTC	1 cut(s)	133
BssECI	CCNNGG	3 cut(s)	148, 189, 427
BssMI	GATC	3 cut(s)	199, 351, 385
BssNI	GRCGYC	1 cut(s)	212
BssT1I	CCWWGG	3 cut(s)	148, 189, 427
Bst6I	CTCTTC	1 cut(s)	477
BstACI	GRCGYC	1 cut(s)	212
BstBAI	YACGTR	1 cut(s)	573
BstC8I	GCNNGC	1 cut(s)	118
BstDEI	CTNAG	4 cut(s)	29, 40, 396, 525
BstDSI	CCRYGG	1 cut(s)	427
BstF5I	GGATG	3 cut(s)	437, 468, 517
BstKTI	GATC	3 cut(s)	202, 354, 388
BstMAI	GTCTC	1 cut(s)	133
BstMBI	GATC	3 cut(s)	199, 351, 385
BstX2I	RGATCY	1 cut(s)	385
BstYI	RGATCY	1 cut(s)	385
BtgI	CCRYGG	1 cut(s)	427
BtsCI	GGATG	3 cut(s)	437, 468, 517
BtsIMutI	CAGTG	1 cut(s)	26
Cac8I	GCNNGC	1 cut(s)	118
CseI	GACGC	1 cut(s)	201
CviAII	CATG	2 cut(s)	328, 428
DdeI	CTNAG	4 cut(s)	29, 40, 396, 525
DpnI	GATC	3 cut(s)	201, 353, 387
DpnII	GATC	3 cut(s)	199, 351, 385
Eam1104I	CTCTTC	1 cut(s)	477
EarI	CTCTTC	1 cut(s)	477
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	3 cut(s)	148, 189, 427
Eco24I	GRGCYC	1 cut(s)	487
Eco31I	GGTCTC	1 cut(s)	133
Eco32I	GATATC	1 cut(s)	225
EcoRI	GAATTC	1 cut(s)	73
EcoRV	GATATC	1 cut(s)	225
EcoT14I	CCWWGG	3 cut(s)	148, 189, 427
EcoT38I	GRGCYC	1 cut(s)	487
ErhI	CCWWGG	3 cut(s)	148, 189, 427
FaeI	CATG	2 cut(s)	331, 431
FatI	CATG	2 cut(s)	327, 427
FauNDI	CATATG	1 cut(s)	534
Fnu4HI	GCNGC	3 cut(s)	45, 519, 522
FokI	GGATG	3 cut(s)	444, 475, 524
FriOI	GRGCYC	1 cut(s)	487
Fsp4HI	GCNGC	3 cut(s)	45, 519, 522
FspBI	CTAG	1 cut(s)	59
GluI	GCNGC	3 cut(s)	45, 519, 522
HapII	CCGG	1 cut(s)	86
HgaI	GACGC	1 cut(s)	201
Hin1I	GRCGYC	1 cut(s)	212
Hin1II	CATG	2 cut(s)	331, 431
HinfI	GANTC	2 cut(s)	8, 82
HpaII	CCGG	1 cut(s)	86
HphI	GGTGA	2 cut(s)	69, 479
Hpy188I	TCNGA	2 cut(s)	13, 364
Hpy188III	TCNNGA	4 cut(s)	70, 86, 323, 578
Hpy99I	CGWCG	1 cut(s)	217
HpyAV	CCTTC	2 cut(s)	359, 376
HpyCH4IV	ACGT	1 cut(s)	572
HpyCH4V	TGCA	1 cut(s)	538
HpyF3I	CTNAG	4 cut(s)	29, 40, 396, 525
HpySE526I	ACGT	1 cut(s)	572
Hsp92I	GRCGYC	1 cut(s)	212
Hsp92II	CATG	2 cut(s)	331, 431
Kpn2I	TCCGGA	1 cut(s)	85
Kzo9I	GATC	3 cut(s)	199, 351, 385
LguI	GCTCTTC	1 cut(s)	477
LmnI	GCTCC	1 cut(s)	424
LpnPI	CCDG	5 cut(s)	99, 108, 110, 267, 402
MaeI	CTAG	1 cut(s)	59
MaeII	ACGT	1 cut(s)	572
MaeIII	GTNAC	1 cut(s)	97
MalI	GATC	3 cut(s)	201, 353, 387
MboI	GATC	3 cut(s)	199, 351, 385
MboII	GAAGA	1 cut(s)	464
MflI	RGATCY	1 cut(s)	385
MhlI	GDGCHC	1 cut(s)	487
MluCI	AATT	3 cut(s)	73, 104, 550
MnlI	CCTC	7 cut(s)	144, 201, 253, 300, 502, 508, 602
MroI	TCCGGA	1 cut(s)	85
MseI	TTAA	4 cut(s)	162, 312, 495, 566
MspI	CCGG	1 cut(s)	86
NcoI	CCATGG	1 cut(s)	427
NdeI	CATATG	1 cut(s)	534
NdeII	GATC	3 cut(s)	199, 351, 385
NlaIII	CATG	2 cut(s)	331, 431
NlaIV	GGNNCC	2 cut(s)	387, 561
PciSI	GCTCTTC	1 cut(s)	477
PfeI	GAWTC	2 cut(s)	8, 82
PflFI	GACNNNGTC	1 cut(s)	329
PkrI	GCNGC	3 cut(s)	46, 520, 523
Ppu21I	YACGTR	1 cut(s)	573
PshBI	ATTAAT	1 cut(s)	566
PspN4I	GGNNCC	2 cut(s)	387, 561
PsuI	RGATCY	1 cut(s)	385
PsyI	GACNNNGTC	1 cut(s)	329
SapI	GCTCTTC	1 cut(s)	477
SaqAI	TTAA	4 cut(s)	162, 312, 495, 566
SatI	GCNGC	3 cut(s)	45, 519, 522
Sau3AI	GATC	3 cut(s)	199, 351, 385
SduI	GDGCHC	1 cut(s)	487
SetI	ASST	9 cut(s)	160, 195, 283, 303, 361, 451, 492, 545, 575
SmlI	CTYRAG	1 cut(s)	408
SmoI	CTYRAG	1 cut(s)	408
Sse9I	AATT	3 cut(s)	73, 104, 550
SsiI	CCGC	5 cut(s)	5, 45, 170, 518, 521
SspMI	CTAG	1 cut(s)	59
StyI	CCWWGG	3 cut(s)	148, 189, 427
TaiI	ACGT	1 cut(s)	575
TaqI	TCGA	3 cut(s)	215, 221, 227
TasI	AATT	3 cut(s)	73, 104, 550
TauI	GCSGC	3 cut(s)	47, 521, 524
TfiI	GAWTC	2 cut(s)	8, 82
Tru1I	TTAA	4 cut(s)	162, 312, 495, 566
Tru9I	TTAA	4 cut(s)	162, 312, 495, 566
TscAI	CASTG	1 cut(s)	33
TspDTI	ATGAA	1 cut(s)	543
TspGWI	ACGGA	1 cut(s)	457
TspRI	CASTG	1 cut(s)	33
Tth111I	GACNNNGTC	1 cut(s)	329
VspI	ATTAAT	1 cut(s)	566
XapI	RAATTY	1 cut(s)	73
XspI	CTAG	1 cut(s)	59

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.