Prupe.4G101100_v2.0.a1
WRKY Family

WRKY transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
5151633 .. 5155910
4278 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G101100.1

Sequence Viewer

Length: 1545 bp
ATGTGCAGCTTGTTCATGCCAATTACTAGGATGGAGAATTACCAAGGTGATTTAACTGATATTCTTAGAGCTGGCAGTGCTGCTACTTCCGCCGCAGGAGCTTACCATTCTGATCATCTTCTTCATCATCATCATCAAGAACCTGAAGCCGCCGCCGACAGCTGGCACTTCCCATCTGACCATCCTCCTCCCATGAAATTTTCCTCAGCGTCCTCAGCCATGGAGGAGGAGGAAGAAGAAGATGCCAAGGACAATTTTGGCGATCCCTTTTCATCCTACATGCGCGATCCGCTTCTTCATGAACTGGACATATCGTCTAGCTCCAGCTTTTTCATCAGCCCCAATTCCTCATCAGATATGAATATTAACATCACTTCTGTGGATGAAGCTGGCGGTACAAGTAGCACTTTTGGCGGTGCACATATAGTTCTTGCTCCTCCTCCTCCTCCACCTCATCACCACCATCTTCATCATCATCAACAAGGTGGTGTTGTTGATGGGGATCCAATAAAGAGGCCTTGCAACATATTCTCGCGGATGCTTCAGATCTCTCCGAGTGCAAAGGTCCCAGTGACGGCATGTGACTCGCCGTTGCTGGGTGCAGCAACAGCAGTGTCGTCTCCACGGGGAATTAGTAAGGCGGTGTCTGGTTCGATATCTGGTGCCATGGTTGGAAGCGACATGATTATTAATGGGAACAGCTCATCAGGAAAAGGTTGCTTGCTCGAGAACACCGGGGTGCAGATCTCATCTCCACGGAATCCGGGCATCAAGCGAAGGAAGAGCCAGGCAAAGAAGGTTGTGTGCATTCCAGCGCCTGCGGCGGCAAACAGCAGGCCAACTGGAGAAGTAGTTCCATCTGATCTGTGGGCATGGAGAAAGTACGGCCAGAAACCCATCAAAGGTTCACCTTATCCAAGGGGTTACTATCGATGCAGCAGCTCAAAGGGTTGCTCAGCAAGGAAACAAGTAGAGCGTAGCCGGACTGATCCAAACATGTTGGTCATCACTTACACTTCGGAACACAACCATCCCTGGCCAACTCAGAGAAATGCTCTAGCTGGCTCAACGAGATCCCAGCCATCCAAAAGCAGTGCCGGTTCGAAGACCTCTTCCAATAGTTCTCATCAGCCTCATCAGAAGCCAGCAAGCCCTACAAAGGAAGAACAAAATGAGACCATGAATGATAATAATCATGTGTCTCCAGTTATCACTGCTGGGAGTGCTTCAACAGTGAAGGAAGAATTTGAGGACATTGAGAAGCAATTGGAGCTTGATCATCAAGCAGGGTTTCCTTATAGACCATCAATGCCTGATGATCAGTCCAACCAGTCTCATCACAATGAGGACTTCTTTGCTGATTTAGGAGAAATTGAGGCTGATCCACTAAACCTTTTGTTTTCACAATGTTTCACAGCAGATGAGCAGCAAAAGGGAAGCAAGGCTGCAGCCTTGGATCCATTCAATCTCTTTGATTGGTCTGGGGATCAAAACACCAACAACAACACCACCTCATTTGGTGAAGCAGCTAAGAGGCGCTTATAA

Protein Analysis

515

Amino Acids

55.63

Weight (kDa)

6.01

Isoelectric Point (pI)

58.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010362)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1543
AccB1I GGYRCC 1 cut(s) 662
AccII CGCG 2 cut(s) 285, 535
AcoI YGGCCR 2 cut(s) 886, 1037
AcsI RAATTY 2 cut(s) 197, 1244
AcuI CTGAAG 2 cut(s) 165, 527
AfaI GTAC 2 cut(s) 397, 884
AfiI CCNNNNNNNGG 5 cut(s) 162, 574, 596, 902, 1159
AflIII ACRYGT 1 cut(s) 996
AgsI TTSAA 2 cut(s) 1230, 1465
AhdI GACNNNNNGTC 1 cut(s) 313
AjnI CCWGG 2 cut(s) 786, 1034
AleI CACNNNNGTG 2 cut(s) 377, 737
AloI GAACNNNNNNTCC 2 cut(s) 837, 869
Alw21I GWGCWC 1 cut(s) 421
Alw26I GTCTC 4 cut(s) 624, 1169, 1206, 1338
Alw44I GTGCAC 1 cut(s) 417
AlwNI CAGNNNCTG 1 cut(s) 818
Ama87I CYCGRG 1 cut(s) 725
AoxI GGCC 4 cut(s) 515, 836, 886, 1037
ApaLI GTGCAC 1 cut(s) 417
ApeKI GCWGC 9 cut(s) 6, 80, 602, 936, 939, 1426, 1445, 1448, 1526
ApoI RAATTY 2 cut(s) 197, 1244
AseI ATTAAT 1 cut(s) 690
Asp700I GAANNNNTTC 1 cut(s) 852
AspLEI GCGC 3 cut(s) 285, 817, 1539
AspS9I GGNCC 1 cut(s) 565
AsuC2I CCSGG 2 cut(s) 736, 765
AsuHPI GGTGA 4 cut(s) 59, 449, 900, 1532
AsuII TTCGAA 1 cut(s) 1103
AvaI CYCGRG 1 cut(s) 725
AvaII GGWCC 1 cut(s) 565
BaeGI GKGCMC 1 cut(s) 421
BalI TGGCCA 1 cut(s) 1039
BamHI GGATCC 2 cut(s) 502, 1456
BanI GGYRCC 1 cut(s) 662
BbsI GAAGAC 1 cut(s) 1112
Bbv12I GWGCWC 1 cut(s) 421
BbvCI CCTCAGC 2 cut(s) 205, 214
BbvI GCAGC 9 cut(s) 18, 67, 614, 948, 951, 1432, 1438, 1460, 1538
BceAI ACGGC 3 cut(s) 574, 591, 901
BcgI CGANNNNNNTGC 2 cut(s) 567, 601
BciT130I CCWGG 2 cut(s) 788, 1036
BclI TGATCA 3 cut(s) 112, 1276, 1318
BcnI CCSGG 2 cut(s) 736, 765
BcoDI GTCTC 4 cut(s) 624, 1169, 1206, 1338
BfaI CTAG 3 cut(s) 27, 318, 1058
BfmI CTRYAG 1 cut(s) 1446
BfoI RGCGCY 2 cut(s) 818, 1540
BglII AGATCT 2 cut(s) 546, 744
BlpI GCTNAGC 1 cut(s) 955
Bme1390I CCNGG 4 cut(s) 736, 765, 788, 1036
Bme18I GGWCC 1 cut(s) 565
BmeRI GACNNNNNGTC 1 cut(s) 313
BmeT110I CYCGRG 1 cut(s) 725
BmgT120I GGNCC 1 cut(s) 565
BmiI GGNNCC 4 cut(s) 504, 567, 664, 1458
BmrFI CCNGG 4 cut(s) 736, 765, 788, 1036
BmrI ACTGGG 1 cut(s) 563
BmsI GCATC 4 cut(s) 232, 528, 777, 923
BmuI ACTGGG 1 cut(s) 563
BpiI GAAGAC 1 cut(s) 1112
BplI GAGNNNNNCTC 2 cut(s) 1039, 1071
BpmI CTGGAG 3 cut(s) 307, 864, 1188
Bpu10I CCTNAGC 2 cut(s) 205, 214
Bpu1102I GCTNAGC 1 cut(s) 955
Bpu14I TTCGAA 1 cut(s) 1103
BpuMI CCSGG 2 cut(s) 736, 765
Bsa29I ATCGAT 1 cut(s) 931
BsaBI GATNNNNATC 2 cut(s) 501, 1191
BsaI GGTCTC 1 cut(s) 1169
BsaXI ACNNNNNCTCC 2 cut(s) 837, 867
Bsc4I CCNNNNNNNGG 5 cut(s) 162, 574, 596, 902, 1159
Bse118I RCCGGY 1 cut(s) 1097
Bse1I ACTGG 5 cut(s) 309, 569, 847, 1205, 1330
Bse8I GATNNNNATC 2 cut(s) 501, 1191
BseBI CCWGG 2 cut(s) 788, 1036
BseCI ATCGAT 1 cut(s) 931
BseGI GGATG 7 cut(s) 36, 181, 272, 388, 543, 1030, 1082
BseJI GATNNNNATC 2 cut(s) 501, 1191
BseLI CCNNNNNNNGG 5 cut(s) 162, 574, 596, 902, 1159
BseMII CTCAG 4 cut(s) 219, 228, 969, 1058
BseNI ACTGG 5 cut(s) 309, 569, 847, 1205, 1330
BseRI GAGGAG 7 cut(s) 177, 239, 242, 426, 429, 432, 435
BseSI GKGCMC 1 cut(s) 421
BseXI GCAGC 9 cut(s) 18, 67, 614, 948, 951, 1432, 1438, 1460, 1538
BseYI CCCAGC 3 cut(s) 595, 1077, 1217
BsgI GTGCAG 3 cut(s) 25, 621, 761
Bsh1236I CGCG 2 cut(s) 285, 535
BshFI GGCC 4 cut(s) 517, 838, 888, 1039
BshNI GGYRCC 1 cut(s) 662
BshVI ATCGAT 1 cut(s) 931
BsiHKAI GWGCWC 1 cut(s) 421
BsiHKCI CYCGRG 1 cut(s) 725
BsiSI CCGG 4 cut(s) 735, 764, 982, 1098
BslFI GGGAC 1 cut(s) 551
BslI CCNNNNNNNGG 5 cut(s) 162, 574, 596, 902, 1159
BsmAI GTCTC 4 cut(s) 624, 1169, 1206, 1338
BsmBI CGTCTC 1 cut(s) 624
BsmFI GGGAC 1 cut(s) 551
BsmI GAATGC 1 cut(s) 807
BsnI GGCC 4 cut(s) 517, 838, 888, 1039
Bso31I GGTCTC 1 cut(s) 1169
BsoBI CYCGRG 1 cut(s) 725
Bsp119I TTCGAA 1 cut(s) 1103
Bsp1286I GDGCHC 1 cut(s) 421
Bsp1720I GCTNAGC 1 cut(s) 955
Bsp19I CCATGG 2 cut(s) 219, 666
BspANI GGCC 4 cut(s) 517, 838, 888, 1039
BspCNI CTCAG 4 cut(s) 218, 227, 968, 1057
BspDI ATCGAT 1 cut(s) 931
BspFNI CGCG 2 cut(s) 285, 535
BspHI TCATGA 1 cut(s) 298
BspLI GGNNCC 4 cut(s) 504, 567, 664, 1458
BspMAI CTGCAG 1 cut(s) 1450
BspQI GCTCTTC 1 cut(s) 776
BspT104I TTCGAA 1 cut(s) 1103
BspT107I GGYRCC 1 cut(s) 662
BspTNI GGTCTC 1 cut(s) 1169
BsrFI RCCGGY 1 cut(s) 1097
BsrI ACTGG 5 cut(s) 309, 569, 847, 1205, 1330
BssAI RCCGGY 1 cut(s) 1097
BssT1I CCWWGG 6 cut(s) 43, 219, 246, 666, 917, 1452
Bst2UI CCWGG 2 cut(s) 788, 1036
Bst4CI ACNGT 1 cut(s) 1234
Bst6I CTCTTC 2 cut(s) 776, 1117
BstBI TTCGAA 1 cut(s) 1103
BstC8I GCNNGC 9 cut(s) 73, 164, 391, 722, 819, 836, 1063, 1146, 1150
BstDEI CTNAG 6 cut(s) 65, 205, 214, 955, 1044, 1530
BstDSI CCRYGG 4 cut(s) 219, 623, 666, 755
BstF5I GGATG 7 cut(s) 36, 181, 272, 388, 543, 1030, 1082
BstFNI CGCG 2 cut(s) 285, 535
BstH2I RGCGCY 2 cut(s) 818, 1540
BstHHI GCGC 3 cut(s) 285, 817, 1539
BstMAI GTCTC 4 cut(s) 624, 1169, 1206, 1338
BstNI CCWGG 2 cut(s) 788, 1036
BstNSI RCATGY 3 cut(s) 283, 582, 1000
BstSCI CCNGG 4 cut(s) 734, 763, 786, 1034
BstSFI CTRYAG 1 cut(s) 1446
BstSLI GKGCMC 1 cut(s) 421
BstUI CGCG 2 cut(s) 285, 535
BstV1I GCAGC 9 cut(s) 18, 67, 614, 948, 951, 1432, 1438, 1460, 1538
BstV2I GAAGAC 1 cut(s) 1112
BstX2I RGATCY 5 cut(s) 502, 546, 744, 1073, 1456
BstYI RGATCY 5 cut(s) 502, 546, 744, 1073, 1456
Bsu15I ATCGAT 1 cut(s) 931
BsuRI GGCC 4 cut(s) 517, 838, 888, 1039
BsuTUI ATCGAT 1 cut(s) 931
BtgI CCRYGG 4 cut(s) 219, 623, 666, 755
BtsCI GGATG 7 cut(s) 36, 181, 272, 388, 543, 1030, 1082
BtsI GCAGTG 4 cut(s) 82, 618, 1099, 1212
BtsIMutI CAGTG 6 cut(s) 82, 576, 618, 1099, 1212, 1239
Cac8I GCNNGC 9 cut(s) 73, 164, 391, 722, 819, 836, 1063, 1146, 1150
CaiI CAGNNNCTG 1 cut(s) 818
CciI TCATGA 1 cut(s) 298
CfoI GCGC 3 cut(s) 285, 817, 1539
Cfr10I RCCGGY 1 cut(s) 1097
Cfr13I GGNCC 1 cut(s) 565
ClaI ATCGAT 1 cut(s) 931
CseI GACGC 1 cut(s) 198
Csp6I GTAC 2 cut(s) 396, 883
CspCI CAANNNNNGTGG 2 cut(s) 1498, 1533
CviQI GTAC 2 cut(s) 396, 883
DdeI CTNAG 6 cut(s) 65, 205, 214, 955, 1044, 1530
DriI GACNNNNNGTC 1 cut(s) 313
EaeI YGGCCR 2 cut(s) 886, 1037
Eam1104I CTCTTC 2 cut(s) 776, 1117
Eam1105I GACNNNNNGTC 1 cut(s) 313
EarI CTCTTC 2 cut(s) 776, 1117
EciI GGCGGA 1 cut(s) 79
Eco130I CCWWGG 6 cut(s) 43, 219, 246, 666, 917, 1452
Eco147I AGGCCT 1 cut(s) 517
Eco31I GGTCTC 1 cut(s) 1169
Eco32I GATATC 1 cut(s) 657
Eco47I GGWCC 1 cut(s) 565
Eco57I CTGAAG 2 cut(s) 165, 527
Eco88I CYCGRG 1 cut(s) 725
EcoO109I RGGNCCY 1 cut(s) 565
EcoRII CCWGG 2 cut(s) 786, 1034
EcoRV GATATC 1 cut(s) 657
EcoT14I CCWWGG 6 cut(s) 43, 219, 246, 666, 917, 1452
ErhI CCWWGG 6 cut(s) 43, 219, 246, 666, 917, 1452
Esp3I CGTCTC 1 cut(s) 624
FalI AAGNNNNNCTT 3 cut(s) 391, 423, 1523
FaqI GGGAC 1 cut(s) 551
FbaI TGATCA 3 cut(s) 112, 1276, 1318
FokI GGATG 7 cut(s) 43, 168, 259, 395, 550, 1017, 1069
FspBI CTAG 3 cut(s) 27, 318, 1058
GlaI GCGC 3 cut(s) 284, 816, 1538
GsaI CCCAGC 3 cut(s) 599, 1081, 1221
GsuI CTGGAG 3 cut(s) 307, 864, 1188
HaeII RGCGCY 2 cut(s) 818, 1540
HaeIII GGCC 4 cut(s) 517, 838, 888, 1039
HapII CCGG 4 cut(s) 735, 764, 982, 1098
HgaI GACGC 1 cut(s) 198
HhaI GCGC 3 cut(s) 285, 817, 1539
Hin6I GCGC 3 cut(s) 283, 815, 1537
HinP1I GCGC 3 cut(s) 283, 815, 1537
HinfI GANTC 2 cut(s) 584, 760
HpaII CCGG 4 cut(s) 735, 764, 982, 1098
HphI GGTGA 4 cut(s) 59, 449, 900, 1532
Hpy166II GTNNAC 2 cut(s) 419, 908
Hpy188I TCNGA 9 cut(s) 112, 178, 355, 546, 555, 862, 1021, 1047, 1140
Hpy188III TCNNGA 4 cut(s) 137, 299, 708, 727
Hpy8I GTNNAC 2 cut(s) 419, 908
HpyAV CCTTC 3 cut(s) 771, 790, 1231
HpyCH4III ACNGT 1 cut(s) 1234
HpyCH4V TGCA 9 cut(s) 6, 419, 522, 560, 602, 742, 807, 936, 1448
HpyF3I CTNAG 6 cut(s) 65, 205, 214, 955, 1044, 1530
HspAI GCGC 3 cut(s) 283, 815, 1537
Ksp22I TGATCA 3 cut(s) 112, 1276, 1318
LguI GCTCTTC 1 cut(s) 776
LmnI GCTCC 4 cut(s) 98, 326, 439, 1270
Lsp1109I GCAGC 9 cut(s) 18, 67, 614, 948, 951, 1432, 1438, 1460, 1538
LweI GCATC 4 cut(s) 232, 528, 777, 923
MaeI CTAG 3 cut(s) 27, 318, 1058
MaeIII GTNAC 3 cut(s) 571, 581, 923
MfeI CAATTG 1 cut(s) 1265
MflI RGATCY 5 cut(s) 502, 546, 744, 1073, 1456
MhlI GDGCHC 1 cut(s) 421
MlsI TGGCCA 1 cut(s) 1039
MluCI AATT 9 cut(s) 21, 37, 197, 253, 343, 630, 1244, 1265, 1371
MluNI TGGCCA 1 cut(s) 1039
MlyI GAGTC 1 cut(s) 578
MmeI TCCRAC 2 cut(s) 652, 1350
Mox20I TGGCCA 1 cut(s) 1039
MroXI GAANNNNTTC 1 cut(s) 852
MscI TGGCCA 1 cut(s) 1039
MseI TTAA 3 cut(s) 53, 366, 690
MslI CAYNNNNRTG 3 cut(s) 377, 737, 1341
Msp20I TGGCCA 1 cut(s) 1039
MspA1I CMGCKG 1 cut(s) 162
MspI CCGG 4 cut(s) 735, 764, 982, 1098
MspR9I CCNGG 4 cut(s) 736, 765, 788, 1036
MunI CAATTG 1 cut(s) 1265
Mva1269I GAATGC 1 cut(s) 807
MvaI CCWGG 2 cut(s) 788, 1036
MvnI CGCG 2 cut(s) 285, 535
NciI CCSGG 2 cut(s) 736, 765
NcoI CCATGG 2 cut(s) 219, 666
NlaIV GGNNCC 4 cut(s) 504, 567, 664, 1458
NmuCI GTSAC 2 cut(s) 571, 581
NspI RCATGY 3 cut(s) 283, 582, 1000
NspV TTCGAA 1 cut(s) 1103
OliI CACNNNNGTG 2 cut(s) 377, 737
PaeR7I CTCGAG 1 cut(s) 725
PagI TCATGA 1 cut(s) 298
PceI AGGCCT 1 cut(s) 517
PciI ACATGT 1 cut(s) 996
PciSI GCTCTTC 1 cut(s) 776
PctI GAATGC 1 cut(s) 807
PdmI GAANNNNTTC 1 cut(s) 852
PfeI GAWTC 1 cut(s) 760
PleI GAGTC 1 cut(s) 578
PpsI GAGTC 1 cut(s) 578
PpuMI RGGWCCY 1 cut(s) 565
PscI ACATGT 1 cut(s) 996
PshBI ATTAAT 1 cut(s) 690
PsiI TTATAA 1 cut(s) 1543
Psp5II RGGWCCY 1 cut(s) 565
Psp6I CCWGG 2 cut(s) 786, 1034
PspFI CCCAGC 3 cut(s) 595, 1077, 1217
PspGI CCWGG 2 cut(s) 786, 1034
PspN4I GGNNCC 4 cut(s) 504, 567, 664, 1458
PspPI GGNCC 1 cut(s) 565
PspPPI RGGWCCY 1 cut(s) 565
PstI CTGCAG 1 cut(s) 1450
PstNI CAGNNNCTG 1 cut(s) 818
PsuI RGATCY 5 cut(s) 502, 546, 744, 1073, 1456
PvuII CAGCTG 1 cut(s) 162
RsaI GTAC 2 cut(s) 397, 884
RsaNI GTAC 2 cut(s) 396, 883
RseI CAYNNNNRTG 3 cut(s) 377, 737, 1341
SapI GCTCTTC 1 cut(s) 776
SaqAI TTAA 3 cut(s) 53, 366, 690
Sau96I GGNCC 1 cut(s) 565
SchI GAGTC 1 cut(s) 578
ScrFI CCNGG 4 cut(s) 736, 765, 788, 1036
SduI GDGCHC 1 cut(s) 421
SfaNI GCATC 4 cut(s) 232, 528, 777, 923
SfcI CTRYAG 1 cut(s) 1446
Sfr274I CTCGAG 1 cut(s) 725
SfuI TTCGAA 1 cut(s) 1103
SinI GGWCC 1 cut(s) 565
SlaI CTCGAG 1 cut(s) 725
SmiMI CAYNNNNRTG 3 cut(s) 377, 737, 1341
SmlI CTYRAG 1 cut(s) 725
SmoI CTYRAG 1 cut(s) 725
Sse9I AATT 9 cut(s) 21, 37, 197, 253, 343, 630, 1244, 1265, 1371
SseBI AGGCCT 1 cut(s) 517
SspI AATATT 1 cut(s) 364
SspMI CTAG 3 cut(s) 27, 318, 1058
StuI AGGCCT 1 cut(s) 517
StyD4I CCNGG 4 cut(s) 734, 763, 786, 1034
StyI CCWWGG 6 cut(s) 43, 219, 246, 666, 917, 1452
TaaI ACNGT 1 cut(s) 1234
TaqI TCGA 4 cut(s) 653, 726, 931, 1103
TasI AATT 9 cut(s) 21, 37, 197, 253, 343, 630, 1244, 1265, 1371
TauI GCSGC 5 cut(s) 95, 152, 155, 824, 827
TfiI GAWTC 1 cut(s) 760
Tru1I TTAA 3 cut(s) 53, 366, 690
Tru9I TTAA 3 cut(s) 53, 366, 690
TscAI CASTG 6 cut(s) 82, 576, 618, 1099, 1219, 1239
TseFI GTSAC 2 cut(s) 571, 581
TseI GCWGC 9 cut(s) 6, 80, 602, 936, 939, 1426, 1445, 1448, 1526
Tsp45I GTSAC 2 cut(s) 571, 581
TspGWI ACGGA 1 cut(s) 772
TspRI CASTG 6 cut(s) 82, 576, 618, 1099, 1219, 1239
VneI GTGCAC 1 cut(s) 417
VpaK11BI GGWCC 1 cut(s) 565
VspI ATTAAT 1 cut(s) 690
XapI RAATTY 2 cut(s) 197, 1244
XceI RCATGY 3 cut(s) 283, 582, 1000
XcmI CCANNNNNNNNNTGG 1 cut(s) 864
XhoI CTCGAG 1 cut(s) 725
XmnI GAANNNNTTC 1 cut(s) 852
XspI CTAG 3 cut(s) 27, 318, 1058
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.