Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005600

Physical Location & Seq

Genomic Coordinates Reverse (-)

17734302 .. 17739167

Gene Structure 4866 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G42600.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2892 bp

ATGGCTGCGAGAAATTTGGAGAAGATGGCTTCTATTGATGCTCAGCTCAGGCTTCTTGCTCCTGGCAAGGTTTCTGAAGACGACAAGCTTATCGAGTACGATGCTCTGTTACTGGATCGATTTCTCGATATTCTTCAGGATTTGCATGGCGAGGATGTCAGAGAATTCGTTCAAGAATGCTACGAAGTTGCAGCTGATTACGATGGAAACCGCAACACTGAGAAGCTTGAGGAGCTTGGAAATATGCTGACGAGTTTGGATCCAGGGGATTCAATTGTTGTCACTAAATCATTCTCCAACATGCTTAGCTTGGCTAATCTGGCTGAGGAAGTCCAGATTGCTTACCGGCGTAGGATTAAGAAACTCAAGAAAGGTGATTTCGCTGATGAGGCCTCTGCAACAACGGAATCTGACATTGAAGAGACTCTCAAGAGGCTTTTGCAGCTTAACAAGACTCCTGAAGAGGTCTTTGATGCTCTTAAGAATCAGACTGTTGACTTGGTTTTAACTGCTCATCCCACTCAATCTGTTCGTCGGTCTTTGCTCCAAAAGTTTGGAAGGATTCGTGATTGTTTGACGCAGTTATATGCAAAGGACATTACTCCTGATGACAAACAAGAACTCGATGAAGCTCTGCAACGAGAGATTCAAGCTGCTTTTCGCACAGATGAAATCCGAAGAACTCCTCCTACACCGCAAGATGAAATGAGAGCAGGGATGAGCTACTTCCATGAGACAATCTGGAAAGGAGTTCCAAAGTTCTTAAGACGTGTTGACACAGCTTTAAAGAACATTGGAATCAACGAGCGTGTTCCTTACAATGCGCCTCTCATTCAGTTCTCTTCTTGGATGGGCGGAGACCGTGATGGAAACCCGCGAGTAACTCCTGAAGTTACAAGAGATGTATGCTTATTAGCTAGAATGATGGCTGCTAATCTCTACTTCTCCCAGATAGAAGATCTTATGTTTGAGATGTCTATGTGGCGTTGCAATGAGGAACTTCGGGTTCGTGCAGAACGTCAAAGATGTGCGAAGAGGGATGCAAAACACTATATAGAATTCTGGAAACAAATCCCTGCGAATGAGCCATACCGAGCTATTCTTGGAGATGTGAGGGACAAGCTGTACAACACACGTGAGCGTGCACGTCAGTTATTGTCAAGCGGAGTTTCGGACGTTCCCGAAGACGCGGTTTTCACAAGTGTGGATCAGTTTTTGGAGCCACTTGAGCTTTGTTACAGGTCGCTCTGTGATTGCGGTGACAGACCTATTGCTGATGGAAGCCTGCTTGATTTCTTACGCCAAGTGTCAACATTTGGCCTTGCTCTTGTGAAACTTGATATCCGTCAAGAATCTGAAAGACACTCTGATGTCTTGGATGCCATCACGACGCACTTAGGTATTGGTTCTTACAAAGAATGGTCGGAGGATAAAAGACAGGAATGGCTGTTATCTGAGCTAAGCGGGAAACGCCCTCTCTTTGGACCGGATCTTCCCAAAACCGAAGAGGTTGCAGATGTGTTGGACACTTTCAAAGTCATTTCTGAGCTTCCTTCGGATAGTTTTGGTGCTTATATTATCTCAATGGCCACTGCTCCATCAGACGTGCTCGCTGTTGAGCTTTTGCAACGCGAATGCGGGATCACTGATCCTCTGAGAGTTGTCCCGTTGTTCGAGAAGCTAGCGGATTTAGAATCCGCACCTGCTGCAGTTGCCCGTCTCTTCTCCATAGAATGGTACAGAAACAGGATCAATGGAAAGCAAGAAGTCATGATCGGGTACTCTGACTCGGGCAAAGATGCTGGTCGTTTATCAGCGGCTTGGCAGTTATACAAGACTCAAGAAGAGCTCGTGAAGGTGGCAAAAGAATACGGAGTCAAGCTGACAATGTTCCACGGAAGAGGTGGGACCGTTGGACGAGGAGGTGGACCTACCCATCTTGCTATTTTGTCTCAGCCTCCGGATACCATTCATGGGCAATTGAGGGTAACGGTTCAAGGTGAAGTTATTGAACAGTCTTTCGGAGAAGAGCACTTATGCTTTAGGACTCTTCAGCGTTTCACAGCTGCAACACTTGAGCATGGAATGCATCCACCGGTTTCCCCTAAGCCTGAGTGGCGTGTCCTCATGGATGAAATGGCTATAATTGCCACTGAAGAATACCGTTCTGTTGTCTTCAAGGAGCCCCGTTTTGTTGAGTACTTCCGTCTGGCAACACCAGAGCTCGAGTATGGAAGGATGAACATAGGAAGCCGACCATCAAAACGTAAACCAAGCGGAGGAATCGAGTCGCTGCGTGCAATCCCGTGGATCTTTGCGTGGACTCAGACGAGGTTTCACTTACCCGTGTGGCTTGGCTTTGGAGGAGCATTCAAACGCGTGATACAGAAGGACAGTAAGAATCTCAACATGCTCAAAGAGATGTACAACCAATGGCCATTCTTCCGTGTCACAATTGATCTAGTCGAAATGGTTTTCGCCAAAGGAGATCCCGGAATTGCGGCTCTGTATGACCGCCTCCTCGTCTCTGAAGAACTTCAACCATTCGGTGAACAACTTCGAGTTAACTACCAAGAGACCAGACGCCTCCTCCTCCAGGTTGCAGGTCACAAAGACATTTTAGAAGGTGACCCTTACTTGAGGCAAAGGCTGCAGCTTCGTGACCCATACATCACGACATTGAACGTGTGTCAAGCCTATACACTCAAGCAGATCCGTGACCCAAGCTTCCACGTCAAAGTCCGGCCACATCTCTCTAAGGACTACATGGAGTCTAGTCCAGCGGCTGAGCTCGTGAAACTGAATCCAAAGAGTGAATACGCACCGGGACTTGAAGATACGGTTATCCTCACCATGAAGGGTATCGCTGCTGGTATGCAAAACACCGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004611 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0008964 GO:0009267 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009987 GO:0009991 GO:0015977 GO:0016020 GO:0016036 GO:0016043 GO:0016829 GO:0016830 GO:0016831 GO:0022607 GO:0030054 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051259 GO:0051262 GO:0051716 GO:0055044 GO:0065003 GO:0071496 GO:0071704 GO:0071840 GO:0071944 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko00620 ko00680 ko00710 ko00720 ko01100 ko01120 ko01200 map00620 map00680 map00710 map00720 map01100 map01120 map01200

Pfam Domains

Protein Families

PEPcase

Protein Analysis

963

Amino Acids

109.75

Weight (kDa)

5.57

Isoelectric Point (pI)

48.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PEPcase	PF00311	34 - 963	0.0	Phosphoenolpyruvate carboxylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42600 AT2G42600 AT2G42600
fragaria_vesca	FvH4_6g27390 FvH4_6g27390 FvH4_6g27390 FvH4_6g33320
malus_domestica	MD09G1237900.v1.1 MD17G1230800.v1.1
prunus_persica	Prupe.3G118300_v2.0.a1
pyrus_communis	pycom09g15640 pycom17g23400
rosa_chinensis	RchiOBHm_Chr2g0090101 RchiOBHm_Chr2g0129661
rosa_laevigata	RLG00000016085 RLG00000019094
rosa_multiflora	Rmu_sc0008968.1_g000006 Rmu_sc0009263.1_g000005 Rmu_sc0020548.1_g000003
rosa_roxburghii	Rroxscaffold_2G00114470
rosa_rugosa	Rorug02G0005300 Rorug02G0288200
rosa_samantha	Rh2AG339500 Rh2BG348300 Rh2CG326900 Rh2DG366400
rosa_wichuraiana	Rw2G004560 Rw2G027850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1711
Acc36I	ACCTGC	2 cut(s)	1711, 2594
AccB7I	CCANNNNNTGG	1 cut(s)	1734
AccII	CGCG	4 cut(s)	877, 1190, 1632, 2379
AccIII	TCCGGA	1 cut(s)	1960
AcoI	YGGCCR	3 cut(s)	1587, 2435, 2744
AcsI	RAATTY	3 cut(s)	13, 164, 1058
AcuI	CTGAAG	7 cut(s)	96, 119, 480, 909, 2036, 2175, 2550
AcvI	CACGTG	1 cut(s)	1136
AcyI	GRCGYC	1 cut(s)	2584
AfaI	GTAC	6 cut(s)	98, 1127, 1739, 1781, 2201, 2426
AfiI	CCNNNNNNNGG	5 cut(s)	1481, 1734, 1974, 2279, 2596
AflII	CTTAAG	2 cut(s)	479, 763
AflIII	ACRYGT	4 cut(s)	769, 1133, 2377, 2685
AgeI	ACCGGT	2 cut(s)	2095, 2885
AjiI	CACGTC	4 cut(s)	770, 1148, 1606, 2734
AjnI	CCWGG	3 cut(s)	61, 262, 2595
AleI	CACNNNNGTG	1 cut(s)	1202
Alw21I	GWGCWC	6 cut(s)	1147, 1611, 1851, 2034, 2226, 2793
Alw26I	GTCTC	7 cut(s)	416, 728, 852, 1724, 1956, 2530, 2570
Alw44I	GTGCAC	1 cut(s)	1143
AlwNI	CAGNNNCTG	1 cut(s)	2786
Ama87I	CYCGRG	2 cut(s)	1789, 2225
Aor13HI	TCCGGA	1 cut(s)	1960
AoxI	GGCC	5 cut(s)	390, 1318, 1587, 2435, 2744
ApaLI	GTGCAC	1 cut(s)	1143
ApoI	RAATTY	3 cut(s)	13, 164, 1058
AsiGI	ACCGGT	2 cut(s)	2095, 2885
Asp700I	GAANNNNTTC	3 cut(s)	168, 2535, 2556
AspLEI	GCGC	1 cut(s)	826
AspS9I	GGNCC	3 cut(s)	1484, 1908, 1928
AsuC2I	CCSGG	2 cut(s)	2493, 2826
AsuHPI	GGTGA	6 cut(s)	386, 1271, 2012, 2561, 2639, 2842
AsuNHI	GCTAGC	1 cut(s)	1681
AvaI	CYCGRG	2 cut(s)	1789, 2225
AvaII	GGWCC	3 cut(s)	1484, 1908, 1928
BaeGI	GKGCMC	1 cut(s)	1147
BalI	TGGCCA	2 cut(s)	1589, 2437
BamHI	GGATCC	1 cut(s)	259
BanII	GRGCYC	4 cut(s)	1851, 2187, 2226, 2793
BauI	CACGAG	2 cut(s)	1850, 2792
BbrPI	CACGTG	1 cut(s)	1136
BbsI	GAAGAC	3 cut(s)	84, 1191, 2167
Bbv12I	GWGCWC	6 cut(s)	1147, 1611, 1851, 2034, 2226, 2793
BbvCI	CCTCAGC	1 cut(s)	324
BcgI	CGANNNNNNTGC	4 cut(s)	83, 117, 1493, 1527
BciT130I	CCWGG	3 cut(s)	63, 264, 2597
BciVI	GTATCC	1 cut(s)	1957
BcnI	CCSGG	2 cut(s)	2493, 2826
BcoDI	GTCTC	7 cut(s)	416, 728, 852, 1724, 1956, 2530, 2570
BfaI	CTAG	4 cut(s)	918, 1682, 2462, 2775
BfmI	CTRYAG	2 cut(s)	1707, 2651
BfrI	CTTAAG	2 cut(s)	479, 763
BfuAI	ACCTGC	2 cut(s)	1711, 2594
BfuI	GTATCC	1 cut(s)	1957
BglI	GCCNNNNNGGC	1 cut(s)	2116
BglII	AGATCT	1 cut(s)	958
BlpI	GCTNAGC	4 cut(s)	42, 305, 1460, 2787
BmcAI	AGTACT	1 cut(s)	2201
Bme1390I	CCNGG	5 cut(s)	63, 264, 2493, 2597, 2826
Bme18I	GGWCC	3 cut(s)	1484, 1908, 1928
BmeT110I	CYCGRG	2 cut(s)	1789, 2225
BmgBI	CACGTC	4 cut(s)	770, 1148, 1606, 2734
BmgT120I	GGNCC	3 cut(s)	1484, 1908, 1928
BmiI	GGNNCC	4 cut(s)	261, 1221, 1909, 2184
BmrFI	CCNGG	5 cut(s)	63, 264, 2493, 2597, 2826
BmsI	GCATC	7 cut(s)	28, 91, 463, 1030, 1369, 1789, 2098
BmtI	GCTAGC	1 cut(s)	1685
BpiI	GAAGAC	3 cut(s)	84, 1191, 2167
BpmI	CTGGAG	1 cut(s)	2579
Bpu10I	CCTNAGC	3 cut(s)	47, 324, 2106
Bpu1102I	GCTNAGC	4 cut(s)	42, 305, 1460, 2787
BpuEI	CTTGAG	8 cut(s)	248, 350, 413, 1247, 1824, 2096, 2659, 2690
BpuMI	CCSGG	2 cut(s)	2493, 2826
Bsa29I	ATCGAT	1 cut(s)	118
BsaAI	YACGTR	1 cut(s)	1136
BsaHI	GRCGYC	1 cut(s)	2584
BsaI	GGTCTC	2 cut(s)	852, 2570
BsaJI	CCNNGG	3 cut(s)	263, 1894, 2306
BsaWI	WCCGGW	4 cut(s)	1486, 1960, 2095, 2885
BsaXI	ACNNNNNCTCC	2 cut(s)	2574, 2604
Bsc4I	CCNNNNNNNGG	5 cut(s)	1481, 1734, 1974, 2279, 2596
Bse118I	RCCGGY	3 cut(s)	345, 2095, 2885
Bse1I	ACTGG	1 cut(s)	117
Bse3DI	GCAATG	1 cut(s)	997
BseAI	TCCGGA	1 cut(s)	1960
BseBI	CCWGG	3 cut(s)	63, 264, 2597
BseCI	ATCGAT	1 cut(s)	118
BseDI	CCNNGG	3 cut(s)	263, 1894, 2306
BseGI	GGATG	9 cut(s)	160, 514, 723, 855, 1045, 1384, 2089, 2137, 2244
BseLI	CCNNNNNNNGG	5 cut(s)	1481, 1734, 1974, 2279, 2596
BseMI	GCAATG	1 cut(s)	997
BseNI	ACTGG	1 cut(s)	117
BseRI	GAGGAG	7 cut(s)	245, 675, 1935, 2379, 2510, 2579, 2582
BseSI	GKGCMC	1 cut(s)	1147
BsgI	GTGCAG	1 cut(s)	1032
Bsh1236I	CGCG	4 cut(s)	877, 1190, 1632, 2379
BshFI	GGCC	5 cut(s)	392, 1320, 1589, 2437, 2746
BshTI	ACCGGT	2 cut(s)	2095, 2885
BshVI	ATCGAT	1 cut(s)	118
BsiHKAI	GWGCWC	6 cut(s)	1147, 1611, 1851, 2034, 2226, 2793
BsiHKCI	CYCGRG	2 cut(s)	1789, 2225
BsiSI	CCGG	8 cut(s)	346, 1487, 1961, 2096, 2493, 2743, 2825, 2886
BslFI	GGGAC	4 cut(s)	1130, 1649, 1921, 2841
BslI	CCNNNNNNNGG	5 cut(s)	1481, 1734, 1974, 2279, 2596
BsmAI	GTCTC	7 cut(s)	416, 728, 852, 1724, 1956, 2530, 2570
BsmBI	CGTCTC	2 cut(s)	1724, 2530
BsmFI	GGGAC	4 cut(s)	1130, 1649, 1921, 2841
BsmI	GAATGC	4 cut(s)	182, 1640, 2091, 2369
BsnI	GGCC	5 cut(s)	392, 1320, 1589, 2437, 2746
Bso31I	GGTCTC	2 cut(s)	852, 2570
BsoBI	CYCGRG	2 cut(s)	1789, 2225
Bsp1286I	GDGCHC	7 cut(s)	1147, 1611, 1851, 2034, 2187, 2226, 2793
Bsp13I	TCCGGA	1 cut(s)	1960
Bsp1407I	TGTACA	2 cut(s)	1125, 2424
Bsp1720I	GCTNAGC	4 cut(s)	42, 305, 1460, 2787
BspANI	GGCC	5 cut(s)	392, 1320, 1589, 2437, 2746
BspDI	ATCGAT	1 cut(s)	118
BspEI	TCCGGA	1 cut(s)	1960
BspFNI	CGCG	4 cut(s)	877, 1190, 1632, 2379
BspHI	TCATGA	1 cut(s)	1770
BspLI	GGNNCC	4 cut(s)	261, 1221, 1909, 2184
BspMAI	CTGCAG	2 cut(s)	1711, 2655
BspMI	ACCTGC	2 cut(s)	1711, 2594
BspOI	GCTAGC	1 cut(s)	1685
BspQI	GCTCTTC	2 cut(s)	1839, 2022
BspTI	CTTAAG	2 cut(s)	479, 763
BspTNI	GGTCTC	2 cut(s)	852, 2570
BsrDI	GCAATG	1 cut(s)	997
BsrFI	RCCGGY	3 cut(s)	345, 2095, 2885
BsrGI	TGTACA	2 cut(s)	1125, 2424
BsrI	ACTGG	1 cut(s)	117
BssAI	RCCGGY	3 cut(s)	345, 2095, 2885
BssECI	CCNNGG	3 cut(s)	263, 1894, 2306
BssNI	GRCGYC	1 cut(s)	2584
BssSI	CACGAG	2 cut(s)	1850, 2792
Bst2BI	CACGAG	2 cut(s)	1850, 2792
Bst2UI	CCWGG	3 cut(s)	63, 264, 2597
Bst4CI	ACNGT	8 cut(s)	493, 863, 1912, 1993, 2016, 2165, 2396, 2842
BstACI	GRCGYC	1 cut(s)	2584
BstAFI	CTTAAG	2 cut(s)	479, 763
BstAPI	GCANNNNNTGC	3 cut(s)	1706, 2086, 2650
BstAUI	TGTACA	2 cut(s)	1125, 2424
BstBAI	YACGTR	1 cut(s)	1136
BstC8I	GCNNGC	5 cut(s)	1143, 1286, 1611, 1683, 2298
BstDSI	CCRYGG	2 cut(s)	1894, 2306
BstEII	GGTNACC	1 cut(s)	2627
BstENI	CCTNNNNNAGG	1 cut(s)	2594
BstF5I	GGATG	9 cut(s)	160, 514, 723, 855, 1045, 1384, 2089, 2137, 2244
BstFNI	CGCG	4 cut(s)	877, 1190, 1632, 2379
BstHHI	GCGC	1 cut(s)	826
BstMAI	GTCTC	7 cut(s)	416, 728, 852, 1724, 1956, 2530, 2570
BstNI	CCWGG	3 cut(s)	63, 264, 2597
BstNSI	RCATGY	2 cut(s)	304, 2413
BstPI	GGTNACC	1 cut(s)	2627
BstSCI	CCNGG	5 cut(s)	61, 262, 2491, 2595, 2824
BstSFI	CTRYAG	2 cut(s)	1707, 2651
BstSLI	GKGCMC	1 cut(s)	1147
BstUI	CGCG	4 cut(s)	877, 1190, 1632, 2379
BstV2I	GAAGAC	3 cut(s)	84, 1191, 2167
BstX2I	RGATCY	6 cut(s)	259, 958, 1489, 2310, 2488, 2712
BstXI	CCANNNNNNTGG	1 cut(s)	554
BstYI	RGATCY	6 cut(s)	259, 958, 1489, 2310, 2488, 2712
Bsu15I	ATCGAT	1 cut(s)	118
BsuI	GTATCC	1 cut(s)	1957
BsuRI	GGCC	5 cut(s)	392, 1320, 1589, 2437, 2746
BsuTUI	ATCGAT	1 cut(s)	118
BtgI	CCRYGG	2 cut(s)	1894, 2306
BtrI	CACGTC	4 cut(s)	770, 1148, 1606, 2734
BtsCI	GGATG	9 cut(s)	160, 514, 723, 855, 1045, 1384, 2089, 2137, 2244
BtsI	GCAGTG	1 cut(s)	1590
BtsIMutI	CAGTG	4 cut(s)	216, 1590, 1644, 2151
BveI	ACCTGC	2 cut(s)	1711, 2594
Cac8I	GCNNGC	5 cut(s)	1143, 1286, 1611, 1683, 2298
CaiI	CAGNNNCTG	1 cut(s)	2786
CciI	TCATGA	1 cut(s)	1770
CfoI	GCGC	1 cut(s)	826
Cfr10I	RCCGGY	3 cut(s)	345, 2095, 2885
Cfr13I	GGNCC	3 cut(s)	1484, 1908, 1928
ClaI	ATCGAT	1 cut(s)	118
CseI	GACGC	4 cut(s)	586, 1196, 1399, 2592
Csp6I	GTAC	6 cut(s)	97, 1126, 1738, 1780, 2200, 2425
CspAI	ACCGGT	2 cut(s)	2095, 2885
CviQI	GTAC	6 cut(s)	97, 1126, 1738, 1780, 2200, 2425
DraI	TTTAAA	1 cut(s)	786
EaeI	YGGCCR	3 cut(s)	1587, 2435, 2744
EciI	GGCGGA	1 cut(s)	870
Ecl136II	GAGCTC	3 cut(s)	1849, 2224, 2791
Eco147I	AGGCCT	1 cut(s)	392
Eco24I	GRGCYC	4 cut(s)	1851, 2187, 2226, 2793
Eco31I	GGTCTC	2 cut(s)	852, 2570
Eco32I	GATATC	1 cut(s)	1342
Eco47I	GGWCC	3 cut(s)	1484, 1908, 1928
Eco53kI	GAGCTC	3 cut(s)	1849, 2224, 2791
Eco57I	CTGAAG	7 cut(s)	96, 119, 480, 909, 2036, 2175, 2550
Eco72I	CACGTG	1 cut(s)	1136
Eco88I	CYCGRG	2 cut(s)	1789, 2225
Eco91I	GGTNACC	1 cut(s)	2627
EcoICRI	GAGCTC	3 cut(s)	1849, 2224, 2791
EcoNI	CCTNNNNNAGG	1 cut(s)	2594
EcoO65I	GGTNACC	1 cut(s)	2627
EcoRI	GAATTC	2 cut(s)	164, 1058
EcoRII	CCWGG	3 cut(s)	61, 262, 2595
EcoRV	GATATC	1 cut(s)	1342
EcoT22I	ATGCAT	1 cut(s)	2091
EcoT38I	GRGCYC	4 cut(s)	1851, 2187, 2226, 2793
Esp3I	CGTCTC	2 cut(s)	1724, 2530
FaqI	GGGAC	4 cut(s)	1130, 1649, 1921, 2841
FauI	CCCGC	3 cut(s)	882, 1457, 1631
FokI	GGATG	9 cut(s)	167, 501, 730, 862, 1052, 1391, 2076, 2144, 2251
FriOI	GRGCYC	4 cut(s)	1851, 2187, 2226, 2793
FspBI	CTAG	4 cut(s)	918, 1682, 2462, 2775
GlaI	GCGC	1 cut(s)	825
GsuI	CTGGAG	1 cut(s)	2579
HaeIII	GGCC	5 cut(s)	392, 1320, 1589, 2437, 2746
HapII	CCGG	8 cut(s)	346, 1487, 1961, 2096, 2493, 2743, 2825, 2886
HgaI	GACGC	4 cut(s)	586, 1196, 1399, 2592
HhaI	GCGC	1 cut(s)	826
Hin1I	GRCGYC	1 cut(s)	2584
Hin6I	GCGC	1 cut(s)	824
HinP1I	GCGC	1 cut(s)	824
HincII	GTYRAC	4 cut(s)	496, 775, 1311, 2566
HindII	GTYRAC	4 cut(s)	496, 775, 1311, 2566
HindIII	AAGCTT	3 cut(s)	86, 224, 2725
HpaI	GTTAAC	1 cut(s)	2566
HpaII	CCGG	8 cut(s)	346, 1487, 1961, 2096, 2493, 2743, 2825, 2886
HphI	GGTGA	6 cut(s)	386, 1271, 2012, 2561, 2639, 2842
Hpy166II	GTNNAC	9 cut(s)	496, 775, 1145, 1311, 1928, 2270, 2322, 2552, 2566
Hpy8I	GTNNAC	9 cut(s)	496, 775, 1145, 1311, 1928, 2270, 2322, 2552, 2566
Hpy99I	CGWCG	2 cut(s)	537, 1393
HpyAV	CCTTC	7 cut(s)	552, 1563, 1849, 2229, 2383, 2618, 2851
HpyCH4III	ACNGT	8 cut(s)	493, 863, 1912, 1993, 2016, 2165, 2396, 2842
HpyCH4IV	ACGT	9 cut(s)	769, 1018, 1135, 1147, 1176, 1605, 2266, 2685, 2733
HpySE526I	ACGT	9 cut(s)	769, 1018, 1135, 1147, 1176, 1605, 2266, 2685, 2733
Hsp92I	GRCGYC	1 cut(s)	2584
HspAI	GCGC	1 cut(s)	824
Kpn2I	TCCGGA	1 cut(s)	1960
KspAI	GTTAAC	1 cut(s)	2566
LguI	GCTCTTC	2 cut(s)	1839, 2022
LmnI	GCTCC	7 cut(s)	64, 232, 549, 1219, 1600, 2182, 2366
LweI	GCATC	7 cut(s)	28, 91, 463, 1030, 1369, 1789, 2098
MaeI	CTAG	4 cut(s)	918, 1682, 2462, 2775
MaeII	ACGT	9 cut(s)	769, 1018, 1135, 1147, 1176, 1605, 2266, 2685, 2733
MfeI	CAATTG	3 cut(s)	273, 1979, 2454
MflI	RGATCY	6 cut(s)	259, 958, 1489, 2310, 2488, 2712
MhlI	GDGCHC	7 cut(s)	1147, 1611, 1851, 2034, 2187, 2226, 2793
MlsI	TGGCCA	2 cut(s)	1589, 2437
MluCI	AATT	8 cut(s)	13, 164, 273, 1058, 1979, 2145, 2454, 2496
MluI	ACGCGT	1 cut(s)	2377
MluNI	TGGCCA	2 cut(s)	1589, 2437
MlyI	GAGTC	9 cut(s)	418, 448, 1781, 1831, 1884, 2041, 2297, 2317, 2780
MmeI	TCCRAC	4 cut(s)	321, 1404, 1503, 1894
Mox20I	TGGCCA	2 cut(s)	1589, 2437
Mph1103I	ATGCAT	1 cut(s)	2091
MroI	TCCGGA	1 cut(s)	1960
MroXI	GAANNNNTTC	3 cut(s)	168, 2535, 2556
MscI	TGGCCA	2 cut(s)	1589, 2437
MseI	TTAA	8 cut(s)	357, 447, 480, 506, 764, 785, 2565, 2890
MslI	CAYNNNNRTG	2 cut(s)	1202, 1368
Msp20I	TGGCCA	2 cut(s)	1589, 2437
MspA1I	CMGCKG	4 cut(s)	194, 1817, 2066, 2783
MspCI	CTTAAG	2 cut(s)	479, 763
MspI	CCGG	8 cut(s)	346, 1487, 1961, 2096, 2493, 2743, 2825, 2886
MspR9I	CCNGG	5 cut(s)	63, 264, 2493, 2597, 2826
MunI	CAATTG	3 cut(s)	273, 1979, 2454
Mva1269I	GAATGC	4 cut(s)	182, 1640, 2091, 2369
MvaI	CCWGG	3 cut(s)	63, 264, 2597
MvnI	CGCG	4 cut(s)	877, 1190, 1632, 2379
NciI	CCSGG	2 cut(s)	2493, 2826
NheI	GCTAGC	1 cut(s)	1681
NlaIV	GGNNCC	4 cut(s)	261, 1221, 1909, 2184
NmuCI	GTSAC	7 cut(s)	280, 1259, 2449, 2606, 2627, 2660, 2717
NsiI	ATGCAT	1 cut(s)	2091
NspI	RCATGY	2 cut(s)	304, 2413
OliI	CACNNNNGTG	1 cut(s)	1202
PaeR7I	CTCGAG	1 cut(s)	2225
PagI	TCATGA	1 cut(s)	1770
PaqCI	CACCTGC	1 cut(s)	1711
PceI	AGGCCT	1 cut(s)	392
PciSI	GCTCTTC	2 cut(s)	1839, 2022
PcsI	WCGNNNNNNNCGW	1 cut(s)	1015
PctI	GAATGC	4 cut(s)	182, 1640, 2091, 2369
PdmI	GAANNNNTTC	3 cut(s)	168, 2535, 2556
PflMI	CCANNNNNTGG	1 cut(s)	1734
PfoI	TCCNGGA	1 cut(s)	2491
PinAI	ACCGGT	2 cut(s)	2095, 2885
PleI	GAGTC	9 cut(s)	418, 448, 1781, 1831, 1883, 2041, 2296, 2317, 2779
PmaCI	CACGTG	1 cut(s)	1136
PmlI	CACGTG	1 cut(s)	1136
PpsI	GAGTC	9 cut(s)	418, 448, 1781, 1831, 1883, 2041, 2296, 2317, 2779
Ppu21I	YACGTR	1 cut(s)	1136
Psp124BI	GAGCTC	3 cut(s)	1851, 2226, 2793
Psp6I	CCWGG	3 cut(s)	61, 262, 2595
PspCI	CACGTG	1 cut(s)	1136
PspEI	GGTNACC	1 cut(s)	2627
PspGI	CCWGG	3 cut(s)	61, 262, 2595
PspN4I	GGNNCC	4 cut(s)	261, 1221, 1909, 2184
PspPI	GGNCC	3 cut(s)	1484, 1908, 1928
PspXI	VCTCGAGB	1 cut(s)	2225
PsrI	GAACNNNNNNTAC	2 cut(s)	673, 705
PstI	CTGCAG	2 cut(s)	1711, 2655
PstNI	CAGNNNCTG	1 cut(s)	2786
PsuI	RGATCY	6 cut(s)	259, 958, 1489, 2310, 2488, 2712
PvuII	CAGCTG	2 cut(s)	194, 2066
RsaI	GTAC	6 cut(s)	98, 1127, 1739, 1781, 2201, 2426
RsaNI	GTAC	6 cut(s)	97, 1126, 1738, 1780, 2200, 2425
RseI	CAYNNNNRTG	2 cut(s)	1202, 1368
SacI	GAGCTC	3 cut(s)	1851, 2226, 2793
SapI	GCTCTTC	2 cut(s)	1839, 2022
SaqAI	TTAA	8 cut(s)	357, 447, 480, 506, 764, 785, 2565, 2890
Sau96I	GGNCC	3 cut(s)	1484, 1908, 1928
ScaI	AGTACT	1 cut(s)	2201
SchI	GAGTC	9 cut(s)	418, 448, 1781, 1831, 1884, 2041, 2297, 2317, 2780
ScrFI	CCNGG	5 cut(s)	63, 264, 2493, 2597, 2826
SduI	GDGCHC	7 cut(s)	1147, 1611, 1851, 2034, 2187, 2226, 2793
SfaNI	GCATC	7 cut(s)	28, 91, 463, 1030, 1369, 1789, 2098
SfcI	CTRYAG	2 cut(s)	1707, 2651
Sfr274I	CTCGAG	1 cut(s)	2225
SinI	GGWCC	3 cut(s)	1484, 1908, 1928
SlaI	CTCGAG	1 cut(s)	2225
SmiMI	CAYNNNNRTG	2 cut(s)	1202, 1368
Sse9I	AATT	8 cut(s)	13, 164, 273, 1058, 1979, 2145, 2454, 2496
SseBI	AGGCCT	1 cut(s)	392
SspMI	CTAG	4 cut(s)	918, 1682, 2462, 2775
SstI	GAGCTC	3 cut(s)	1851, 2226, 2793
StuI	AGGCCT	1 cut(s)	392
StyD4I	CCNGG	5 cut(s)	61, 262, 2491, 2595, 2824
TaaI	ACNGT	8 cut(s)	493, 863, 1912, 1993, 2016, 2165, 2396, 2842
TaiI	ACGT	9 cut(s)	772, 1021, 1138, 1150, 1179, 1608, 2269, 2688, 2736
TaqI	TCGA	9 cut(s)	93, 118, 126, 624, 1674, 2226, 2286, 2466, 2560
TaqII	GACCGA	1 cut(s)	525
TasI	AATT	8 cut(s)	13, 164, 273, 1058, 1979, 2145, 2454, 2496
TatI	WGTACW	3 cut(s)	1125, 2199, 2424
TauI	GCSGC	3 cut(s)	1820, 2504, 2786
Tru1I	TTAA	8 cut(s)	357, 447, 480, 506, 764, 785, 2565, 2890
Tru9I	TTAA	8 cut(s)	357, 447, 480, 506, 764, 785, 2565, 2890
TscAI	CASTG	4 cut(s)	223, 1597, 1651, 2158
TseFI	GTSAC	7 cut(s)	280, 1259, 2449, 2606, 2627, 2660, 2717
Tsp45I	GTSAC	7 cut(s)	280, 1259, 2449, 2606, 2627, 2660, 2717
TspDTI	ATGAA	7 cut(s)	642, 684, 717, 1961, 2148, 2255, 2870
TspGWI	ACGGA	7 cut(s)	419, 1334, 1887, 1911, 2195, 2435, 2705
TspRI	CASTG	4 cut(s)	223, 1597, 1651, 2158
Van91I	CCANNNNNTGG	1 cut(s)	1734
Vha464I	CTTAAG	2 cut(s)	479, 763
VneI	GTGCAC	1 cut(s)	1143
VpaK11BI	GGWCC	3 cut(s)	1484, 1908, 1928
XagI	CCTNNNNNAGG	1 cut(s)	2594
XapI	RAATTY	3 cut(s)	13, 164, 1058
XceI	RCATGY	2 cut(s)	304, 2413
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1901
XhoI	CTCGAG	1 cut(s)	2225
XmnI	GAANNNNTTC	3 cut(s)	168, 2535, 2556
XspI	CTAG	4 cut(s)	918, 1682, 2462, 2775
ZrmI	AGTACT	1 cut(s)	2201
Zsp2I	ATGCAT	1 cut(s)	2091

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.