AT2G42920

pentatricopeptide

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0015328
Physical Location & Seq
Forward (+)
17858655 .. 17863466
4812 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G42920.2

Sequence Viewer

Length: 1680 bp
ATGTCTCCGACGATCTTATCCTTCTCCGGTGTGACGGTGCCGGCGATGCCGTCATCAGGTTCCCTCTCCGGCAACACTTATCTCCGATTGATAGACACACAATGTAGTACGATGAGAGAACTTAAGCAAATCCACGCCAGTCTCATCAAAACCGGTTTAATTTCCGATACTGTTACCGCGAGCCGTGTCCTCGCCTTCTGCTGTGCGTCTCCGTCAGACATGAATTACGCTTATTTGGTATTCACTAGGATCAATCACAAGAACCCATTTGTCTGGAACACTATAATCCGTGGTTTCTCACGGAGCTCGTTTCCAGAGATGGCTATTTCGATTTTCATTGACATGTTGTGTTCTTCTCCGTCTGTGAAGCCGCAGAGATTGACTTATCCTTCGGTGTTCAAAGCTTATGGTAGACTTGGCCAAGCTCGTGATGGGAGGCAATTACATGGGATGGTTATTAAAGAGGGACTTGAAGACGACTCGTTTATACGGAATACGATGTTGCATATGTACGTGACTTGTGGGTGTTTGATTGAAGCTTGGAGAATCTTTCTGGGGATGATAGGTTTTGATGTTGTTGCTTGGAATTCAATGATTATGGGTTTTGCGAAATGTGGATTGATTGATCAGGCGCAGAACCTGTTTGATGAAATGCCGCAGAGAAATGGAGTTTCTTGGAATTCGATGATTAGTGGGTTTGTGAGGAATGGTAGATTTAAGGATGCGTTGGATATGTTTCGAGAGATGCAGGAGAAAGATGTGAAACCTGATGGGTTTACAATGGTGAGTCTGTTGAATGCTTGTGCGTACCTTGGAGCAAGTGAGCAAGGGAGATGGATACATGAGTACATAGTGAGGAATCGGTTTGAATTGAATAGTATAGTTGTTACAGCACTCATAGATATGTACTGTAAGTGTGGGTGCATTGAGGAAGGTCTAAATGTGTTTGAGTGTGCTCCTAAGAAGCAGTTATCGTGTTGGAATTCGATGATTCTTGGTCTAGCTAATAACGGATTCGAGGAAAGGGCCATGGATTTGTTCTCGGAGTTAGAGCGTTCTGGCTTGGAACCAGATTCAGTCAGCTTCATTGGTGTTTTAACAGCTTGTGCTCACTCCGGGGAAGTACATAGAGCTGATGAATTTTTCAGATTGATGAAAGAAAAATATATGATTGAGCCATCAATAAAACACTATACTTTAATGGTTAATGTGCTGGGTGGAGCGGGGCTCCTCGAAGAAGCAGAAGCATTGATAAAGAATATGCCGGTGGAAGAAGACACTGTTATATGGAGTTCTTTGCTTTCTGCCTGCAGGAAAATCGGTAATGTTGAGATGGCTAAACGAGCAGCAAAATGTTTGAAGAAGCTCGATCCAGATGAAACGTGTGGTTATGTTCTCTTGTCTAATGCTTATGCTTCTTATGGCTTGTTCGAAGAGGCAGTTGAGCAGAGGCTTTTGATGAAGGAAAGACAAATGGAGAAAGAAGTTGGCTGCAGTTCGATTGAAGTGGATTTTGAAGTTCATGAGTTTATATCTTGTGGGGGAACGCATCCTAAATCCGCAGAGATTTACAGTTTACTCGATATCTTAAACTGGGATGTCTCTACAATTAAATCAGGTTTCGCTGAATTGTTTGATGCTACAACTAGGATTGGTTTCACTTATCTGGCAGAGAAATAA

Protein Analysis

559

Amino Acids

62.66

Weight (kDa)

5.48

Isoelectric Point (pI)

42.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 191 - 222 4e-07 PPR repeat family
PPR_1 PF12854 191 - 218 2.1e-07 PPR repeat
PPR PF01535 193 - 222 1.3e-07 PPR repeat
PPR_2 PF13041 222 - 269 2.6e-14 PPR repeat family
PPR_1 PF12854 222 - 250 1.6e-06 PPR repeat
PPR PF01535 224 - 254 1.3e-10 PPR repeat
PPR_2 PF13041 326 - 371 1.9e-07 PPR repeat family
PPR_3 PF13812 346 - 407 9.4e-08 Pentatricopeptide repeat domain
E_motif PF20431 442 - 502 6.4e-12 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015328)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G42920 AT2G42920
fragaria_vesca FvH4_6g38310
malus_domestica MD09G1151200.v1.1 MD17G1138800.v1.1
prunus_persica Prupe.3G173600_v2.0.a1
pyrus_communis pycom17g13190
rosa_chinensis RchiOBHm_Chr2g0151611
rosa_laevigata RLG00000020563
rosa_multiflora Rmu_sc0005287.1_g000006
rosa_roxburghii Rroxscaffold_2G00096320
rosa_rugosa Rorug02G0427200
rosa_samantha Rh2AG488100 Rh2BG500700 Rh2CG474600
rosa_wichuraiana Rw2G040010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 37
AccBSI CCGCTC 1 cut(s) 1223
AccI GTMKAC 1 cut(s) 412
AccII CGCG 1 cut(s) 179
AciI CCGC 5 cut(s) 177, 371, 656, 1223, 1560
AclWI GGATC 2 cut(s) 257, 1364
AcoI YGGCCR 1 cut(s) 418
AcsI RAATTY 4 cut(s) 586, 679, 982, 1139
AfaI GTAC 6 cut(s) 109, 512, 809, 848, 908, 1125
AfiI CCNNNNNNNGG 1 cut(s) 56
AflII CTTAAG 1 cut(s) 122
AflIII ACRYGT 2 cut(s) 342, 1382
AgeI ACCGGT 1 cut(s) 152
AluBI AGCT 9 cut(s) 306, 404, 425, 539, 1004, 1083, 1103, 1133, 1366
AluI AGCT 9 cut(s) 306, 404, 425, 539, 1004, 1083, 1103, 1133, 1366
Alw21I GWGCWC 3 cut(s) 308, 958, 1111
Alw26I GTCTC 4 cut(s) 9, 146, 213, 1606
AlwI GGATC 2 cut(s) 257, 1364
AlwNI CAGNNNCTG 1 cut(s) 640
AoxI GGCC 2 cut(s) 418, 1026
ApeKI GCWGC 2 cut(s) 1346, 1491
ApoI RAATTY 4 cut(s) 586, 679, 982, 1139
ArsI GACNNNNNNTTYG 2 cut(s) 373, 405
AsiGI ACCGGT 1 cut(s) 152
AspLEI GCGC 1 cut(s) 634
AspS9I GGNCC 1 cut(s) 1026
AsuC2I CCSGG 1 cut(s) 1117
AsuHPI GGTGA 1 cut(s) 796
AsuII TTCGAA 1 cut(s) 1431
BaeI ACNNNNGTAYC 2 cut(s) 830, 863
BalI TGGCCA 1 cut(s) 420
BanI GGYRCC 1 cut(s) 37
BanII GRGCYC 2 cut(s) 308, 1230
BauI CACGAG 1 cut(s) 426
BbsI GAAGAC 2 cut(s) 480, 1281
Bbv12I GWGCWC 3 cut(s) 308, 958, 1111
BbvI GCAGC 2 cut(s) 1358, 1478
BccI CCATC 7 cut(s) 313, 425, 445, 764, 828, 1186, 1327
BceAI ACGGC 2 cut(s) 34, 168
BcgI CGANNNNNNTGC 2 cut(s) 1300, 1334
BciVI GTATCC 1 cut(s) 831
BclI TGATCA 1 cut(s) 625
BcnI CCSGG 1 cut(s) 1117
BcoDI GTCTC 4 cut(s) 9, 146, 213, 1606
BfaI CTAG 3 cut(s) 246, 1001, 1647
BfmI CTRYAG 2 cut(s) 1309, 1492
BfrI CTTAAG 1 cut(s) 122
BfuI GTATCC 1 cut(s) 831
BisI GCNGC 4 cut(s) 371, 656, 1347, 1492
BlsI GCNGC 4 cut(s) 372, 657, 1348, 1493
Bme1390I CCNGG 1 cut(s) 1117
BmgT120I GGNCC 1 cut(s) 1026
BmiI GGNNCC 4 cut(s) 39, 61, 1068, 1229
BmrFI CCNGG 1 cut(s) 1117
BmrI ACTGGG 1 cut(s) 1603
BmsI GCATC 5 cut(s) 36, 712, 735, 1558, 1627
BmuI ACTGGG 1 cut(s) 1603
BpiI GAAGAC 2 cut(s) 480, 1281
BplI GAGNNNNNCTC 2 cut(s) 1212, 1244
Bpu14I TTCGAA 1 cut(s) 1431
BpuMI CCSGG 1 cut(s) 1117
BsaAI YACGTR 1 cut(s) 514
BsaJI CCNNGG 4 cut(s) 289, 811, 1029, 1116
BsaWI WCCGGW 2 cut(s) 26, 152
Bsc4I CCNNNNNNNGG 1 cut(s) 56
Bse118I RCCGGY 3 cut(s) 40, 152, 1264
Bse1I ACTGG 2 cut(s) 138, 1598
BseDI CCNNGG 4 cut(s) 289, 811, 1029, 1116
BseGI GGATG 5 cut(s) 456, 564, 727, 1549, 1603
BseLI CCNNNNNNNGG 1 cut(s) 56
BseNI ACTGG 2 cut(s) 138, 1598
BseRI GAGGAG 1 cut(s) 1220
BseXI GCAGC 2 cut(s) 1358, 1478
BseYI CCCAGC 1 cut(s) 1213
Bsh1236I CGCG 1 cut(s) 179
BshFI GGCC 2 cut(s) 420, 1028
BshNI GGYRCC 1 cut(s) 37
BshTI ACCGGT 1 cut(s) 152
BsiHKAI GWGCWC 3 cut(s) 308, 958, 1111
BsiSI CCGG 6 cut(s) 27, 41, 69, 153, 1116, 1265
BslFI GGGAC 1 cut(s) 480
BslI CCNNNNNNNGG 1 cut(s) 56
BsmAI GTCTC 4 cut(s) 9, 146, 213, 1606
BsmBI CGTCTC 1 cut(s) 213
BsmFI GGGAC 1 cut(s) 480
BsmI GAATGC 1 cut(s) 802
BsnI GGCC 2 cut(s) 420, 1028
Bsp119I TTCGAA 1 cut(s) 1431
Bsp1286I GDGCHC 4 cut(s) 308, 958, 1111, 1230
Bsp143I GATC 4 cut(s) 12, 249, 625, 1369
Bsp19I CCATGG 1 cut(s) 1029
BspACI CCGC 5 cut(s) 177, 371, 656, 1223, 1560
BspANI GGCC 2 cut(s) 420, 1028
BspFNI CGCG 1 cut(s) 179
BspHI TCATGA 1 cut(s) 1522
BspLI GGNNCC 4 cut(s) 39, 61, 1068, 1229
BspMAI CTGCAG 2 cut(s) 1313, 1496
BspPI GGATC 2 cut(s) 257, 1364
BspT104I TTCGAA 1 cut(s) 1431
BspT107I GGYRCC 1 cut(s) 37
BspTI CTTAAG 1 cut(s) 122
BsrBI CCGCTC 1 cut(s) 1223
BsrFI RCCGGY 3 cut(s) 40, 152, 1264
BsrI ACTGG 2 cut(s) 138, 1598
BssAI RCCGGY 3 cut(s) 40, 152, 1264
BssECI CCNNGG 4 cut(s) 289, 811, 1029, 1116
BssMI GATC 4 cut(s) 12, 249, 625, 1369
BssSI CACGAG 1 cut(s) 426
BssT1I CCWWGG 2 cut(s) 811, 1029
Bst2BI CACGAG 1 cut(s) 426
Bst4CI ACNGT 5 cut(s) 37, 172, 911, 1282, 1574
Bst6I CTCTTC 1 cut(s) 1428
BstAFI CTTAAG 1 cut(s) 122
BstBAI YACGTR 1 cut(s) 514
BstBI TTCGAA 1 cut(s) 1431
BstC8I GCNNGC 3 cut(s) 42, 181, 1309
BstDEI CTNAG 1 cut(s) 960
BstDSI CCRYGG 2 cut(s) 289, 1029
BstF5I GGATG 5 cut(s) 456, 564, 727, 1549, 1603
BstFNI CGCG 1 cut(s) 179
BstHHI GCGC 1 cut(s) 634
BstKTI GATC 4 cut(s) 15, 252, 628, 1372
BstMAI GTCTC 4 cut(s) 9, 146, 213, 1606
BstMBI GATC 4 cut(s) 12, 249, 625, 1369
BstMWI GCNNNNNNNGC 2 cut(s) 46, 1343
BstNSI RCATGY 1 cut(s) 346
BstSCI CCNGG 1 cut(s) 1115
BstSFI CTRYAG 2 cut(s) 1309, 1492
BstUI CGCG 1 cut(s) 179
BstV1I GCAGC 2 cut(s) 1358, 1478
BstV2I GAAGAC 2 cut(s) 480, 1281
BstXI CCANNNNNNTGG 1 cut(s) 273
BsuI GTATCC 1 cut(s) 831
BsuRI GGCC 2 cut(s) 420, 1028
BtgI CCRYGG 2 cut(s) 289, 1029
BtgZI GCGATG 1 cut(s) 59
BtsCI GGATG 5 cut(s) 456, 564, 727, 1549, 1603
BtsIMutI CAGTG 1 cut(s) 1278
Cac8I GCNNGC 3 cut(s) 42, 181, 1309
CaiI CAGNNNCTG 1 cut(s) 640
CciI TCATGA 1 cut(s) 1522
CfoI GCGC 1 cut(s) 634
Cfr10I RCCGGY 3 cut(s) 40, 152, 1264
Cfr13I GGNCC 1 cut(s) 1026
CseI GACGC 1 cut(s) 195
Csp6I GTAC 6 cut(s) 108, 511, 808, 847, 907, 1124
CspAI ACCGGT 1 cut(s) 152
CviAII CATG 6 cut(s) 220, 343, 446, 842, 1030, 1523
CviQI GTAC 6 cut(s) 108, 511, 808, 847, 907, 1124
DdeI CTNAG 1 cut(s) 960
DpnI GATC 4 cut(s) 14, 251, 627, 1371
DpnII GATC 4 cut(s) 12, 249, 625, 1369
EaeI YGGCCR 1 cut(s) 418
Eam1104I CTCTTC 1 cut(s) 1428
EarI CTCTTC 1 cut(s) 1428
Ecl136II GAGCTC 1 cut(s) 306
Eco130I CCWWGG 2 cut(s) 811, 1029
Eco24I GRGCYC 2 cut(s) 308, 1230
Eco32I GATATC 1 cut(s) 1585
Eco53kI GAGCTC 1 cut(s) 306
EcoICRI GAGCTC 1 cut(s) 306
EcoRI GAATTC 3 cut(s) 586, 679, 982
EcoRV GATATC 1 cut(s) 1585
EcoT14I CCWWGG 2 cut(s) 811, 1029
EcoT38I GRGCYC 2 cut(s) 308, 1230
ErhI CCWWGG 2 cut(s) 811, 1029
Esp3I CGTCTC 1 cut(s) 213
FaeI CATG 6 cut(s) 223, 346, 449, 845, 1033, 1526
FalI AAGNNNNNCTT 2 cut(s) 453, 485
FaqI GGGAC 1 cut(s) 480
FatI CATG 6 cut(s) 219, 342, 445, 841, 1029, 1522
FauI CCCGC 1 cut(s) 1216
FauNDI CATATG 1 cut(s) 507
FbaI TGATCA 1 cut(s) 625
FblI GTMKAC 1 cut(s) 412
Fnu4HI GCNGC 4 cut(s) 371, 656, 1347, 1492
FokI GGATG 5 cut(s) 463, 571, 734, 1536, 1610
FriOI GRGCYC 2 cut(s) 308, 1230
Fsp4HI GCNGC 4 cut(s) 371, 656, 1347, 1492
FspBI CTAG 3 cut(s) 246, 1001, 1647
GlaI GCGC 1 cut(s) 633
GluI GCNGC 4 cut(s) 371, 656, 1347, 1492
GsaI CCCAGC 1 cut(s) 1217
HaeIII GGCC 2 cut(s) 420, 1028
HapII CCGG 6 cut(s) 27, 41, 69, 153, 1116, 1265
HgaI GACGC 1 cut(s) 195
HhaI GCGC 1 cut(s) 634
Hin1II CATG 6 cut(s) 223, 346, 449, 845, 1033, 1526
Hin6I GCGC 1 cut(s) 632
HinP1I GCGC 1 cut(s) 632
HindIII AAGCTT 2 cut(s) 402, 537
HinfI GANTC 7 cut(s) 479, 546, 787, 859, 991, 1014, 1073
HpaII CCGG 6 cut(s) 27, 41, 69, 153, 1116, 1265
HphI GGTGA 1 cut(s) 796
Hpy166II GTNNAC 3 cut(s) 413, 777, 1577
Hpy188I TCNGA 6 cut(s) 9, 86, 166, 217, 1045, 1148
Hpy188III TCNNGA 6 cut(s) 274, 314, 428, 740, 1373, 1523
Hpy8I GTNNAC 3 cut(s) 413, 777, 1577
Hpy99I CGWCG 1 cut(s) 13
HpyAV CCTTC 5 cut(s) 31, 205, 399, 926, 1456
HpyCH4III ACNGT 5 cut(s) 37, 172, 911, 1282, 1574
HpyCH4IV ACGT 2 cut(s) 513, 1382
HpyCH4V TGCA 5 cut(s) 505, 748, 924, 1311, 1494
HpyF10VI GCNNNNNNNGC 2 cut(s) 46, 1343
HpyF3I CTNAG 1 cut(s) 960
HpySE526I ACGT 2 cut(s) 513, 1382
Hsp92II CATG 6 cut(s) 223, 346, 449, 845, 1033, 1526
HspAI GCGC 1 cut(s) 632
KroI GCCGGC 1 cut(s) 40
KroNI GCCGGC 1 cut(s) 42
Ksp22I TGATCA 1 cut(s) 625
Kzo9I GATC 4 cut(s) 12, 249, 625, 1369
LmnI GCTCC 5 cut(s) 303, 815, 961, 1220, 1233
Lsp1109I GCAGC 2 cut(s) 1358, 1478
LweI GCATC 5 cut(s) 36, 712, 735, 1558, 1627
MaeI CTAG 3 cut(s) 246, 1001, 1647
MaeII ACGT 2 cut(s) 513, 1382
MaeIII GTNAC 4 cut(s) 31, 172, 514, 886
MalI GATC 4 cut(s) 14, 251, 627, 1371
MbiI CCGCTC 1 cut(s) 1223
MboI GATC 4 cut(s) 12, 249, 625, 1369
MboII GAAGA 7 cut(s) 345, 485, 1247, 1283, 1286, 1372, 1445
MhlI GDGCHC 4 cut(s) 308, 958, 1111, 1230
MlsI TGGCCA 1 cut(s) 420
MluNI TGGCCA 1 cut(s) 420
MlyI GAGTC 2 cut(s) 473, 796
MmeI TCCRAC 3 cut(s) 32, 708, 959
Mox20I TGGCCA 1 cut(s) 420
MroNI GCCGGC 1 cut(s) 40
MscI TGGCCA 1 cut(s) 420
MseI TTAA 9 cut(s) 123, 158, 459, 717, 1097, 1199, 1206, 1589, 1611
MslI CAYNNNNRTG 2 cut(s) 341, 902
Msp20I TGGCCA 1 cut(s) 420
MspCI CTTAAG 1 cut(s) 122
MspI CCGG 6 cut(s) 27, 41, 69, 153, 1116, 1265
MspR9I CCNGG 1 cut(s) 1117
Mva1269I GAATGC 1 cut(s) 802
MvnI CGCG 1 cut(s) 179
MwoI GCNNNNNNNGC 2 cut(s) 46, 1343
NaeI GCCGGC 1 cut(s) 42
NciI CCSGG 1 cut(s) 1117
NcoI CCATGG 1 cut(s) 1029
NdeI CATATG 1 cut(s) 507
NdeII GATC 4 cut(s) 12, 249, 625, 1369
NgoMIV GCCGGC 1 cut(s) 40
NlaIII CATG 6 cut(s) 223, 346, 449, 845, 1033, 1526
NlaIV GGNNCC 4 cut(s) 39, 61, 1068, 1229
NmuCI GTSAC 2 cut(s) 31, 514
NspI RCATGY 1 cut(s) 346
NspV TTCGAA 1 cut(s) 1431
PagI TCATGA 1 cut(s) 1522
PciI ACATGT 1 cut(s) 342
PcsI WCGNNNNNNNCGW 1 cut(s) 41
PctI GAATGC 1 cut(s) 802
PdiI GCCGGC 1 cut(s) 42
PfeI GAWTC 5 cut(s) 546, 859, 991, 1014, 1073
PinAI ACCGGT 1 cut(s) 152
PkrI GCNGC 4 cut(s) 372, 657, 1348, 1493
PleI GAGTC 2 cut(s) 473, 795
PpsI GAGTC 2 cut(s) 473, 795
Ppu21I YACGTR 1 cut(s) 514
PscI ACATGT 1 cut(s) 342
Psp124BI GAGCTC 1 cut(s) 308
PspFI CCCAGC 1 cut(s) 1213
PspN4I GGNNCC 4 cut(s) 39, 61, 1068, 1229
PspPI GGNCC 1 cut(s) 1026
PstI CTGCAG 2 cut(s) 1313, 1496
PstNI CAGNNNCTG 1 cut(s) 640
RsaI GTAC 6 cut(s) 109, 512, 809, 848, 908, 1125
RsaNI GTAC 6 cut(s) 108, 511, 808, 847, 907, 1124
RseI CAYNNNNRTG 2 cut(s) 341, 902
SacI GAGCTC 1 cut(s) 308
SaqAI TTAA 9 cut(s) 123, 158, 459, 717, 1097, 1199, 1206, 1589, 1611
SatI GCNGC 4 cut(s) 371, 656, 1347, 1492
Sau3AI GATC 4 cut(s) 12, 249, 625, 1369
Sau96I GGNCC 1 cut(s) 1026
SbfI CCTGCAGG 1 cut(s) 1313
SchI GAGTC 2 cut(s) 473, 796
ScrFI CCNGG 1 cut(s) 1117
SdaI CCTGCAGG 1 cut(s) 1313
SduI GDGCHC 4 cut(s) 308, 958, 1111, 1230
SfaNI GCATC 5 cut(s) 36, 712, 735, 1558, 1627
SfcI CTRYAG 2 cut(s) 1309, 1492
SfuI TTCGAA 1 cut(s) 1431
SmiMI CAYNNNNRTG 2 cut(s) 341, 902
SmlI CTYRAG 1 cut(s) 122
SmoI CTYRAG 1 cut(s) 122
Sse8387I CCTGCAGG 1 cut(s) 1313
SsiI CCGC 5 cut(s) 177, 371, 656, 1223, 1560
SspMI CTAG 3 cut(s) 246, 1001, 1647
SstI GAGCTC 1 cut(s) 308
StyD4I CCNGG 1 cut(s) 1115
StyI CCWWGG 2 cut(s) 811, 1029
TaaI ACNGT 5 cut(s) 37, 172, 911, 1282, 1574
TaiI ACGT 2 cut(s) 516, 1385
TatI WGTACW 3 cut(s) 846, 906, 1123
TauI GCSGC 2 cut(s) 373, 658
TfiI GAWTC 5 cut(s) 546, 859, 991, 1014, 1073
Tru1I TTAA 9 cut(s) 123, 158, 459, 717, 1097, 1199, 1206, 1589, 1611
Tru9I TTAA 9 cut(s) 123, 158, 459, 717, 1097, 1199, 1206, 1589, 1611
TscAI CASTG 1 cut(s) 1285
TseFI GTSAC 2 cut(s) 31, 514
TseI GCWGC 2 cut(s) 1346, 1491
Tsp45I GTSAC 2 cut(s) 31, 514
TspDTI ATGAA 9 cut(s) 236, 325, 663, 1075, 1152, 1169, 1392, 1475, 1511
TspGWI ACGGA 6 cut(s) 201, 278, 316, 348, 505, 1026
TspRI CASTG 1 cut(s) 1285
Vha464I CTTAAG 1 cut(s) 122
XapI RAATTY 4 cut(s) 586, 679, 982, 1139
XceI RCATGY 1 cut(s) 346
XcmI CCANNNNNNNNNTGG 1 cut(s) 428
XmiI GTMKAC 1 cut(s) 412
XspI CTAG 3 cut(s) 246, 1001, 1647
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.