AT2G34830
WRKY Family

Transcription factor

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
14693696 .. 14696803
3108 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G34830.2

Sequence Viewer

Length: 1284 bp
ATGGACAACTTCCAAGGAGATCTAACAGACGTCGTACGAGGAATAGGATCAGGCCACGTGTCACCATCTCCTGGACCACCGGAAGGTCCATCTCCGAGCAGCATGTCTCCGCCGCCAACATCAGATCTCCACGTGGAATTCCCCTCCGCCGCTACTTCTGCCAGCTGTCTCGCAAATCCCTTCGGAGACCCGTTCGTAAGCATGAAGGATCCTCTCATCCACCTCCCGGCCAGCTACATCTCCGGCGCCGGTGATAATAAAAGCAACAAAAGTTTTGCAATCTTTCCAAAGATTTTTGAGGATGATCATATTAAGAGTCAATGCAGTGTCTTCCCAAGAATTAAGATCTCGCAAAGTAACAATATCCACGATGCCTCCACGTGTAATTCTCCGGCCATAACCGTCTCCTCTGCCGCCGTAGCAGCTTCGCCGTGGGGCATGATCAACGTTAATACCACTAACAGTCCAAGAAACTGTTTACTTGTCGATAATAATAACAACACGTCATCATGCTCACAGGTTCAGATCTCTTCTTCCCCTCGGAATCTCGGAATTAAGAGAAGGAAGAGCCAGGCAAAGAAAGTGGTGTGCATACCGGCTCCAGCCGCTATGAACAGCCGGTCCAGTGGAGAAGTTGTTCCGTCTGATCTATGGGCTTGGCGAAAGTACGGTCAAAAACCTATCAAAGGTTCTCCTTATCCAAGGGGTTACTACAGATGTAGCAGCTCAAAAGGTTGTTCAGCTAGGAAACAAGTCGAACGTAGCCGCACTGATCCAAACATGTTAGTCATTACTTACACCTCTGAGCATAACCACCCATGGCCTACTCAACGCAACGCTCTCGCAGGTTCCACTCGTTCCTCTTCCTCCTCCTCTTTAAACCCTTCTTCCAAATCCTCAACCGCAGCCGCCACTACTTCTCCCTCATCCAGAGTTTTCCAAAACAACAGCAGCAAAGACGAACCCAATAACTCCAACTTGCCTTCCTCTTCCACTCATCCTCCTTTTGACGCCGCCGCAATTAAGGAGGAGAACGTGGAAGAGCGTCAGGAAAAGATGGAGTTCGATTATAATGACGTTGAAAATACCTATAGACCGGAGTTGTTGCAAGAGTTTCAACATCAGCCGGAGGATTTCTTTGCCGATCTCGACGAGCTTGAGGGAGATTCTTTGACTATGTTGCTCTCTCACAGTAGCGGCGGAGGCAACATGGAAAACAAAACGACGATTCCAGACGTTTTTAGTGATTTCTTTGACGACGACGAGTCCTCAAGGTCGTTATAA

Protein Analysis

427

Amino Acids

46.28

Weight (kDa)

5.72

Isoelectric Point (pI)

63.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WRKY PF03106 225 - 282 4.1e-26 WRKY DNA -binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010362)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1071, 1282
AatII GACGTC 1 cut(s) 33
Acc36I ACCTGC 1 cut(s) 836
AccB1I GGYRCC 1 cut(s) 245
AccB7I CCANNNNNTGG 1 cut(s) 71
AclI AACGTT 1 cut(s) 447
AclWI GGATC 4 cut(s) 55, 203, 216, 767
AcoI YGGCCR 2 cut(s) 228, 393
AcsI RAATTY 1 cut(s) 137
AcvI CACGTG 3 cut(s) 58, 133, 381
AcyI GRCGYC 3 cut(s) 30, 246, 1011
AfaI GTAC 2 cut(s) 36, 668
AfiI CCNNNNNNNGG 4 cut(s) 71, 83, 226, 686
AflIII ACRYGT 4 cut(s) 57, 380, 501, 780
AgsI TTSAA 2 cut(s) 1082, 1118
AhdI GACNNNNNGTC 1 cut(s) 1264
AjiI CACGTC 1 cut(s) 504
AjnI CCWGG 2 cut(s) 70, 570
AloI GAACNNNNNNTCC 4 cut(s) 605, 621, 637, 653
AluBI AGCT 6 cut(s) 165, 234, 425, 726, 743, 1156
AluI AGCT 6 cut(s) 165, 234, 425, 726, 743, 1156
Alw26I GTCTC 4 cut(s) 111, 173, 180, 409
AlwI GGATC 4 cut(s) 55, 203, 216, 767
AoxI GGCC 4 cut(s) 52, 228, 393, 821
ApeKI GCWGC 5 cut(s) 99, 422, 723, 905, 951
ApoI RAATTY 1 cut(s) 137
ArsI GACNNNNNNTTYG 2 cut(s) 655, 687
Asp700I GAANNNNTTC 1 cut(s) 636
AspLEI GCGC 1 cut(s) 248
AspS9I GGNCC 3 cut(s) 74, 86, 621
AsuC2I CCSGG 1 cut(s) 227
AsuHPI GGTGA 2 cut(s) 54, 263
AvaII GGWCC 3 cut(s) 74, 86, 621
BamHI GGATCC 1 cut(s) 208
BanI GGYRCC 1 cut(s) 245
BbrPI CACGTG 3 cut(s) 58, 133, 381
BbsI GAAGAC 1 cut(s) 322
BbvI GCAGC 5 cut(s) 111, 434, 735, 917, 963
BccI CCATC 3 cut(s) 73, 97, 1051
BceAI ACGGC 2 cut(s) 401, 415
BcgI CGANNNNNNTGC 2 cut(s) 823, 857
BciT130I CCWGG 2 cut(s) 72, 572
BclI TGATCA 2 cut(s) 304, 441
BcnI CCSGG 1 cut(s) 227
BcoDI GTCTC 4 cut(s) 111, 173, 180, 409
BfaI CTAG 1 cut(s) 744
BfmI CTRYAG 2 cut(s) 712, 1090
BfoI RGCGCY 1 cut(s) 249
BfuAI ACCTGC 1 cut(s) 836
BglII AGATCT 4 cut(s) 19, 124, 345, 525
Bme1390I CCNGG 3 cut(s) 72, 227, 572
Bme18I GGWCC 3 cut(s) 74, 86, 621
BmeRI GACNNNNNGTC 1 cut(s) 1264
BmgBI CACGTC 1 cut(s) 504
BmgT120I GGNCC 3 cut(s) 74, 86, 621
BmiI GGNNCC 4 cut(s) 210, 247, 600, 850
BmrFI CCNGG 3 cut(s) 72, 227, 572
BmsI GCATC 1 cut(s) 361
BpiI GAAGAC 1 cut(s) 322
BpmI CTGGAG 1 cut(s) 585
BpuEI CTTGAG 2 cut(s) 1178, 1255
BpuMI CCSGG 1 cut(s) 227
BsaAI YACGTR 3 cut(s) 58, 133, 381
BsaHI GRCGYC 3 cut(s) 30, 246, 1011
BsaI GGTCTC 1 cut(s) 180
BsaJI CCNNGG 5 cut(s) 13, 431, 539, 701, 818
BsaWI WCCGGW 2 cut(s) 79, 1096
BsaXI ACNNNNNCTCC 8 cut(s) 359, 389, 621, 651, 904, 934, 985, 1015
Bsc4I CCNNNNNNNGG 4 cut(s) 71, 83, 226, 686
Bse118I RCCGGY 3 cut(s) 248, 595, 618
Bse1I ACTGG 1 cut(s) 624
BseBI CCWGG 2 cut(s) 72, 572
BseDI CCNNGG 5 cut(s) 13, 431, 539, 701, 818
BseGI GGATG 4 cut(s) 216, 307, 926, 997
BseLI CCNNNNNNNGG 4 cut(s) 71, 83, 226, 686
BseMII CTCAG 1 cut(s) 795
BseNI ACTGG 1 cut(s) 624
BseRI GAGGAG 4 cut(s) 397, 859, 862, 1043
BseXI GCAGC 5 cut(s) 111, 434, 735, 917, 963
BshFI GGCC 4 cut(s) 54, 230, 395, 823
BshNI GGYRCC 1 cut(s) 245
BsiSI CCGG 9 cut(s) 80, 227, 243, 249, 392, 596, 619, 1097, 1127
BsiWI CGTACG 1 cut(s) 34
BslI CCNNNNNNNGG 4 cut(s) 71, 83, 226, 686
BsmAI GTCTC 4 cut(s) 111, 173, 180, 409
BsmBI CGTCTC 1 cut(s) 409
BsnI GGCC 4 cut(s) 54, 230, 395, 823
Bso31I GGTCTC 1 cut(s) 180
Bsp19I CCATGG 1 cut(s) 818
BspANI GGCC 4 cut(s) 54, 230, 395, 823
BspCNI CTCAG 1 cut(s) 796
BspLI GGNNCC 4 cut(s) 210, 247, 600, 850
BspMI ACCTGC 1 cut(s) 836
BspPI GGATC 4 cut(s) 55, 203, 216, 767
BspQI GCTCTTC 2 cut(s) 560, 1035
BspT107I GGYRCC 1 cut(s) 245
BspTNI GGTCTC 1 cut(s) 180
BsrFI RCCGGY 3 cut(s) 248, 595, 618
BsrI ACTGG 1 cut(s) 624
BssAI RCCGGY 3 cut(s) 248, 595, 618
BssECI CCNNGG 5 cut(s) 13, 431, 539, 701, 818
BssNI GRCGYC 3 cut(s) 30, 246, 1011
BssT1I CCWWGG 3 cut(s) 13, 701, 818
Bst2UI CCWGG 2 cut(s) 72, 572
Bst4CI ACNGT 5 cut(s) 403, 464, 476, 671, 1193
Bst6I CTCTTC 5 cut(s) 535, 560, 868, 994, 1035
BstACI GRCGYC 3 cut(s) 30, 246, 1011
BstBAI YACGTR 3 cut(s) 58, 133, 381
BstC8I GCNNGC 2 cut(s) 163, 232
BstDEI CTNAG 1 cut(s) 804
BstDSI CCRYGG 2 cut(s) 431, 818
BstENI CCTNNNNNAGG 1 cut(s) 684
BstF5I GGATG 4 cut(s) 216, 307, 926, 997
BstH2I RGCGCY 1 cut(s) 249
BstHHI GCGC 1 cut(s) 248
BstMAI GTCTC 4 cut(s) 111, 173, 180, 409
BstMWI GCNNNNNNNGC 5 cut(s) 158, 419, 422, 605, 1203
BstNI CCWGG 2 cut(s) 72, 572
BstNSI RCATGY 2 cut(s) 106, 784
BstSCI CCNGG 3 cut(s) 70, 225, 570
BstSFI CTRYAG 2 cut(s) 712, 1090
BstV1I GCAGC 5 cut(s) 111, 434, 735, 917, 963
BstV2I GAAGAC 1 cut(s) 322
BstX2I RGATCY 5 cut(s) 19, 124, 208, 345, 525
BstYI RGATCY 5 cut(s) 19, 124, 208, 345, 525
BsuRI GGCC 4 cut(s) 54, 230, 395, 823
BtgI CCRYGG 2 cut(s) 431, 818
BtrI CACGTC 1 cut(s) 504
BtsCI GGATG 4 cut(s) 216, 307, 926, 997
BtsI GCAGTG 1 cut(s) 331
BtsIMutI CAGTG 3 cut(s) 331, 631, 768
BveI ACCTGC 1 cut(s) 836
Cac8I GCNNGC 2 cut(s) 163, 232
CfoI GCGC 1 cut(s) 248
Cfr10I RCCGGY 3 cut(s) 248, 595, 618
Cfr13I GGNCC 3 cut(s) 74, 86, 621
CseI GACGC 2 cut(s) 1019, 1034
Csp6I GTAC 2 cut(s) 35, 667
CspCI CAANNNNNGTGG 2 cut(s) 564, 599
CviAII CATG 7 cut(s) 103, 202, 439, 510, 781, 819, 1210
CviQI GTAC 2 cut(s) 35, 667
DdeI CTNAG 1 cut(s) 804
DinI GGCGCC 1 cut(s) 247
DraI TTTAAA 1 cut(s) 879
DriI GACNNNNNGTC 1 cut(s) 1264
EaeI YGGCCR 2 cut(s) 228, 393
Eam1104I CTCTTC 5 cut(s) 535, 560, 868, 994, 1035
Eam1105I GACNNNNNGTC 1 cut(s) 1264
EarI CTCTTC 5 cut(s) 535, 560, 868, 994, 1035
EciI GGCGGA 3 cut(s) 99, 136, 1215
Eco130I CCWWGG 3 cut(s) 13, 701, 818
Eco31I GGTCTC 1 cut(s) 180
Eco47I GGWCC 3 cut(s) 74, 86, 621
Eco72I CACGTG 3 cut(s) 58, 133, 381
EcoNI CCTNNNNNAGG 1 cut(s) 684
EcoRI GAATTC 1 cut(s) 137
EcoRII CCWGG 2 cut(s) 70, 570
EcoT14I CCWWGG 3 cut(s) 13, 701, 818
EgeI GGCGCC 1 cut(s) 247
EheI GGCGCC 1 cut(s) 247
ErhI CCWWGG 3 cut(s) 13, 701, 818
Esp3I CGTCTC 1 cut(s) 409
FaeI CATG 7 cut(s) 106, 205, 442, 513, 784, 822, 1213
FatI CATG 7 cut(s) 102, 201, 438, 509, 780, 818, 1209
FbaI TGATCA 2 cut(s) 304, 441
FokI GGATG 4 cut(s) 203, 314, 913, 984
FspBI CTAG 1 cut(s) 744
GlaI GCGC 1 cut(s) 247
GsuI CTGGAG 1 cut(s) 585
HaeII RGCGCY 1 cut(s) 249
HaeIII GGCC 4 cut(s) 54, 230, 395, 823
HapII CCGG 9 cut(s) 80, 227, 243, 249, 392, 596, 619, 1097, 1127
HgaI GACGC 2 cut(s) 1019, 1034
HhaI GCGC 1 cut(s) 248
Hin1I GRCGYC 3 cut(s) 30, 246, 1011
Hin1II CATG 7 cut(s) 106, 205, 442, 513, 784, 822, 1213
Hin6I GCGC 1 cut(s) 246
HinP1I GCGC 1 cut(s) 246
HinfI GANTC 5 cut(s) 316, 544, 1166, 1228, 1265
HpaII CCGG 9 cut(s) 80, 227, 243, 249, 392, 596, 619, 1097, 1127
HphI GGTGA 2 cut(s) 54, 263
Hpy166II GTNNAC 1 cut(s) 479
Hpy188I TCNGA 8 cut(s) 96, 124, 185, 525, 543, 551, 646, 805
Hpy188III TCNNGA 4 cut(s) 930, 1049, 1148, 1232
Hpy8I GTNNAC 1 cut(s) 479
Hpy99I CGWCG 5 cut(s) 35, 1154, 1228, 1262, 1265
HpyAV CCTTC 6 cut(s) 77, 190, 199, 555, 894, 993
HpyCH4III ACNGT 5 cut(s) 403, 464, 476, 671, 1193
HpyCH4V TGCA 4 cut(s) 278, 324, 591, 1108
HpyF10VI GCNNNNNNNGC 5 cut(s) 158, 419, 422, 605, 1203
HpyF3I CTNAG 1 cut(s) 804
Hsp92I GRCGYC 3 cut(s) 30, 246, 1011
Hsp92II CATG 7 cut(s) 106, 205, 442, 513, 784, 822, 1213
HspAI GCGC 1 cut(s) 246
KasI GGCGCC 1 cut(s) 245
Ksp22I TGATCA 2 cut(s) 304, 441
LguI GCTCTTC 2 cut(s) 560, 1035
LmnI GCTCC 1 cut(s) 604
Lsp1109I GCAGC 5 cut(s) 111, 434, 735, 917, 963
LweI GCATC 1 cut(s) 361
MaeI CTAG 1 cut(s) 744
MaeIII GTNAC 3 cut(s) 60, 356, 707
MboII GAAGA 8 cut(s) 322, 522, 525, 577, 855, 879, 981, 1052
MflI RGATCY 5 cut(s) 19, 124, 208, 345, 525
MluCI AATT 5 cut(s) 137, 339, 385, 552, 1020
Mly113I GGCGCC 1 cut(s) 246
MlyI GAGTC 2 cut(s) 325, 1274
MmeI TCCRAC 1 cut(s) 999
MroXI GAANNNNTTC 1 cut(s) 636
MseI TTAA 6 cut(s) 312, 342, 450, 555, 878, 1023
MspA1I CMGCKG 1 cut(s) 165
MspI CCGG 9 cut(s) 80, 227, 243, 249, 392, 596, 619, 1097, 1127
MspR9I CCNGG 3 cut(s) 72, 227, 572
MvaI CCWGG 2 cut(s) 72, 572
MwoI GCNNNNNNNGC 5 cut(s) 158, 419, 422, 605, 1203
NarI GGCGCC 1 cut(s) 246
NciI CCSGG 1 cut(s) 227
NcoI CCATGG 1 cut(s) 818
NlaIII CATG 7 cut(s) 106, 205, 442, 513, 784, 822, 1213
NlaIV GGNNCC 4 cut(s) 210, 247, 600, 850
NmuCI GTSAC 1 cut(s) 60
NspI RCATGY 2 cut(s) 106, 784
PciI ACATGT 1 cut(s) 780
PciSI GCTCTTC 2 cut(s) 560, 1035
PdmI GAANNNNTTC 1 cut(s) 636
PfeI GAWTC 3 cut(s) 544, 1166, 1228
Pfl23II CGTACG 1 cut(s) 34
PflMI CCANNNNNTGG 1 cut(s) 71
PfoI TCCNGGA 1 cut(s) 70
PleI GAGTC 2 cut(s) 324, 1273
PluTI GGCGCC 1 cut(s) 249
PmaCI CACGTG 3 cut(s) 58, 133, 381
PmlI CACGTG 3 cut(s) 58, 133, 381
PpsI GAGTC 2 cut(s) 324, 1273
Ppu21I YACGTR 3 cut(s) 58, 133, 381
PscI ACATGT 1 cut(s) 780
PsiI TTATAA 2 cut(s) 1071, 1282
Psp1406I AACGTT 1 cut(s) 447
Psp6I CCWGG 2 cut(s) 70, 570
PspCI CACGTG 3 cut(s) 58, 133, 381
PspGI CCWGG 2 cut(s) 70, 570
PspLI CGTACG 1 cut(s) 34
PspN4I GGNNCC 4 cut(s) 210, 247, 600, 850
PspPI GGNCC 3 cut(s) 74, 86, 621
PsuI RGATCY 5 cut(s) 19, 124, 208, 345, 525
PvuII CAGCTG 1 cut(s) 165
RsaI GTAC 2 cut(s) 36, 668
RsaNI GTAC 2 cut(s) 35, 667
SapI GCTCTTC 2 cut(s) 560, 1035
SaqAI TTAA 6 cut(s) 312, 342, 450, 555, 878, 1023
Sau96I GGNCC 3 cut(s) 74, 86, 621
SchI GAGTC 2 cut(s) 325, 1274
ScrFI CCNGG 3 cut(s) 72, 227, 572
SfaNI GCATC 1 cut(s) 361
SfcI CTRYAG 2 cut(s) 712, 1090
SfoI GGCGCC 1 cut(s) 247
SgrAI CRCCGGYG 1 cut(s) 248
SinI GGWCC 3 cut(s) 74, 86, 621
SmlI CTYRAG 2 cut(s) 1157, 1270
SmoI CTYRAG 2 cut(s) 1157, 1270
Sse9I AATT 5 cut(s) 137, 339, 385, 552, 1020
SspDI GGCGCC 1 cut(s) 245
SspMI CTAG 1 cut(s) 744
StyD4I CCNGG 3 cut(s) 70, 225, 570
StyI CCWWGG 3 cut(s) 13, 701, 818
TaaI ACNGT 5 cut(s) 403, 464, 476, 671, 1193
TaqI TCGA 4 cut(s) 486, 756, 1065, 1149
TasI AATT 5 cut(s) 137, 339, 385, 552, 1020
TauI GCSGC 9 cut(s) 115, 152, 416, 608, 768, 911, 1016, 1019, 1200
TfiI GAWTC 3 cut(s) 544, 1166, 1228
Tru1I TTAA 6 cut(s) 312, 342, 450, 555, 878, 1023
Tru9I TTAA 6 cut(s) 312, 342, 450, 555, 878, 1023
TscAI CASTG 3 cut(s) 331, 631, 775
TseFI GTSAC 1 cut(s) 60
TseI GCWGC 5 cut(s) 99, 422, 723, 905, 951
Tsp45I GTSAC 1 cut(s) 60
TspDTI ATGAA 2 cut(s) 218, 626
TspGWI ACGGA 1 cut(s) 630
TspRI CASTG 3 cut(s) 331, 631, 775
Van91I CCANNNNNTGG 1 cut(s) 71
VpaK11BI GGWCC 3 cut(s) 74, 86, 621
XagI CCTNNNNNAGG 1 cut(s) 684
XapI RAATTY 1 cut(s) 137
XceI RCATGY 2 cut(s) 106, 784
XmnI GAANNNNTTC 1 cut(s) 636
XspI CTAG 1 cut(s) 744
ZraI GACGTC 1 cut(s) 31
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.