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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G43990 |
| fragaria_vesca | FvH4_1g00220 |
| malus_domestica | MD00G1086900.v1.1 MD15G1142800.v1.1 |
| prunus_persica | Prupe.7G270200_v2.0.a1 Prupe.7G270200_v2.0.a1 |
| pyrus_communis | pycom15g12890 pycom290g00170 |
| rosa_chinensis | RchiOBHm_Chr2g0084511 |
| rosa_laevigata | RLG00000015623 |
| rosa_multiflora | Rmu_co8107158.1_g000001 Rmu_sc0009647.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00156000 |
| rosa_rugosa | Rorug01G0454600 |
| rosa_samantha | Rh2AG002700 Rh2BG002300 Rh2CG002800 Rh2DG002800 |
| rosa_wichuraiana | Rw2G000240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 30 |
| AccI | GTMKAC | 2 cut(s) | 286, 661 |
| AciI | CCGC | 2 cut(s) | 65, 974 |
| AclWI | GGATC | 7 cut(s) | 622, 748, 1137, 1205, 1304, 1519, 1532 |
| AcoI | YGGCCR | 2 cut(s) | 1084, 1578 |
| AcsI | RAATTY | 3 cut(s) | 41, 908, 1748 |
| AcuI | CTGAAG | 2 cut(s) | 437, 1260 |
| AfaI | GTAC | 2 cut(s) | 133, 589 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 449 |
| AflIII | ACRYGT | 1 cut(s) | 1298 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1339 |
| AjnI | CCWGG | 1 cut(s) | 1527 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 909, 941, 1391, 1423 |
| Alw21I | GWGCWC | 1 cut(s) | 990 |
| Alw26I | GTCTC | 8 cut(s) | 57, 426, 451, 726, 1085, 1178, 1326, 1347 |
| Alw44I | GTGCAC | 1 cut(s) | 986 |
| AlwI | GGATC | 7 cut(s) | 622, 748, 1137, 1205, 1304, 1519, 1532 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1745 |
| AoxI | GGCC | 2 cut(s) | 1084, 1578 |
| ApaLI | GTGCAC | 1 cut(s) | 986 |
| ApeKI | GCWGC | 4 cut(s) | 150, 788, 1778, 1820 |
| ApoI | RAATTY | 3 cut(s) | 41, 908, 1748 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1403, 1435 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 13, 1159, 1227, 1806 |
| AspLEI | GCGC | 1 cut(s) | 31 |
| AsuHPI | GGTGA | 6 cut(s) | 121, 203, 869, 1241, 1280, 1509 |
| AxyI | CCTNAGG | 1 cut(s) | 837 |
| BaeGI | GKGCMC | 1 cut(s) | 990 |
| BalI | TGGCCA | 2 cut(s) | 1086, 1580 |
| BamHI | GGATCC | 1 cut(s) | 1524 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1108, 1140 |
| BbsI | GAAGAC | 1 cut(s) | 237 |
| Bbv12I | GWGCWC | 1 cut(s) | 990 |
| BbvI | GCAGC | 4 cut(s) | 162, 775, 1765, 1807 |
| BccI | CCATC | 5 cut(s) | 650, 1040, 1259, 1835, 1873 |
| BceAI | ACGGC | 1 cut(s) | 1536 |
| BciT130I | CCWGG | 1 cut(s) | 1529 |
| BciVI | GTATCC | 1 cut(s) | 837 |
| BcoDI | GTCTC | 8 cut(s) | 57, 426, 451, 726, 1085, 1178, 1326, 1347 |
| BfaI | CTAG | 2 cut(s) | 525, 1307 |
| BfmI | CTRYAG | 1 cut(s) | 1821 |
| BfuI | GTATCC | 1 cut(s) | 837 |
| BisI | GCNGC | 5 cut(s) | 65, 151, 789, 1779, 1821 |
| BlsI | GCNGC | 5 cut(s) | 66, 152, 790, 1780, 1822 |
| BmcAI | AGTACT | 1 cut(s) | 589 |
| Bme1390I | CCNGG | 1 cut(s) | 1529 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1339 |
| BmiI | GGNNCC | 2 cut(s) | 1526, 1545 |
| BmrFI | CCNGG | 1 cut(s) | 1529 |
| BmsI | GCATC | 4 cut(s) | 206, 419, 770, 967 |
| BpiI | GAAGAC | 1 cut(s) | 237 |
| BpmI | CTGGAG | 1 cut(s) | 708 |
| BpuEI | CTTGAG | 3 cut(s) | 389, 1387, 1422 |
| BsaI | GGTCTC | 1 cut(s) | 451 |
| BsaJI | CCNNGG | 2 cut(s) | 1167, 1520 |
| BsaWI | WCCGGW | 4 cut(s) | 106, 188, 325, 484 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 365, 395, 1627, 1657 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 449 |
| Bse118I | RCCGGY | 1 cut(s) | 1508 |
| Bse1I | ACTGG | 4 cut(s) | 290, 616, 995, 1665 |
| Bse21I | CCTNAGG | 1 cut(s) | 837 |
| Bse3DI | GCAATG | 1 cut(s) | 169 |
| BseBI | CCWGG | 1 cut(s) | 1529 |
| BseDI | CCNNGG | 2 cut(s) | 1167, 1520 |
| BseGI | GGATG | 4 cut(s) | 197, 982, 1645, 1884 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 449 |
| BseMI | GCAATG | 1 cut(s) | 169 |
| BseMII | CTCAG | 9 cut(s) | 62, 68, 390, 437, 596, 819, 1070, 1308, 1854 |
| BseNI | ACTGG | 4 cut(s) | 290, 616, 995, 1665 |
| BseRI | GAGGAG | 2 cut(s) | 386, 1028 |
| BseSI | GKGCMC | 1 cut(s) | 990 |
| BseXI | GCAGC | 4 cut(s) | 162, 775, 1765, 1807 |
| BseYI | CCCAGC | 1 cut(s) | 1363 |
| BshFI | GGCC | 2 cut(s) | 1086, 1580 |
| BsiHKAI | GWGCWC | 1 cut(s) | 990 |
| BsiSI | CCGG | 6 cut(s) | 68, 107, 189, 326, 485, 1509 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 449 |
| BsmAI | GTCTC | 8 cut(s) | 57, 426, 451, 726, 1085, 1178, 1326, 1347 |
| BsmBI | CGTCTC | 1 cut(s) | 1347 |
| BsmI | GAATGC | 1 cut(s) | 1280 |
| BsnI | GGCC | 2 cut(s) | 1086, 1580 |
| Bso31I | GGTCTC | 1 cut(s) | 451 |
| Bsp1286I | GDGCHC | 1 cut(s) | 990 |
| Bsp143I | GATC | 9 cut(s) | 296, 614, 740, 1111, 1129, 1197, 1309, 1524, 1600 |
| Bsp19I | CCATGG | 1 cut(s) | 1167 |
| BspACI | CCGC | 2 cut(s) | 65, 974 |
| BspANI | GGCC | 2 cut(s) | 1086, 1580 |
| BspCNI | CTCAG | 9 cut(s) | 61, 67, 391, 436, 595, 818, 1069, 1309, 1855 |
| BspLI | GGNNCC | 2 cut(s) | 1526, 1545 |
| BspMAI | CTGCAG | 1 cut(s) | 1825 |
| BspPI | GGATC | 7 cut(s) | 622, 748, 1137, 1205, 1304, 1519, 1532 |
| BspTNI | GGTCTC | 1 cut(s) | 451 |
| BsrDI | GCAATG | 1 cut(s) | 169 |
| BsrFI | RCCGGY | 1 cut(s) | 1508 |
| BsrI | ACTGG | 4 cut(s) | 290, 616, 995, 1665 |
| BssAI | RCCGGY | 1 cut(s) | 1508 |
| BssECI | CCNNGG | 2 cut(s) | 1167, 1520 |
| BssMI | GATC | 9 cut(s) | 296, 614, 740, 1111, 1129, 1197, 1309, 1524, 1600 |
| BssT1I | CCWWGG | 2 cut(s) | 1167, 1520 |
| Bst2UI | CCWGG | 1 cut(s) | 1529 |
| Bst4CI | ACNGT | 6 cut(s) | 206, 575, 677, 735, 853, 1611 |
| Bst6I | CTCTTC | 2 cut(s) | 632, 1792 |
| BstC8I | GCNNGC | 2 cut(s) | 833, 972 |
| BstDSI | CCRYGG | 1 cut(s) | 1167 |
| BstF5I | GGATG | 4 cut(s) | 197, 982, 1645, 1884 |
| BstHHI | GCGC | 1 cut(s) | 31 |
| BstKTI | GATC | 9 cut(s) | 299, 617, 743, 1114, 1132, 1200, 1312, 1527, 1603 |
| BstMAI | GTCTC | 8 cut(s) | 57, 426, 451, 726, 1085, 1178, 1326, 1347 |
| BstMBI | GATC | 9 cut(s) | 296, 614, 740, 1111, 1129, 1197, 1309, 1524, 1600 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 64, 147, 159, 785 |
| BstNI | CCWGG | 1 cut(s) | 1529 |
| BstNSI | RCATGY | 3 cut(s) | 1302, 1714, 1887 |
| BstSCI | CCNGG | 1 cut(s) | 1527 |
| BstSFI | CTRYAG | 1 cut(s) | 1821 |
| BstSLI | GKGCMC | 1 cut(s) | 990 |
| BstV1I | GCAGC | 4 cut(s) | 162, 775, 1765, 1807 |
| BstV2I | GAAGAC | 1 cut(s) | 237 |
| BstX2I | RGATCY | 4 cut(s) | 614, 1129, 1309, 1524 |
| BstYI | RGATCY | 4 cut(s) | 614, 1129, 1309, 1524 |
| Bsu36I | CCTNAGG | 1 cut(s) | 837 |
| BsuI | GTATCC | 1 cut(s) | 837 |
| BsuRI | GGCC | 2 cut(s) | 1086, 1580 |
| BtgI | CCRYGG | 1 cut(s) | 1167 |
| BtsCI | GGATG | 4 cut(s) | 197, 982, 1645, 1884 |
| BtsIMutI | CAGTG | 8 cut(s) | 297, 740, 849, 988, 990, 1484, 1658, 1836 |
| Cac8I | GCNNGC | 2 cut(s) | 833, 972 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1745 |
| CfoI | GCGC | 1 cut(s) | 31 |
| Cfr10I | RCCGGY | 1 cut(s) | 1508 |
| CseI | GACGC | 1 cut(s) | 969 |
| Csp6I | GTAC | 2 cut(s) | 132, 588 |
| CviQI | GTAC | 2 cut(s) | 132, 588 |
| DpnI | GATC | 9 cut(s) | 298, 616, 742, 1113, 1131, 1199, 1311, 1526, 1602 |
| DpnII | GATC | 9 cut(s) | 296, 614, 740, 1111, 1129, 1197, 1309, 1524, 1600 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1339 |
| EaeI | YGGCCR | 2 cut(s) | 1084, 1578 |
| Eam1104I | CTCTTC | 2 cut(s) | 632, 1792 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1339 |
| EarI | CTCTTC | 2 cut(s) | 632, 1792 |
| Eco130I | CCWWGG | 2 cut(s) | 1167, 1520 |
| Eco31I | GGTCTC | 1 cut(s) | 451 |
| Eco57I | CTGAAG | 2 cut(s) | 437, 1260 |
| Eco81I | CCTNAGG | 1 cut(s) | 837 |
| EcoRII | CCWGG | 1 cut(s) | 1527 |
| EcoT14I | CCWWGG | 2 cut(s) | 1167, 1520 |
| ErhI | CCWWGG | 2 cut(s) | 1167, 1520 |
| Esp3I | CGTCTC | 1 cut(s) | 1347 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1765, 1797 |
| FblI | GTMKAC | 2 cut(s) | 286, 661 |
| Fnu4HI | GCNGC | 5 cut(s) | 65, 151, 789, 1779, 1821 |
| FokI | GGATG | 4 cut(s) | 184, 989, 1632, 1891 |
| Fsp4HI | GCNGC | 5 cut(s) | 65, 151, 789, 1779, 1821 |
| FspBI | CTAG | 2 cut(s) | 525, 1307 |
| FspI | TGCGCA | 1 cut(s) | 30 |
| GlaI | GCGC | 1 cut(s) | 30 |
| GluI | GCNGC | 5 cut(s) | 65, 151, 789, 1779, 1821 |
| GsaI | CCCAGC | 1 cut(s) | 1367 |
| GsuI | CTGGAG | 1 cut(s) | 708 |
| HaeIII | GGCC | 2 cut(s) | 1086, 1580 |
| HapII | CCGG | 6 cut(s) | 68, 107, 189, 326, 485, 1509 |
| HgaI | GACGC | 1 cut(s) | 969 |
| HhaI | GCGC | 1 cut(s) | 31 |
| Hin6I | GCGC | 1 cut(s) | 29 |
| HinP1I | GCGC | 1 cut(s) | 29 |
| HincII | GTYRAC | 1 cut(s) | 1630 |
| HindII | GTYRAC | 1 cut(s) | 1630 |
| HindIII | AAGCTT | 5 cut(s) | 536, 711, 777, 1272, 1405 |
| HpaII | CCGG | 6 cut(s) | 68, 107, 189, 326, 485, 1509 |
| HphI | GGTGA | 6 cut(s) | 121, 203, 869, 1241, 1280, 1509 |
| Hpy166II | GTNNAC | 6 cut(s) | 112, 287, 338, 662, 988, 1630 |
| Hpy188III | TCNNGA | 6 cut(s) | 144, 368, 450, 525, 689, 725 |
| Hpy8I | GTNNAC | 6 cut(s) | 112, 287, 338, 662, 988, 1630 |
| HpyAV | CCTTC | 6 cut(s) | 627, 911, 1024, 1107, 1188, 1323 |
| HpyCH4III | ACNGT | 6 cut(s) | 206, 575, 677, 735, 853, 1611 |
| HpyCH4V | TGCA | 6 cut(s) | 432, 761, 831, 988, 1137, 1823 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 64, 147, 159, 785 |
| HspAI | GCGC | 1 cut(s) | 29 |
| Kzo9I | GATC | 9 cut(s) | 296, 614, 740, 1111, 1129, 1197, 1309, 1524, 1600 |
| LmnI | GCTCC | 2 cut(s) | 328, 1543 |
| Lsp1109I | GCAGC | 4 cut(s) | 162, 775, 1765, 1807 |
| LweI | GCATC | 4 cut(s) | 206, 419, 770, 967 |
| MaeI | CTAG | 2 cut(s) | 525, 1307 |
| MaeIII | GTNAC | 4 cut(s) | 209, 1515, 1654, 1886 |
| MalI | GATC | 9 cut(s) | 298, 616, 742, 1113, 1131, 1199, 1311, 1526, 1602 |
| MboI | GATC | 9 cut(s) | 296, 614, 740, 1111, 1129, 1197, 1309, 1524, 1600 |
| MflI | RGATCY | 4 cut(s) | 614, 1129, 1309, 1524 |
| MhlI | GDGCHC | 1 cut(s) | 990 |
| MlsI | TGGCCA | 2 cut(s) | 1086, 1580 |
| MluNI | TGGCCA | 2 cut(s) | 1086, 1580 |
| MlyI | GAGTC | 3 cut(s) | 1087, 1419, 1835 |
| MmeI | TCCRAC | 2 cut(s) | 225, 1422 |
| Mox20I | TGGCCA | 2 cut(s) | 1086, 1580 |
| MroXI | GAANNNNTTC | 4 cut(s) | 13, 1159, 1227, 1806 |
| MscI | TGGCCA | 2 cut(s) | 1086, 1580 |
| MseI | TTAA | 5 cut(s) | 344, 378, 534, 540, 1897 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1650 |
| Msp20I | TGGCCA | 2 cut(s) | 1086, 1580 |
| MspI | CCGG | 6 cut(s) | 68, 107, 189, 326, 485, 1509 |
| MspR9I | CCNGG | 1 cut(s) | 1529 |
| Mva1269I | GAATGC | 1 cut(s) | 1280 |
| MvaI | CCWGG | 1 cut(s) | 1529 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 64, 147, 159, 785 |
| NcoI | CCATGG | 1 cut(s) | 1167 |
| NdeII | GATC | 9 cut(s) | 296, 614, 740, 1111, 1129, 1197, 1309, 1524, 1600 |
| NlaIV | GGNNCC | 2 cut(s) | 1526, 1545 |
| NmeAIII | GCCGAG | 1 cut(s) | 1572 |
| NmuCI | GTSAC | 2 cut(s) | 209, 1515 |
| NsbI | TGCGCA | 1 cut(s) | 30 |
| NspI | RCATGY | 3 cut(s) | 1302, 1714, 1887 |
| PciI | ACATGT | 1 cut(s) | 1298 |
| PctI | GAATGC | 1 cut(s) | 1280 |
| PdmI | GAANNNNTTC | 4 cut(s) | 13, 1159, 1227, 1806 |
| PfeI | GAWTC | 8 cut(s) | 4, 751, 899, 1242, 1394, 1481, 1592, 1868 |
| PkrI | GCNGC | 5 cut(s) | 66, 152, 790, 1780, 1822 |
| PleI | GAGTC | 3 cut(s) | 1087, 1419, 1834 |
| PpsI | GAGTC | 3 cut(s) | 1087, 1419, 1834 |
| PscI | ACATGT | 1 cut(s) | 1298 |
| Psp6I | CCWGG | 1 cut(s) | 1527 |
| PspFI | CCCAGC | 1 cut(s) | 1363 |
| PspGI | CCWGG | 1 cut(s) | 1527 |
| PspN4I | GGNNCC | 2 cut(s) | 1526, 1545 |
| PstI | CTGCAG | 1 cut(s) | 1825 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1745 |
| PsuI | RGATCY | 4 cut(s) | 614, 1129, 1309, 1524 |
| RsaI | GTAC | 2 cut(s) | 133, 589 |
| RsaNI | GTAC | 2 cut(s) | 132, 588 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1650 |
| SaqAI | TTAA | 5 cut(s) | 344, 378, 534, 540, 1897 |
| SatI | GCNGC | 5 cut(s) | 65, 151, 789, 1779, 1821 |
| Sau3AI | GATC | 9 cut(s) | 296, 614, 740, 1111, 1129, 1197, 1309, 1524, 1600 |
| ScaI | AGTACT | 1 cut(s) | 589 |
| SchI | GAGTC | 3 cut(s) | 1087, 1419, 1835 |
| ScrFI | CCNGG | 1 cut(s) | 1529 |
| SduI | GDGCHC | 1 cut(s) | 990 |
| SfaNI | GCATC | 4 cut(s) | 206, 419, 770, 967 |
| SfcI | CTRYAG | 1 cut(s) | 1821 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1650 |
| SmlI | CTYRAG | 3 cut(s) | 368, 1402, 1437 |
| SmoI | CTYRAG | 3 cut(s) | 368, 1402, 1437 |
| SsiI | CCGC | 2 cut(s) | 65, 974 |
| SspMI | CTAG | 2 cut(s) | 525, 1307 |
| StyD4I | CCNGG | 1 cut(s) | 1527 |
| StyI | CCWWGG | 2 cut(s) | 1167, 1520 |
| TaaI | ACNGT | 6 cut(s) | 206, 575, 677, 735, 853, 1611 |
| TaqI | TCGA | 4 cut(s) | 7, 1284, 1410, 1569 |
| TatI | WGTACW | 2 cut(s) | 131, 587 |
| TauI | GCSGC | 1 cut(s) | 67 |
| TfiI | GAWTC | 8 cut(s) | 4, 751, 899, 1242, 1394, 1481, 1592, 1868 |
| Tru1I | TTAA | 5 cut(s) | 344, 378, 534, 540, 1897 |
| Tru9I | TTAA | 5 cut(s) | 344, 378, 534, 540, 1897 |
| TscAI | CASTG | 8 cut(s) | 297, 740, 856, 990, 995, 1491, 1665, 1843 |
| TseFI | GTSAC | 2 cut(s) | 209, 1515 |
| TseI | GCWGC | 4 cut(s) | 150, 788, 1778, 1820 |
| Tsp45I | GTSAC | 2 cut(s) | 209, 1515 |
| TspRI | CASTG | 8 cut(s) | 297, 740, 856, 990, 995, 1491, 1665, 1843 |
| VneI | GTGCAC | 1 cut(s) | 986 |
| XapI | RAATTY | 3 cut(s) | 41, 908, 1748 |
| XbaI | TCTAGA | 1 cut(s) | 524 |
| XceI | RCATGY | 3 cut(s) | 1302, 1714, 1887 |
| XmiI | GTMKAC | 2 cut(s) | 286, 661 |
| XmnI | GAANNNNTTC | 4 cut(s) | 13, 1159, 1227, 1806 |
| XspI | CTAG | 2 cut(s) | 525, 1307 |
| ZrmI | AGTACT | 1 cut(s) | 589 |