Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0005600

Physical Location & Seq

Genomic Coordinates Reverse (-)

42426049 .. 42432071

Gene Structure 6023 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG326900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2586 bp

ATGCTTAACTTGGCCAATTTGGCTGAAGAAGTTCAGATTGCATATCGGAGAAGGATAAAGTTGAAGAAGGGAGATTTTGTTGATGAAGCAAGTGCTACAACAGAGTCGGACATTGAAGAGACGTTCAAGAAGCTTGTGGGGCAACTGAAGAAGTCCCCACAAGAAGTTTTTGATGAATTGAAGAACCAGACTGTAGATTTGGTTCTAACCGCACATCCTACTCAGTCTGTTCGCAGATCTCTGCTTCAAAAGCATGCAAGGGTAAGAAATTGTTTGACGCAGTTGTATGCCAAGGATATTACACCTGATGATAAACAAGAACTCGATGAGGCTCTACAAAGGGAGATTCAAGCTGCATTTCGTACTGACGAAATCCGAAGGACTCCTCCAACCCCTCAAGATGAGATGAGGGCAGGAATGAGCTACTTTCATGAGACGATTTGGAAAGGTGTACCCAAATTCTTACGCCGAGTTGACACTGCCTTGAAGAACATTGGGATAAATGAACGTGTTCCTTACAATGCCCCTCTCATTCAATTTTCTTCTTGGATGGGTGGGGATCGTGATGGAAATCCCAGGGTCACTCCAGAAGTTACACGGGATGTATGCTTATTGGCTAGAATGATGGCTGCTAACTTGTATTTCTCCCAGATAGAGGATCTTATGTTTGAGTTATCTATGTGGCGTTGCAACGATGAGCTTCTTGCTCGTGCTCATGAACTTCATAGGTCTTCAAGGAAGGATGCAAAACACTATATAGAGTTTTGGAAACAAATTCCTCCAAATGAGCCATATCGTGTTATTCTTGGTGATGTGAGAGACAAACTCTACAATACACGTGAACGTGCTCGTCAATTACTATCCAATGGAACCTCTGACATTCCTGAGGACACAACTTTTACTAATGTTGAACAGTTCCTGGAGCCTCTCGAACTGTGTTACCGGTCACTCTGTTCCTGTGGTGACAAGCCAATTGCTGACGGGAGCCTTCTTGATTTCTTACGGCAAGTTTCTACTTTCGGACTTTGTCTTGTGAGACTAGACATACGGCAAGAATCAGACAGGCACACTGATGTCATTGATGCTATTACAAAGCACCTGGGCCTTGGGTCTTATCGAGAATGGCCTGAGAAACAAAGGCAAGAATGGCTGTTGTCTGAGCTCAGTGGAAAGCGCCCTCTTTTTGGCACTGATGTTCCCAAGACTGAAGAAATTTCTGATGTATTGGAGACATTCAAAGTCATTTCAGAACTTCCCTCAGACAACTTTGGTGCCTATATTATATCAATGGCAACAGCCGCATCTGATGTACTTGCTGTTGAGCTTTTGCAACGTGAATGCCGTGTGAAAAAGCCACTACGGGTTGTTCCATTGTTTGAGAAGCTTGCTGATTTAGAGGCTGCTCCTGCTGCTGTGGCTCGCCTCTTCTCTATAGATTGGTACAAAAACCGGATCAATGGGAAGCAAGAAGTCATGATAGGGTACTCAGATTCAGGAAAGGATGCAGGCCGTCTATCTGCAGCATGGCAGCTATACAAGGCTCAAGAAGAGCTCATAAAGGTTGCGAAACAATATGGAGTTAAGCTTACCATGTTTCATGGCCGAGGTGGAACGGTTGGAAGAGGAGGAGGACCCACTCATCTTGCTATATTGTCTCAGCCACCTGAGACAATTCACGGTTCACTCCGTGTAACAGTTCAAGGTGAAGTTATTGAACAATCATTTGGAGAGGAGCACTTGTGTTTTAGAACACTTCAGCGTTTCACAGCAGCCACACTAGAGCATGGCATGAATCCCCCAGTTTCGCCCAAGCCAGAATGGCGTGCACTCATGGATGAGATGGCAGTTGTTGCTACGGAGGAATACCGTTCAATAGTTTTCCAGGAACCCCGTTTTGTTGAATACTTTCGCCTTGCAACACCAGAGATGGAGTATGGTCGGATGAACATTGGGAGTCGTCCATCAAAGCGAAAGCCAAGTGGAGGCATCAAATCACTTCGAGCAATCCCATGGATCTTTGCATGGACCCAGACAAGATTTCACTTACCAGTGTGGCTTGGTTTTGGGGCAGCATTTAAGCAAGCCTTAGAGAAGGATGCAAAGAATCTTCAGATGCTTCGGGAGATGTATAATCAGTGGCCTTTCTTCAGAGTCACCATTGATTTAATTGAGATGGTGTTTGCCAAGGGAGACCCAGGTATTACAGCTCTTTATGACAAGCTTCTGGTGTCAGAAGACCTATGGTCATTTGGAGAGCGACTGAGGACCAACTATGAAGATACTAAACGCCTCCTACTCCAGGTTGCTGGGCACAGAAATCTTCTGGAAGGAGATCCTTACTTGAGGCAGAGACTTCTTCTTCGTGACTCGTATATTACAACACTGAATGTGTGCCAAGCCTATACGCTGAAGCAGATCCGTGACCCCAACTATCATGGTCAAGTAAGGCCATTAAAGGAACCAGCAAGGAAGCCAGCAGCAGAGCTCGTCAATCTTAACCCAACAAGCGAATATGCTCCAGGTCTAGAGGACACACTTATTTTGACCATGAAGGGTATTGCTGCTGGGATGCAGAACACTGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004611 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0007275 GO:0008150 GO:0008152 GO:0008964 GO:0009506 GO:0009507 GO:0009536 GO:0015977 GO:0016020 GO:0016829 GO:0016830 GO:0016831 GO:0030054 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0055044 GO:0071704 GO:0071944 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko00620 ko00680 ko00710 ko00720 ko01100 ko01120 ko01200 map00620 map00680 map00710 map00720 map01100 map01120 map01200

Pfam Domains

Protein Families

PEPcase

Protein Analysis

861

Amino Acids

98.45

Weight (kDa)

7.25

Isoelectric Point (pI)

41.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PEPcase	PF00311	1 - 861	0.0	Phosphoenolpyruvate carboxylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42600 AT2G42600 AT2G42600
fragaria_vesca	FvH4_6g27390 FvH4_6g27390 FvH4_6g27390 FvH4_6g33320
malus_domestica	MD09G1237900.v1.1 MD17G1230800.v1.1
prunus_persica	Prupe.3G118300_v2.0.a1
pyrus_communis	pycom09g15640 pycom17g23400
rosa_chinensis	RchiOBHm_Chr2g0090101 RchiOBHm_Chr2g0129661
rosa_laevigata	RLG00000016085 RLG00000019094
rosa_multiflora	Rmu_sc0008968.1_g000006 Rmu_sc0009263.1_g000005 Rmu_sc0020548.1_g000003
rosa_roxburghii	Rroxscaffold_2G00114470
rosa_rugosa	Rorug02G0005300 Rorug02G0288200
rosa_samantha	Rh2AG339500 Rh2BG348300 Rh2CG326900 Rh2DG366400
rosa_wichuraiana	Rw2G004560 Rw2G027850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1271
AciI	CCGC	2 cut(s)	210, 1299
AclWI	GGATC	6 cut(s)	567, 666, 1460, 2021, 2327, 2410
AcoI	YGGCCR	2 cut(s)	12, 1600
AcsI	RAATTY	3 cut(s)	458, 774, 1212
AcuI	CTGAAG	7 cut(s)	45, 167, 1227, 1739, 2093, 2131, 2429
AcvI	CACGTG	1 cut(s)	839
AdeI	CACNNNGTG	1 cut(s)	1688
AfaI	GTAC	5 cut(s)	364, 453, 1311, 1442, 1484
AfiI	CCNNNNNNNGG	4 cut(s)	655, 1184, 1982, 2299
AflIII	ACRYGT	2 cut(s)	508, 836
AgeI	ACCGGT	1 cut(s)	942
AhdI	GACNNNNNGTC	1 cut(s)	2242
AjnI	CCWGG	7 cut(s)	575, 918, 1098, 1881, 2194, 2298, 2518
AjuI	GAANNNNNNNTTGG	2 cut(s)	1707, 1739
Alw21I	GWGCWC	7 cut(s)	715, 850, 1164, 1554, 1737, 1828, 2487
Alw26I	GTCTC	9 cut(s)	113, 428, 813, 1030, 1223, 1659, 1661, 2184, 2344
Alw44I	GTGCAC	1 cut(s)	1824
AlwI	GGATC	6 cut(s)	567, 666, 1460, 2021, 2327, 2410
AlwNI	CAGNNNCTG	1 cut(s)	919
AoxI	GGCC	7 cut(s)	12, 1102, 1124, 1507, 1600, 2138, 2447
ApaLI	GTGCAC	1 cut(s)	1824
ApoI	RAATTY	3 cut(s)	458, 774, 1212
ArsI	GACNNNNNNTTYG	4 cut(s)	181, 213, 2343, 2375
AsiGI	ACCGGT	1 cut(s)	942
Asp700I	GAANNNNTTC	3 cut(s)	30, 510, 1905
AspLEI	GCGC	1 cut(s)	1176
AspS9I	GGNCC	4 cut(s)	1102, 1631, 2025, 2265
AsuHPI	GGTGA	4 cut(s)	821, 974, 1715, 2146
AvaII	GGWCC	3 cut(s)	1631, 2025, 2265
AxyI	CCTNAGG	1 cut(s)	885
BaeGI	GKGCMC	2 cut(s)	1828, 2313
BalI	TGGCCA	1 cut(s)	14
BanI	GGYRCC	1 cut(s)	1271
BanII	GRGCYC	3 cut(s)	1164, 1554, 2487
BauI	CACGAG	1 cut(s)	708
BbrPI	CACGTG	1 cut(s)	839
BbsI	GAAGAC	2 cut(s)	723, 2241
Bbv12I	GWGCWC	7 cut(s)	715, 850, 1164, 1554, 1737, 1828, 2487
BccI	CCATC	7 cut(s)	544, 560, 619, 1834, 1921, 1969, 2167
BceAI	ACGGC	4 cut(s)	1019, 1064, 1326, 1494
BciT130I	CCWGG	7 cut(s)	577, 920, 1100, 1883, 2196, 2300, 2520
BcoDI	GTCTC	9 cut(s)	113, 428, 813, 1030, 1223, 1659, 1661, 2184, 2344
BfaI	CTAG	4 cut(s)	618, 1040, 1778, 2525
BfmI	CTRYAG	3 cut(s)	192, 1431, 1518
BfoI	RGCGCY	1 cut(s)	1177
BglI	GCCNNNNNGGC	2 cut(s)	20, 1819
BglII	AGATCT	1 cut(s)	236
Bme1390I	CCNGG	7 cut(s)	577, 920, 1100, 1883, 2196, 2300, 2520
Bme18I	GGWCC	3 cut(s)	1631, 2025, 2265
BmeRI	GACNNNNNGTC	1 cut(s)	2242
BmgT120I	GGNCC	4 cut(s)	1102, 1631, 2025, 2265
BmiI	GGNNCC	8 cut(s)	871, 924, 986, 1273, 1633, 1887, 2027, 2460
BmrFI	CCNGG	7 cut(s)	577, 920, 1100, 1883, 2196, 2300, 2520
BmrI	ACTGGG	1 cut(s)	1793
BmsI	GCATC	8 cut(s)	733, 1072, 1310, 1492, 1995, 2086, 2103, 2559
BmuI	ACTGGG	1 cut(s)	1793
BpiI	GAAGAC	2 cut(s)	723, 2241
BplI	GAGNNNNNCTC	2 cut(s)	810, 842
BpmI	CTGGAG	4 cut(s)	570, 941, 2282, 2502
BpuEI	CTTGAG	3 cut(s)	381, 1527, 2362
BsaAI	YACGTR	1 cut(s)	839
BsaBI	GATNNNNATC	1 cut(s)	570
BsaI	GGTCTC	1 cut(s)	2184
BsaJI	CCNNGG	9 cut(s)	291, 575, 576, 1099, 1105, 1603, 2009, 2184, 2194
BsaWI	WCCGGW	2 cut(s)	942, 1449
BsaXI	ACNNNNNCTCC	4 cut(s)	63, 93, 1724, 1754
Bsc4I	CCNNNNNNNGG	4 cut(s)	655, 1184, 1982, 2299
Bse118I	RCCGGY	1 cut(s)	942
Bse1I	ACTGG	3 cut(s)	1799, 2048, 2584
Bse21I	CCTNAGG	1 cut(s)	885
Bse8I	GATNNNNATC	1 cut(s)	570
BseBI	CCWGG	7 cut(s)	577, 920, 1100, 1883, 2196, 2300, 2520
BseDI	CCNNGG	9 cut(s)	291, 575, 576, 1099, 1105, 1603, 2009, 2184, 2194
BseGI	GGATG	9 cut(s)	214, 555, 607, 748, 1507, 1840, 1947, 2101, 2574
BseJI	GATNNNNATC	1 cut(s)	570
BseLI	CCNNNNNNNGG	4 cut(s)	655, 1184, 1982, 2299
BseNI	ACTGG	3 cut(s)	1799, 2048, 2584
BseRI	GAGGAG	4 cut(s)	375, 1638, 1641, 1745
BseSI	GKGCMC	2 cut(s)	1828, 2313
BseYI	CCCAGC	2 cut(s)	2306, 2564
BshFI	GGCC	7 cut(s)	14, 1104, 1126, 1509, 1602, 2140, 2449
BshNI	GGYRCC	1 cut(s)	1271
BshTI	ACCGGT	1 cut(s)	942
BsiHKAI	GWGCWC	7 cut(s)	715, 850, 1164, 1554, 1737, 1828, 2487
BsiSI	CCGG	2 cut(s)	943, 1450
BslFI	GGGAC	1 cut(s)	139
BslI	CCNNNNNNNGG	4 cut(s)	655, 1184, 1982, 2299
BsmAI	GTCTC	9 cut(s)	113, 428, 813, 1030, 1223, 1659, 1661, 2184, 2344
BsmBI	CGTCTC	2 cut(s)	113, 428
BsmFI	GGGAC	1 cut(s)	139
BsmI	GAATGC	1 cut(s)	1343
BsnI	GGCC	7 cut(s)	14, 1104, 1126, 1509, 1602, 2140, 2449
Bso31I	GGTCTC	1 cut(s)	2184
Bsp1286I	GDGCHC	8 cut(s)	715, 850, 1164, 1554, 1737, 1828, 2313, 2487
Bsp143I	GATC	7 cut(s)	236, 559, 658, 1452, 2013, 2332, 2415
Bsp19I	CCATGG	1 cut(s)	2009
BspACI	CCGC	2 cut(s)	210, 1299
BspANI	GGCC	7 cut(s)	14, 1104, 1126, 1509, 1602, 2140, 2449
BspHI	TCATGA	3 cut(s)	430, 715, 1473
BspLI	GGNNCC	8 cut(s)	871, 924, 986, 1273, 1633, 1887, 2027, 2460
BspMAI	CTGCAG	1 cut(s)	1522
BspPI	GGATC	6 cut(s)	567, 666, 1460, 2021, 2327, 2410
BspQI	GCTCTTC	1 cut(s)	1542
BspT107I	GGYRCC	1 cut(s)	1271
BspTNI	GGTCTC	1 cut(s)	2184
BsrFI	RCCGGY	1 cut(s)	942
BsrI	ACTGG	3 cut(s)	1799, 2048, 2584
BssAI	RCCGGY	1 cut(s)	942
BssECI	CCNNGG	9 cut(s)	291, 575, 576, 1099, 1105, 1603, 2009, 2184, 2194
BssMI	GATC	7 cut(s)	236, 559, 658, 1452, 2013, 2332, 2415
BssSI	CACGAG	1 cut(s)	708
BssT1I	CCWWGG	4 cut(s)	291, 1105, 2009, 2184
Bst2BI	CACGAG	1 cut(s)	708
Bst2UI	CCWGG	7 cut(s)	577, 920, 1100, 1883, 2196, 2300, 2520
Bst4CI	ACNGT	7 cut(s)	193, 915, 936, 1615, 1679, 1696, 1868
Bst6I	CTCTTC	4 cut(s)	111, 1430, 1542, 1615
BstAPI	GCANNNNNTGC	1 cut(s)	1850
BstBAI	YACGTR	1 cut(s)	839
BstC8I	GCNNGC	7 cut(s)	255, 1386, 1420, 1507, 1824, 2082, 2475
BstDSI	CCRYGG	1 cut(s)	2009
BstENI	CCTNNNNNAGG	1 cut(s)	2297
BstF5I	GGATG	9 cut(s)	214, 555, 607, 748, 1507, 1840, 1947, 2101, 2574
BstH2I	RGCGCY	1 cut(s)	1177
BstHHI	GCGC	1 cut(s)	1176
BstKTI	GATC	7 cut(s)	239, 562, 661, 1455, 2016, 2335, 2418
BstMAI	GTCTC	9 cut(s)	113, 428, 813, 1030, 1223, 1659, 1661, 2184, 2344
BstMBI	GATC	7 cut(s)	236, 559, 658, 1452, 2013, 2332, 2415
BstNI	CCWGG	7 cut(s)	577, 920, 1100, 1883, 2196, 2300, 2520
BstNSI	RCATGY	1 cut(s)	257
BstSCI	CCNGG	7 cut(s)	575, 918, 1098, 1881, 2194, 2298, 2518
BstSFI	CTRYAG	3 cut(s)	192, 1431, 1518
BstSLI	GKGCMC	2 cut(s)	1828, 2313
BstV2I	GAAGAC	2 cut(s)	723, 2241
BstX2I	RGATCY	5 cut(s)	236, 658, 2013, 2332, 2415
BstXI	CCANNNNNNTGG	1 cut(s)	2306
BstYI	RGATCY	5 cut(s)	236, 658, 2013, 2332, 2415
Bsu36I	CCTNAGG	1 cut(s)	885
BsuRI	GGCC	7 cut(s)	14, 1104, 1126, 1509, 1602, 2140, 2449
BtgI	CCRYGG	1 cut(s)	2009
BtsCI	GGATG	9 cut(s)	214, 555, 607, 748, 1507, 1840, 1947, 2101, 2574
BtsI	GCAGTG	1 cut(s)	477
BtsIMutI	CAGTG	8 cut(s)	477, 1068, 1171, 1188, 2055, 2141, 2381, 2577
Cac8I	GCNNGC	7 cut(s)	255, 1386, 1420, 1507, 1824, 2082, 2475
CaiI	CAGNNNCTG	1 cut(s)	919
CciI	TCATGA	3 cut(s)	430, 715, 1473
CfoI	GCGC	1 cut(s)	1176
Cfr10I	RCCGGY	1 cut(s)	942
Cfr13I	GGNCC	4 cut(s)	1102, 1631, 2025, 2265
CseI	GACGC	1 cut(s)	286
Csp6I	GTAC	5 cut(s)	363, 452, 1310, 1441, 1483
CspAI	ACCGGT	1 cut(s)	942
CspCI	CAANNNNNGTGG	2 cut(s)	1624, 1659
CviQI	GTAC	5 cut(s)	363, 452, 1310, 1441, 1483
DpnI	GATC	7 cut(s)	238, 561, 660, 1454, 2015, 2334, 2417
DpnII	GATC	7 cut(s)	236, 559, 658, 1452, 2013, 2332, 2415
DraIII	CACNNNGTG	1 cut(s)	1688
DriI	GACNNNNNGTC	1 cut(s)	2242
EaeI	YGGCCR	2 cut(s)	12, 1600
Eam1104I	CTCTTC	4 cut(s)	111, 1430, 1542, 1615
Eam1105I	GACNNNNNGTC	1 cut(s)	2242
EarI	CTCTTC	4 cut(s)	111, 1430, 1542, 1615
Ecl136II	GAGCTC	3 cut(s)	1162, 1552, 2485
Eco130I	CCWWGG	4 cut(s)	291, 1105, 2009, 2184
Eco24I	GRGCYC	3 cut(s)	1164, 1554, 2487
Eco31I	GGTCTC	1 cut(s)	2184
Eco47I	GGWCC	3 cut(s)	1631, 2025, 2265
Eco53kI	GAGCTC	3 cut(s)	1162, 1552, 2485
Eco57I	CTGAAG	7 cut(s)	45, 167, 1227, 1739, 2093, 2131, 2429
Eco72I	CACGTG	1 cut(s)	839
Eco81I	CCTNAGG	1 cut(s)	885
EcoICRI	GAGCTC	3 cut(s)	1162, 1552, 2485
EcoNI	CCTNNNNNAGG	1 cut(s)	2297
EcoO109I	RGGNCCY	1 cut(s)	1631
EcoRII	CCWGG	7 cut(s)	575, 918, 1098, 1881, 2194, 2298, 2518
EcoT14I	CCWWGG	4 cut(s)	291, 1105, 2009, 2184
EcoT38I	GRGCYC	3 cut(s)	1164, 1554, 2487
ErhI	CCWWGG	4 cut(s)	291, 1105, 2009, 2184
Esp3I	CGTCTC	2 cut(s)	113, 428
FalI	AAGNNNNNCTT	2 cut(s)	2069, 2101
FaqI	GGGAC	1 cut(s)	139
FokI	GGATG	9 cut(s)	201, 562, 614, 755, 1514, 1847, 1954, 2108, 2581
FriOI	GRGCYC	3 cut(s)	1164, 1554, 2487
FspBI	CTAG	4 cut(s)	618, 1040, 1778, 2525
GlaI	GCGC	1 cut(s)	1175
GsaI	CCCAGC	2 cut(s)	2310, 2568
GsuI	CTGGAG	4 cut(s)	570, 941, 2282, 2502
HaeII	RGCGCY	1 cut(s)	1177
HaeIII	GGCC	7 cut(s)	14, 1104, 1126, 1509, 1602, 2140, 2449
HapII	CCGG	2 cut(s)	943, 1450
HgaI	GACGC	1 cut(s)	286
HhaI	GCGC	1 cut(s)	1176
Hin6I	GCGC	1 cut(s)	1174
HinP1I	GCGC	1 cut(s)	1174
HincII	GTYRAC	1 cut(s)	475
HindII	GTYRAC	1 cut(s)	475
HindIII	AAGCTT	4 cut(s)	131, 1382, 1583, 2219
HpaII	CCGG	2 cut(s)	943, 1450
HphI	GGTGA	4 cut(s)	821, 974, 1715, 2146
Hpy166II	GTNNAC	5 cut(s)	452, 475, 842, 1682, 1826
Hpy8I	GTNNAC	5 cut(s)	452, 475, 842, 1682, 1826
HpyAV	CCTTC	8 cut(s)	45, 61, 372, 733, 998, 2086, 2321, 2545
HpyCH4III	ACNGT	7 cut(s)	193, 915, 936, 1615, 1679, 1696, 1868
HpyCH4IV	ACGT	5 cut(s)	122, 508, 838, 844, 1333
HpySE526I	ACGT	5 cut(s)	122, 508, 838, 844, 1333
HspAI	GCGC	1 cut(s)	1174
Kzo9I	GATC	7 cut(s)	236, 559, 658, 1452, 2013, 2332, 2415
LguI	GCTCTTC	1 cut(s)	1542
LmnI	GCTCC	5 cut(s)	922, 984, 1408, 1732, 2521
LweI	GCATC	8 cut(s)	733, 1072, 1310, 1492, 1995, 2086, 2103, 2559
MaeI	CTAG	4 cut(s)	618, 1040, 1778, 2525
MaeII	ACGT	5 cut(s)	122, 508, 838, 844, 1333
MaeIII	GTNAC	9 cut(s)	580, 592, 938, 945, 962, 1690, 2152, 2363, 2420
MalI	GATC	7 cut(s)	238, 561, 660, 1454, 2015, 2334, 2417
MboI	GATC	7 cut(s)	236, 559, 658, 1452, 2013, 2332, 2415
MfeI	CAATTG	1 cut(s)	972
MflI	RGATCY	5 cut(s)	236, 658, 2013, 2332, 2415
MhlI	GDGCHC	8 cut(s)	715, 850, 1164, 1554, 1737, 1828, 2313, 2487
MlsI	TGGCCA	1 cut(s)	14
MluNI	TGGCCA	1 cut(s)	14
MlyI	GAGTC	5 cut(s)	113, 376, 1963, 2160, 2360
MmeI	TCCRAC	4 cut(s)	87, 413, 1597, 1919
Mox20I	TGGCCA	1 cut(s)	14
MroXI	GAANNNNTTC	3 cut(s)	30, 510, 1905
MscI	TGGCCA	1 cut(s)	14
MseI	TTAA	6 cut(s)	6, 1581, 2076, 2165, 2453, 2496
MslI	CAYNNNNRTG	1 cut(s)	1071
Msp20I	TGGCCA	1 cut(s)	14
MspI	CCGG	2 cut(s)	943, 1450
MspR9I	CCNGG	7 cut(s)	577, 920, 1100, 1883, 2196, 2300, 2520
MunI	CAATTG	1 cut(s)	972
Mva1269I	GAATGC	1 cut(s)	1343
MvaI	CCWGG	7 cut(s)	577, 920, 1100, 1883, 2196, 2300, 2520
NcoI	CCATGG	1 cut(s)	2009
NdeII	GATC	7 cut(s)	236, 559, 658, 1452, 2013, 2332, 2415
NlaIV	GGNNCC	8 cut(s)	871, 924, 986, 1273, 1633, 1887, 2027, 2460
NmeAIII	GCCGAG	2 cut(s)	494, 1628
NmuCI	GTSAC	6 cut(s)	580, 945, 962, 2152, 2363, 2420
NspI	RCATGY	1 cut(s)	257
PaeI	GCATGC	1 cut(s)	257
PagI	TCATGA	3 cut(s)	430, 715, 1473
PasI	CCCWGGG	1 cut(s)	576
PciSI	GCTCTTC	1 cut(s)	1542
PcsI	WCGNNNNNNNCGW	1 cut(s)	1339
PctI	GAATGC	1 cut(s)	1343
PdmI	GAANNNNTTC	3 cut(s)	30, 510, 1905
PfeI	GAWTC	5 cut(s)	346, 1055, 1490, 1792, 2104
PflFI	GACNNNGTC	1 cut(s)	1026
PfoI	TCCNGGA	2 cut(s)	918, 1881
PinAI	ACCGGT	1 cut(s)	942
PleI	GAGTC	5 cut(s)	112, 376, 1962, 2159, 2360
PmaCI	CACGTG	1 cut(s)	839
PmlI	CACGTG	1 cut(s)	839
PpsI	GAGTC	5 cut(s)	112, 376, 1962, 2159, 2360
Ppu21I	YACGTR	1 cut(s)	839
PpuMI	RGGWCCY	1 cut(s)	1631
Psp124BI	GAGCTC	3 cut(s)	1164, 1554, 2487
Psp5II	RGGWCCY	1 cut(s)	1631
Psp6I	CCWGG	7 cut(s)	575, 918, 1098, 1881, 2194, 2298, 2518
PspCI	CACGTG	1 cut(s)	839
PspFI	CCCAGC	2 cut(s)	2306, 2564
PspGI	CCWGG	7 cut(s)	575, 918, 1098, 1881, 2194, 2298, 2518
PspN4I	GGNNCC	8 cut(s)	871, 924, 986, 1273, 1633, 1887, 2027, 2460
PspPI	GGNCC	4 cut(s)	1102, 1631, 2025, 2265
PspPPI	RGGWCCY	1 cut(s)	1631
PsrI	GAACNNNNNNTAC	2 cut(s)	186, 218
PstI	CTGCAG	1 cut(s)	1522
PstNI	CAGNNNCTG	1 cut(s)	919
PsuI	RGATCY	5 cut(s)	236, 658, 2013, 2332, 2415
PsyI	GACNNNGTC	1 cut(s)	1026
RsaI	GTAC	5 cut(s)	364, 453, 1311, 1442, 1484
RsaNI	GTAC	5 cut(s)	363, 452, 1310, 1441, 1483
RseI	CAYNNNNRTG	1 cut(s)	1071
SacI	GAGCTC	3 cut(s)	1164, 1554, 2487
SapI	GCTCTTC	1 cut(s)	1542
SaqAI	TTAA	6 cut(s)	6, 1581, 2076, 2165, 2453, 2496
Sau3AI	GATC	7 cut(s)	236, 559, 658, 1452, 2013, 2332, 2415
Sau96I	GGNCC	4 cut(s)	1102, 1631, 2025, 2265
SchI	GAGTC	5 cut(s)	113, 376, 1963, 2160, 2360
ScrFI	CCNGG	7 cut(s)	577, 920, 1100, 1883, 2196, 2300, 2520
SduI	GDGCHC	8 cut(s)	715, 850, 1164, 1554, 1737, 1828, 2313, 2487
SfaNI	GCATC	8 cut(s)	733, 1072, 1310, 1492, 1995, 2086, 2103, 2559
SfcI	CTRYAG	3 cut(s)	192, 1431, 1518
SinI	GGWCC	3 cut(s)	1631, 2025, 2265
SmiMI	CAYNNNNRTG	1 cut(s)	1071
SmlI	CTYRAG	3 cut(s)	396, 1542, 2341
SmoI	CTYRAG	3 cut(s)	396, 1542, 2341
SphI	GCATGC	1 cut(s)	257
SsiI	CCGC	2 cut(s)	210, 1299
SspMI	CTAG	4 cut(s)	618, 1040, 1778, 2525
SstI	GAGCTC	3 cut(s)	1164, 1554, 2487
StyD4I	CCNGG	7 cut(s)	575, 918, 1098, 1881, 2194, 2298, 2518
StyI	CCWWGG	4 cut(s)	291, 1105, 2009, 2184
TaaI	ACNGT	7 cut(s)	193, 915, 936, 1615, 1679, 1696, 1868
TaiI	ACGT	5 cut(s)	125, 511, 841, 847, 1336
TaqI	TCGA	4 cut(s)	324, 930, 1117, 1999
TatI	WGTACW	1 cut(s)	1309
TauI	GCSGC	1 cut(s)	1301
TfiI	GAWTC	5 cut(s)	346, 1055, 1490, 1792, 2104
Tru1I	TTAA	6 cut(s)	6, 1581, 2076, 2165, 2453, 2496
Tru9I	TTAA	6 cut(s)	6, 1581, 2076, 2165, 2453, 2496
TscAI	CASTG	8 cut(s)	484, 1075, 1171, 1195, 2055, 2141, 2388, 2584
TseFI	GTSAC	6 cut(s)	580, 945, 962, 2152, 2363, 2420
Tsp45I	GTSAC	6 cut(s)	580, 945, 962, 2152, 2363, 2420
TspGWI	ACGGA	3 cut(s)	1676, 1871, 2408
TspRI	CASTG	8 cut(s)	484, 1075, 1171, 1195, 2055, 2141, 2388, 2584
Tth111I	GACNNNGTC	1 cut(s)	1026
VneI	GTGCAC	1 cut(s)	1824
VpaK11BI	GGWCC	3 cut(s)	1631, 2025, 2265
XagI	CCTNNNNNAGG	1 cut(s)	2297
XapI	RAATTY	3 cut(s)	458, 774, 1212
XbaI	TCTAGA	1 cut(s)	2524
XceI	RCATGY	1 cut(s)	257
XmnI	GAANNNNTTC	3 cut(s)	30, 510, 1905
XspI	CTAG	4 cut(s)	618, 1040, 1778, 2525

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.