Rh2CG002800

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0012415
Physical Location & Seq
Forward (+)
247191 .. 249376
2186 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG002800.1

Sequence Viewer

Length: 1947 bp
ATGAACCGATCGTTGTCGTCAAAGGCGGCGAAGAAGCCGTCTCCGGCGCCGGCGAAGAAGAACAAAAAAGAGCAGAGCCTTCGAAACCCGTTGCAGGATCTCAATGTCATTAGTACTAGCAACCATGGGAGCGAGGCATCTTCTTCTTCAATGTCCATCGAAGCCCCACGAGGTTGCCTCAGGTTCTTTCTCTCTCACTCCTCTTCCTCTAATTTAAAAACCCCTATACGCACACGCACCAGCACCAGGCCTAAAACTCTCTCCAAAACCCCTAAATCAGCTCCTCTTGTGAGGCCTCCTAAGGACAACCCCTCCAATTCCAAATGCAATGTTTCCAAACACAACCCACAGAAATCAAAATTCAAGACTAGTTCTTCTTGCTTGTATCACTGGCAGCCTGGGAACCTACCTAGTTGTAGGAATGGGCTCAAGTTGAAAGCTTGTCCAGCTTTGAACTCGAAAGGCAAATCCTTTGAACAAAGGGTAGTTAATGATGATGATGTAGGTCAACCCAATGAGCTTAAGTCAGGTTCTAGTGATGATGCAACTTTTACTCCCTTATGTAAGATACCTACCGGGTTGGGTTTGGACCGCAAAGTCGATAACACTGAGGATGTGCAACAGAATTCTGACGACAAGAGTAATAGTACAACTCCTCCTGTTCAGGCCTCTGTGTCTCCAGAGATACAATTTGGATCCTCTGCCGTGTCGTCAGCCTCGCTGGCTTGTTATGCTGCAGGCCATGTTCTTTCGGGGGTCGCTGACAAGAGGAAGTGCAGACCTAGGGGAATTCTCAATGTAGGCGAGAATGATTCAGGCTTTGGGAAAGGGAAGGCTTTATGCAGTTTTGAGGAAGTGGTGGAGGATGACGATGCCACTGGCAAAGGAATGGTTGGAGATCCTGATGCTTCTATGGTTCCCTTACCTACTGAAGCTTCAATGCATTGGATTTTATCACCATGTAATGAGGAAGATGAGGATCACAAGGAGCATTCTGAATCTAGTTTTCAGAATCCTGCAGGGTCCCCCAATAGTGGTCGTGAATTCTCGTCAGATGTATGCTGCCATAACAACTATGAAAGCACTACTTGCCGTAGCAGGAGGAATACTTCCATTTCTCCTAGTGGAGTTCCTAAGTTTCAAGAATTTAACAATGAGCATGTGCCTGTTTTGTCTTCTCCGCCTTCTACACCTGGTTGTGAGGCTCTACCCTTGAAAGATGAAAGACAATACATTTATGAGTTTGATGCAGAGAATTCTCCGTTTTCTCTGGCTTCACTGAGTAGTGGGAATGTTATTCTTACACCTCAATCAGACTCTAGTGCAGATAGACATGCTGGCCTGTCCTGGTCTAATACAGACAACCATAGGAAACACTATGATTCTGAACTCAGTTCAGTGGCTGAAGCTATTCGGATGGCAAGCTTGTCTCCAAACCGTCATGAACTGATTGAGGATCAGATTGATTCAAGTTTCCAATTTGATTGTCTAACTACAACTTGTAATTCGATCAGTCGAATCCAGAAAATGTTGGATGATCAGGCTCCCTGGCATTCCAACTCCACTTTAGAGAATGTGTCACAATCCCAGCTGAGGATATCATGGAGAGAAGGGTTAATGAGCCGTATGCATGACATGGATGAATATGATTGCTGCAGATGTTTATCAGACGAAGAGGAAGATATCAATGGCTGCAGCAATGACCTTCCCAAAACGTCCTGTCTAAGTCCTGAAATCACCAACAATGTTGAGGCAGATCAGATTTTAACTGATACTTCCTGGTCTGCTGATATACTGGATGATGAACCAGGAGTTGCGGGAAAAGTTAAAGAAGACTTTCCTCCTCAATCATGTGCCGAGTCCATAAGCACTGATGGAGGCGGCCTGCTTGCTTCAGGGGATTCAGACTGGAATCTCTGCTACAAGAATGAGCTGTTCCATGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

648

Amino Acids

70.57

Weight (kDa)

5.29

Isoelectric Point (pI)

61.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012415)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G43990
fragaria_vesca FvH4_1g00220
malus_domestica MD00G1086900.v1.1 MD15G1142800.v1.1
prunus_persica Prupe.7G270200_v2.0.a1 Prupe.7G270200_v2.0.a1
pyrus_communis pycom15g12890 pycom290g00170
rosa_chinensis RchiOBHm_Chr2g0084511
rosa_laevigata RLG00000015623
rosa_multiflora Rmu_co8107158.1_g000001 Rmu_sc0009647.1_g000004
rosa_roxburghii Rroxscaffold_2G00156000
rosa_rugosa Rorug01G0454600
rosa_samantha Rh2AG002700 Rh2BG002300 Rh2CG002800 Rh2DG002800
rosa_wichuraiana Rw2G000240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 596
AccB1I GGYRCC 1 cut(s) 46
AciI CCGC 5 cut(s) 26, 592, 1181, 1817, 1881
AclWI GGATC 6 cut(s) 105, 690, 703, 893, 987, 1464
AcsI RAATTY 6 cut(s) 359, 625, 789, 1043, 1145, 1255
AcuI CTGAAG 3 cut(s) 951, 1425, 1878
AcyI GRCGYC 1 cut(s) 47
AfaI GTAC 2 cut(s) 115, 649
AfiI CCNNNNNNNGG 4 cut(s) 94, 246, 1034, 1593
AflII CTTAAG 1 cut(s) 521
AgsI TTSAA 9 cut(s) 150, 364, 436, 454, 476, 939, 1142, 1216, 1470
AhlI ACTAGT 1 cut(s) 368
AjnI CCWGG 7 cut(s) 245, 397, 1192, 1346, 1547, 1778, 1807
AluBI AGCT 9 cut(s) 281, 440, 449, 520, 935, 1409, 1425, 1591, 1933
AluI AGCT 9 cut(s) 281, 440, 449, 520, 935, 1409, 1425, 1591, 1933
Alw26I GTCTC 3 cut(s) 45, 681, 1434
AlwI GGATC 6 cut(s) 105, 690, 703, 893, 987, 1464
AlwNI CAGNNNCTG 1 cut(s) 1403
AoxI GGCC 6 cut(s) 248, 293, 666, 739, 1339, 1882
ApeKI GCWGC 6 cut(s) 394, 734, 1062, 1653, 1692, 1695
ApoI RAATTY 6 cut(s) 359, 625, 789, 1043, 1145, 1255
ArsI GACNNNNNNTTYG 2 cut(s) 23, 55
Asp700I GAANNNNTTC 2 cut(s) 1410, 1836
AspA2I CCTAGG 1 cut(s) 782
AspLEI GCGC 1 cut(s) 49
AspS9I GGNCC 2 cut(s) 589, 1023
AsuC2I CCSGG 1 cut(s) 577
AsuHPI GGTGA 2 cut(s) 948, 1729
AsuII TTCGAA 1 cut(s) 82
AvaII GGWCC 2 cut(s) 589, 1023
AvrII CCTAGG 1 cut(s) 782
AxyI CCTNAGG 2 cut(s) 179, 300
BamHI GGATCC 1 cut(s) 695
BanI GGYRCC 1 cut(s) 46
BanII GRGCYC 1 cut(s) 429
BauI CACGAG 1 cut(s) 168
BbsI GAAGAC 2 cut(s) 1167, 1839
BbvCI CCTCAGC 1 cut(s) 1592
BbvI GCAGC 6 cut(s) 406, 721, 1049, 1640, 1679, 1707
BccI CCATC 3 cut(s) 164, 1411, 1868
BceAI ACGGC 4 cut(s) 22, 689, 1077, 1608
BcgI CGANNNNNNTGC 2 cut(s) 62, 96
BciT130I CCWGG 7 cut(s) 247, 399, 1194, 1348, 1549, 1780, 1809
BclI TGATCA 1 cut(s) 1537
BcnI CCSGG 1 cut(s) 577
BcoDI GTCTC 3 cut(s) 45, 681, 1434
BcuI ACTAGT 1 cut(s) 368
BfaI CTAG 8 cut(s) 117, 369, 411, 534, 783, 1002, 1122, 1320
BfmI CTRYAG 4 cut(s) 735, 1017, 1654, 1693
BfoI RGCGCY 1 cut(s) 50
BfrI CTTAAG 1 cut(s) 521
BglI GCCNNNNNGGC 1 cut(s) 722
BisI GCNGC 8 cut(s) 27, 395, 735, 1063, 1654, 1693, 1696, 1882
BlnI CCTAGG 1 cut(s) 782
BlsI GCNGC 8 cut(s) 28, 396, 736, 1064, 1655, 1694, 1697, 1883
BmcAI AGTACT 1 cut(s) 115
Bme1390I CCNGG 8 cut(s) 247, 399, 577, 1194, 1348, 1549, 1780, 1809
Bme18I GGWCC 2 cut(s) 589, 1023
BmgT120I GGNCC 2 cut(s) 589, 1023
BmiI GGNNCC 7 cut(s) 48, 404, 697, 918, 1024, 1025, 1545
BmrFI CCNGG 8 cut(s) 247, 399, 577, 1194, 1348, 1549, 1780, 1809
BmsI GCATC 5 cut(s) 146, 532, 862, 895, 1237
BpiI GAAGAC 2 cut(s) 1167, 1839
BplI GAGNNNNNCTC 2 cut(s) 162, 194
BpmI CTGGAG 1 cut(s) 663
Bpu10I CCTNAGC 1 cut(s) 1592
Bpu14I TTCGAA 1 cut(s) 82
BpuEI CTTGAG 1 cut(s) 413
BpuMI CCSGG 1 cut(s) 577
BsaBI GATNNNNATC 2 cut(s) 978, 1663
BsaHI GRCGYC 1 cut(s) 47
BsaJI CCNNGG 4 cut(s) 124, 398, 782, 1547
BsaXI ACNNNNNCTCC 6 cut(s) 296, 326, 538, 568, 640, 670
Bsc4I CCNNNNNNNGG 4 cut(s) 94, 246, 1034, 1593
Bse118I RCCGGY 1 cut(s) 49
Bse1I ACTGG 4 cut(s) 395, 883, 1800, 1913
Bse21I CCTNAGG 2 cut(s) 179, 300
Bse3DI GCAATG 2 cut(s) 334, 1705
Bse8I GATNNNNATC 2 cut(s) 978, 1663
BseBI CCWGG 7 cut(s) 247, 399, 1194, 1348, 1549, 1780, 1809
BseDI CCNNGG 4 cut(s) 124, 398, 782, 1547
BseGI GGATG 6 cut(s) 619, 871, 1422, 1540, 1645, 1804
BseJI GATNNNNATC 2 cut(s) 978, 1663
BseLI CCNNNNNNNGG 4 cut(s) 94, 246, 1034, 1593
BseMI GCAATG 2 cut(s) 334, 1705
BseMII CTCAG 5 cut(s) 193, 600, 1271, 1405, 1583
BseNI ACTGG 4 cut(s) 395, 883, 1800, 1913
BseRI GAGGAG 4 cut(s) 190, 273, 645, 1833
BseXI GCAGC 6 cut(s) 406, 721, 1049, 1640, 1679, 1707
BseYI CCCAGC 1 cut(s) 1587
BsgI GTGCAG 2 cut(s) 796, 1344
Bsh1285I CGRYCG 1 cut(s) 11
BshFI GGCC 6 cut(s) 250, 295, 668, 741, 1341, 1884
BshNI GGYRCC 1 cut(s) 46
BsiEI CGRYCG 1 cut(s) 11
BsiSI CCGG 3 cut(s) 44, 50, 576
BslFI GGGAC 1 cut(s) 1009
BslI CCNNNNNNNGG 4 cut(s) 94, 246, 1034, 1593
BsmAI GTCTC 3 cut(s) 45, 681, 1434
BsmBI CGTCTC 1 cut(s) 45
BsmFI GGGAC 1 cut(s) 1009
BsmI GAATGC 2 cut(s) 991, 1552
BsnI GGCC 6 cut(s) 250, 295, 668, 741, 1341, 1884
Bsp119I TTCGAA 1 cut(s) 82
Bsp1286I GDGCHC 1 cut(s) 429
Bsp143I GATC 9 cut(s) 8, 97, 695, 898, 979, 1456, 1509, 1537, 1756
Bsp19I CCATGG 1 cut(s) 124
BspACI CCGC 5 cut(s) 26, 592, 1181, 1817, 1881
BspANI GGCC 6 cut(s) 250, 295, 668, 741, 1341, 1884
BspCNI CTCAG 5 cut(s) 192, 601, 1272, 1404, 1584
BspHI TCATGA 1 cut(s) 1441
BspLI GGNNCC 7 cut(s) 48, 404, 697, 918, 1024, 1025, 1545
BspMAI CTGCAG 4 cut(s) 739, 1021, 1658, 1697
BspPI GGATC 6 cut(s) 105, 690, 703, 893, 987, 1464
BspT104I TTCGAA 1 cut(s) 82
BspT107I GGYRCC 1 cut(s) 46
BspTI CTTAAG 1 cut(s) 521
BsrDI GCAATG 2 cut(s) 334, 1705
BsrFI RCCGGY 1 cut(s) 49
BsrI ACTGG 4 cut(s) 395, 883, 1800, 1913
BssAI RCCGGY 1 cut(s) 49
BssECI CCNNGG 4 cut(s) 124, 398, 782, 1547
BssMI GATC 9 cut(s) 8, 97, 695, 898, 979, 1456, 1509, 1537, 1756
BssNI GRCGYC 1 cut(s) 47
BssSI CACGAG 1 cut(s) 168
BssT1I CCWWGG 2 cut(s) 124, 782
Bst2BI CACGAG 1 cut(s) 168
Bst2UI CCWGG 7 cut(s) 247, 399, 1194, 1348, 1549, 1780, 1809
Bst4CI ACNGT 1 cut(s) 1439
Bst6I CTCTTC 2 cut(s) 208, 1668
BstACI GRCGYC 1 cut(s) 47
BstAFI CTTAAG 1 cut(s) 521
BstAPI GCANNNNNTGC 1 cut(s) 1089
BstBI TTCGAA 1 cut(s) 82
BstC8I GCNNGC 7 cut(s) 51, 723, 739, 1339, 1423, 1886, 1890
BstDEI CTNAG 8 cut(s) 179, 300, 609, 1134, 1280, 1391, 1592, 1724
BstDSI CCRYGG 1 cut(s) 124
BstF5I GGATG 6 cut(s) 619, 871, 1422, 1540, 1645, 1804
BstH2I RGCGCY 1 cut(s) 50
BstHHI GCGC 1 cut(s) 49
BstKTI GATC 9 cut(s) 11, 100, 698, 901, 982, 1459, 1512, 1540, 1759
BstMAI GTCTC 3 cut(s) 45, 681, 1434
BstMBI GATC 9 cut(s) 8, 97, 695, 898, 979, 1456, 1509, 1537, 1756
BstMCI CGRYCG 1 cut(s) 11
BstMWI GCNNNNNNNGC 4 cut(s) 446, 722, 731, 1089
BstNI CCWGG 7 cut(s) 247, 399, 1194, 1348, 1549, 1780, 1809
BstNSI RCATGY 2 cut(s) 1163, 1337
BstSCI CCNGG 8 cut(s) 245, 397, 575, 1192, 1346, 1547, 1778, 1807
BstSFI CTRYAG 4 cut(s) 735, 1017, 1654, 1693
BstV1I GCAGC 6 cut(s) 406, 721, 1049, 1640, 1679, 1707
BstV2I GAAGAC 2 cut(s) 1167, 1839
BstX2I RGATCY 3 cut(s) 97, 695, 898
BstYI RGATCY 3 cut(s) 97, 695, 898
Bsu36I CCTNAGG 2 cut(s) 179, 300
BsuRI GGCC 6 cut(s) 250, 295, 668, 741, 1341, 1884
BtgI CCRYGG 1 cut(s) 124
BtsCI GGATG 6 cut(s) 619, 871, 1422, 1540, 1645, 1804
BtsIMutI CAGTG 6 cut(s) 388, 606, 876, 1277, 1404, 1869
Cac8I GCNNGC 7 cut(s) 51, 723, 739, 1339, 1423, 1886, 1890
CaiI CAGNNNCTG 1 cut(s) 1403
CciI TCATGA 1 cut(s) 1441
CfoI GCGC 1 cut(s) 49
Cfr10I RCCGGY 1 cut(s) 49
Cfr13I GGNCC 2 cut(s) 589, 1023
CsiI ACCWGGT 1 cut(s) 1192
Csp6I GTAC 2 cut(s) 114, 648
CviQI GTAC 2 cut(s) 114, 648
DdeI CTNAG 8 cut(s) 179, 300, 609, 1134, 1280, 1391, 1592, 1724
DinI GGCGCC 1 cut(s) 48
DpnI GATC 9 cut(s) 10, 99, 697, 900, 981, 1458, 1511, 1539, 1758
DpnII GATC 9 cut(s) 8, 97, 695, 898, 979, 1456, 1509, 1537, 1756
DraI TTTAAA 1 cut(s) 216
DrdI GACNNNNNNGTC 1 cut(s) 596
DseDI GACNNNNNNGTC 1 cut(s) 596
Eam1104I CTCTTC 2 cut(s) 208, 1668
EarI CTCTTC 2 cut(s) 208, 1668
EciI GGCGGA 1 cut(s) 1170
Eco130I CCWWGG 2 cut(s) 124, 782
Eco147I AGGCCT 3 cut(s) 250, 295, 668
Eco24I GRGCYC 1 cut(s) 429
Eco32I GATATC 2 cut(s) 1599, 1684
Eco47I GGWCC 2 cut(s) 589, 1023
Eco57I CTGAAG 3 cut(s) 951, 1425, 1878
Eco81I CCTNAGG 2 cut(s) 179, 300
EcoO109I RGGNCCY 1 cut(s) 1023
EcoRI GAATTC 4 cut(s) 625, 789, 1043, 1255
EcoRII CCWGG 7 cut(s) 245, 397, 1192, 1346, 1547, 1778, 1807
EcoRV GATATC 2 cut(s) 1599, 1684
EcoT14I CCWWGG 2 cut(s) 124, 782
EcoT22I ATGCAT 2 cut(s) 945, 1632
EcoT38I GRGCYC 1 cut(s) 429
EgeI GGCGCC 1 cut(s) 48
EheI GGCGCC 1 cut(s) 48
ErhI CCWWGG 2 cut(s) 124, 782
Esp3I CGTCTC 1 cut(s) 45
FalI AAGNNNNNCTT 2 cut(s) 1072, 1104
FaqI GGGAC 1 cut(s) 1009
FauI CCCGC 1 cut(s) 1810
FbaI TGATCA 1 cut(s) 1537
Fnu4HI GCNGC 8 cut(s) 27, 395, 735, 1063, 1654, 1693, 1696, 1882
FokI GGATG 6 cut(s) 626, 878, 1429, 1547, 1652, 1811
FriOI GRGCYC 1 cut(s) 429
Fsp4HI GCNGC 8 cut(s) 27, 395, 735, 1063, 1654, 1693, 1696, 1882
FspBI CTAG 8 cut(s) 117, 369, 411, 534, 783, 1002, 1122, 1320
GlaI GCGC 1 cut(s) 48
GluI GCNGC 8 cut(s) 27, 395, 735, 1063, 1654, 1693, 1696, 1882
GsaI CCCAGC 1 cut(s) 1591
GsuI CTGGAG 1 cut(s) 663
HaeII RGCGCY 1 cut(s) 50
HaeIII GGCC 6 cut(s) 250, 295, 668, 741, 1341, 1884
HapII CCGG 3 cut(s) 44, 50, 576
HhaI GCGC 1 cut(s) 49
Hin1I GRCGYC 1 cut(s) 47
Hin6I GCGC 1 cut(s) 47
HinP1I GCGC 1 cut(s) 47
HincII GTYRAC 1 cut(s) 509
HindII GTYRAC 1 cut(s) 509
HindIII AAGCTT 3 cut(s) 438, 933, 1423
HpaII CCGG 3 cut(s) 44, 50, 576
HphI GGTGA 2 cut(s) 948, 1729
Hpy166II GTNNAC 1 cut(s) 509
Hpy188III TCNNGA 8 cut(s) 364, 680, 902, 1040, 1142, 1442, 1522, 1730
Hpy8I GTNNAC 1 cut(s) 509
HpyAV CCTTC 5 cut(s) 89, 826, 1194, 1604, 1715
HpyCH4III ACNGT 1 cut(s) 1439
HpyCH4IV ACGT 1 cut(s) 1715
HpyF10VI GCNNNNNNNGC 4 cut(s) 446, 722, 731, 1089
HpyF3I CTNAG 8 cut(s) 179, 300, 609, 1134, 1280, 1391, 1592, 1724
HpySE526I ACGT 1 cut(s) 1715
Hsp92I GRCGYC 1 cut(s) 47
HspAI GCGC 1 cut(s) 47
KasI GGCGCC 1 cut(s) 46
KflI GGGWCCC 1 cut(s) 1023
KroI GCCGGC 1 cut(s) 49
KroNI GCCGGC 1 cut(s) 51
Ksp22I TGATCA 1 cut(s) 1537
Kzo9I GATC 9 cut(s) 8, 97, 695, 898, 979, 1456, 1509, 1537, 1756
LmnI GCTCC 4 cut(s) 129, 286, 988, 1549
Lsp1109I GCAGC 6 cut(s) 406, 721, 1049, 1640, 1679, 1707
LweI GCATC 5 cut(s) 146, 532, 862, 895, 1237
MabI ACCWGGT 1 cut(s) 1192
MaeI CTAG 8 cut(s) 117, 369, 411, 534, 783, 1002, 1122, 1320
MaeII ACGT 1 cut(s) 1715
MaeIII GTNAC 1 cut(s) 1578
MalI GATC 9 cut(s) 10, 99, 697, 900, 981, 1458, 1511, 1539, 1758
MboI GATC 9 cut(s) 8, 97, 695, 898, 979, 1456, 1509, 1537, 1756
MflI RGATCY 3 cut(s) 97, 695, 898
MhlI GDGCHC 1 cut(s) 429
Mly113I GGCGCC 1 cut(s) 47
MlyI GAGTC 2 cut(s) 1310, 1868
MmeI TCCRAC 3 cut(s) 874, 1512, 1581
Mph1103I ATGCAT 2 cut(s) 945, 1632
MreI CGCCGGCG 1 cut(s) 49
MroNI GCCGGC 1 cut(s) 49
MroXI GAANNNNTTC 2 cut(s) 1410, 1836
MseI TTAA 8 cut(s) 215, 489, 522, 1149, 1616, 1766, 1827, 1945
MspA1I CMGCKG 1 cut(s) 1591
MspCI CTTAAG 1 cut(s) 521
MspI CCGG 3 cut(s) 44, 50, 576
MspR9I CCNGG 8 cut(s) 247, 399, 577, 1194, 1348, 1549, 1780, 1809
Mva1269I GAATGC 2 cut(s) 991, 1552
MvaI CCWGG 7 cut(s) 247, 399, 1194, 1348, 1549, 1780, 1809
MwoI GCNNNNNNNGC 4 cut(s) 446, 722, 731, 1089
NaeI GCCGGC 1 cut(s) 51
NarI GGCGCC 1 cut(s) 47
NciI CCSGG 1 cut(s) 577
NcoI CCATGG 1 cut(s) 124
NdeII GATC 9 cut(s) 8, 97, 695, 898, 979, 1456, 1509, 1537, 1756
NgoMIV GCCGGC 1 cut(s) 49
NlaIV GGNNCC 7 cut(s) 48, 404, 697, 918, 1024, 1025, 1545
NmeAIII GCCGAG 1 cut(s) 1882
NmuCI GTSAC 1 cut(s) 1578
NsiI ATGCAT 2 cut(s) 945, 1632
NspI RCATGY 2 cut(s) 1163, 1337
NspV TTCGAA 1 cut(s) 82
PagI TCATGA 1 cut(s) 1441
PceI AGGCCT 3 cut(s) 250, 295, 668
PctI GAATGC 2 cut(s) 991, 1552
PdiI GCCGGC 1 cut(s) 51
PdmI GAANNNNTTC 2 cut(s) 1410, 1836
PfeI GAWTC 8 cut(s) 812, 998, 1012, 1382, 1466, 1518, 1901, 1912
PkrI GCNGC 8 cut(s) 28, 396, 736, 1064, 1655, 1694, 1697, 1883
Ple19I CGATCG 1 cut(s) 11
PleI GAGTC 2 cut(s) 1310, 1867
PluTI GGCGCC 1 cut(s) 50
PpsI GAGTC 2 cut(s) 1310, 1867
PpuMI RGGWCCY 1 cut(s) 1023
Psp5II RGGWCCY 1 cut(s) 1023
Psp6I CCWGG 7 cut(s) 245, 397, 1192, 1346, 1547, 1778, 1807
PspFI CCCAGC 1 cut(s) 1587
PspGI CCWGG 7 cut(s) 245, 397, 1192, 1346, 1547, 1778, 1807
PspN4I GGNNCC 7 cut(s) 48, 404, 697, 918, 1024, 1025, 1545
PspPI GGNCC 2 cut(s) 589, 1023
PspPPI RGGWCCY 1 cut(s) 1023
PstI CTGCAG 4 cut(s) 739, 1021, 1658, 1697
PstNI CAGNNNCTG 1 cut(s) 1403
PsuI RGATCY 3 cut(s) 97, 695, 898
PvuI CGATCG 1 cut(s) 11
PvuII CAGCTG 1 cut(s) 1591
RsaI GTAC 2 cut(s) 115, 649
RsaNI GTAC 2 cut(s) 114, 648
SaqAI TTAA 8 cut(s) 215, 489, 522, 1149, 1616, 1766, 1827, 1945
SatI GCNGC 8 cut(s) 27, 395, 735, 1063, 1654, 1693, 1696, 1882
Sau3AI GATC 9 cut(s) 8, 97, 695, 898, 979, 1456, 1509, 1537, 1756
Sau96I GGNCC 2 cut(s) 589, 1023
SbfI CCTGCAGG 1 cut(s) 1021
ScaI AGTACT 1 cut(s) 115
SchI GAGTC 2 cut(s) 1310, 1868
ScrFI CCNGG 8 cut(s) 247, 399, 577, 1194, 1348, 1549, 1780, 1809
SdaI CCTGCAGG 1 cut(s) 1021
SduI GDGCHC 1 cut(s) 429
SexAI ACCWGGT 1 cut(s) 1192
SfaNI GCATC 5 cut(s) 146, 532, 862, 895, 1237
SfcI CTRYAG 4 cut(s) 735, 1017, 1654, 1693
SfoI GGCGCC 1 cut(s) 48
SfuI TTCGAA 1 cut(s) 82
SgrAI CRCCGGYG 1 cut(s) 49
SinI GGWCC 2 cut(s) 589, 1023
SmlI CTYRAG 2 cut(s) 428, 521
SmoI CTYRAG 2 cut(s) 428, 521
SpeI ACTAGT 1 cut(s) 368
Sse8387I CCTGCAGG 1 cut(s) 1021
SseBI AGGCCT 3 cut(s) 250, 295, 668
SsiI CCGC 5 cut(s) 26, 592, 1181, 1817, 1881
SspDI GGCGCC 1 cut(s) 46
SspMI CTAG 8 cut(s) 117, 369, 411, 534, 783, 1002, 1122, 1320
StuI AGGCCT 3 cut(s) 250, 295, 668
StyD4I CCNGG 8 cut(s) 245, 397, 575, 1192, 1346, 1547, 1778, 1807
StyI CCWWGG 2 cut(s) 124, 782
TaaI ACNGT 1 cut(s) 1439
TaiI ACGT 1 cut(s) 1718
TaqI TCGA 6 cut(s) 82, 159, 458, 600, 1508, 1516
TatI WGTACW 2 cut(s) 113, 647
TauI GCSGC 2 cut(s) 29, 1884
TfiI GAWTC 8 cut(s) 812, 998, 1012, 1382, 1466, 1518, 1901, 1912
Tru1I TTAA 8 cut(s) 215, 489, 522, 1149, 1616, 1766, 1827, 1945
Tru9I TTAA 8 cut(s) 215, 489, 522, 1149, 1616, 1766, 1827, 1945
TscAI CASTG 6 cut(s) 395, 613, 883, 1284, 1404, 1876
TseFI GTSAC 1 cut(s) 1578
TseI GCWGC 6 cut(s) 394, 734, 1062, 1653, 1692, 1695
Tsp45I GTSAC 1 cut(s) 1578
TspDTI ATGAA 6 cut(s) 17, 1092, 1236, 1458, 1656, 1818
TspGWI ACGGA 1 cut(s) 1251
TspRI CASTG 6 cut(s) 395, 613, 883, 1284, 1404, 1876
Vha464I CTTAAG 1 cut(s) 521
VpaK11BI GGWCC 2 cut(s) 589, 1023
XapI RAATTY 6 cut(s) 359, 625, 789, 1043, 1145, 1255
XceI RCATGY 2 cut(s) 1163, 1337
XmaJI CCTAGG 1 cut(s) 782
XmnI GAANNNNTTC 2 cut(s) 1410, 1836
XspI CTAG 8 cut(s) 117, 369, 411, 534, 783, 1002, 1122, 1320
ZrmI AGTACT 1 cut(s) 115
Zsp2I ATGCAT 2 cut(s) 945, 1632
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.