Rw2G000240

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0012415
Physical Location & Seq
Forward (+)
206532 .. 208493
1962 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G000240.1

Sequence Viewer

Length: 1962 bp
ATGAACCGATCGTTGTCGTCAAAGGCGGCGAAGAAGCCCTCTCCGGCGCCGGCGAAGAAGAACAAAAAAGAGCAGAGAATTCGAAACCCGTTGCAGGATCTCAATGTCATTAGCACCACTGCTAGTACTAGCAACCATGGGAGCGAGGCTTCTTCTTCTTCTTCAATGTCCATCGAAGCCCCACGAGGTTGCCTCAGGTTCTTTCTCTCTCACTCCTCTTCCTCTAATTTAAAAATCCCTATACGCACGCGCACCAGGCCTAAAACTCTCTCCAAAACCCCTAAATCAGCTCCTCTTGTGAGGCCTAAGGAGAACCCCTCCAATTCCAAATGCAATGTTTCCAAACACAACCCACAGAAATCAAAATTCAAGACTAGTTCTTCTTGCTTGTATCACTGGCAGCCTGGGAACCTACCTAGTTGTAGGAATGGGCTCAAGTTGAAAGCTTGTCCAGCTTTGAACTCGAAAGGCAAATCCTTTGAACAAAGGGTAGTTGATGATGATGTAGGTCAACCCAATGAGCTTAAATCAGGTTCTAGTGATGATGCAACTTTTACTCCCTTGTGTAAGATACCTACCGGGTTGGGTTTGGACCGCAAAGTCGATAACACTGAGGATGTGCAACAGAATTCTGACAAGAGTAATAGTAATAGTACAACTCCTCCTGTTCAGGCCTCTGTGTCTCCAGAGATACAATTTGGACCGTCTGCCGTGTCATCAGCCTCGCTGGCTTGTTATGCTGCAGGCCATGTTCTTTCGGGGATCGCTGACAAGAGGAAGTGCAGACCTAGGGGAATTCTCAATGTAGGCGAGAATGATTCAGGCTTTGGGAAAGGGAAGGCTTTATGCAGTTTTGAGGAAGTGGAGGAGGATGACGATGGAACTGCCAAAGGAATGGTTGGAGATCCTGATGCTTCTATGGTTCCCTTACCTACTGAAGCTTCAATGCATTGGATTTTATCACCATGTAATGAGGAAGATGAGGATCACAAGGAGCATTCTGAATCTAGTTTTCAGAATCCTGCAGGGTCCCCCAATAGTGGTCGTGAATTCTCTTCAGATGTATGCTGCGATAACAACTATCAAAGCACTACTTGCCGTAGCAGGAGGAATACTTCCATTTCTCCTATTGGAGTTCCTAAGTTTCAAGAATTGTTGGAGCCCTTAAATGAGCTTGTGCCTGTTTTGTCTTCTCCGCGTTCTACACCTGGTTGTGAGGCTCTACCCTTGAAAGATGAAAGACAATATATTTATGAGTTTGATGCAGATAATTCTCCGTTTTCTCTGGCTTCACTGAGTAGTGGGAATGTTATTCTTTCACCTCAGTCAGACTCAAGTGCAGATAGACATGCTGGCCTGTCATGGTCAAATACAGACAACCATAGGAAACACTATGATTCTGAACTCAGTTCAGTGGCTGAAGCTATTCGGATGGCAAGCTTGTCTCCAAACCGTCATGAACTGATTGAGGATCAGATTGATTCAAGTTTCCAATTTGATTGTCTAACTACAACTTGTAATTCGATCAGTCGAATCCAGAAAATGTTGGATGATCAGGCTCCCTGGCATTCCAACTCCACTTTAGAGAATGTGTCACAATCCCAGCTGAGGATATCATGGAGAGAAGGGTTAATGAGCCGTATGCATGACATGGATGAATATGATTGCTGCAGATGTTTATCAGACGAAGAGGAAGATATCAATGGCTGCAGCAATGACCTTCCCAAAAAGTCCTGTCTAAGTCCTGAAATCACCAACAATGTTGAGGCAGATCAGATTTTAACTGATACTTCCTGGTCTGCTGATATACTGGATGATGAACCAGGAGTTGCGGGAAAAGTTAAAGAAGACTTTCCTCCTCAATCATGTGCCGAGTCCATAAGCACTGATGGAGGCGGCCTGCTTGCTTCAGGGGATTCAGACTGGAATCTCTGCTACAAGAATGAGCTGTTCCATGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

653

Amino Acids

71.2

Weight (kDa)

5.31

Isoelectric Point (pI)

61.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012415)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G43990
fragaria_vesca FvH4_1g00220
malus_domestica MD00G1086900.v1.1 MD15G1142800.v1.1
prunus_persica Prupe.7G270200_v2.0.a1 Prupe.7G270200_v2.0.a1
pyrus_communis pycom15g12890 pycom290g00170
rosa_chinensis RchiOBHm_Chr2g0084511
rosa_laevigata RLG00000015623
rosa_multiflora Rmu_co8107158.1_g000001 Rmu_sc0009647.1_g000004
rosa_roxburghii Rroxscaffold_2G00156000
rosa_rugosa Rorug01G0454600
rosa_samantha Rh2AG002700 Rh2BG002300 Rh2CG002800 Rh2DG002800
rosa_wichuraiana Rw2G000240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 599
AccB1I GGYRCC 1 cut(s) 46
AccII CGCG 2 cut(s) 250, 1198
AciI CCGC 5 cut(s) 26, 595, 1196, 1832, 1896
AclWI GGATC 5 cut(s) 105, 770, 899, 993, 1479
AcsI RAATTY 5 cut(s) 78, 365, 628, 795, 1049
AcuI CTGAAG 4 cut(s) 957, 1041, 1440, 1893
AcyI GRCGYC 1 cut(s) 47
AfaI GTAC 2 cut(s) 127, 655
AfiI CCNNNNNNNGG 3 cut(s) 94, 1040, 1608
AgsI TTSAA 9 cut(s) 165, 370, 442, 460, 482, 945, 1148, 1231, 1485
AhlI ACTAGT 1 cut(s) 374
AjnI CCWGG 6 cut(s) 254, 403, 1207, 1562, 1793, 1822
Alw26I GTCTC 2 cut(s) 687, 1449
AlwI GGATC 5 cut(s) 105, 770, 899, 993, 1479
AlwNI CAGNNNCTG 1 cut(s) 1418
AoxI GGCC 6 cut(s) 257, 302, 672, 745, 1354, 1897
ApeKI GCWGC 6 cut(s) 400, 740, 1068, 1668, 1707, 1710
ApoI RAATTY 5 cut(s) 78, 365, 628, 795, 1049
Asp700I GAANNNNTTC 2 cut(s) 1425, 1851
AspA2I CCTAGG 1 cut(s) 788
AspLEI GCGC 2 cut(s) 49, 252
AspS9I GGNCC 3 cut(s) 592, 701, 1029
AsuC2I CCSGG 1 cut(s) 580
AsuHPI GGTGA 3 cut(s) 954, 1311, 1744
AsuII TTCGAA 1 cut(s) 82
AvaII GGWCC 3 cut(s) 592, 701, 1029
AvrII CCTAGG 1 cut(s) 788
AxyI CCTNAGG 2 cut(s) 194, 306
BanI GGYRCC 1 cut(s) 46
BanII GRGCYC 2 cut(s) 435, 1164
BauI CACGAG 1 cut(s) 183
BbsI GAAGAC 2 cut(s) 1182, 1854
BbvCI CCTCAGC 1 cut(s) 1607
BbvI GCAGC 6 cut(s) 412, 727, 1055, 1655, 1694, 1722
BccI CCATC 4 cut(s) 179, 872, 1426, 1883
BceAI ACGGC 3 cut(s) 695, 1083, 1623
BcgI CGANNNNNNTGC 4 cut(s) 62, 96, 866, 900
BciT130I CCWGG 6 cut(s) 256, 405, 1209, 1564, 1795, 1824
BclI TGATCA 1 cut(s) 1552
BcnI CCSGG 1 cut(s) 580
BcoDI GTCTC 2 cut(s) 687, 1449
BcuI ACTAGT 1 cut(s) 374
BfaI CTAG 7 cut(s) 123, 129, 375, 417, 537, 789, 1008
BfmI CTRYAG 4 cut(s) 741, 1023, 1669, 1708
BfoI RGCGCY 1 cut(s) 50
BglI GCCNNNNNGGC 1 cut(s) 728
BisI GCNGC 8 cut(s) 27, 401, 741, 1069, 1669, 1708, 1711, 1897
BlnI CCTAGG 1 cut(s) 788
BlsI GCNGC 8 cut(s) 28, 402, 742, 1070, 1670, 1709, 1712, 1898
BmcAI AGTACT 1 cut(s) 127
Bme1390I CCNGG 7 cut(s) 256, 405, 580, 1209, 1564, 1795, 1824
Bme18I GGWCC 3 cut(s) 592, 701, 1029
BmgT120I GGNCC 3 cut(s) 592, 701, 1029
BmiI GGNNCC 7 cut(s) 48, 410, 924, 1030, 1031, 1161, 1560
BmrFI CCNGG 7 cut(s) 256, 405, 580, 1209, 1564, 1795, 1824
BmsI GCATC 3 cut(s) 535, 901, 1252
BpiI GAAGAC 2 cut(s) 1182, 1854
BplI GAGNNNNNCTC 4 cut(s) 177, 209, 302, 334
BpmI CTGGAG 1 cut(s) 669
Bpu10I CCTNAGC 1 cut(s) 1607
Bpu14I TTCGAA 1 cut(s) 82
BpuEI CTTGAG 2 cut(s) 419, 1318
BpuMI CCSGG 1 cut(s) 580
BsaBI GATNNNNATC 2 cut(s) 984, 1678
BsaHI GRCGYC 1 cut(s) 47
BsaJI CCNNGG 4 cut(s) 136, 404, 788, 1562
BsaXI ACNNNNNCTCC 4 cut(s) 541, 571, 646, 676
Bsc4I CCNNNNNNNGG 3 cut(s) 94, 1040, 1608
Bse118I RCCGGY 1 cut(s) 49
Bse1I ACTGG 3 cut(s) 401, 1815, 1928
Bse21I CCTNAGG 2 cut(s) 194, 306
Bse3DI GCAATG 2 cut(s) 340, 1720
Bse8I GATNNNNATC 2 cut(s) 984, 1678
BseBI CCWGG 6 cut(s) 256, 405, 1209, 1564, 1795, 1824
BseDI CCNNGG 4 cut(s) 136, 404, 788, 1562
BseGI GGATG 6 cut(s) 622, 877, 1437, 1555, 1660, 1819
BseJI GATNNNNATC 2 cut(s) 984, 1678
BseLI CCNNNNNNNGG 3 cut(s) 94, 1040, 1608
BseMI GCAATG 2 cut(s) 340, 1720
BseMII CTCAG 6 cut(s) 208, 603, 1286, 1337, 1420, 1598
BseNI ACTGG 3 cut(s) 401, 1815, 1928
BseRI GAGGAG 5 cut(s) 205, 282, 651, 881, 1848
BseXI GCAGC 6 cut(s) 412, 727, 1055, 1655, 1694, 1722
BseYI CCCAGC 1 cut(s) 1602
BsgI GTGCAG 2 cut(s) 802, 1359
Bsh1236I CGCG 2 cut(s) 250, 1198
Bsh1285I CGRYCG 1 cut(s) 11
BshFI GGCC 6 cut(s) 259, 304, 674, 747, 1356, 1899
BshNI GGYRCC 1 cut(s) 46
BsiEI CGRYCG 1 cut(s) 11
BsiSI CCGG 3 cut(s) 44, 50, 579
BslFI GGGAC 1 cut(s) 1015
BslI CCNNNNNNNGG 3 cut(s) 94, 1040, 1608
BsmAI GTCTC 2 cut(s) 687, 1449
BsmFI GGGAC 1 cut(s) 1015
BsmI GAATGC 2 cut(s) 997, 1567
BsnI GGCC 6 cut(s) 259, 304, 674, 747, 1356, 1899
Bsp119I TTCGAA 1 cut(s) 82
Bsp1286I GDGCHC 2 cut(s) 435, 1164
Bsp143I GATC 9 cut(s) 8, 97, 762, 904, 985, 1471, 1524, 1552, 1771
Bsp19I CCATGG 1 cut(s) 136
BspACI CCGC 5 cut(s) 26, 595, 1196, 1832, 1896
BspANI GGCC 6 cut(s) 259, 304, 674, 747, 1356, 1899
BspCNI CTCAG 6 cut(s) 207, 604, 1287, 1336, 1419, 1599
BspFNI CGCG 2 cut(s) 250, 1198
BspHI TCATGA 1 cut(s) 1456
BspLI GGNNCC 7 cut(s) 48, 410, 924, 1030, 1031, 1161, 1560
BspMAI CTGCAG 4 cut(s) 745, 1027, 1673, 1712
BspPI GGATC 5 cut(s) 105, 770, 899, 993, 1479
BspT104I TTCGAA 1 cut(s) 82
BspT107I GGYRCC 1 cut(s) 46
BsrDI GCAATG 2 cut(s) 340, 1720
BsrFI RCCGGY 1 cut(s) 49
BsrI ACTGG 3 cut(s) 401, 1815, 1928
BssAI RCCGGY 1 cut(s) 49
BssECI CCNNGG 4 cut(s) 136, 404, 788, 1562
BssMI GATC 9 cut(s) 8, 97, 762, 904, 985, 1471, 1524, 1552, 1771
BssNI GRCGYC 1 cut(s) 47
BssSI CACGAG 1 cut(s) 183
BssT1I CCWWGG 2 cut(s) 136, 788
Bst2BI CACGAG 1 cut(s) 183
Bst2UI CCWGG 6 cut(s) 256, 405, 1209, 1564, 1795, 1824
Bst4CI ACNGT 2 cut(s) 705, 1454
Bst6I CTCTTC 3 cut(s) 223, 1060, 1683
BstACI GRCGYC 1 cut(s) 47
BstAPI GCANNNNNTGC 1 cut(s) 1095
BstBI TTCGAA 1 cut(s) 82
BstC8I GCNNGC 8 cut(s) 51, 248, 729, 745, 1354, 1438, 1901, 1905
BstDEI CTNAG 9 cut(s) 194, 306, 612, 1140, 1295, 1323, 1406, 1607, 1739
BstDSI CCRYGG 1 cut(s) 136
BstF5I GGATG 6 cut(s) 622, 877, 1437, 1555, 1660, 1819
BstFNI CGCG 2 cut(s) 250, 1198
BstH2I RGCGCY 1 cut(s) 50
BstHHI GCGC 2 cut(s) 49, 252
BstKTI GATC 9 cut(s) 11, 100, 765, 907, 988, 1474, 1527, 1555, 1774
BstMAI GTCTC 2 cut(s) 687, 1449
BstMBI GATC 9 cut(s) 8, 97, 762, 904, 985, 1471, 1524, 1552, 1771
BstMCI CGRYCG 1 cut(s) 11
BstMWI GCNNNNNNNGC 5 cut(s) 256, 452, 728, 737, 1095
BstNI CCWGG 6 cut(s) 256, 405, 1209, 1564, 1795, 1824
BstNSI RCATGY 1 cut(s) 1352
BstSCI CCNGG 7 cut(s) 254, 403, 578, 1207, 1562, 1793, 1822
BstSFI CTRYAG 4 cut(s) 741, 1023, 1669, 1708
BstUI CGCG 2 cut(s) 250, 1198
BstV1I GCAGC 6 cut(s) 412, 727, 1055, 1655, 1694, 1722
BstV2I GAAGAC 2 cut(s) 1182, 1854
BstX2I RGATCY 2 cut(s) 97, 904
BstXI CCANNNNNNTGG 1 cut(s) 895
BstYI RGATCY 2 cut(s) 97, 904
Bsu36I CCTNAGG 2 cut(s) 194, 306
BsuRI GGCC 6 cut(s) 259, 304, 674, 747, 1356, 1899
BtgI CCRYGG 1 cut(s) 136
BtsCI GGATG 6 cut(s) 622, 877, 1437, 1555, 1660, 1819
BtsI GCAGTG 1 cut(s) 117
BtsIMutI CAGTG 6 cut(s) 117, 394, 609, 1292, 1419, 1884
Cac8I GCNNGC 8 cut(s) 51, 248, 729, 745, 1354, 1438, 1901, 1905
CaiI CAGNNNCTG 1 cut(s) 1418
CciI TCATGA 1 cut(s) 1456
CfoI GCGC 2 cut(s) 49, 252
Cfr10I RCCGGY 1 cut(s) 49
Cfr13I GGNCC 3 cut(s) 592, 701, 1029
CsiI ACCWGGT 1 cut(s) 1207
Csp6I GTAC 2 cut(s) 126, 654
CviQI GTAC 2 cut(s) 126, 654
DdeI CTNAG 9 cut(s) 194, 306, 612, 1140, 1295, 1323, 1406, 1607, 1739
DinI GGCGCC 1 cut(s) 48
DpnI GATC 9 cut(s) 10, 99, 764, 906, 987, 1473, 1526, 1554, 1773
DpnII GATC 9 cut(s) 8, 97, 762, 904, 985, 1471, 1524, 1552, 1771
DraI TTTAAA 1 cut(s) 231
DrdI GACNNNNNNGTC 1 cut(s) 599
DseDI GACNNNNNNGTC 1 cut(s) 599
Eam1104I CTCTTC 3 cut(s) 223, 1060, 1683
EarI CTCTTC 3 cut(s) 223, 1060, 1683
Eco130I CCWWGG 2 cut(s) 136, 788
Eco147I AGGCCT 3 cut(s) 259, 304, 674
Eco24I GRGCYC 2 cut(s) 435, 1164
Eco32I GATATC 2 cut(s) 1614, 1699
Eco47I GGWCC 3 cut(s) 592, 701, 1029
Eco57I CTGAAG 4 cut(s) 957, 1041, 1440, 1893
Eco81I CCTNAGG 2 cut(s) 194, 306
EcoO109I RGGNCCY 1 cut(s) 1029
EcoRI GAATTC 4 cut(s) 78, 628, 795, 1049
EcoRII CCWGG 6 cut(s) 254, 403, 1207, 1562, 1793, 1822
EcoRV GATATC 2 cut(s) 1614, 1699
EcoT14I CCWWGG 2 cut(s) 136, 788
EcoT22I ATGCAT 2 cut(s) 951, 1647
EcoT38I GRGCYC 2 cut(s) 435, 1164
EgeI GGCGCC 1 cut(s) 48
EheI GGCGCC 1 cut(s) 48
ErhI CCWWGG 2 cut(s) 136, 788
FalI AAGNNNNNCTT 2 cut(s) 1078, 1110
FaqI GGGAC 1 cut(s) 1015
FauI CCCGC 1 cut(s) 1825
FbaI TGATCA 1 cut(s) 1552
Fnu4HI GCNGC 8 cut(s) 27, 401, 741, 1069, 1669, 1708, 1711, 1897
FokI GGATG 6 cut(s) 629, 884, 1444, 1562, 1667, 1826
FriOI GRGCYC 2 cut(s) 435, 1164
Fsp4HI GCNGC 8 cut(s) 27, 401, 741, 1069, 1669, 1708, 1711, 1897
FspBI CTAG 7 cut(s) 123, 129, 375, 417, 537, 789, 1008
GlaI GCGC 2 cut(s) 48, 251
GluI GCNGC 8 cut(s) 27, 401, 741, 1069, 1669, 1708, 1711, 1897
GsaI CCCAGC 1 cut(s) 1606
GsuI CTGGAG 1 cut(s) 669
HaeII RGCGCY 1 cut(s) 50
HaeIII GGCC 6 cut(s) 259, 304, 674, 747, 1356, 1899
HapII CCGG 3 cut(s) 44, 50, 579
HhaI GCGC 2 cut(s) 49, 252
Hin1I GRCGYC 1 cut(s) 47
Hin6I GCGC 2 cut(s) 47, 250
HinP1I GCGC 2 cut(s) 47, 250
HincII GTYRAC 1 cut(s) 512
HindII GTYRAC 1 cut(s) 512
HindIII AAGCTT 3 cut(s) 444, 939, 1438
HpaII CCGG 3 cut(s) 44, 50, 579
HphI GGTGA 3 cut(s) 954, 1311, 1744
Hpy166II GTNNAC 1 cut(s) 512
Hpy188III TCNNGA 8 cut(s) 370, 686, 908, 1046, 1148, 1457, 1537, 1745
Hpy8I GTNNAC 1 cut(s) 512
HpyAV CCTTC 3 cut(s) 832, 1619, 1730
HpyCH4III ACNGT 2 cut(s) 705, 1454
HpyF10VI GCNNNNNNNGC 5 cut(s) 256, 452, 728, 737, 1095
HpyF3I CTNAG 9 cut(s) 194, 306, 612, 1140, 1295, 1323, 1406, 1607, 1739
Hsp92I GRCGYC 1 cut(s) 47
HspAI GCGC 2 cut(s) 47, 250
KasI GGCGCC 1 cut(s) 46
KflI GGGWCCC 1 cut(s) 1029
KroI GCCGGC 1 cut(s) 49
KroNI GCCGGC 1 cut(s) 51
Ksp22I TGATCA 1 cut(s) 1552
Kzo9I GATC 9 cut(s) 8, 97, 762, 904, 985, 1471, 1524, 1552, 1771
LmnI GCTCC 5 cut(s) 141, 295, 994, 1159, 1564
Lsp1109I GCAGC 6 cut(s) 412, 727, 1055, 1655, 1694, 1722
LweI GCATC 3 cut(s) 535, 901, 1252
MabI ACCWGGT 1 cut(s) 1207
MaeI CTAG 7 cut(s) 123, 129, 375, 417, 537, 789, 1008
MaeIII GTNAC 1 cut(s) 1593
MalI GATC 9 cut(s) 10, 99, 764, 906, 987, 1473, 1526, 1554, 1773
MboI GATC 9 cut(s) 8, 97, 762, 904, 985, 1471, 1524, 1552, 1771
MflI RGATCY 2 cut(s) 97, 904
MhlI GDGCHC 2 cut(s) 435, 1164
Mly113I GGCGCC 1 cut(s) 47
MlyI GAGTC 2 cut(s) 1325, 1883
MmeI TCCRAC 4 cut(s) 880, 1137, 1527, 1596
Mph1103I ATGCAT 2 cut(s) 951, 1647
MreI CGCCGGCG 1 cut(s) 49
MroNI GCCGGC 1 cut(s) 49
MroXI GAANNNNTTC 2 cut(s) 1425, 1851
MseI TTAA 7 cut(s) 230, 525, 1166, 1631, 1781, 1842, 1960
MspA1I CMGCKG 1 cut(s) 1606
MspI CCGG 3 cut(s) 44, 50, 579
MspR9I CCNGG 7 cut(s) 256, 405, 580, 1209, 1564, 1795, 1824
Mva1269I GAATGC 2 cut(s) 997, 1567
MvaI CCWGG 6 cut(s) 256, 405, 1209, 1564, 1795, 1824
MvnI CGCG 2 cut(s) 250, 1198
MwoI GCNNNNNNNGC 5 cut(s) 256, 452, 728, 737, 1095
NaeI GCCGGC 1 cut(s) 51
NarI GGCGCC 1 cut(s) 47
NciI CCSGG 1 cut(s) 580
NcoI CCATGG 1 cut(s) 136
NdeII GATC 9 cut(s) 8, 97, 762, 904, 985, 1471, 1524, 1552, 1771
NgoMIV GCCGGC 1 cut(s) 49
NlaIV GGNNCC 7 cut(s) 48, 410, 924, 1030, 1031, 1161, 1560
NmeAIII GCCGAG 1 cut(s) 1897
NmuCI GTSAC 1 cut(s) 1593
NsiI ATGCAT 2 cut(s) 951, 1647
NspI RCATGY 1 cut(s) 1352
NspV TTCGAA 1 cut(s) 82
PagI TCATGA 1 cut(s) 1456
PceI AGGCCT 3 cut(s) 259, 304, 674
PctI GAATGC 2 cut(s) 997, 1567
PdiI GCCGGC 1 cut(s) 51
PdmI GAANNNNTTC 2 cut(s) 1425, 1851
PfeI GAWTC 8 cut(s) 818, 1004, 1018, 1397, 1481, 1533, 1916, 1927
PkrI GCNGC 8 cut(s) 28, 402, 742, 1070, 1670, 1709, 1712, 1898
Ple19I CGATCG 1 cut(s) 11
PleI GAGTC 2 cut(s) 1325, 1882
PluTI GGCGCC 1 cut(s) 50
PpsI GAGTC 2 cut(s) 1325, 1882
PpuMI RGGWCCY 1 cut(s) 1029
Psp5II RGGWCCY 1 cut(s) 1029
Psp6I CCWGG 6 cut(s) 254, 403, 1207, 1562, 1793, 1822
PspFI CCCAGC 1 cut(s) 1602
PspGI CCWGG 6 cut(s) 254, 403, 1207, 1562, 1793, 1822
PspN4I GGNNCC 7 cut(s) 48, 410, 924, 1030, 1031, 1161, 1560
PspPI GGNCC 3 cut(s) 592, 701, 1029
PspPPI RGGWCCY 1 cut(s) 1029
PstI CTGCAG 4 cut(s) 745, 1027, 1673, 1712
PstNI CAGNNNCTG 1 cut(s) 1418
PsuI RGATCY 2 cut(s) 97, 904
PvuI CGATCG 1 cut(s) 11
PvuII CAGCTG 1 cut(s) 1606
RsaI GTAC 2 cut(s) 127, 655
RsaNI GTAC 2 cut(s) 126, 654
SaqAI TTAA 7 cut(s) 230, 525, 1166, 1631, 1781, 1842, 1960
SatI GCNGC 8 cut(s) 27, 401, 741, 1069, 1669, 1708, 1711, 1897
Sau3AI GATC 9 cut(s) 8, 97, 762, 904, 985, 1471, 1524, 1552, 1771
Sau96I GGNCC 3 cut(s) 592, 701, 1029
SbfI CCTGCAGG 1 cut(s) 1027
ScaI AGTACT 1 cut(s) 127
SchI GAGTC 2 cut(s) 1325, 1883
ScrFI CCNGG 7 cut(s) 256, 405, 580, 1209, 1564, 1795, 1824
SdaI CCTGCAGG 1 cut(s) 1027
SduI GDGCHC 2 cut(s) 435, 1164
SexAI ACCWGGT 1 cut(s) 1207
SfaNI GCATC 3 cut(s) 535, 901, 1252
SfcI CTRYAG 4 cut(s) 741, 1023, 1669, 1708
SfoI GGCGCC 1 cut(s) 48
SfuI TTCGAA 1 cut(s) 82
SgrAI CRCCGGYG 1 cut(s) 49
SinI GGWCC 3 cut(s) 592, 701, 1029
SmlI CTYRAG 2 cut(s) 434, 1333
SmoI CTYRAG 2 cut(s) 434, 1333
SpeI ACTAGT 1 cut(s) 374
Sse8387I CCTGCAGG 1 cut(s) 1027
SseBI AGGCCT 3 cut(s) 259, 304, 674
SsiI CCGC 5 cut(s) 26, 595, 1196, 1832, 1896
SspDI GGCGCC 1 cut(s) 46
SspMI CTAG 7 cut(s) 123, 129, 375, 417, 537, 789, 1008
StuI AGGCCT 3 cut(s) 259, 304, 674
StyD4I CCNGG 7 cut(s) 254, 403, 578, 1207, 1562, 1793, 1822
StyI CCWWGG 2 cut(s) 136, 788
TaaI ACNGT 2 cut(s) 705, 1454
TaqI TCGA 6 cut(s) 82, 174, 464, 603, 1523, 1531
TatI WGTACW 2 cut(s) 125, 653
TauI GCSGC 2 cut(s) 29, 1899
TfiI GAWTC 8 cut(s) 818, 1004, 1018, 1397, 1481, 1533, 1916, 1927
Tru1I TTAA 7 cut(s) 230, 525, 1166, 1631, 1781, 1842, 1960
Tru9I TTAA 7 cut(s) 230, 525, 1166, 1631, 1781, 1842, 1960
TscAI CASTG 6 cut(s) 124, 401, 616, 1299, 1419, 1891
TseFI GTSAC 1 cut(s) 1593
TseI GCWGC 6 cut(s) 400, 740, 1068, 1668, 1707, 1710
Tsp45I GTSAC 1 cut(s) 1593
TspDTI ATGAA 5 cut(s) 17, 1251, 1473, 1671, 1833
TspGWI ACGGA 1 cut(s) 1266
TspRI CASTG 6 cut(s) 124, 401, 616, 1299, 1419, 1891
VpaK11BI GGWCC 3 cut(s) 592, 701, 1029
XapI RAATTY 5 cut(s) 78, 365, 628, 795, 1049
XceI RCATGY 1 cut(s) 1352
XmaJI CCTAGG 1 cut(s) 788
XmnI GAANNNNTTC 2 cut(s) 1425, 1851
XspI CTAG 7 cut(s) 123, 129, 375, 417, 537, 789, 1008
ZrmI AGTACT 1 cut(s) 127
Zsp2I ATGCAT 2 cut(s) 951, 1647
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.