Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0005600

Physical Location & Seq

Genomic Coordinates Forward (+)

534369 .. 545936

Gene Structure 11568 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0005300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3033 bp

ATGGATTTTCTTTCTGCAATTGGTAGTGCCATTGTTGAACCAATTGTCAGGTATACGGTTCAACCTGTTGCACGTCAAGTGGGTTATGTTAATCACTTCAAAAGAAACCTTCAAAAACTGGAGGCTCGAGTGGAAGAATTGAGAGCTGCTAGAGAGGGGAAAAACATTGAGGTTGCTGAAACTCAAAGAAAAGGTGAAGGAATCCACCCAGATGTCCAGTTGTGGCTGAAAAAAGTGGAGGAGATCACTGCAAAGACTGACCAATTCCTGAAAGATGAATGCAGCCAAGAAAATCTGAAATGCCTGCATGGGTTTTGCCCTAATCTGACCATGCGTCATCGGCTGAGCAGGAATTCTACAAAGCTGTTGCAGGAGGTTGTTGAACTACATGAAAGAAGAAGGCAACTTCCCAAAGTTTCATGCGGTGTCCTCCGCGAAGAGGCGTGCATCATATCTACTGGAGATTACCAGGCCTTTCAATCAAGGAGGTCAACTTTCAAGGAAATCATGGATGAATTACTGAAGAACCCTAATACCATCAGGATCGGGGTGTACGGAATTGGAGGCGTGGGTAAAAGCACACTTGTCAAAGAAGTGTATAGGCAAGCTAAACAAGATCAGACCAAGTTATTTGATGATGTGGTTTTAGTCCTCGATGTGAAAAAGAATTCAGACCCGGAAGATCTTCAGAAGAAAATTGTTGAAAAATTGGACATGAAGATTAGTCAAAGTGATGATGAGACTATAGACGGAAGGGCGAAGCGTCTATGTGGCAGGATAAAGAACAAAAATGTTCTTGTAATTCTGGACGATGTTTGGGAACCAATTGACTTGGAGTCTGTTGGACTTCCTAGTGTAGCTACTTGTAAGATACTGCTGACATCTAGAAGTAGAAAAGCATTATCTGATATGGGTACGCATAAAGATTTCCAGCTTCACATTTTAGGAGAAGAAGAGACTTGGGCTTTATTTGAGAACAAGGCAGGCGATGTTGTTAAGGATCCCGCTATACAAACAGTAGCAAAACAAGTTGCCCAAAACTGCGGAGGTCTGCCTGTTTTGGTTGTCACAGTGGCAAGCGCTTTAAAGAATAGAACCACTCTACCTCCATGGAAGGACGCTTTGACATGCCTGCAAGAAGGGTCTGACAGAGATGACGAATTGACAGAAAAGGCATACTTGGGTCTAGAGTGGAGTTACAATCAGTTGACTGATAAGCAACTTAAGCCATTGTTCTTGTTATGTGGATATGCTGTGCAGTGGAATGATATTGTTTTGGACGACTTGTTGTACTATAGCGTGGGTTTGGGTTTTTTTGAAAAGCCCTACACAGTGGAGAAAGCACAAAATGCATTGTATTCGTGGGTTGAAAAACTCAAGGACTTTTGTCTGTTGGTAGAGAGCGATGATGATAGATATGTCACAATGCATGACCTTGTACGCAATGCTGCTAACCGGATTGCATCCAGAGATCCACAGATCTTAGCATTAGTGAAAGATGAAGATGAGGGTGGTTTGAAAGAATGGCCAGATAGAAGTTTCTTAGAGAAGTGCACAACCATCTCTTTGCCTTGTAACGGCAATTTTCCAAGCCTTCCGCAAGTTATGCAATGCCCAGCTCTAAGAATGTTTCTGTTGGAGGGTAATTCTAAACCGCTGGCAATAGCCCCTACGTTATTTAAAGAGATGAAACAACTCAATGTTTTGAGTTGGATAAACATGGGCATAGGGTCTCTTCCTCAATCTCTTGGGCTCCTAGAGAATCTTCGGACACTTTGTTTACTATATTGCACATTGGACGAGATATCTATTGTTGGGCAGCTAAGAAACTTAGAAATTCTAAGCTTTGAAGGTTCTGATTTTGTACATCTGCCCCAAGAAATAGGGCAACTGGCTCATCTACGGTTGTTGGATCTATCCGGCTGCTGTAGACTTGAAGTGATATCACCTGGTGTTATATCAAGCTTGACAAGCCTGGAATGCTTGACAATGAAAAAAAGCTTTGACAATTGGGTGATTGAAGGTGAAAGAAACAATGCTAGCCTTTCAGAGCTGGAGCATTTGTCTCATTTAACTGCATTAGTAATACATGTTCCCGATGCAAATCTTCTTCCAGCTAACTTTTTCTCCCTTAAGCTAGAAAGATTCCAAATCATGATTGGTAAAACATGGGCGTGGGACGAGGACGAGGACGAGGAGGGTGAGGGTGAGGGTGAGGGTGAGGATAATGAGGATGATGATGATGAGGAGGAGGAGGAGGAGGAGGATAAGTACCCATTCCTCAACAGACTAAAACTCCAGCTCACTACAAGCATTGAGTTGAATCAAGGTCTAAGAAAGTTGCTGAGGTTATGTGATGATTTGTCCTTGTATGGGACGGACAGTGTTAATCATATTGTCCACCAATTTGATAATGAAGATTTTCAGCAACTGAAACATCTCTGTCTCCGAAACAATGTCGACTTTATTATTACCAAGAAGGTTATGTTGCGGAACTTAAAGACTTTGGTGGTACATGAATGTGATAATATAAGATTCTTGTTCACCTTTTCTGTGGCTAAGAGCCTTGTACAACTCAAATGTTTAGAGATTTCTTCATGTAAACTGTTGAAAGAGATTGTATTATCGACAACAGAATGTGGTCGTGAAGAAAGTATGGGTAACATGTTTCCCAATCTAGAAGTTTTGAATCTTAAGGGACTCGAAAAGCTGGCTAGATTTTGCACGGGAAGTTATGTTGAATTTCCGTCCTTGAAAGAATTGGAAGTAGATGATTGTCCTGAACTACGGGCTTTCATTTGGGAGAATGTTGAGACGAGTACGAGCAGTACTCAAGGTATTATAATCGACCAAGAAACTGATGAGAGAGACTCGAAACAGGAAAAGAACCTTGATGTTAACAGGGAGACACTTGTACAATCCATCCTGTTTGACGAAAAGGTAGGATTTCCTCGCTTGGAGAGTTTGGTAATCAATGGGGTCCTGGACTTGAAGACAATATGGCACTGCCAACAGGCTCAAGACTCTTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004611 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0007275 GO:0008150 GO:0008152 GO:0008964 GO:0009506 GO:0009507 GO:0009536 GO:0015977 GO:0016020 GO:0016829 GO:0016830 GO:0016831 GO:0030054 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0055044 GO:0071704 GO:0071944 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko00620 ko00680 ko00710 ko00720 ko01100 ko01120 ko01200 map00620 map00680 map00710 map00720 map01100 map01120 map01200

Pfam Domains

Protein Families

PEPcase

Protein Analysis

1010

Amino Acids

114.82

Weight (kDa)

4.98

Isoelectric Point (pI)

42.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NB-ARC	PF00931	165 - 329	1.3e-30	NB-ARC domain
LRR_14	PF23598	529 - 718	2e-11	Leucine-rich repeat region
LRR_RPS2	PF23247	827 - 932	2.9e-13	Plant disease resistance protein RPS2-like, leucine-rich repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42600 AT2G42600 AT2G42600
fragaria_vesca	FvH4_6g27390 FvH4_6g27390 FvH4_6g27390 FvH4_6g33320
malus_domestica	MD09G1237900.v1.1 MD17G1230800.v1.1
prunus_persica	Prupe.3G118300_v2.0.a1
pyrus_communis	pycom09g15640 pycom17g23400
rosa_chinensis	RchiOBHm_Chr2g0090101 RchiOBHm_Chr2g0129661
rosa_laevigata	RLG00000016085 RLG00000019094
rosa_multiflora	Rmu_sc0008968.1_g000006 Rmu_sc0009263.1_g000005 Rmu_sc0020548.1_g000003
rosa_roxburghii	Rroxscaffold_2G00114470
rosa_rugosa	Rorug02G0005300 Rorug02G0288200
rosa_samantha	Rh2AG339500 Rh2BG348300 Rh2CG326900 Rh2DG366400
rosa_wichuraiana	Rw2G004560 Rw2G027850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2843
AccI	GTMKAC	3 cut(s)	53, 1930, 2460
AccII	CGCG	1 cut(s)	435
AciI	CCGC	7 cut(s)	423, 433, 1005, 1044, 1598, 1655, 2491
AclWI	GGATC	5 cut(s)	551, 995, 1008, 1466, 1920
AcoI	YGGCCR	1 cut(s)	1526
AcsI	RAATTY	4 cut(s)	352, 667, 1836, 2741
AcuI	CTGAAG	2 cut(s)	542, 671
AdeI	CACNNNGTG	1 cut(s)	1952
AfeI	AGCGCT	1 cut(s)	1081
AfiI	CCNNNNNNNGG	3 cut(s)	439, 1577, 2373
AflII	CTTAAG	3 cut(s)	1223, 2132, 2693
AflIII	ACRYGT	2 cut(s)	2089, 2664
AhdI	GACNNNNNGTC	2 cut(s)	333, 835
AjiI	CACGTC	1 cut(s)	74
AjnI	CCWGG	4 cut(s)	468, 1948, 1974, 2982
Alw21I	GWGCWC	1 cut(s)	1556
Alw26I	GTCTC	8 cut(s)	734, 950, 1737, 2070, 2450, 2807, 2862, 2900
Alw44I	GTGCAC	1 cut(s)	1552
AlwI	GGATC	5 cut(s)	551, 995, 1008, 1466, 1920
AlwNI	CAGNNNCTG	1 cut(s)	2431
Ama87I	CYCGRG	1 cut(s)	126
Aor51HI	AGCGCT	1 cut(s)	1081
AoxI	GGCC	2 cut(s)	471, 1526
ApaLI	GTGCAC	1 cut(s)	1552
ApeKI	GCWGC	5 cut(s)	146, 282, 1448, 1819, 1923
ApoI	RAATTY	4 cut(s)	352, 667, 1836, 2741
Asp700I	GAANNNNTTC	2 cut(s)	684, 2421
AspLEI	GCGC	1 cut(s)	1082
AspS9I	GGNCC	1 cut(s)	2980
AsuC2I	CCSGG	1 cut(s)	677
AsuHPI	GGTGA	9 cut(s)	206, 1938, 2026, 2036, 2213, 2219, 2225, 2231, 2536
AsuNHI	GCTAGC	1 cut(s)	2039
AvaI	CYCGRG	1 cut(s)	126
AvaII	GGWCC	1 cut(s)	2980
BaeGI	GKGCMC	1 cut(s)	1556
BalI	TGGCCA	1 cut(s)	1528
BamHI	GGATCC	1 cut(s)	1000
BanII	GRGCYC	1 cut(s)	1755
BbsI	GAAGAC	1 cut(s)	2999
Bbv12I	GWGCWC	1 cut(s)	1556
BbvCI	CCTCAGC	1 cut(s)	2345
BbvI	GCAGC	5 cut(s)	133, 294, 1435, 1831, 1910
BccI	CCATC	3 cut(s)	545, 1568, 2930
BceAI	ACGGC	1 cut(s)	1594
BcgI	CGANNNNNNTGC	2 cut(s)	1341, 1375
BciT130I	CCWGG	4 cut(s)	470, 1950, 1976, 2984
BcnI	CCSGG	1 cut(s)	677
BcoDI	GTCTC	8 cut(s)	734, 950, 1737, 2070, 2450, 2807, 2862, 2900
BfaI	CTAG	9 cut(s)	150, 852, 885, 1187, 1757, 2040, 2138, 2678, 2715
BfmI	CTRYAG	3 cut(s)	744, 1294, 1927
BfoI	RGCGCY	1 cut(s)	1083
BfrI	CTTAAG	3 cut(s)	1223, 2132, 2693
BglII	AGATCT	2 cut(s)	682, 1479
BisI	GCNGC	5 cut(s)	147, 283, 1449, 1820, 1924
BlpI	GCTNAGC	1 cut(s)	344
BlsI	GCNGC	5 cut(s)	148, 284, 1450, 1821, 1925
BmcAI	AGTACT	1 cut(s)	2830
Bme1390I	CCNGG	5 cut(s)	470, 677, 1950, 1976, 2984
Bme18I	GGWCC	1 cut(s)	2980
BmeRI	GACNNNNNGTC	2 cut(s)	333, 835
BmeT110I	CYCGRG	1 cut(s)	126
BmgBI	CACGTC	1 cut(s)	74
BmgT120I	GGNCC	1 cut(s)	2980
BmiI	GGNNCC	4 cut(s)	822, 1002, 1754, 2981
BmrFI	CCNGG	5 cut(s)	470, 677, 1950, 1976, 2984
BmsI	GCATC	3 cut(s)	456, 1472, 2089
BmtI	GCTAGC	1 cut(s)	2043
BoxI	GACNNNNGTC	1 cut(s)	1386
BpiI	GAAGAC	1 cut(s)	2999
BplI	GAGNNNNNCTC	4 cut(s)	2815, 2847, 2855, 2887
BpmI	CTGGAG	4 cut(s)	140, 480, 2075, 2282
Bpu10I	CCTNAGC	1 cut(s)	2345
Bpu1102I	GCTNAGC	1 cut(s)	344
BpuEI	CTTGAG	3 cut(s)	1361, 2817, 3003
BpuMI	CCSGG	1 cut(s)	677
BsaBI	GATNNNNATC	1 cut(s)	2103
BsaI	GGTCTC	1 cut(s)	1737
BsaJI	CCNNGG	1 cut(s)	1109
BsaWI	WCCGGW	1 cut(s)	1455
Bsc4I	CCNNNNNNNGG	3 cut(s)	439, 1577, 2373
Bse1I	ACTGG	4 cut(s)	123, 217, 463, 1896
Bse3DI	GCAATG	2 cut(s)	1450, 1616
Bse8I	GATNNNNATC	1 cut(s)	2103
BseBI	CCWGG	4 cut(s)	470, 1950, 1976, 2984
BseDI	CCNNGG	1 cut(s)	1109
BseGI	GGATG	4 cut(s)	517, 1463, 2239, 2922
BseJI	GATNNNNATC	1 cut(s)	2103
BseLI	CCNNNNNNNGG	3 cut(s)	439, 1577, 2373
BseMI	GCAATG	2 cut(s)	1450, 1616
BseMII	CTCAG	2 cut(s)	335, 2336
BseNI	ACTGG	4 cut(s)	123, 217, 463, 1896
BseRI	GAGGAG	8 cut(s)	254, 2210, 2261, 2264, 2267, 2270, 2273, 2276
BseSI	GKGCMC	1 cut(s)	1556
BseXI	GCAGC	5 cut(s)	133, 294, 1435, 1831, 1910
BseYI	CCCAGC	1 cut(s)	1615
BsgI	GTGCAG	1 cut(s)	1277
Bsh1236I	CGCG	1 cut(s)	435
BshFI	GGCC	2 cut(s)	473, 1528
BsiHKAI	GWGCWC	1 cut(s)	1556
BsiHKCI	CYCGRG	1 cut(s)	126
BsiSI	CCGG	3 cut(s)	677, 1456, 1920
BslFI	GGGAC	3 cut(s)	2192, 2389, 2712
BslI	CCNNNNNNNGG	3 cut(s)	439, 1577, 2373
BsmAI	GTCTC	8 cut(s)	734, 950, 1737, 2070, 2450, 2807, 2862, 2900
BsmBI	CGTCTC	1 cut(s)	2807
BsmFI	GGGAC	3 cut(s)	2192, 2389, 2712
BsmI	GAATGC	2 cut(s)	284, 1985
BsnI	GGCC	2 cut(s)	473, 1528
Bso31I	GGTCTC	1 cut(s)	1737
BsoBI	CYCGRG	1 cut(s)	126
Bsp1286I	GDGCHC	2 cut(s)	1556, 1755
Bsp1407I	TGTACA	3 cut(s)	1864, 2569, 2914
Bsp143I	GATC	8 cut(s)	243, 543, 616, 682, 1000, 1471, 1479, 1912
Bsp1720I	GCTNAGC	1 cut(s)	344
Bsp19I	CCATGG	1 cut(s)	1109
BspACI	CCGC	7 cut(s)	423, 433, 1005, 1044, 1598, 1655, 2491
BspANI	GGCC	2 cut(s)	473, 1528
BspCNI	CTCAG	2 cut(s)	336, 2337
BspFNI	CGCG	1 cut(s)	435
BspHI	TCATGA	1 cut(s)	2154
BspLI	GGNNCC	4 cut(s)	822, 1002, 1754, 2981
BspOI	GCTAGC	1 cut(s)	2043
BspPI	GGATC	5 cut(s)	551, 995, 1008, 1466, 1920
BspTI	CTTAAG	3 cut(s)	1223, 2132, 2693
BspTNI	GGTCTC	1 cut(s)	1737
BsrDI	GCAATG	2 cut(s)	1450, 1616
BsrGI	TGTACA	3 cut(s)	1864, 2569, 2914
BsrI	ACTGG	4 cut(s)	123, 217, 463, 1896
BssECI	CCNNGG	1 cut(s)	1109
BssMI	GATC	8 cut(s)	243, 543, 616, 682, 1000, 1471, 1479, 1912
BssNAI	GTATAC	1 cut(s)	54
BssT1I	CCWWGG	1 cut(s)	1109
Bst1107I	GTATAC	1 cut(s)	54
Bst2UI	CCWGG	4 cut(s)	470, 1950, 1976, 2984
Bst4CI	ACNGT	7 cut(s)	58, 1018, 1072, 1333, 1905, 2384, 2607
Bst6I	CTCTTC	3 cut(s)	432, 948, 1740
BstAFI	CTTAAG	3 cut(s)	1223, 2132, 2693
BstAPI	GCANNNNNTGC	2 cut(s)	1349, 1606
BstAUI	TGTACA	3 cut(s)	1864, 2569, 2914
BstC8I	GCNNGC	9 cut(s)	305, 445, 606, 985, 1078, 1133, 1659, 2041, 2712
BstDSI	CCRYGG	1 cut(s)	1109
BstF5I	GGATG	4 cut(s)	517, 1463, 2239, 2922
BstFNI	CGCG	1 cut(s)	435
BstH2I	RGCGCY	1 cut(s)	1083
BstHHI	GCGC	1 cut(s)	1082
BstKTI	GATC	8 cut(s)	246, 546, 619, 685, 1003, 1474, 1482, 1915
BstMAI	GTCTC	8 cut(s)	734, 950, 1737, 2070, 2450, 2807, 2862, 2900
BstMBI	GATC	8 cut(s)	243, 543, 616, 682, 1000, 1471, 1479, 1912
BstMWI	GCNNNNNNNGC	6 cut(s)	340, 1225, 1349, 1606, 1971, 1980
BstNI	CCWGG	4 cut(s)	470, 1950, 1976, 2984
BstNSI	RCATGY	3 cut(s)	1131, 2093, 2668
BstPAI	GACNNNNGTC	1 cut(s)	1386
BstSCI	CCNGG	5 cut(s)	468, 675, 1948, 1974, 2982
BstSFI	CTRYAG	3 cut(s)	744, 1294, 1927
BstSLI	GKGCMC	1 cut(s)	1556
BstUI	CGCG	1 cut(s)	435
BstV1I	GCAGC	5 cut(s)	133, 294, 1435, 1831, 1910
BstV2I	GAAGAC	1 cut(s)	2999
BstX2I	RGATCY	5 cut(s)	682, 1000, 1471, 1479, 1912
BstYI	RGATCY	5 cut(s)	682, 1000, 1471, 1479, 1912
BstZ17I	GTATAC	1 cut(s)	54
BsuRI	GGCC	2 cut(s)	473, 1528
BtgI	CCRYGG	1 cut(s)	1109
BtgZI	GCGATG	2 cut(s)	1002, 1419
BtrI	CACGTC	1 cut(s)	74
BtsCI	GGATG	4 cut(s)	517, 1463, 2239, 2922
BtsI	GCAGTG	3 cut(s)	246, 1265, 3004
BtsIMutI	CAGTG	6 cut(s)	246, 1077, 1265, 1338, 2389, 3004
Cac8I	GCNNGC	9 cut(s)	305, 445, 606, 985, 1078, 1133, 1659, 2041, 2712
CaiI	CAGNNNCTG	1 cut(s)	2431
CciI	TCATGA	1 cut(s)	2154
CfoI	GCGC	1 cut(s)	1082
Cfr13I	GGNCC	1 cut(s)	2980
CseI	GACGC	3 cut(s)	323, 752, 1127
CsiI	ACCWGGT	1 cut(s)	1948
DpnI	GATC	8 cut(s)	245, 545, 618, 684, 1002, 1473, 1481, 1914
DpnII	GATC	8 cut(s)	243, 543, 616, 682, 1000, 1471, 1479, 1912
DraI	TTTAAA	2 cut(s)	1086, 1681
DraIII	CACNNNGTG	1 cut(s)	1952
DriI	GACNNNNNGTC	2 cut(s)	333, 835
EaeI	YGGCCR	1 cut(s)	1526
Eam1104I	CTCTTC	3 cut(s)	432, 948, 1740
Eam1105I	GACNNNNNGTC	2 cut(s)	333, 835
EarI	CTCTTC	3 cut(s)	432, 948, 1740
Eco130I	CCWWGG	1 cut(s)	1109
Eco147I	AGGCCT	1 cut(s)	473
Eco24I	GRGCYC	1 cut(s)	1755
Eco31I	GGTCTC	1 cut(s)	1737
Eco32I	GATATC	2 cut(s)	1806, 1944
Eco47I	GGWCC	1 cut(s)	2980
Eco47III	AGCGCT	1 cut(s)	1081
Eco57I	CTGAAG	2 cut(s)	542, 671
Eco88I	CYCGRG	1 cut(s)	126
EcoO109I	RGGNCCY	1 cut(s)	2980
EcoRI	GAATTC	2 cut(s)	352, 667
EcoRII	CCWGG	4 cut(s)	468, 1948, 1974, 2982
EcoRV	GATATC	2 cut(s)	1806, 1944
EcoT14I	CCWWGG	1 cut(s)	1109
EcoT22I	ATGCAT	2 cut(s)	1354, 1431
EcoT38I	GRGCYC	1 cut(s)	1755
ErhI	CCWWGG	1 cut(s)	1109
Esp3I	CGTCTC	1 cut(s)	2807
FalI	AAGNNNNNCTT	2 cut(s)	1163, 1195
FaqI	GGGAC	3 cut(s)	2192, 2389, 2712
FauI	CCCGC	1 cut(s)	1012
FblI	GTMKAC	3 cut(s)	53, 1930, 2460
Fnu4HI	GCNGC	5 cut(s)	147, 283, 1449, 1820, 1924
FokI	GGATG	4 cut(s)	524, 1450, 2246, 2909
FriOI	GRGCYC	1 cut(s)	1755
Fsp4HI	GCNGC	5 cut(s)	147, 283, 1449, 1820, 1924
FspBI	CTAG	9 cut(s)	150, 852, 885, 1187, 1757, 2040, 2138, 2678, 2715
GlaI	GCGC	1 cut(s)	1081
GluI	GCNGC	5 cut(s)	147, 283, 1449, 1820, 1924
GsaI	CCCAGC	1 cut(s)	1619
GsuI	CTGGAG	4 cut(s)	140, 480, 2075, 2282
HaeII	RGCGCY	1 cut(s)	1083
HaeIII	GGCC	2 cut(s)	473, 1528
HapII	CCGG	3 cut(s)	677, 1456, 1920
HgaI	GACGC	3 cut(s)	323, 752, 1127
HhaI	GCGC	1 cut(s)	1082
Hin6I	GCGC	1 cut(s)	1080
HinP1I	GCGC	1 cut(s)	1080
HincII	GTYRAC	4 cut(s)	492, 1209, 2461, 2899
HindII	GTYRAC	4 cut(s)	492, 1209, 2461, 2899
HindIII	AAGCTT	3 cut(s)	1843, 1963, 1999
HpaI	GTTAAC	1 cut(s)	2899
HpaII	CCGG	3 cut(s)	677, 1456, 1920
HphI	GGTGA	9 cut(s)	206, 1938, 2026, 2036, 2213, 2219, 2225, 2231, 2536
HpyCH4III	ACNGT	7 cut(s)	58, 1018, 1072, 1333, 1905, 2384, 2607
HpyCH4IV	ACGT	2 cut(s)	73, 1673
HpyF10VI	GCNNNNNNNGC	6 cut(s)	340, 1225, 1349, 1606, 1971, 1980
HpySE526I	ACGT	2 cut(s)	73, 1673
HspAI	GCGC	1 cut(s)	1080
KspAI	GTTAAC	1 cut(s)	2899
Kzo9I	GATC	8 cut(s)	243, 543, 616, 682, 1000, 1471, 1479, 1912
LmnI	GCTCC	2 cut(s)	1758, 2056
Lsp1109I	GCAGC	5 cut(s)	133, 294, 1435, 1831, 1910
LweI	GCATC	3 cut(s)	456, 1472, 2089
MabI	ACCWGGT	1 cut(s)	1948
MaeI	CTAG	9 cut(s)	150, 852, 885, 1187, 1757, 2040, 2138, 2678, 2715
MaeII	ACGT	2 cut(s)	73, 1673
MaeIII	GTNAC	5 cut(s)	1066, 1196, 1420, 1574, 2660
MalI	GATC	8 cut(s)	245, 545, 618, 684, 1002, 1473, 1481, 1914
MboI	GATC	8 cut(s)	243, 543, 616, 682, 1000, 1471, 1479, 1912
MfeI	CAATTG	4 cut(s)	18, 42, 825, 2008
MflI	RGATCY	5 cut(s)	682, 1000, 1471, 1479, 1912
MhlI	GDGCHC	2 cut(s)	1556, 1755
MlsI	TGGCCA	1 cut(s)	1528
MluNI	TGGCCA	1 cut(s)	1528
MlyI	GAGTC	4 cut(s)	845, 2694, 2864, 3017
MmeI	TCCRAC	4 cut(s)	823, 1617, 1691, 1890
Mox20I	TGGCCA	1 cut(s)	1528
Mph1103I	ATGCAT	2 cut(s)	1354, 1431
MroXI	GAANNNNTTC	2 cut(s)	684, 2421
MscI	TGGCCA	1 cut(s)	1528
MslI	CAYNNNNRTG	3 cut(s)	210, 2173, 2520
Msp20I	TGGCCA	1 cut(s)	1528
MspA1I	CMGCKG	1 cut(s)	1657
MspCI	CTTAAG	3 cut(s)	1223, 2132, 2693
MspI	CCGG	3 cut(s)	677, 1456, 1920
MspR9I	CCNGG	5 cut(s)	470, 677, 1950, 1976, 2984
MunI	CAATTG	4 cut(s)	18, 42, 825, 2008
Mva1269I	GAATGC	2 cut(s)	284, 1985
MvaI	CCWGG	4 cut(s)	470, 1950, 1976, 2984
MvnI	CGCG	1 cut(s)	435
MwoI	GCNNNNNNNGC	6 cut(s)	340, 1225, 1349, 1606, 1971, 1980
NciI	CCSGG	1 cut(s)	677
NcoI	CCATGG	1 cut(s)	1109
NdeII	GATC	8 cut(s)	243, 543, 616, 682, 1000, 1471, 1479, 1912
NheI	GCTAGC	1 cut(s)	2039
NlaIV	GGNNCC	4 cut(s)	822, 1002, 1754, 2981
NmuCI	GTSAC	2 cut(s)	1066, 1420
NsiI	ATGCAT	2 cut(s)	1354, 1431
NspI	RCATGY	3 cut(s)	1131, 2093, 2668
PaeR7I	CTCGAG	1 cut(s)	126
PagI	TCATGA	1 cut(s)	2154
PceI	AGGCCT	1 cut(s)	473
PciI	ACATGT	2 cut(s)	2089, 2664
PctI	GAATGC	2 cut(s)	284, 1985
PdmI	GAANNNNTTC	2 cut(s)	684, 2421
PfeI	GAWTC	6 cut(s)	201, 1762, 2145, 2323, 2535, 2689
PfoI	TCCNGGA	1 cut(s)	2982
PkrI	GCNGC	5 cut(s)	148, 284, 1450, 1821, 1925
PleI	GAGTC	4 cut(s)	844, 2694, 2864, 3017
PpsI	GAGTC	4 cut(s)	844, 2694, 2864, 3017
PpuMI	RGGWCCY	1 cut(s)	2980
PscI	ACATGT	2 cut(s)	2089, 2664
PshAI	GACNNNNGTC	1 cut(s)	1386
PsiI	TTATAA	1 cut(s)	2843
Psp5II	RGGWCCY	1 cut(s)	2980
Psp6I	CCWGG	4 cut(s)	468, 1948, 1974, 2982
PspFI	CCCAGC	1 cut(s)	1615
PspGI	CCWGG	4 cut(s)	468, 1948, 1974, 2982
PspN4I	GGNNCC	4 cut(s)	822, 1002, 1754, 2981
PspPI	GGNCC	1 cut(s)	2980
PspPPI	RGGWCCY	1 cut(s)	2980
PspXI	VCTCGAGB	1 cut(s)	126
PsrI	GAACNNNNNNTAC	2 cut(s)	2076, 2108
PstNI	CAGNNNCTG	1 cut(s)	2431
PsuI	RGATCY	5 cut(s)	682, 1000, 1471, 1479, 1912
RseI	CAYNNNNRTG	3 cut(s)	210, 2173, 2520
SalI	GTCGAC	1 cut(s)	2459
SatI	GCNGC	5 cut(s)	147, 283, 1449, 1820, 1924
Sau3AI	GATC	8 cut(s)	243, 543, 616, 682, 1000, 1471, 1479, 1912
Sau96I	GGNCC	1 cut(s)	2980
ScaI	AGTACT	1 cut(s)	2830
SchI	GAGTC	4 cut(s)	845, 2694, 2864, 3017
ScrFI	CCNGG	5 cut(s)	470, 677, 1950, 1976, 2984
SduI	GDGCHC	2 cut(s)	1556, 1755
SexAI	ACCWGGT	1 cut(s)	1948
SfaNI	GCATC	3 cut(s)	456, 1472, 2089
SfcI	CTRYAG	3 cut(s)	744, 1294, 1927
Sfr274I	CTCGAG	1 cut(s)	126
SinI	GGWCC	1 cut(s)	2980
SlaI	CTCGAG	1 cut(s)	126
SmiMI	CAYNNNNRTG	3 cut(s)	210, 2173, 2520
SmlI	CTYRAG	7 cut(s)	126, 1223, 1376, 2132, 2693, 2832, 3018
SmoI	CTYRAG	7 cut(s)	126, 1223, 1376, 2132, 2693, 2832, 3018
SseBI	AGGCCT	1 cut(s)	473
SsiI	CCGC	7 cut(s)	423, 433, 1005, 1044, 1598, 1655, 2491
SspMI	CTAG	9 cut(s)	150, 852, 885, 1187, 1757, 2040, 2138, 2678, 2715
StuI	AGGCCT	1 cut(s)	473
StyD4I	CCNGG	5 cut(s)	468, 675, 1948, 1974, 2982
StyI	CCWWGG	1 cut(s)	1109
TaaI	ACNGT	7 cut(s)	58, 1018, 1072, 1333, 1905, 2384, 2607
TaiI	ACGT	2 cut(s)	76, 1676
TaqI	TCGA	7 cut(s)	127, 654, 2460, 2627, 2703, 2847, 2873
TatI	WGTACW	5 cut(s)	1290, 1864, 2569, 2828, 2914
TfiI	GAWTC	6 cut(s)	201, 1762, 2145, 2323, 2535, 2689
TscAI	CASTG	6 cut(s)	253, 1077, 1265, 1338, 2389, 3011
TseFI	GTSAC	2 cut(s)	1066, 1420
TseI	GCWGC	5 cut(s)	146, 282, 1448, 1819, 1923
Tsp45I	GTSAC	2 cut(s)	1066, 1420
TspGWI	ACGGA	4 cut(s)	570, 765, 2393, 2736
TspRI	CASTG	6 cut(s)	253, 1077, 1265, 1338, 2389, 3011
Vha464I	CTTAAG	3 cut(s)	1223, 2132, 2693
VneI	GTGCAC	1 cut(s)	1552
VpaK11BI	GGWCC	1 cut(s)	2980
XapI	RAATTY	4 cut(s)	352, 667, 1836, 2741
XbaI	TCTAGA	3 cut(s)	884, 1186, 2677
XceI	RCATGY	3 cut(s)	1131, 2093, 2668
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2156
XhoI	CTCGAG	1 cut(s)	126
XmiI	GTMKAC	3 cut(s)	53, 1930, 2460
XmnI	GAANNNNTTC	2 cut(s)	684, 2421
XspI	CTAG	9 cut(s)	150, 852, 885, 1187, 1757, 2040, 2138, 2678, 2715
ZrmI	AGTACT	1 cut(s)	2830
Zsp2I	ATGCAT	2 cut(s)	1354, 1431

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.