Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0005600

Physical Location & Seq

Genomic Coordinates Reverse (-)

46228528 .. 46234563

Gene Structure 6036 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019094

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2895 bp

ATGGCAACCATGGCACCGAGGAACTTGGAGAAGATGGCTTCAATTGATGCACAGCTGAGGCTGTTGGCACCAGGCAAGGTGTCTGAGGATGACAAACTGATCGAGTACGATGCTTTGTTGTTGGATCGCTTCCTCGATATTCTTCAGGATTTACATGGGGAGGATCTCAGAGAAACGGTTCAAGATTGTTATGAGCTATCCGCGGAATACGAAGGAAAGCAGGACCCGAAAAAGTTGGAGGAACTTGGAAATGTGTTTACAAGTTTGGATCCTGGTGACTCCATTGTTGTTGCCAAGTCTTTTTCCCACATGCTTAACTTGGCCAATTTGGCTGAAGAAGTTCAGATTGCATATCGGAGAAGGATAAAGTTGAAGAAGGGAGATTTTGTTGATGAAGCAAGTGCTACAACAGAGTCGGACATTGAAGAGACGTTCAAGAAGCTTGTGGGGCAACTGAAGAAGTCCCCACAAGAAGTTTTTGATGAATTGAAGAACCAGACTGTAGATTTGGTTCTAACCGCACATCCTACTCAGTCTGTTCGCAGATCTCTGCTTCAAAAGCATGCAAGGATAAGAAATTGTTTGACGCAGTTGTATGCCAAGGATATTACACCTGATGATAAACAAGAACTCGATGAGGCTCTCCAAAGGGAGATTCAAGCTGCATTTCGCACTGACGAAATCCGAAGGACTCCTCCAACCCCTCAAGATGAGATGAGGGCAGGAATGAGCTACTTTCATGAGACGATTTGGAAAGGTGTACCAAAATTCTTACGCAGAGTTGACACTGCCTTGAAGAACATTGGGATAAATGAACGTGTTCCTTACAATGCCCCTCTCATTCAATTTTCTTCTTGGATGGGTGGGGATCGTGATGGAAATCCCAGGGTCACTCCAGAAGTTACACGGGATGTATGCTTATTGGCTAGAATGATGGCTGCTAACTTGTATTTCTCCCAGATAGAGGATCTTATGTTTGAGTTATCTATGTGGCGTTGCAACGATGAGCTTCTTGCTCGTGCTCATGAACTTCATAGGTCTTCAAGGAAGGATGCAAAACACTATATAGAGTTTTGGAAGCAAATTCCTCCAAATGAGCCATATCGTGTTATTCTTGGTGATGTGAGAGACAAGCTCTACAATACACGTGAACGTGCTCGTCAATTACTATCCAATGGAACCTCTGATATTCCTGAGGACACTACTTTTACTAATGTTGAACAGTTCCTGGAACCTCTCGAAATGTGTTATCGGTCACTCTGTTCCTGTGGTGACAAGACAATTGCTGACGGGAGCCTTCTTGATTTCTTACGGCAAGTTTCTACTTTCGGACTTTGTCTTGTGAGACTAGACATACGGCAAGAATCAGACAGGCACACTGATGTCATTGATGCTATTACAAAGCACCTGGGCCTTGGGTCTTATCGAGAATGGCCTGAGAAACAAAGGCAAGAATGGCTGTTGTCTGAGCTCAGTGGAAAGCGCCCTCTTTTTGGCACTGATGTTCCCAAGACTGAAGAAATTTCTGATGTATTGGAGACATTCAAAGTCATTTCAGAACTTCCTTCAGACAACTTTGGTGCCTATATTATATCAATGGCCACAGCCCCATCTGATGTACTTGCTGTTGAGCTTTTACAACGTGAATGCCGTGTGAAAAAGCCACTACGGGTTGTTCCATTGTTTGAGAAGCTTGCTGATTTAGAGGCTGCTCCTGCGGCTGTGGCTCGCCTCTTCTCAATAGATTGGTACAAAAACCGGATCAATGGGAAGCAAGAAGTCATGATAGGGTACTCAGATTCAGGAAAGGATGCAGGCCGTCTATCTGCAGCATGGCAGCTATACAAGGCTCAAGAAGAGCTCATAAAGGTTGCGAAACAATATGGTGTTAAGCTTACCATGTTTCATGGCCGAGGTGGAACAGTTGGAAGAGGAGGAGGACCCACTCATCTTGCTATATTGTCTCAGCCACCTGAGACAATTCACGGTTCACTCCGTGTAACAGTTCAAGGTGAAGTTATTGAACAATCATTTGGAGAGGAGCACTTGTGTTTTAGAACACTTCAGCGTTTCACAGCAGCCACACTAGAGCATGGTATGAATCCCCCAGTTTCGCCCAAGCCAGAATGGCGTGCACTCATGGATGAGATGGCAGTTGTTGCTACGGAGGAATACCGTTCAATAGTTTTCCAGGAACCCCGTTTTGTTGAATACTTTCGCCTTGCAACACCAGAGATGGAGTATGGTCGGATGAACATTGGGAGTCGTCCATCCAAGCGAAAGCCAAGTGGAGGCATCGAATCACTTCGAGCAATCCCATGGATCTTTGCATGGACCCAGACAAGATTTCACTTACCAGTGTGGCTTGGTTTTGGGGCAGCATTTAAGCAAGCCTTAGAGAAGGATGCAAAGAATCTTCAGATGCTTCGGGAGATGTATAATCAGTGGCCTTTCTTCAGAGTCACCATTGATTTAATTGAGATGGTGTTTGCCAAGGGAGACCCAGGTATTACAGCTCTTTATGACAAGCTTCTGGTGTCTGAAGACCTATGGTCATTTGGAGAGCGACTGAGGACCAACTATGAAGATACTAAACGCCTCCTACTCCAGGTTGCTGGGCACAGAAATCTTCTGGAAGGAGATCCTTACTTGAGGCAGAGACTTCTTCTTCGTGACTCGTATATTACAACACTAAATGTGTGCCAAGCCTATACGCTGAAGCAGATCCGTGACCCTAACTATCACGGTCAAGTAAGGCCATTAAAGGAACCAGCAAGAAAGCCAGCAGCAGAGCTCGTCAATCTTAACCCAACAAGCGAATATGCTCCAGGTCTAGAGGACACACTTATTTTGACCATGAAGGGTATTGCTGCTGGGATGCAGAACACCGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004611 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0007275 GO:0008150 GO:0008152 GO:0008964 GO:0009506 GO:0009507 GO:0009536 GO:0015977 GO:0016020 GO:0016829 GO:0016830 GO:0016831 GO:0030054 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0055044 GO:0071704 GO:0071944 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko00620 ko00680 ko00710 ko00720 ko01100 ko01120 ko01200 map00620 map00680 map00710 map00720 map01100 map01120 map01200

Pfam Domains

Protein Families

PEPcase

Protein Analysis

965

Amino Acids

110.06

Weight (kDa)

5.92

Isoelectric Point (pI)

43.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PEPcase	PF00311	37 - 964	0.0	Phosphoenolpyruvate carboxylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42600 AT2G42600 AT2G42600
fragaria_vesca	FvH4_6g27390 FvH4_6g27390 FvH4_6g27390 FvH4_6g33320
malus_domestica	MD09G1237900.v1.1 MD17G1230800.v1.1
prunus_persica	Prupe.3G118300_v2.0.a1
pyrus_communis	pycom09g15640 pycom17g23400
rosa_chinensis	RchiOBHm_Chr2g0090101 RchiOBHm_Chr2g0129661
rosa_laevigata	RLG00000016085 RLG00000019094
rosa_multiflora	Rmu_sc0008968.1_g000006 Rmu_sc0009263.1_g000005 Rmu_sc0020548.1_g000003
rosa_roxburghii	Rroxscaffold_2G00114470
rosa_rugosa	Rorug02G0005300 Rorug02G0288200
rosa_samantha	Rh2AG339500 Rh2BG348300 Rh2CG326900 Rh2DG366400
rosa_wichuraiana	Rw2G004560 Rw2G027850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	13, 67, 1580
AccII	CGCG	1 cut(s)	203
AciI	CCGC	4 cut(s)	201, 203, 519, 1718
AcoI	YGGCCR	3 cut(s)	321, 1599, 1909
AcsI	RAATTY	3 cut(s)	767, 1083, 1521
AcvI	CACGTG	1 cut(s)	1148
AdeI	CACNNNGTG	1 cut(s)	1997
AfaI	GTAC	5 cut(s)	107, 762, 1620, 1751, 1793
AfiI	CCNNNNNNNGG	4 cut(s)	964, 1493, 2291, 2608
AflIII	ACRYGT	2 cut(s)	817, 1145
AgeI	ACCGGT	1 cut(s)	2888
AhdI	GACNNNNNGTC	1 cut(s)	2551
AjnI	CCWGG	9 cut(s)	70, 271, 884, 1227, 1407, 2190, 2503, 2607, 2827
AjuI	GAANNNNNNNTTGG	4 cut(s)	639, 671, 2016, 2048
Alw21I	GWGCWC	7 cut(s)	1024, 1159, 1473, 1863, 2046, 2137, 2796
Alw26I	GTCTC	9 cut(s)	422, 737, 1122, 1339, 1532, 1968, 1970, 2493, 2653
Alw44I	GTGCAC	1 cut(s)	2133
AlwNI	CAGNNNCTG	1 cut(s)	1228
AoxI	GGCC	8 cut(s)	321, 1411, 1433, 1599, 1816, 1909, 2447, 2756
ApaLI	GTGCAC	1 cut(s)	2133
ApeKI	GCWGC	9 cut(s)	662, 938, 1709, 1829, 1837, 2078, 2378, 2786, 2870
ApoI	RAATTY	3 cut(s)	767, 1083, 1521
ArsI	GACNNNNNNTTYG	4 cut(s)	490, 522, 2652, 2684
AsiGI	ACCGGT	1 cut(s)	2888
Asp700I	GAANNNNTTC	5 cut(s)	177, 339, 819, 2214, 2304
AspLEI	GCGC	1 cut(s)	1485
AspS9I	GGNCC	5 cut(s)	223, 1411, 1940, 2334, 2574
AsuHPI	GGTGA	5 cut(s)	287, 1130, 1283, 2024, 2455
AvaII	GGWCC	4 cut(s)	223, 1940, 2334, 2574
AxyI	CCTNAGG	1 cut(s)	1194
BaeGI	GKGCMC	2 cut(s)	2137, 2622
BalI	TGGCCA	2 cut(s)	323, 1601
BamHI	GGATCC	1 cut(s)	268
BanI	GGYRCC	3 cut(s)	13, 67, 1580
BanII	GRGCYC	3 cut(s)	1473, 1863, 2796
BauI	CACGAG	1 cut(s)	1017
BbrPI	CACGTG	1 cut(s)	1148
BbsI	GAAGAC	2 cut(s)	1032, 2550
Bbv12I	GWGCWC	7 cut(s)	1024, 1159, 1473, 1863, 2046, 2137, 2796
BbvCI	CCTCAGC	1 cut(s)	56
BbvI	GCAGC	9 cut(s)	649, 925, 1696, 1841, 1849, 2090, 2390, 2798, 2857
BccI	CCATC	9 cut(s)	28, 853, 869, 928, 1618, 2143, 2230, 2278, 2476
BceAI	ACGGC	4 cut(s)	1328, 1373, 1635, 1803
BcgI	CGANNNNNNTGC	2 cut(s)	92, 126
BciT130I	CCWGG	9 cut(s)	72, 273, 886, 1229, 1409, 2192, 2505, 2609, 2829
BcoDI	GTCTC	9 cut(s)	422, 737, 1122, 1339, 1532, 1968, 1970, 2493, 2653
BfaI	CTAG	4 cut(s)	927, 1349, 2087, 2834
BfmI	CTRYAG	2 cut(s)	501, 1827
BfoI	RGCGCY	1 cut(s)	1486
BglI	GCCNNNNNGGC	2 cut(s)	329, 2128
BglII	AGATCT	1 cut(s)	545
Bme1390I	CCNGG	9 cut(s)	72, 273, 886, 1229, 1409, 2192, 2505, 2609, 2829
Bme18I	GGWCC	4 cut(s)	223, 1940, 2334, 2574
BmeRI	GACNNNNNGTC	1 cut(s)	2551
BmgT120I	GGNCC	5 cut(s)	223, 1411, 1940, 2334, 2574
BmrFI	CCNGG	9 cut(s)	72, 273, 886, 1229, 1409, 2192, 2505, 2609, 2829
BmrI	ACTGGG	1 cut(s)	2102
BmsI	GCATC	9 cut(s)	37, 100, 1042, 1381, 1801, 2304, 2395, 2412, 2868
BmuI	ACTGGG	1 cut(s)	2102
BpiI	GAAGAC	2 cut(s)	1032, 2550
BplI	GAGNNNNNCTC	2 cut(s)	1119, 1151
BpmI	CTGGAG	3 cut(s)	879, 2591, 2811
Bpu10I	CCTNAGC	1 cut(s)	56
BpuEI	CTTGAG	3 cut(s)	690, 1836, 2671
BsaAI	YACGTR	1 cut(s)	1148
BsaBI	GATNNNNATC	1 cut(s)	879
BsaI	GGTCTC	1 cut(s)	2493
BsaWI	WCCGGW	2 cut(s)	1758, 2888
BsaXI	ACNNNNNCTCC	4 cut(s)	372, 402, 2033, 2063
Bsc4I	CCNNNNNNNGG	4 cut(s)	964, 1493, 2291, 2608
Bse118I	RCCGGY	1 cut(s)	2888
Bse1I	ACTGG	2 cut(s)	2108, 2357
Bse21I	CCTNAGG	1 cut(s)	1194
Bse8I	GATNNNNATC	1 cut(s)	879
BseBI	CCWGG	9 cut(s)	72, 273, 886, 1229, 1409, 2192, 2505, 2609, 2829
BseJI	GATNNNNATC	1 cut(s)	879
BseLI	CCNNNNNNNGG	4 cut(s)	964, 1493, 2291, 2608
BseNI	ACTGG	2 cut(s)	2108, 2357
BseRI	GAGGAG	4 cut(s)	684, 1947, 1950, 2054
BseSI	GKGCMC	2 cut(s)	2137, 2622
BseXI	GCAGC	9 cut(s)	649, 925, 1696, 1841, 1849, 2090, 2390, 2798, 2857
BseYI	CCCAGC	2 cut(s)	2615, 2873
Bsh1236I	CGCG	1 cut(s)	203
BshFI	GGCC	8 cut(s)	323, 1413, 1435, 1601, 1818, 1911, 2449, 2758
BshNI	GGYRCC	3 cut(s)	13, 67, 1580
BshTI	ACCGGT	1 cut(s)	2888
BsiHKAI	GWGCWC	7 cut(s)	1024, 1159, 1473, 1863, 2046, 2137, 2796
BsiSI	CCGG	2 cut(s)	1759, 2889
BslFI	GGGAC	1 cut(s)	448
BslI	CCNNNNNNNGG	4 cut(s)	964, 1493, 2291, 2608
BsmAI	GTCTC	9 cut(s)	422, 737, 1122, 1339, 1532, 1968, 1970, 2493, 2653
BsmBI	CGTCTC	2 cut(s)	422, 737
BsmFI	GGGAC	1 cut(s)	448
BsmI	GAATGC	1 cut(s)	1652
BsnI	GGCC	8 cut(s)	323, 1413, 1435, 1601, 1818, 1911, 2449, 2758
Bso31I	GGTCTC	1 cut(s)	2493
Bsp1286I	GDGCHC	8 cut(s)	1024, 1159, 1473, 1863, 2046, 2137, 2622, 2796
Bsp19I	CCATGG	2 cut(s)	9, 2318
BspACI	CCGC	4 cut(s)	201, 203, 519, 1718
BspANI	GGCC	8 cut(s)	323, 1413, 1435, 1601, 1818, 1911, 2449, 2758
BspFNI	CGCG	1 cut(s)	203
BspHI	TCATGA	3 cut(s)	739, 1024, 1782
BspMAI	CTGCAG	1 cut(s)	1831
BspQI	GCTCTTC	1 cut(s)	1851
BspT107I	GGYRCC	3 cut(s)	13, 67, 1580
BspTNI	GGTCTC	1 cut(s)	2493
BsrFI	RCCGGY	1 cut(s)	2888
BsrI	ACTGG	2 cut(s)	2108, 2357
BssAI	RCCGGY	1 cut(s)	2888
BssSI	CACGAG	1 cut(s)	1017
BssT1I	CCWWGG	5 cut(s)	9, 600, 1414, 2318, 2493
Bst2BI	CACGAG	1 cut(s)	1017
Bst2UI	CCWGG	9 cut(s)	72, 273, 886, 1229, 1409, 2192, 2505, 2609, 2829
Bst4CI	ACNGT	8 cut(s)	178, 502, 1224, 1924, 1988, 2005, 2177, 2747
Bst6I	CTCTTC	4 cut(s)	420, 1739, 1851, 1924
BstAPI	GCANNNNNTGC	1 cut(s)	2159
BstBAI	YACGTR	1 cut(s)	1148
BstC8I	GCNNGC	7 cut(s)	564, 1695, 1729, 1816, 2133, 2391, 2784
BstDSI	CCRYGG	3 cut(s)	9, 201, 2318
BstENI	CCTNNNNNAGG	1 cut(s)	2606
BstFNI	CGCG	1 cut(s)	203
BstH2I	RGCGCY	1 cut(s)	1486
BstHHI	GCGC	1 cut(s)	1485
BstMAI	GTCTC	9 cut(s)	422, 737, 1122, 1339, 1532, 1968, 1970, 2493, 2653
BstNI	CCWGG	9 cut(s)	72, 273, 886, 1229, 1409, 2192, 2505, 2609, 2829
BstNSI	RCATGY	2 cut(s)	313, 566
BstSCI	CCNGG	9 cut(s)	70, 271, 884, 1227, 1407, 2190, 2503, 2607, 2827
BstSFI	CTRYAG	2 cut(s)	501, 1827
BstSLI	GKGCMC	2 cut(s)	2137, 2622
BstUI	CGCG	1 cut(s)	203
BstV1I	GCAGC	9 cut(s)	649, 925, 1696, 1841, 1849, 2090, 2390, 2798, 2857
BstV2I	GAAGAC	2 cut(s)	1032, 2550
BstX2I	RGATCY	7 cut(s)	163, 268, 545, 967, 2322, 2641, 2724
BstXI	CCANNNNNNTGG	1 cut(s)	2615
BstYI	RGATCY	7 cut(s)	163, 268, 545, 967, 2322, 2641, 2724
Bsu36I	CCTNAGG	1 cut(s)	1194
BsuRI	GGCC	8 cut(s)	323, 1413, 1435, 1601, 1818, 1911, 2449, 2758
BtgI	CCRYGG	3 cut(s)	9, 201, 2318
BtsI	GCAGTG	1 cut(s)	786
BtsIMutI	CAGTG	7 cut(s)	672, 786, 1377, 1480, 1497, 2364, 2450
Cac8I	GCNNGC	7 cut(s)	564, 1695, 1729, 1816, 2133, 2391, 2784
CaiI	CAGNNNCTG	1 cut(s)	1228
CciI	TCATGA	3 cut(s)	739, 1024, 1782
CfoI	GCGC	1 cut(s)	1485
Cfr10I	RCCGGY	1 cut(s)	2888
Cfr13I	GGNCC	5 cut(s)	223, 1411, 1940, 2334, 2574
Cfr42I	CCGCGG	1 cut(s)	204
CseI	GACGC	1 cut(s)	595
Csp6I	GTAC	5 cut(s)	106, 761, 1619, 1750, 1792
CspAI	ACCGGT	1 cut(s)	2888
CspCI	CAANNNNNGTGG	2 cut(s)	1933, 1968
CviQI	GTAC	5 cut(s)	106, 761, 1619, 1750, 1792
DraIII	CACNNNGTG	1 cut(s)	1997
DriI	GACNNNNNGTC	1 cut(s)	2551
EaeI	YGGCCR	3 cut(s)	321, 1599, 1909
Eam1104I	CTCTTC	4 cut(s)	420, 1739, 1851, 1924
Eam1105I	GACNNNNNGTC	1 cut(s)	2551
EarI	CTCTTC	4 cut(s)	420, 1739, 1851, 1924
Ecl136II	GAGCTC	3 cut(s)	1471, 1861, 2794
Eco130I	CCWWGG	5 cut(s)	9, 600, 1414, 2318, 2493
Eco24I	GRGCYC	3 cut(s)	1473, 1863, 2796
Eco31I	GGTCTC	1 cut(s)	2493
Eco47I	GGWCC	4 cut(s)	223, 1940, 2334, 2574
Eco53kI	GAGCTC	3 cut(s)	1471, 1861, 2794
Eco72I	CACGTG	1 cut(s)	1148
Eco81I	CCTNAGG	1 cut(s)	1194
EcoICRI	GAGCTC	3 cut(s)	1471, 1861, 2794
EcoNI	CCTNNNNNAGG	1 cut(s)	2606
EcoO109I	RGGNCCY	2 cut(s)	223, 1940
EcoRII	CCWGG	9 cut(s)	70, 271, 884, 1227, 1407, 2190, 2503, 2607, 2827
EcoT14I	CCWWGG	5 cut(s)	9, 600, 1414, 2318, 2493
EcoT38I	GRGCYC	3 cut(s)	1473, 1863, 2796
ErhI	CCWWGG	5 cut(s)	9, 600, 1414, 2318, 2493
Esp3I	CGTCTC	2 cut(s)	422, 737
FalI	AAGNNNNNCTT	2 cut(s)	2378, 2410
FaqI	GGGAC	1 cut(s)	448
FriOI	GRGCYC	3 cut(s)	1473, 1863, 2796
FspBI	CTAG	4 cut(s)	927, 1349, 2087, 2834
GlaI	GCGC	1 cut(s)	1484
GsaI	CCCAGC	2 cut(s)	2619, 2877
GsuI	CTGGAG	3 cut(s)	879, 2591, 2811
HaeII	RGCGCY	1 cut(s)	1486
HaeIII	GGCC	8 cut(s)	323, 1413, 1435, 1601, 1818, 1911, 2449, 2758
HapII	CCGG	2 cut(s)	1759, 2889
HgaI	GACGC	1 cut(s)	595
HhaI	GCGC	1 cut(s)	1485
Hin6I	GCGC	1 cut(s)	1483
HinP1I	GCGC	1 cut(s)	1483
HincII	GTYRAC	1 cut(s)	784
HindII	GTYRAC	1 cut(s)	784
HindIII	AAGCTT	4 cut(s)	440, 1691, 1892, 2528
HpaII	CCGG	2 cut(s)	1759, 2889
HphI	GGTGA	5 cut(s)	287, 1130, 1283, 2024, 2455
Hpy166II	GTNNAC	6 cut(s)	258, 761, 784, 1151, 1991, 2135
Hpy8I	GTNNAC	6 cut(s)	258, 761, 784, 1151, 1991, 2135
HpyCH4III	ACNGT	8 cut(s)	178, 502, 1224, 1924, 1988, 2005, 2177, 2747
HpyCH4IV	ACGT	5 cut(s)	431, 817, 1147, 1153, 1642
HpySE526I	ACGT	5 cut(s)	431, 817, 1147, 1153, 1642
HspAI	GCGC	1 cut(s)	1483
KspI	CCGCGG	1 cut(s)	204
LguI	GCTCTTC	1 cut(s)	1851
LmnI	GCTCC	4 cut(s)	1293, 1717, 2041, 2830
Lsp1109I	GCAGC	9 cut(s)	649, 925, 1696, 1841, 1849, 2090, 2390, 2798, 2857
LweI	GCATC	9 cut(s)	37, 100, 1042, 1381, 1801, 2304, 2395, 2412, 2868
MaeI	CTAG	4 cut(s)	927, 1349, 2087, 2834
MaeII	ACGT	5 cut(s)	431, 817, 1147, 1153, 1642
MaeIII	GTNAC	9 cut(s)	275, 889, 901, 1254, 1271, 1999, 2461, 2672, 2729
MfeI	CAATTG	2 cut(s)	42, 1281
MflI	RGATCY	7 cut(s)	163, 268, 545, 967, 2322, 2641, 2724
MhlI	GDGCHC	8 cut(s)	1024, 1159, 1473, 1863, 2046, 2137, 2622, 2796
MlsI	TGGCCA	2 cut(s)	323, 1601
MluNI	TGGCCA	2 cut(s)	323, 1601
MlyI	GAGTC	6 cut(s)	272, 422, 685, 2272, 2469, 2669
MmeI	TCCRAC	6 cut(s)	102, 216, 396, 722, 1906, 2228
Mox20I	TGGCCA	2 cut(s)	323, 1601
MroXI	GAANNNNTTC	5 cut(s)	177, 339, 819, 2214, 2304
MscI	TGGCCA	2 cut(s)	323, 1601
MseI	TTAA	6 cut(s)	315, 1890, 2385, 2474, 2762, 2805
MslI	CAYNNNNRTG	1 cut(s)	1380
Msp20I	TGGCCA	2 cut(s)	323, 1601
MspA1I	CMGCKG	2 cut(s)	55, 203
MspI	CCGG	2 cut(s)	1759, 2889
MspR9I	CCNGG	9 cut(s)	72, 273, 886, 1229, 1409, 2192, 2505, 2609, 2829
MunI	CAATTG	2 cut(s)	42, 1281
Mva1269I	GAATGC	1 cut(s)	1652
MvaI	CCWGG	9 cut(s)	72, 273, 886, 1229, 1409, 2192, 2505, 2609, 2829
MvnI	CGCG	1 cut(s)	203
NcoI	CCATGG	2 cut(s)	9, 2318
NmeAIII	GCCGAG	1 cut(s)	1937
NmuCI	GTSAC	7 cut(s)	275, 889, 1254, 1271, 2461, 2672, 2729
NspI	RCATGY	2 cut(s)	313, 566
PaeI	GCATGC	1 cut(s)	566
PagI	TCATGA	3 cut(s)	739, 1024, 1782
PasI	CCCWGGG	1 cut(s)	885
PciSI	GCTCTTC	1 cut(s)	1851
PcsI	WCGNNNNNNNCGW	1 cut(s)	1648
PctI	GAATGC	1 cut(s)	1652
PdmI	GAANNNNTTC	5 cut(s)	177, 339, 819, 2214, 2304
PfeI	GAWTC	6 cut(s)	655, 1364, 1799, 2101, 2300, 2413
PflFI	GACNNNGTC	1 cut(s)	1335
PfoI	TCCNGGA	2 cut(s)	1227, 2190
PinAI	ACCGGT	1 cut(s)	2888
PleI	GAGTC	6 cut(s)	272, 421, 685, 2271, 2468, 2669
PmaCI	CACGTG	1 cut(s)	1148
PmlI	CACGTG	1 cut(s)	1148
PpsI	GAGTC	6 cut(s)	272, 421, 685, 2271, 2468, 2669
Ppu21I	YACGTR	1 cut(s)	1148
PpuMI	RGGWCCY	2 cut(s)	223, 1940
Psp124BI	GAGCTC	3 cut(s)	1473, 1863, 2796
Psp5II	RGGWCCY	2 cut(s)	223, 1940
Psp6I	CCWGG	9 cut(s)	70, 271, 884, 1227, 1407, 2190, 2503, 2607, 2827
PspCI	CACGTG	1 cut(s)	1148
PspFI	CCCAGC	2 cut(s)	2615, 2873
PspGI	CCWGG	9 cut(s)	70, 271, 884, 1227, 1407, 2190, 2503, 2607, 2827
PspPI	GGNCC	5 cut(s)	223, 1411, 1940, 2334, 2574
PspPPI	RGGWCCY	2 cut(s)	223, 1940
PsrI	GAACNNNNNNTAC	2 cut(s)	495, 527
PstI	CTGCAG	1 cut(s)	1831
PstNI	CAGNNNCTG	1 cut(s)	1228
PsuI	RGATCY	7 cut(s)	163, 268, 545, 967, 2322, 2641, 2724
PsyI	GACNNNGTC	1 cut(s)	1335
PvuII	CAGCTG	1 cut(s)	55
RsaI	GTAC	5 cut(s)	107, 762, 1620, 1751, 1793
RsaNI	GTAC	5 cut(s)	106, 761, 1619, 1750, 1792
RseI	CAYNNNNRTG	1 cut(s)	1380
SacI	GAGCTC	3 cut(s)	1473, 1863, 2796
SacII	CCGCGG	1 cut(s)	204
SapI	GCTCTTC	1 cut(s)	1851
SaqAI	TTAA	6 cut(s)	315, 1890, 2385, 2474, 2762, 2805
Sau96I	GGNCC	5 cut(s)	223, 1411, 1940, 2334, 2574
SchI	GAGTC	6 cut(s)	272, 422, 685, 2272, 2469, 2669
ScrFI	CCNGG	9 cut(s)	72, 273, 886, 1229, 1409, 2192, 2505, 2609, 2829
SduI	GDGCHC	8 cut(s)	1024, 1159, 1473, 1863, 2046, 2137, 2622, 2796
SfaNI	GCATC	9 cut(s)	37, 100, 1042, 1381, 1801, 2304, 2395, 2412, 2868
SfcI	CTRYAG	2 cut(s)	501, 1827
Sfr303I	CCGCGG	1 cut(s)	204
SgrBI	CCGCGG	1 cut(s)	204
SinI	GGWCC	4 cut(s)	223, 1940, 2334, 2574
SmiMI	CAYNNNNRTG	1 cut(s)	1380
SmlI	CTYRAG	3 cut(s)	705, 1851, 2650
SmoI	CTYRAG	3 cut(s)	705, 1851, 2650
SphI	GCATGC	1 cut(s)	566
SsiI	CCGC	4 cut(s)	201, 203, 519, 1718
SspMI	CTAG	4 cut(s)	927, 1349, 2087, 2834
SstI	GAGCTC	3 cut(s)	1473, 1863, 2796
StyD4I	CCNGG	9 cut(s)	70, 271, 884, 1227, 1407, 2190, 2503, 2607, 2827
StyI	CCWWGG	5 cut(s)	9, 600, 1414, 2318, 2493
TaaI	ACNGT	8 cut(s)	178, 502, 1224, 1924, 1988, 2005, 2177, 2747
TaiI	ACGT	5 cut(s)	434, 820, 1150, 1156, 1645
TaqI	TCGA	7 cut(s)	102, 135, 633, 1239, 1426, 2298, 2308
TaqII	GACCGA	1 cut(s)	1242
TatI	WGTACW	1 cut(s)	1618
TauI	GCSGC	1 cut(s)	1721
TfiI	GAWTC	6 cut(s)	655, 1364, 1799, 2101, 2300, 2413
Tru1I	TTAA	6 cut(s)	315, 1890, 2385, 2474, 2762, 2805
Tru9I	TTAA	6 cut(s)	315, 1890, 2385, 2474, 2762, 2805
TscAI	CASTG	7 cut(s)	679, 793, 1384, 1480, 1504, 2364, 2450
TseFI	GTSAC	7 cut(s)	275, 889, 1254, 1271, 2461, 2672, 2729
TseI	GCWGC	9 cut(s)	662, 938, 1709, 1829, 1837, 2078, 2378, 2786, 2870
Tsp45I	GTSAC	7 cut(s)	275, 889, 1254, 1271, 2461, 2672, 2729
TspGWI	ACGGA	3 cut(s)	1985, 2180, 2717
TspRI	CASTG	7 cut(s)	679, 793, 1384, 1480, 1504, 2364, 2450
Tth111I	GACNNNGTC	1 cut(s)	1335
VneI	GTGCAC	1 cut(s)	2133
VpaK11BI	GGWCC	4 cut(s)	223, 1940, 2334, 2574
XagI	CCTNNNNNAGG	1 cut(s)	2606
XapI	RAATTY	3 cut(s)	767, 1083, 1521
XbaI	TCTAGA	1 cut(s)	2833
XceI	RCATGY	2 cut(s)	313, 566
XmnI	GAANNNNTTC	5 cut(s)	177, 339, 819, 2214, 2304
XspI	CTAG	4 cut(s)	927, 1349, 2087, 2834

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.