MD15G1142800.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0012415
Physical Location & Seq
Reverse (-)
10557495 .. 10559486
1992 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1142800.v1.1.491

Sequence Viewer

Length: 1992 bp
ATGAACCGATCGTTGTCGTCAAAGCTCGCCAAGAAAGCCACTCCGGCCCCGCCAATGGCGACGGCGAACAAGAAGAAGAAGCAAAAGGAGCAGAGCCGTCGAGATCCACTACGGGATCTCAATGCCGTCACCGTTGGCACTAGCAACACTGGCAGCGACGCTTCTTCTTCAATCTCGGTCGAAGCCCCGCGAGGTTGCCTCAGGTTCCTTCTCTCTCATTCTTCTTCCTCTAATTCAAAAACCCCTCTTTACACACCTAAAACTCTCTCCAAAACCCCTAAATCAGCTCCTGCTGTAAGGCCTACAAGACCATCAAAATCCAAGGATAACCGTTCCAAATTCAATGCTTTGGAAAACCCAGAGAAACCCACCTCACGAAATGCAAGTAAATCTAAGAATAATTCTTCTAGAAGTGGACCAAAGTCGAAAACTTGTTCAGTTTCAAAATCAAATGGAAATTCCCTGAGTAAGTTAGAATCTGGGTCTGAGGTGGAAGGTAGAATTGTAAGGGTGGTGGGCAATGCAGGTCAGCCCACTGAGCTCAAATCAGATGGTATTGATGGAAATTTTACTCCTTTGAGTAAGATACCGACTGGGTTGGGTTTGGACTCCAAGGCTGATAAGGATGAGGATGTGCTCGAGAATTCTGACAAATCTAATAGTAGAACCCCACCAGTTCAGGCCTCCGTATCTCCAGAGATACAATGCGGATCATCTGTGGTGTCCACGAGCAAGCTTGCTTGTTATTCTGCTGGTCATGTCCTTTCAGGGATCACTGACAAGAGGAAGTGCAGAGCTAAAGGAATTCTCAGTGTAGGACAGAATGATTCGGGCTTCAGTAAAGGGAAGGCTTTAGGCAGCTTTGAGGATGATGCCGACGACGCAGATGATGAAGGTGATGGTCATGTTGATGGAACTGGCAAAGGGGTTGTTGGCAATCTGGATGCTTGGGTTGTTCCTTTACCTACTGAAGCTTCAATGCATTGGCTTTTGTCACCGTGTGATGAAGGGGATGAGGATCACAAGGAGCATTCCGATAATAGCTTACAGAATTCTGTAGGTTCCGTGAATCTTTATTCTCCATTTTCAACCTCAGGTCGTCATGGATTTTCTTCAGATGTATGTGAAAAAACTAACACGGGAAGTACTACTAATTGTAGCAGGAGGAGAACTCCAATTTCTCCTAGTTTTCATGAAGTTCTGGAGCCCGTAAATGAGCATGTTGGTGTTTTGGCTTCTCCACATTGCACGCCTTGTTGTGAGGCTGTAACCTTGGACGAGGAGAGAAAACACCACTATGACTATGACGGTGAGACTTCTCCATTTTCTATGTTTTCACTGGACAGTGGCAATGTTATCCGTACTCCTCTATCAGGCTCGAGTATAGAAAATCATAGGAAACACTACTTTGATTCTGAACTGAGTTCAGTGGCTGAAGCTATTCAGATGGCAAGCTTGTCCCCGGAGACGAACAGTCATGCACTGATTGAGGATCAGATTGAATCCAGTTTCCAGTTTGAATGTCTAACCACCGCTTGCGGTTCAATCAGTCAATTGCATAAAGTTTTGGATGATCGCGCTTCCTGGCTCTCCAACTCTACACTAGAGAATATATCACAATCGGAGATGAGGATATCATGGAGAGAAGGGTTAATGAGTCGTATCTACGATATGGATGAAGATGATTGCTGCAGATGTTTATCCGATGAAGAGGAAGATATTAATGGGTGCGGCAAAGATCCATTAAAAAAGGAAGAAGCAAGTCAAAGTCCTGAACTCAATGTCCAGGTAGGGGAAGAAGATGAGAATGTAACTTTTAAGTTGTGGACGGCAGAAGTTTTGGATGATGAAGGAGGCGGCATTCATCCTAAGTTGTCATCAAGAGTGTGTGCTACTGCTGAGTCGATAAGCACTGATGGCGGTGGGGGGTTGCTTGCTTCAGGGGATTCAGATTGGAGTCAGTGCTACAAGAATGAGCTGTTCAATGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

664

Amino Acids

71.28

Weight (kDa)

5.29

Isoelectric Point (pI)

50.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012415)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G43990
fragaria_vesca FvH4_1g00220
malus_domestica MD00G1086900.v1.1 MD15G1142800.v1.1
prunus_persica Prupe.7G270200_v2.0.a1 Prupe.7G270200_v2.0.a1
pyrus_communis pycom15g12890 pycom290g00170
rosa_chinensis RchiOBHm_Chr2g0084511
rosa_laevigata RLG00000015623
rosa_multiflora Rmu_co8107158.1_g000001 Rmu_sc0009647.1_g000004
rosa_roxburghii Rroxscaffold_2G00156000
rosa_rugosa Rorug01G0454600
rosa_samantha Rh2AG002700 Rh2BG002300 Rh2CG002800 Rh2DG002800
rosa_wichuraiana Rw2G000240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 515
AccII CGCG 2 cut(s) 190, 1578
AciI CCGC 8 cut(s) 50, 188, 708, 1533, 1539, 1731, 1857, 1920
AclWI GGATC 7 cut(s) 98, 123, 718, 779, 1026, 1500, 1733
AcsI RAATTY 6 cut(s) 338, 457, 565, 643, 804, 1051
AcuI CTGAAG 5 cut(s) 820, 990, 1098, 1455, 1923
AdeI CACNNNGTG 1 cut(s) 1001
AfaI GTAC 2 cut(s) 1147, 1363
AfiI CCNNNNNNNGG 3 cut(s) 55, 1373, 1792
AhdI GACNNNNNGTC 1 cut(s) 1473
AjnI CCWGG 2 cut(s) 1583, 1785
AloI GAACNNNNNNTCC 2 cut(s) 1767, 1799
Alw21I GWGCWC 2 cut(s) 543, 639
Alw26I GTCTC 2 cut(s) 1307, 1460
AlwI GGATC 7 cut(s) 98, 123, 718, 779, 1026, 1500, 1733
AlwNI CAGNNNCTG 2 cut(s) 290, 1433
Ama87I CYCGRG 2 cut(s) 638, 1378
AoxI GGCC 3 cut(s) 45, 299, 681
ApeKI GCWGC 3 cut(s) 153, 858, 1689
ApoI RAATTY 6 cut(s) 338, 457, 565, 643, 804, 1051
AseI ATTAAT 1 cut(s) 1722
Asp700I GAANNNNTTC 1 cut(s) 1440
AspLEI GCGC 1 cut(s) 1580
AspS9I GGNCC 2 cut(s) 46, 416
AsuC2I CCSGG 1 cut(s) 1463
AsuHPI GGTGA 4 cut(s) 121, 908, 987, 1322
AvaI CYCGRG 2 cut(s) 638, 1378
AvaII GGWCC 1 cut(s) 416
AxyI CCTNAGG 2 cut(s) 200, 1093
BanII GRGCYC 2 cut(s) 543, 1209
BauI CACGAG 1 cut(s) 727
Bbv12I GWGCWC 2 cut(s) 543, 639
BbvI GCAGC 3 cut(s) 165, 870, 1676
BccI CCATC 7 cut(s) 319, 545, 554, 893, 905, 1441, 1910
BceAI ACGGC 4 cut(s) 78, 81, 110, 1845
BcgI CGANNNNNNTGC 2 cut(s) 80, 114
BciT130I CCWGG 2 cut(s) 1585, 1787
BcnI CCSGG 1 cut(s) 1463
BcoDI GTCTC 2 cut(s) 1307, 1460
BfaI CTAG 4 cut(s) 141, 408, 1185, 1604
BfmI CTRYAG 2 cut(s) 1056, 1690
BfuAI ACCTGC 1 cut(s) 515
BglI GCCNNNNNGGC 1 cut(s) 44
BisI GCNGC 5 cut(s) 154, 859, 1690, 1732, 1858
BlsI GCNGC 5 cut(s) 155, 860, 1691, 1733, 1859
BmcAI AGTACT 1 cut(s) 1147
Bme1390I CCNGG 3 cut(s) 1463, 1585, 1787
Bme18I GGWCC 1 cut(s) 416
BmeRI GACNNNNNGTC 1 cut(s) 1473
BmeT110I CYCGRG 2 cut(s) 638, 1378
BmgT120I GGNCC 2 cut(s) 46, 416
BmiI GGNNCC 4 cut(s) 48, 206, 1063, 1206
BmrFI CCNGG 3 cut(s) 1463, 1585, 1787
BmrI ACTGGG 1 cut(s) 603
BmsI GCATC 2 cut(s) 862, 934
BmuI ACTGGG 1 cut(s) 603
BoxI GACNNNNGTC 1 cut(s) 421
BplI GAGNNNNNCTC 4 cut(s) 183, 215, 1156, 1188
BpmI CTGGAG 2 cut(s) 678, 1223
BpuMI CCSGG 1 cut(s) 1463
BsaBI GATNNNNATC 2 cut(s) 1017, 1699
BsaJI CCNNGG 4 cut(s) 321, 612, 1272, 1461
Bsc4I CCNNNNNNNGG 3 cut(s) 55, 1373, 1792
Bse1I ACTGG 7 cut(s) 154, 598, 674, 922, 1344, 1506, 1513
Bse21I CCTNAGG 2 cut(s) 200, 1093
Bse3DI GCAATG 3 cut(s) 526, 1243, 1357
Bse8I GATNNNNATC 2 cut(s) 1017, 1699
BseBI CCWGG 2 cut(s) 1585, 1787
BseDI CCNNGG 4 cut(s) 321, 612, 1272, 1461
BseGI GGATG 9 cut(s) 631, 637, 874, 949, 1018, 1576, 1681, 1849, 1864
BseJI GATNNNNATC 2 cut(s) 1017, 1699
BseLI CCNNNNNNNGG 3 cut(s) 55, 1373, 1792
BseMI GCAATG 3 cut(s) 526, 1243, 1357
BseMII CTCAG 8 cut(s) 214, 455, 477, 528, 823, 1107, 1412, 1890
BseNI ACTGG 7 cut(s) 154, 598, 674, 922, 1344, 1506, 1513
BseRI GAGGAG 3 cut(s) 1180, 1295, 1356
BseXI GCAGC 3 cut(s) 165, 870, 1676
BsgI GTGCAG 1 cut(s) 811
Bsh1236I CGCG 2 cut(s) 190, 1578
Bsh1285I CGRYCG 2 cut(s) 11, 180
BshFI GGCC 3 cut(s) 47, 301, 683
BsiEI CGRYCG 2 cut(s) 11, 180
BsiHKAI GWGCWC 2 cut(s) 543, 639
BsiHKCI CYCGRG 2 cut(s) 638, 1378
BsiSI CCGG 2 cut(s) 44, 1463
BslFI GGGAC 1 cut(s) 1444
BslI CCNNNNNNNGG 3 cut(s) 55, 1373, 1792
BsmAI GTCTC 2 cut(s) 1307, 1460
BsmBI CGTCTC 1 cut(s) 1460
BsmFI GGGAC 1 cut(s) 1444
BsmI GAATGC 2 cut(s) 1030, 1860
BsnI GGCC 3 cut(s) 47, 301, 683
BsoBI CYCGRG 2 cut(s) 638, 1378
Bsp1286I GDGCHC 3 cut(s) 543, 639, 1209
Bsp143I GATC 9 cut(s) 8, 103, 115, 710, 771, 1018, 1492, 1573, 1738
BspACI CCGC 8 cut(s) 50, 188, 708, 1533, 1539, 1731, 1857, 1920
BspANI GGCC 3 cut(s) 47, 301, 683
BspCNI CTCAG 8 cut(s) 213, 456, 478, 529, 822, 1106, 1413, 1891
BspFNI CGCG 2 cut(s) 190, 1578
BspHI TCATGA 1 cut(s) 1192
BspLI GGNNCC 4 cut(s) 48, 206, 1063, 1206
BspMAI CTGCAG 1 cut(s) 1694
BspMI ACCTGC 1 cut(s) 515
BspPI GGATC 7 cut(s) 98, 123, 718, 779, 1026, 1500, 1733
BsrDI GCAATG 3 cut(s) 526, 1243, 1357
BsrI ACTGG 7 cut(s) 154, 598, 674, 922, 1344, 1506, 1513
BssECI CCNNGG 4 cut(s) 321, 612, 1272, 1461
BssMI GATC 9 cut(s) 8, 103, 115, 710, 771, 1018, 1492, 1573, 1738
BssSI CACGAG 1 cut(s) 727
BssT1I CCWWGG 3 cut(s) 321, 612, 1272
Bst2BI CACGAG 1 cut(s) 727
Bst2UI CCWGG 2 cut(s) 1585, 1787
Bst4CI ACNGT 6 cut(s) 133, 332, 999, 1310, 1346, 1475
Bst6I CTCTTC 1 cut(s) 1704
BstC8I GCNNGC 7 cut(s) 27, 734, 738, 1250, 1453, 1537, 1935
BstENI CCTNNNNNAGG 1 cut(s) 1371
BstF5I GGATG 9 cut(s) 631, 637, 874, 949, 1018, 1576, 1681, 1849, 1864
BstFNI CGCG 2 cut(s) 190, 1578
BstHHI GCGC 1 cut(s) 1580
BstKTI GATC 9 cut(s) 11, 106, 118, 713, 774, 1021, 1495, 1576, 1741
BstMAI GTCTC 2 cut(s) 1307, 1460
BstMBI GATC 9 cut(s) 8, 103, 115, 710, 771, 1018, 1492, 1573, 1738
BstMCI CGRYCG 2 cut(s) 11, 180
BstMWI GCNNNNNNNGC 7 cut(s) 35, 44, 88, 150, 538, 881, 1917
BstNI CCWGG 2 cut(s) 1585, 1787
BstNSI RCATGY 1 cut(s) 1223
BstPAI GACNNNNGTC 1 cut(s) 421
BstSCI CCNGG 3 cut(s) 1461, 1583, 1785
BstSFI CTRYAG 2 cut(s) 1056, 1690
BstUI CGCG 2 cut(s) 190, 1578
BstV1I GCAGC 3 cut(s) 165, 870, 1676
BstX2I RGATCY 3 cut(s) 103, 115, 1738
BstYI RGATCY 3 cut(s) 103, 115, 1738
Bsu36I CCTNAGG 2 cut(s) 200, 1093
BsuRI GGCC 3 cut(s) 47, 301, 683
BtsCI GGATG 9 cut(s) 631, 637, 874, 949, 1018, 1576, 1681, 1849, 1864
BveI ACCTGC 1 cut(s) 515
Cac8I GCNNGC 7 cut(s) 27, 734, 738, 1250, 1453, 1537, 1935
CaiI CAGNNNCTG 2 cut(s) 290, 1433
CciI TCATGA 1 cut(s) 1192
CfoI GCGC 1 cut(s) 1580
Cfr13I GGNCC 2 cut(s) 46, 416
CseI GACGC 2 cut(s) 167, 890
Csp6I GTAC 2 cut(s) 1146, 1362
CviAII CATG 7 cut(s) 758, 905, 1103, 1193, 1220, 1478, 1638
CviQI GTAC 2 cut(s) 1146, 1362
DpnI GATC 9 cut(s) 10, 105, 117, 712, 773, 1020, 1494, 1575, 1740
DpnII GATC 9 cut(s) 8, 103, 115, 710, 771, 1018, 1492, 1573, 1738
DraIII CACNNNGTG 1 cut(s) 1001
DriI GACNNNNNGTC 1 cut(s) 1473
Eam1104I CTCTTC 1 cut(s) 1704
Eam1105I GACNNNNNGTC 1 cut(s) 1473
EarI CTCTTC 1 cut(s) 1704
Ecl136II GAGCTC 1 cut(s) 541
Eco130I CCWWGG 3 cut(s) 321, 612, 1272
Eco147I AGGCCT 2 cut(s) 301, 683
Eco24I GRGCYC 2 cut(s) 543, 1209
Eco32I GATATC 1 cut(s) 1635
Eco47I GGWCC 1 cut(s) 416
Eco53kI GAGCTC 1 cut(s) 541
Eco57I CTGAAG 5 cut(s) 820, 990, 1098, 1455, 1923
Eco81I CCTNAGG 2 cut(s) 200, 1093
Eco88I CYCGRG 2 cut(s) 638, 1378
EcoICRI GAGCTC 1 cut(s) 541
EcoNI CCTNNNNNAGG 1 cut(s) 1371
EcoRI GAATTC 3 cut(s) 643, 804, 1051
EcoRII CCWGG 2 cut(s) 1583, 1785
EcoRV GATATC 1 cut(s) 1635
EcoT14I CCWWGG 3 cut(s) 321, 612, 1272
EcoT22I ATGCAT 2 cut(s) 984, 1990
EcoT38I GRGCYC 2 cut(s) 543, 1209
ErhI CCWWGG 3 cut(s) 321, 612, 1272
Esp3I CGTCTC 1 cut(s) 1460
FaeI CATG 7 cut(s) 761, 908, 1106, 1196, 1223, 1481, 1641
FaqI GGGAC 1 cut(s) 1444
FatI CATG 7 cut(s) 757, 904, 1102, 1192, 1219, 1477, 1637
FauI CCCGC 2 cut(s) 57, 195
Fnu4HI GCNGC 5 cut(s) 154, 859, 1690, 1732, 1858
FokI GGATG 9 cut(s) 638, 644, 881, 956, 1025, 1583, 1688, 1851, 1856
FriOI GRGCYC 2 cut(s) 543, 1209
Fsp4HI GCNGC 5 cut(s) 154, 859, 1690, 1732, 1858
FspBI CTAG 4 cut(s) 141, 408, 1185, 1604
GlaI GCGC 1 cut(s) 1579
GluI GCNGC 5 cut(s) 154, 859, 1690, 1732, 1858
GsuI CTGGAG 2 cut(s) 678, 1223
HaeIII GGCC 3 cut(s) 47, 301, 683
HapII CCGG 2 cut(s) 44, 1463
HgaI GACGC 2 cut(s) 167, 890
HhaI GCGC 1 cut(s) 1580
Hin1II CATG 7 cut(s) 761, 908, 1106, 1196, 1223, 1481, 1641
Hin6I GCGC 1 cut(s) 1578
HinP1I GCGC 1 cut(s) 1578
HindIII AAGCTT 3 cut(s) 734, 972, 1453
HpaII CCGG 2 cut(s) 44, 1463
HphI GGTGA 4 cut(s) 121, 908, 987, 1322
Hpy166II GTNNAC 3 cut(s) 416, 726, 1827
Hpy8I GTNNAC 3 cut(s) 416, 726, 1827
Hpy99I CGWCG 5 cut(s) 64, 102, 161, 881, 884
HpyAV CCTTC 7 cut(s) 218, 488, 841, 887, 1001, 1640, 1844
HpyCH4III ACNGT 6 cut(s) 133, 332, 999, 1310, 1346, 1475
HpyCH4V TGCA 9 cut(s) 383, 524, 792, 982, 1248, 1481, 1558, 1692, 1988
HpyF10VI GCNNNNNNNGC 7 cut(s) 35, 44, 88, 150, 538, 881, 1917
Hsp92II CATG 7 cut(s) 761, 908, 1106, 1196, 1223, 1481, 1641
HspAI GCGC 1 cut(s) 1578
Kzo9I GATC 9 cut(s) 8, 103, 115, 710, 771, 1018, 1492, 1573, 1738
LmnI GCTCC 4 cut(s) 88, 292, 1027, 1204
Lsp1109I GCAGC 3 cut(s) 165, 870, 1676
LweI GCATC 2 cut(s) 862, 934
MaeI CTAG 4 cut(s) 141, 408, 1185, 1604
MaeIII GTNAC 4 cut(s) 127, 993, 1267, 1810
MalI GATC 9 cut(s) 10, 105, 117, 712, 773, 1020, 1494, 1575, 1740
MboI GATC 9 cut(s) 8, 103, 115, 710, 771, 1018, 1492, 1573, 1738
MfeI CAATTG 1 cut(s) 1553
MflI RGATCY 3 cut(s) 103, 115, 1738
MhlI GDGCHC 3 cut(s) 543, 639, 1209
MlyI GAGTC 4 cut(s) 602, 1666, 1910, 1966
MmeI TCCRAC 1 cut(s) 1617
Mph1103I ATGCAT 2 cut(s) 984, 1990
MroXI GAANNNNTTC 1 cut(s) 1440
MseI TTAA 4 cut(s) 1652, 1722, 1745, 1818
MslI CAYNNNNRTG 3 cut(s) 909, 1224, 1296
MspI CCGG 2 cut(s) 44, 1463
MspR9I CCNGG 3 cut(s) 1463, 1585, 1787
MunI CAATTG 1 cut(s) 1553
Mva1269I GAATGC 2 cut(s) 1030, 1860
MvaI CCWGG 2 cut(s) 1585, 1787
MvnI CGCG 2 cut(s) 190, 1578
MwoI GCNNNNNNNGC 7 cut(s) 35, 44, 88, 150, 538, 881, 1917
NciI CCSGG 1 cut(s) 1463
NdeII GATC 9 cut(s) 8, 103, 115, 710, 771, 1018, 1492, 1573, 1738
NlaIII CATG 7 cut(s) 761, 908, 1106, 1196, 1223, 1481, 1641
NlaIV GGNNCC 4 cut(s) 48, 206, 1063, 1206
NmuCI GTSAC 2 cut(s) 127, 993
NsiI ATGCAT 2 cut(s) 984, 1990
NspI RCATGY 1 cut(s) 1223
PaeR7I CTCGAG 2 cut(s) 638, 1378
PagI TCATGA 1 cut(s) 1192
PceI AGGCCT 2 cut(s) 301, 683
PctI GAATGC 2 cut(s) 1030, 1860
PdmI GAANNNNTTC 1 cut(s) 1440
PfeI GAWTC 6 cut(s) 476, 827, 1069, 1412, 1502, 1946
PkrI GCNGC 5 cut(s) 155, 860, 1691, 1733, 1859
Ple19I CGATCG 1 cut(s) 11
PleI GAGTC 4 cut(s) 602, 1665, 1909, 1965
PpsI GAGTC 4 cut(s) 602, 1665, 1909, 1965
PshAI GACNNNNGTC 1 cut(s) 421
PshBI ATTAAT 1 cut(s) 1722
Psp124BI GAGCTC 1 cut(s) 543
Psp6I CCWGG 2 cut(s) 1583, 1785
PspGI CCWGG 2 cut(s) 1583, 1785
PspN4I GGNNCC 4 cut(s) 48, 206, 1063, 1206
PspPI GGNCC 2 cut(s) 46, 416
PspXI VCTCGAGB 1 cut(s) 1378
PstI CTGCAG 1 cut(s) 1694
PstNI CAGNNNCTG 2 cut(s) 290, 1433
PsuI RGATCY 3 cut(s) 103, 115, 1738
PvuI CGATCG 1 cut(s) 11
RsaI GTAC 2 cut(s) 1147, 1363
RsaNI GTAC 2 cut(s) 1146, 1362
RseI CAYNNNNRTG 3 cut(s) 909, 1224, 1296
SacI GAGCTC 1 cut(s) 543
SaqAI TTAA 4 cut(s) 1652, 1722, 1745, 1818
SatI GCNGC 5 cut(s) 154, 859, 1690, 1732, 1858
Sau3AI GATC 9 cut(s) 8, 103, 115, 710, 771, 1018, 1492, 1573, 1738
Sau96I GGNCC 2 cut(s) 46, 416
ScaI AGTACT 1 cut(s) 1147
SchI GAGTC 4 cut(s) 602, 1666, 1910, 1966
ScrFI CCNGG 3 cut(s) 1463, 1585, 1787
SduI GDGCHC 3 cut(s) 543, 639, 1209
SfaNI GCATC 2 cut(s) 862, 934
SfcI CTRYAG 2 cut(s) 1056, 1690
Sfr274I CTCGAG 2 cut(s) 638, 1378
SinI GGWCC 1 cut(s) 416
SlaI CTCGAG 2 cut(s) 638, 1378
SmiMI CAYNNNNRTG 3 cut(s) 909, 1224, 1296
SmlI CTYRAG 2 cut(s) 638, 1378
SmoI CTYRAG 2 cut(s) 638, 1378
SseBI AGGCCT 2 cut(s) 301, 683
SsiI CCGC 8 cut(s) 50, 188, 708, 1533, 1539, 1731, 1857, 1920
SspMI CTAG 4 cut(s) 141, 408, 1185, 1604
SstI GAGCTC 1 cut(s) 543
StuI AGGCCT 2 cut(s) 301, 683
StyD4I CCNGG 3 cut(s) 1461, 1583, 1785
StyI CCWWGG 3 cut(s) 321, 612, 1272
TaaI ACNGT 6 cut(s) 133, 332, 999, 1310, 1346, 1475
TaqI TCGA 6 cut(s) 100, 180, 425, 639, 1379, 1904
TaqII GACCGA 1 cut(s) 166
TatI WGTACW 1 cut(s) 1145
TauI GCSGC 2 cut(s) 1734, 1860
TfiI GAWTC 6 cut(s) 476, 827, 1069, 1412, 1502, 1946
Tru1I TTAA 4 cut(s) 1652, 1722, 1745, 1818
Tru9I TTAA 4 cut(s) 1652, 1722, 1745, 1818
TseFI GTSAC 2 cut(s) 127, 993
TseI GCWGC 3 cut(s) 153, 858, 1689
Tsp45I GTSAC 2 cut(s) 127, 993
TspDTI ATGAA 9 cut(s) 17, 906, 1020, 1181, 1209, 1692, 1722, 1853, 1863
TspGWI ACGGA 3 cut(s) 676, 1054, 1349
VpaK11BI GGWCC 1 cut(s) 416
VspI ATTAAT 1 cut(s) 1722
XagI CCTNNNNNAGG 1 cut(s) 1371
XapI RAATTY 6 cut(s) 338, 457, 565, 643, 804, 1051
XbaI TCTAGA 1 cut(s) 407
XceI RCATGY 1 cut(s) 1223
XhoI CTCGAG 2 cut(s) 638, 1378
XmnI GAANNNNTTC 1 cut(s) 1440
XspI CTAG 4 cut(s) 141, 408, 1185, 1604
ZrmI AGTACT 1 cut(s) 1147
Zsp2I ATGCAT 2 cut(s) 984, 1990
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.