Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0005600

Physical Location & Seq

Genomic Coordinates Forward (+)

40530313 .. 40535966

Gene Structure 5654 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00114470.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2886 bp

ATGGCAGCGAGGAACTTGGAGAAGATGGCTTCAATTGATGCACAGCTGAGGCTGTTGGCACCAGGAAAGGTGTCTGAGGATGACAAACTGATCGAGTACGATGCTTTGTTGTTGGATCGCTTCCTCGATATTCTTCAGGATTTACATGGGGAGGATCTCAGAGAAACGGTTCAAGATTGTTATGAGCTATCCGCGGAATACGAAGGAAAGCAGGACCCGAAAAAGTTGGAGGAACTTGGAAATGTGTTTACAAGTTTGGATCCTGGTGACTCCATTGTTGTTGCCAAGTCTTTTTCCCACATGCTTAACTTGGCCAATTTGGCTGAAGAAGTTCAGATTGCATATCGGAGAAGGATAAAGTTGAAGAAGGGAGACTTTGTTGATGAAGCAAGTGCTACAACAGAGTCGGACATTGAAGAGACGTTCAAGAAGCTTGTGGGGCAACTGAAGAAGTCCCCACAAGAAGTTTTTGATGAATTGAAGAACCAGACTGTAGATTTGGTTCTAACCGCACATCCTACTCAGTCTGTTCGCAGATCTCTGCTTCAAAAGCATGCAAGGGTAAGAAATTGTTTGACACAGTTGTATGCCAAGGATATTACACCTGATGATAAACAAGAACTCGATGAGGCTCTACAAAGGGAGATTCAAGCTGCATTTCGCACTGATGAAATCCGAAGGACTCCTCCAACCCCTCAAGATGAGATGAGGGCAGGAATGAGCTACTTTCATGAGACGATTTGGAAAGGTGTACCCAAATTCTTACGCCGAGTTGACACTGCCTTGAAAAACATTGGGATAAATGAACGTGTTCCTTACAATGCCCCTCTCATTCAATTTTCTTCTTGGATGGGTGGGGATCGTGATGGAAATCCGAGGGTCACTCCAGAAGTTACACGGGATGTATGCTTATTGGCTAGAATGATGGCTGCTAACTTGTATTTCTCCCAGATAGAGGATCTTATGTTTGAGTTATCTATGTGGCGTTGCAACGATGAGCTTCTTGCTCGTGCTCGTGAACTTCATAGGTCTTCAAGGAAGGATGCAAAACACTATATAGAGTTTTGGAAACAAATTCCTCCAAATGAGCCATATCGTGTTATTCTTGGTGAAGTGAGAGACAAACTCTACAATACACGTGAACGTGCTCGTCAATTACTATCCAATGGAACCTCTGACATTCCTGAGGACACAACTTTTACTAACGTTGAACAGTTCCTGGAGCCTCTCGAACTGTGTTACCGGTCACTCTGTTCCTGTGGTGACAAGCCAATTGCTGACGGTAGCCTTCTTGATTTCTTACGGCAAGTTTCTACTTTCGGACTTTGTCTTGTGAGACTAGACATACGGCAAGAATCAGACAGGCACACTGATGTCATTGATGCTATTACAAAGCACCTGGGCCTTGGGTCTTATCGAGAATGGCCTGAGAAACAAAGGCAAGAATGGCTGTTGTCTGAGCTCAGTGGAAAGCGCCCTCTTTTTGGCACTGATGTTCCCAAGACTGAAGAAATTTCTGATGTATTGGAGACATTCAAAGTCATTTCAGAACTTCCCTCAGACAACTTTGGTGCCTATATCATATCAATGGCAACAGCCCCATCTGATGTACTTGCTGTTGAGCTTTTACAACGTGAATGCCGTGTGAAAAAGCCACTACGGGTTGTTCCATTGTTTGAGAAGCTTGCTGATTTAGAGGCTGCTCCTGCTGCTGTGGCTCGCCTCTTCTCTATAGATTGGTACAAAAACCGGATCAATGGGAAGCAAGAAGTCATGATAGGGTACTCAGATTCAGGAAAGGATGCAGGCCGTCTATCCGCAGCATGGCAGCTATACAAGGCTCAAGAAGAGCTCATAAAGGTTGCGAAACAATATGGAGTTAAGCTTACCATGTTTCATGGCCGAGGTGGAACAGTTGGAAGAGGAGGAGGACCCACTCATCTTGCTATATTGTCTCAGCCACCTGAGACAATTCACGGTTCACTCCGTGTAACAGTTCAAGGTGAAGTTATTGAACAATCATTTGGAGAGGAGCACTTGTGTTTTAGAACACTTCAGCGTTTCACAGCAGCCACACTAGAGCATGGTATGAATCCCCCAGTTTCGCCCAAGCCAGAATGGCGTGCGCTCATGGATGAGATGGCAGTTGTTGCTACGGAGGAATACCGTTCAATAGTTTTCCAGGAACCCCGTTTTGTTGAATACTTTCGCCTTGCAACACCAGAGATGGAGTATGGTCGGATGAACATTGGGAGTCGTCCATCAAAGCGAAAGCCAAGTGGAGGCATTGAATCACTTCGAGCAATCCCATGGATCTTTGCATGGACCCAGACAAGATTTCACTTACCAGTGTGGCTTGGTTTTGGGGCAGCATTTAAGCAAGCCTTAGAGAAGGATGCAAAGAATCTTCAGATGCTTCGGGAGATGTATAATCAGTGGCCTTTCTTCAGAGTCACCATTGATTTAATTGAGATGGTGTTTGCCAAGGGAGACCCAGGTATTACAGCTCTTTATGACAAGCTTCTGGTGTCAGAAGACCTATGGTCATTTGGAGAGCGACTGAGGACCAACTATGAAGATACTAAACGCCTCCTACTCCAGGTTGCTGGGCACAGAAATCTTCTGGAAGGAGATCCTTACCTGAGGCAGAGACTTCTTCTTCGTGACTCGTATATTACGACACTAAATGTGTGCCAAGCCTATACGCTGAAGCAGATCCGTGACCCCAACTATCATGGTCAAGTAAGGCCATTAAAGGAACCAGCAAGCAAGCCAGCAGCAGAGCTCGTCAATCTTAACCCAACAAGCGAATATGCTCCAGGTCTAGAGGACACACTTATTTTGACCATGAAGGGTATTGCTGCTGGGATGCAGAACACTGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004611 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0007275 GO:0008150 GO:0008152 GO:0008964 GO:0009506 GO:0009507 GO:0009536 GO:0015977 GO:0016020 GO:0016829 GO:0016830 GO:0016831 GO:0030054 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0055044 GO:0071704 GO:0071944 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko00620 ko00680 ko00710 ko00720 ko01100 ko01120 ko01200 map00620 map00680 map00710 map00720 map01100 map01120 map01200

Pfam Domains

Protein Families

PEPcase

Protein Analysis

961

Amino Acids

109.66

Weight (kDa)

5.89

Isoelectric Point (pI)

43.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PEPcase	PF00311	34 - 961	0.0	Phosphoenolpyruvate carboxylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42600 AT2G42600 AT2G42600
fragaria_vesca	FvH4_6g27390 FvH4_6g27390 FvH4_6g27390 FvH4_6g33320
malus_domestica	MD09G1237900.v1.1 MD17G1230800.v1.1
prunus_persica	Prupe.3G118300_v2.0.a1
pyrus_communis	pycom09g15640 pycom17g23400
rosa_chinensis	RchiOBHm_Chr2g0090101 RchiOBHm_Chr2g0129661
rosa_laevigata	RLG00000016085 RLG00000019094
rosa_multiflora	Rmu_sc0008968.1_g000006 Rmu_sc0009263.1_g000005 Rmu_sc0020548.1_g000003
rosa_roxburghii	Rroxscaffold_2G00114470
rosa_rugosa	Rorug02G0005300 Rorug02G0288200
rosa_samantha	Rh2AG339500 Rh2BG348300 Rh2CG326900 Rh2DG366400
rosa_wichuraiana	Rw2G004560 Rw2G027850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	58, 1571
AccII	CGCG	1 cut(s)	194
AciI	CCGC	4 cut(s)	192, 194, 510, 1818
AclI	AACGTT	1 cut(s)	1206
AcoI	YGGCCR	2 cut(s)	312, 1900
AcsI	RAATTY	3 cut(s)	758, 1074, 1512
AcuI	CTGAAG	8 cut(s)	119, 345, 467, 1527, 2039, 2393, 2431, 2729
AcvI	CACGTG	1 cut(s)	1139
AdeI	CACNNNGTG	1 cut(s)	1988
AfaI	GTAC	5 cut(s)	98, 753, 1611, 1742, 1784
AfiI	CCNNNNNNNGG	5 cut(s)	955, 1484, 1824, 2282, 2599
AflIII	ACRYGT	2 cut(s)	808, 1136
AgeI	ACCGGT	1 cut(s)	1242
AhdI	GACNNNNNGTC	1 cut(s)	2542
AjnI	CCWGG	8 cut(s)	61, 262, 1218, 1398, 2181, 2494, 2598, 2818
AjuI	GAANNNNNNNTTGG	2 cut(s)	2007, 2039
Alw21I	GWGCWC	6 cut(s)	1015, 1150, 1464, 1854, 2037, 2787
AlwNI	CAGNNNCTG	1 cut(s)	1219
AoxI	GGCC	7 cut(s)	312, 1402, 1424, 1807, 1900, 2438, 2747
ApoI	RAATTY	3 cut(s)	758, 1074, 1512
ArsI	GACNNNNNNTTYG	4 cut(s)	481, 513, 2643, 2675
AsiGI	ACCGGT	1 cut(s)	1242
Asp700I	GAANNNNTTC	5 cut(s)	168, 330, 810, 2205, 2295
AspLEI	GCGC	2 cut(s)	1476, 2128
AspS9I	GGNCC	5 cut(s)	214, 1402, 1931, 2325, 2565
AsuHPI	GGTGA	5 cut(s)	278, 1121, 1274, 2015, 2446
AvaII	GGWCC	4 cut(s)	214, 1931, 2325, 2565
AxyI	CCTNAGG	2 cut(s)	1185, 2642
BaeGI	GKGCMC	1 cut(s)	2613
BalI	TGGCCA	1 cut(s)	314
BamHI	GGATCC	1 cut(s)	259
BanI	GGYRCC	2 cut(s)	58, 1571
BanII	GRGCYC	3 cut(s)	1464, 1854, 2787
BauI	CACGAG	2 cut(s)	1008, 1014
BbrPI	CACGTG	1 cut(s)	1139
BbsI	GAAGAC	2 cut(s)	1023, 2541
Bbv12I	GWGCWC	6 cut(s)	1015, 1150, 1464, 1854, 2037, 2787
BbvCI	CCTCAGC	1 cut(s)	47
BccI	CCATC	9 cut(s)	19, 844, 860, 919, 1609, 2134, 2221, 2269, 2467
BceAI	ACGGC	4 cut(s)	1319, 1364, 1626, 1794
BcgI	CGANNNNNNTGC	2 cut(s)	83, 117
BciT130I	CCWGG	8 cut(s)	63, 264, 1220, 1400, 2183, 2496, 2600, 2820
BfaI	CTAG	4 cut(s)	918, 1340, 2078, 2825
BfmI	CTRYAG	2 cut(s)	492, 1731
BfoI	RGCGCY	1 cut(s)	1477
BglI	GCCNNNNNGGC	2 cut(s)	320, 2119
BglII	AGATCT	1 cut(s)	536
Bme1390I	CCNGG	8 cut(s)	63, 264, 1220, 1400, 2183, 2496, 2600, 2820
Bme18I	GGWCC	4 cut(s)	214, 1931, 2325, 2565
BmeRI	GACNNNNNGTC	1 cut(s)	2542
BmgT120I	GGNCC	5 cut(s)	214, 1402, 1931, 2325, 2565
BmrFI	CCNGG	8 cut(s)	63, 264, 1220, 1400, 2183, 2496, 2600, 2820
BmrI	ACTGGG	1 cut(s)	2093
BmsI	GCATC	8 cut(s)	28, 91, 1033, 1372, 1792, 2386, 2403, 2859
BmuI	ACTGGG	1 cut(s)	2093
BpiI	GAAGAC	2 cut(s)	1023, 2541
BplI	GAGNNNNNCTC	4 cut(s)	868, 900, 1110, 1142
BpmI	CTGGAG	4 cut(s)	870, 1241, 2582, 2802
Bpu10I	CCTNAGC	1 cut(s)	47
BpuEI	CTTGAG	2 cut(s)	681, 1827
BsaAI	YACGTR	1 cut(s)	1139
BsaBI	GATNNNNATC	1 cut(s)	870
BsaI	GGTCTC	1 cut(s)	2484
BsaJI	CCNNGG	9 cut(s)	192, 591, 875, 1399, 1405, 1903, 2309, 2484, 2494
BsaWI	WCCGGW	2 cut(s)	1242, 1749
BsaXI	ACNNNNNCTCC	4 cut(s)	363, 393, 2024, 2054
Bsc4I	CCNNNNNNNGG	5 cut(s)	955, 1484, 1824, 2282, 2599
Bse118I	RCCGGY	1 cut(s)	1242
Bse1I	ACTGG	3 cut(s)	2099, 2348, 2884
Bse21I	CCTNAGG	2 cut(s)	1185, 2642
Bse8I	GATNNNNATC	1 cut(s)	870
BseBI	CCWGG	8 cut(s)	63, 264, 1220, 1400, 2183, 2496, 2600, 2820
BseDI	CCNNGG	9 cut(s)	192, 591, 875, 1399, 1405, 1903, 2309, 2484, 2494
BseJI	GATNNNNATC	1 cut(s)	870
BseLI	CCNNNNNNNGG	5 cut(s)	955, 1484, 1824, 2282, 2599
BseNI	ACTGG	3 cut(s)	2099, 2348, 2884
BseRI	GAGGAG	4 cut(s)	675, 1938, 1941, 2045
BseSI	GKGCMC	1 cut(s)	2613
BseYI	CCCAGC	2 cut(s)	2606, 2864
Bsh1236I	CGCG	1 cut(s)	194
BshFI	GGCC	7 cut(s)	314, 1404, 1426, 1809, 1902, 2440, 2749
BshNI	GGYRCC	2 cut(s)	58, 1571
BshTI	ACCGGT	1 cut(s)	1242
BsiHKAI	GWGCWC	6 cut(s)	1015, 1150, 1464, 1854, 2037, 2787
BsiSI	CCGG	2 cut(s)	1243, 1750
BslFI	GGGAC	1 cut(s)	439
BslI	CCNNNNNNNGG	5 cut(s)	955, 1484, 1824, 2282, 2599
BsmBI	CGTCTC	2 cut(s)	413, 728
BsmFI	GGGAC	1 cut(s)	439
BsmI	GAATGC	1 cut(s)	1643
BsnI	GGCC	7 cut(s)	314, 1404, 1426, 1809, 1902, 2440, 2749
Bso31I	GGTCTC	1 cut(s)	2484
Bsp1286I	GDGCHC	7 cut(s)	1015, 1150, 1464, 1854, 2037, 2613, 2787
Bsp19I	CCATGG	1 cut(s)	2309
BspACI	CCGC	4 cut(s)	192, 194, 510, 1818
BspANI	GGCC	7 cut(s)	314, 1404, 1426, 1809, 1902, 2440, 2749
BspFNI	CGCG	1 cut(s)	194
BspHI	TCATGA	2 cut(s)	730, 1773
BspQI	GCTCTTC	1 cut(s)	1842
BspT107I	GGYRCC	2 cut(s)	58, 1571
BspTNI	GGTCTC	1 cut(s)	2484
BsrFI	RCCGGY	1 cut(s)	1242
BsrI	ACTGG	3 cut(s)	2099, 2348, 2884
BssAI	RCCGGY	1 cut(s)	1242
BssECI	CCNNGG	9 cut(s)	192, 591, 875, 1399, 1405, 1903, 2309, 2484, 2494
BssSI	CACGAG	2 cut(s)	1008, 1014
BssT1I	CCWWGG	4 cut(s)	591, 1405, 2309, 2484
Bst2BI	CACGAG	2 cut(s)	1008, 1014
Bst2UI	CCWGG	8 cut(s)	63, 264, 1220, 1400, 2183, 2496, 2600, 2820
Bst6I	CTCTTC	4 cut(s)	411, 1730, 1842, 1915
BstAPI	GCANNNNNTGC	1 cut(s)	2150
BstBAI	YACGTR	1 cut(s)	1139
BstC8I	GCNNGC	9 cut(s)	555, 1686, 1720, 1807, 2124, 2382, 2767, 2771, 2775
BstDSI	CCRYGG	2 cut(s)	192, 2309
BstENI	CCTNNNNNAGG	1 cut(s)	2597
BstFNI	CGCG	1 cut(s)	194
BstH2I	RGCGCY	1 cut(s)	1477
BstHHI	GCGC	2 cut(s)	1476, 2128
BstMWI	GCNNNNNNNGC	9 cut(s)	320, 439, 550, 1447, 1706, 1709, 1715, 2119, 2150
BstNI	CCWGG	8 cut(s)	63, 264, 1220, 1400, 2183, 2496, 2600, 2820
BstNSI	RCATGY	2 cut(s)	304, 557
BstSCI	CCNGG	8 cut(s)	61, 262, 1218, 1398, 2181, 2494, 2598, 2818
BstSFI	CTRYAG	2 cut(s)	492, 1731
BstSLI	GKGCMC	1 cut(s)	2613
BstUI	CGCG	1 cut(s)	194
BstV2I	GAAGAC	2 cut(s)	1023, 2541
BstX2I	RGATCY	7 cut(s)	154, 259, 536, 958, 2313, 2632, 2715
BstXI	CCANNNNNNTGG	1 cut(s)	2606
BstYI	RGATCY	7 cut(s)	154, 259, 536, 958, 2313, 2632, 2715
Bsu36I	CCTNAGG	2 cut(s)	1185, 2642
BsuRI	GGCC	7 cut(s)	314, 1404, 1426, 1809, 1902, 2440, 2749
BtgI	CCRYGG	2 cut(s)	192, 2309
BtsI	GCAGTG	1 cut(s)	777
BtsIMutI	CAGTG	8 cut(s)	663, 777, 1368, 1471, 1488, 2355, 2441, 2877
Cac8I	GCNNGC	9 cut(s)	555, 1686, 1720, 1807, 2124, 2382, 2767, 2771, 2775
CaiI	CAGNNNCTG	1 cut(s)	1219
CciI	TCATGA	2 cut(s)	730, 1773
CfoI	GCGC	2 cut(s)	1476, 2128
Cfr10I	RCCGGY	1 cut(s)	1242
Cfr13I	GGNCC	5 cut(s)	214, 1402, 1931, 2325, 2565
Cfr42I	CCGCGG	1 cut(s)	195
Csp6I	GTAC	5 cut(s)	97, 752, 1610, 1741, 1783
CspAI	ACCGGT	1 cut(s)	1242
CspCI	CAANNNNNGTGG	2 cut(s)	1924, 1959
CviQI	GTAC	5 cut(s)	97, 752, 1610, 1741, 1783
DraIII	CACNNNGTG	1 cut(s)	1988
DriI	GACNNNNNGTC	1 cut(s)	2542
EaeI	YGGCCR	2 cut(s)	312, 1900
Eam1104I	CTCTTC	4 cut(s)	411, 1730, 1842, 1915
Eam1105I	GACNNNNNGTC	1 cut(s)	2542
EarI	CTCTTC	4 cut(s)	411, 1730, 1842, 1915
Ecl136II	GAGCTC	3 cut(s)	1462, 1852, 2785
Eco130I	CCWWGG	4 cut(s)	591, 1405, 2309, 2484
Eco24I	GRGCYC	3 cut(s)	1464, 1854, 2787
Eco31I	GGTCTC	1 cut(s)	2484
Eco47I	GGWCC	4 cut(s)	214, 1931, 2325, 2565
Eco53kI	GAGCTC	3 cut(s)	1462, 1852, 2785
Eco57I	CTGAAG	8 cut(s)	119, 345, 467, 1527, 2039, 2393, 2431, 2729
Eco72I	CACGTG	1 cut(s)	1139
Eco81I	CCTNAGG	2 cut(s)	1185, 2642
EcoICRI	GAGCTC	3 cut(s)	1462, 1852, 2785
EcoNI	CCTNNNNNAGG	1 cut(s)	2597
EcoO109I	RGGNCCY	2 cut(s)	214, 1931
EcoRII	CCWGG	8 cut(s)	61, 262, 1218, 1398, 2181, 2494, 2598, 2818
EcoT14I	CCWWGG	4 cut(s)	591, 1405, 2309, 2484
EcoT38I	GRGCYC	3 cut(s)	1464, 1854, 2787
ErhI	CCWWGG	4 cut(s)	591, 1405, 2309, 2484
Esp3I	CGTCTC	2 cut(s)	413, 728
FalI	AAGNNNNNCTT	4 cut(s)	359, 391, 2369, 2401
FaqI	GGGAC	1 cut(s)	439
FriOI	GRGCYC	3 cut(s)	1464, 1854, 2787
FspBI	CTAG	4 cut(s)	918, 1340, 2078, 2825
GlaI	GCGC	2 cut(s)	1475, 2127
GsaI	CCCAGC	2 cut(s)	2610, 2868
GsuI	CTGGAG	4 cut(s)	870, 1241, 2582, 2802
HaeII	RGCGCY	1 cut(s)	1477
HaeIII	GGCC	7 cut(s)	314, 1404, 1426, 1809, 1902, 2440, 2749
HapII	CCGG	2 cut(s)	1243, 1750
HhaI	GCGC	2 cut(s)	1476, 2128
Hin6I	GCGC	2 cut(s)	1474, 2126
HinP1I	GCGC	2 cut(s)	1474, 2126
HincII	GTYRAC	1 cut(s)	775
HindII	GTYRAC	1 cut(s)	775
HindIII	AAGCTT	4 cut(s)	431, 1682, 1883, 2519
HpaII	CCGG	2 cut(s)	1243, 1750
HphI	GGTGA	5 cut(s)	278, 1121, 1274, 2015, 2446
Hpy166II	GTNNAC	6 cut(s)	249, 752, 775, 1019, 1142, 1982
Hpy8I	GTNNAC	6 cut(s)	249, 752, 775, 1019, 1142, 1982
HpyAV	CCTTC	9 cut(s)	197, 345, 361, 672, 1033, 1298, 2386, 2621, 2845
HpyCH4IV	ACGT	6 cut(s)	422, 808, 1138, 1144, 1206, 1633
HpyF10VI	GCNNNNNNNGC	9 cut(s)	320, 439, 550, 1447, 1706, 1709, 1715, 2119, 2150
HpySE526I	ACGT	6 cut(s)	422, 808, 1138, 1144, 1206, 1633
HspAI	GCGC	2 cut(s)	1474, 2126
KspI	CCGCGG	1 cut(s)	195
LguI	GCTCTTC	1 cut(s)	1842
LmnI	GCTCC	4 cut(s)	1222, 1708, 2032, 2821
LweI	GCATC	8 cut(s)	28, 91, 1033, 1372, 1792, 2386, 2403, 2859
MaeI	CTAG	4 cut(s)	918, 1340, 2078, 2825
MaeII	ACGT	6 cut(s)	422, 808, 1138, 1144, 1206, 1633
MfeI	CAATTG	2 cut(s)	33, 1272
MflI	RGATCY	7 cut(s)	154, 259, 536, 958, 2313, 2632, 2715
MhlI	GDGCHC	7 cut(s)	1015, 1150, 1464, 1854, 2037, 2613, 2787
MlsI	TGGCCA	1 cut(s)	314
MluNI	TGGCCA	1 cut(s)	314
MlyI	GAGTC	6 cut(s)	263, 413, 676, 2263, 2460, 2660
MmeI	TCCRAC	6 cut(s)	93, 207, 387, 713, 1897, 2219
Mox20I	TGGCCA	1 cut(s)	314
MroXI	GAANNNNTTC	5 cut(s)	168, 330, 810, 2205, 2295
MscI	TGGCCA	1 cut(s)	314
MseI	TTAA	6 cut(s)	306, 1881, 2376, 2465, 2753, 2796
MslI	CAYNNNNRTG	2 cut(s)	1371, 1586
Msp20I	TGGCCA	1 cut(s)	314
MspA1I	CMGCKG	2 cut(s)	46, 194
MspI	CCGG	2 cut(s)	1243, 1750
MspR9I	CCNGG	8 cut(s)	63, 264, 1220, 1400, 2183, 2496, 2600, 2820
MunI	CAATTG	2 cut(s)	33, 1272
Mva1269I	GAATGC	1 cut(s)	1643
MvaI	CCWGG	8 cut(s)	63, 264, 1220, 1400, 2183, 2496, 2600, 2820
MvnI	CGCG	1 cut(s)	194
MwoI	GCNNNNNNNGC	9 cut(s)	320, 439, 550, 1447, 1706, 1709, 1715, 2119, 2150
NcoI	CCATGG	1 cut(s)	2309
NmeAIII	GCCGAG	2 cut(s)	794, 1928
NmuCI	GTSAC	7 cut(s)	266, 880, 1245, 1262, 2452, 2663, 2720
NspI	RCATGY	2 cut(s)	304, 557
PaeI	GCATGC	1 cut(s)	557
PagI	TCATGA	2 cut(s)	730, 1773
PciSI	GCTCTTC	1 cut(s)	1842
PcsI	WCGNNNNNNNCGW	2 cut(s)	1639, 2675
PctI	GAATGC	1 cut(s)	1643
PdmI	GAANNNNTTC	5 cut(s)	168, 330, 810, 2205, 2295
PfeI	GAWTC	6 cut(s)	646, 1355, 1790, 2092, 2291, 2404
PflFI	GACNNNGTC	1 cut(s)	1326
PfoI	TCCNGGA	2 cut(s)	1218, 2181
PinAI	ACCGGT	1 cut(s)	1242
PleI	GAGTC	6 cut(s)	263, 412, 676, 2262, 2459, 2660
PmaCI	CACGTG	1 cut(s)	1139
PmlI	CACGTG	1 cut(s)	1139
PpsI	GAGTC	6 cut(s)	263, 412, 676, 2262, 2459, 2660
Ppu21I	YACGTR	1 cut(s)	1139
PpuMI	RGGWCCY	2 cut(s)	214, 1931
Psp124BI	GAGCTC	3 cut(s)	1464, 1854, 2787
Psp1406I	AACGTT	1 cut(s)	1206
Psp5II	RGGWCCY	2 cut(s)	214, 1931
Psp6I	CCWGG	8 cut(s)	61, 262, 1218, 1398, 2181, 2494, 2598, 2818
PspCI	CACGTG	1 cut(s)	1139
PspFI	CCCAGC	2 cut(s)	2606, 2864
PspGI	CCWGG	8 cut(s)	61, 262, 1218, 1398, 2181, 2494, 2598, 2818
PspPI	GGNCC	5 cut(s)	214, 1402, 1931, 2325, 2565
PspPPI	RGGWCCY	2 cut(s)	214, 1931
PsrI	GAACNNNNNNTAC	2 cut(s)	486, 518
PstNI	CAGNNNCTG	1 cut(s)	1219
PsuI	RGATCY	7 cut(s)	154, 259, 536, 958, 2313, 2632, 2715
PsyI	GACNNNGTC	1 cut(s)	1326
PvuII	CAGCTG	1 cut(s)	46
RsaI	GTAC	5 cut(s)	98, 753, 1611, 1742, 1784
RsaNI	GTAC	5 cut(s)	97, 752, 1610, 1741, 1783
RseI	CAYNNNNRTG	2 cut(s)	1371, 1586
SacI	GAGCTC	3 cut(s)	1464, 1854, 2787
SacII	CCGCGG	1 cut(s)	195
SapI	GCTCTTC	1 cut(s)	1842
SaqAI	TTAA	6 cut(s)	306, 1881, 2376, 2465, 2753, 2796
Sau96I	GGNCC	5 cut(s)	214, 1402, 1931, 2325, 2565
SchI	GAGTC	6 cut(s)	263, 413, 676, 2263, 2460, 2660
ScrFI	CCNGG	8 cut(s)	63, 264, 1220, 1400, 2183, 2496, 2600, 2820
SduI	GDGCHC	7 cut(s)	1015, 1150, 1464, 1854, 2037, 2613, 2787
SfaNI	GCATC	8 cut(s)	28, 91, 1033, 1372, 1792, 2386, 2403, 2859
SfcI	CTRYAG	2 cut(s)	492, 1731
Sfr303I	CCGCGG	1 cut(s)	195
SgrBI	CCGCGG	1 cut(s)	195
SinI	GGWCC	4 cut(s)	214, 1931, 2325, 2565
SmiMI	CAYNNNNRTG	2 cut(s)	1371, 1586
SmlI	CTYRAG	2 cut(s)	696, 1842
SmoI	CTYRAG	2 cut(s)	696, 1842
SphI	GCATGC	1 cut(s)	557
SsiI	CCGC	4 cut(s)	192, 194, 510, 1818
SspMI	CTAG	4 cut(s)	918, 1340, 2078, 2825
SstI	GAGCTC	3 cut(s)	1464, 1854, 2787
StyD4I	CCNGG	8 cut(s)	61, 262, 1218, 1398, 2181, 2494, 2598, 2818
StyI	CCWWGG	4 cut(s)	591, 1405, 2309, 2484
TaiI	ACGT	6 cut(s)	425, 811, 1141, 1147, 1209, 1636
TaqI	TCGA	6 cut(s)	93, 126, 624, 1230, 1417, 2299
TatI	WGTACW	1 cut(s)	1609
TfiI	GAWTC	6 cut(s)	646, 1355, 1790, 2092, 2291, 2404
Tru1I	TTAA	6 cut(s)	306, 1881, 2376, 2465, 2753, 2796
Tru9I	TTAA	6 cut(s)	306, 1881, 2376, 2465, 2753, 2796
TscAI	CASTG	8 cut(s)	670, 784, 1375, 1471, 1495, 2355, 2441, 2884
TseFI	GTSAC	7 cut(s)	266, 880, 1245, 1262, 2452, 2663, 2720
Tsp45I	GTSAC	7 cut(s)	266, 880, 1245, 1262, 2452, 2663, 2720
TspGWI	ACGGA	3 cut(s)	1976, 2171, 2708
TspRI	CASTG	8 cut(s)	670, 784, 1375, 1471, 1495, 2355, 2441, 2884
Tth111I	GACNNNGTC	1 cut(s)	1326
VpaK11BI	GGWCC	4 cut(s)	214, 1931, 2325, 2565
XagI	CCTNNNNNAGG	1 cut(s)	2597
XapI	RAATTY	3 cut(s)	758, 1074, 1512
XbaI	TCTAGA	1 cut(s)	2824
XceI	RCATGY	2 cut(s)	304, 557
XmnI	GAANNNNTTC	5 cut(s)	168, 330, 810, 2205, 2295
XspI	CTAG	4 cut(s)	918, 1340, 2078, 2825

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.