Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0010784

Physical Location & Seq

Genomic Coordinates Forward (+)

54939813 .. 54945259

Gene Structure 5447 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0454600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2280 bp

ATGGATGGTGATGCTACTATTTGGACCTCCAACACTTCAGGCACCGGCGTTGAATTTGCATCCCTATTAGAATCTGGAAACTTCATCTTATACAATGAAGCCAACCGCCCTATGTGGCAGAGTTTCTCACATCCATCTGATACTCTCCTCCCAAACCAGCCTCTTTCGGTCTCTTTAGAGCTCACAACAGCTAAGTCACCCTCTCATGGTGGCTATTATGCTCTCAAAATGCTTCAACAGCGCACTTCGTTAAGCCTTGCATTGACTTATAATATGCCAGAAAGTACTTACAATACCTCACCAGAATCTTACTATAACAACTCTTACTGGACTGGACCGGAGATATCAAATGTGACAGGAGATGTCATAGCGGTTTTGGATGAAGCAGGAAGCTTTGGAATTGTGTACGGTGAGTCTTCAGATGGAGCTGTATATGTGTACAAGAATGATGGTGATGATGGAGGACTATCAGCAGCCTCAAACAAATCAAACAGATTGTCAGTTCTTCGGAGATTGACACTCGAAACTAATGGAAATTTGCGTTTGTATCGTTGGGATGATGATGTCAATGGGTCAAGGCAATGGGTGTCAGAGTGGGCTGCAGTTTCAACACCATGTGACATTTCTGGAATTTGTGGTAATGGGATTTGTACTTTAGATAGGACCAAGGCCAATGCTTCTTGCTCATGTCTGCCAGGGACTTATAAGGTGAATAGTGGAGGTCAGTGTTCAGAGAACTCATCATTGATTGGAAGATGTGATTCGAAGCAGGATTATCAACCTTCACAGTTTAGAATGTCCACGGTGCAGCAAACCAATTACTATTTGCCAAAATTTTCAGTCATAGCAAATTATAGTGACATTGAAAATGTATCAAAATGTGGAGATGTTTGCTTAGCTGATTGTGAATGTGTTGCTTCAGTTTACGGGCTTGATGATGAAAATGCTTACTGTTGGGTTTTGAGGAGCATGGAGTTTGGTGGCTTTCAGGACCCTGGCTCAACCTTGTTTGTCAAAATTAGGTCCAATGGCTCGGTGGTACCAGAGGGAGATACAAGAGGATCCGGGGATTCATCAGATGGGTCTAGTAGTAACAGAGAAAAGGTTTTGGTTATACCTATTGTTCTGAGCATGACTGTTCTTATAGCCCTCCTATGTCTCTTACTATATTACAATGTGCATAAGAGGAGATCCTTCAAGAGAGCCATGGAGAAGTCTTTAATCTTGTCTGGTGCTCCAATGAATTTTAGTTACCGTGATTTACAAGTTCGTACCTGGAATTTTTCACAGCTTCTTGGAACTGGGGGCTTTGGGAGTGTGTACAAGGGAAGCCTTGCAGATGGTACTTTGGTTGCAGTTAAAAAACTTGAAAGGGTTTTGCCCCATGGGGAGAAGGAGTTTATAACTGAAGTCAACACCATTGGCTCTATGCATCACATGAACTTGGTTCGGCTATGTGGCTACTGCTCCGAAGCTTCACAACGGCTTTTGGTTTATGAATTCATGAAAAATGGGTCATTGGACAAATGGATATTTCCCTCAAAATATTCTGGACATAGGTTGCTGGACTGGGAAACTCGCTTTAACATAGCAGTGGGAACTGCACAAGGGATTGCATATTTTCATGAGCAATGTCGAGATCGAGTAATACACTGTGACATCAAGCCGGAAAATATTCTTATAGATGAAAATTTCTGTCCTAAAGTGTCTGACTTTGGACTAGCTAAGTTGATGAGAAGAGAGCACTCACAGGTTGTTACCATGGTCAGAGGAACTAGAGGCTATTTGGCTCCAGAGTGGGTGAGTAACCGGCCTATAACTGTCAAGGCTGATGTTTATAGCTATGGCATGCTTCTCCTAGAGATCGTTGGTGGTCGAAGAAACCTTGACATGTCTTTTGATGTTGATGACTTCTTCTATCCTGGATGGGCTTTTAAGGAGATGACAAGTGGAGAGCCACTGAAAGTTGCAGATAGGAGACTAGAAGGAGCAGTGGAAGAAGAAGAACTCATAAGAGCCTTGCAAACCGCATTTTGGTGCATACAAGATGAGGTTTTCATGAGACCTACAATGGGGGAAGTGGTGAGGATGCTGGAAGGATCGGTCGAAATCAACATGCCACCAATGCCCCAGACAGTTTTGGAGTTAATTGATGAAGGCTTAGATCATGTGTACAGAGCCATGAGGAGAGAGTTCAACAACCACTTCAGCTCATTCACCATCAACACCCACCATTCATCTCAAGCTACATGCAGTTATTCCACAATGTCCCCTAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006148 GO:0006152 GO:0006725 GO:0006807 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008194 GO:0008477 GO:0009056 GO:0009116 GO:0009119 GO:0009164 GO:0009987 GO:0010150 GO:0016740 GO:0016757 GO:0016758 GO:0016787 GO:0016798 GO:0016799 GO:0019439 GO:0032501 GO:0032502 GO:0034641 GO:0034655 GO:0034656 GO:0035251 GO:0042278 GO:0042454 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046102 GO:0046128 GO:0046130 GO:0046483 GO:0046527 GO:0046700 GO:0047724 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0055086 GO:0071704 GO:0072521 GO:0072523 GO:0090693 GO:0099402 GO:1901135 GO:1901136 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901657 GO:1901658

KEGG Pathways

Metabolic & Signaling

ko00240 ko00760 map00240 map00760

Pfam Domains

Protein Families

IU_nuc_hydro

Protein Analysis

759

Amino Acids

84.7

Weight (kDa)

5.37

Isoelectric Point (pI)

37.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	4 - 60	7e-10	D-mannose binding lectin
S_locus_glycop	PF00954	157 - 233	9.5e-09	S-locus glycoprotein domain
Pkinase	PF00069	427 - 628	2.3e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	428 - 696	1.4e-39	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010784)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05620 AT1G05620
fragaria_vesca	FvH4_1g00210
malus_domestica	MD00G1087000.v1.1 MD15G1142900.v1.1
prunus_persica	Prupe.7G270100_v2.0.a1 Prupe.7G270100_v2.0.a1
pyrus_communis	pycom15g12900 pycom290g00180
rosa_chinensis	RchiOBHm_Chr2g0084501
rosa_multiflora	Rmu_co8418457.1_g000001 Rmu_sc0009647.1_g000005
rosa_roxburghii	Rroxscaffold_2G00156010
rosa_rugosa	Rorug01G0454600 Rorug01G0454600
rosa_samantha	Rh2AG002600 Rh2BG002200 Rh2CG002700 Rh2DG002700
rosa_wichuraiana	Rw2G000230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	270, 705, 1403
Acc65I	GGTACC	1 cut(s)	1039
AccB1I	GGYRCC	2 cut(s)	41, 1039
AciI	CCGC	3 cut(s)	106, 371, 2028
AclWI	GGATC	4 cut(s)	1056, 1069, 1185, 2107
AcsI	RAATTY	8 cut(s)	53, 535, 630, 833, 1243, 1279, 1499, 1690
AcuI	CTGAAG	5 cut(s)	21, 402, 903, 1428, 2191
AdeI	CACNNNGTG	1 cut(s)	617
AfaI	GTAC	9 cut(s)	286, 407, 440, 652, 1041, 1273, 1322, 1345, 2174
AfiI	CCNNNNNNNGG	3 cut(s)	206, 2034, 2072
AflIII	ACRYGT	1 cut(s)	1890
AgsI	TTSAA	7 cut(s)	53, 236, 609, 866, 1198, 1370, 2197
AjnI	CCWGG	4 cut(s)	694, 994, 1274, 1921
Alw21I	GWGCWC	3 cut(s)	183, 1237, 1746
Alw26I	GTCTC	4 cut(s)	175, 1163, 1972, 2056
AlwI	GGATC	4 cut(s)	1056, 1069, 1185, 2107
AoxI	GGCC	2 cut(s)	669, 1811
ApeKI	GCWGC	3 cut(s)	473, 599, 808
ApoI	RAATTY	8 cut(s)	53, 535, 630, 833, 1243, 1279, 1499, 1690
ArsI	GACNNNNNNTTYG	4 cut(s)	482, 514, 1880, 1912
Asp700I	GAANNNNTTC	1 cut(s)	1674
Asp718I	GGTACC	1 cut(s)	1039
AspLEI	GCGC	1 cut(s)	243
AspS9I	GGNCC	5 cut(s)	24, 335, 663, 991, 1023
AsuC2I	CCSGG	1 cut(s)	1066
AsuHPI	GGTGA	9 cut(s)	20, 189, 291, 422, 464, 721, 1813, 2095, 2209
AsuII	TTCGAA	1 cut(s)	764
AvaII	GGWCC	5 cut(s)	24, 335, 663, 991, 1023
BaeI	ACNNNNGTAYC	2 cut(s)	1335, 1368
BamHI	GGATCC	1 cut(s)	1061
BanI	GGYRCC	2 cut(s)	41, 1039
BanII	GRGCYC	1 cut(s)	183
BbsI	GAAGAC	1 cut(s)	408
Bbv12I	GWGCWC	3 cut(s)	183, 1237, 1746
BbvI	GCAGC	3 cut(s)	485, 586, 820
BccI	CCATC	8 cut(s)	142, 416, 443, 452, 1073, 1334, 1920, 2228
BceAI	ACGGC	1 cut(s)	1499
BciT130I	CCWGG	4 cut(s)	696, 996, 1276, 1923
BcnI	CCSGG	1 cut(s)	1066
BcoDI	GTCTC	4 cut(s)	175, 1163, 1972, 2056
BfaI	CTAG	6 cut(s)	1086, 1721, 1776, 1859, 1982, 2274
BfmI	CTRYAG	1 cut(s)	600
BisI	GCNGC	3 cut(s)	474, 600, 809
BlpI	GCTNAGC	1 cut(s)	895
BlsI	GCNGC	3 cut(s)	475, 601, 810
BmcAI	AGTACT	1 cut(s)	286
Bme1390I	CCNGG	5 cut(s)	696, 996, 1066, 1276, 1923
Bme18I	GGWCC	5 cut(s)	24, 335, 663, 991, 1023
BmgT120I	GGNCC	5 cut(s)	24, 335, 663, 991, 1023
BmiI	GGNNCC	5 cut(s)	43, 993, 1041, 1063, 1791
BmrFI	CCNGG	5 cut(s)	696, 996, 1066, 1276, 1923
BmrI	ACTGGG	2 cut(s)	1311, 1579
BmsI	GCATC	3 cut(s)	68, 1441, 2079
BmuI	ACTGGG	2 cut(s)	1311, 1579
BpiI	GAAGAC	1 cut(s)	408
BpmI	CTGGAG	1 cut(s)	1776
Bpu1102I	GCTNAGC	1 cut(s)	895
Bpu14I	TTCGAA	1 cut(s)	764
BpuEI	CTTGAG	1 cut(s)	2226
BpuMI	CCSGG	1 cut(s)	1066
BsaI	GGTCTC	2 cut(s)	175, 2056
BsaJI	CCNNGG	8 cut(s)	666, 695, 801, 994, 1065, 1206, 1384, 1761
BsaWI	WCCGGW	1 cut(s)	337
BsaXI	ACNNNNNCTCC	2 cut(s)	1382, 1412
Bsc4I	CCNNNNNNNGG	3 cut(s)	206, 2034, 2072
Bse118I	RCCGGY	2 cut(s)	44, 1809
Bse1I	ACTGG	4 cut(s)	332, 337, 1306, 1574
Bse3DI	GCAATG	2 cut(s)	587, 1637
BseBI	CCWGG	4 cut(s)	696, 996, 1276, 1923
BseDI	CCNNGG	8 cut(s)	666, 695, 801, 994, 1065, 1206, 1384, 1761
BseGI	GGATG	7 cut(s)	10, 59, 130, 385, 562, 1931, 2094
BseLI	CCNNNNNNNGG	3 cut(s)	206, 2034, 2072
BseMI	GCAATG	2 cut(s)	587, 1637
BseMII	CTCAG	1 cut(s)	1118
BseNI	ACTGG	4 cut(s)	332, 337, 1306, 1574
BseRI	GAGGAG	4 cut(s)	137, 979, 1201, 2200
BseXI	GCAGC	3 cut(s)	485, 586, 820
BsgI	GTGCAG	2 cut(s)	827, 1587
Bsh1285I	CGRYCG	1 cut(s)	2106
BshFI	GGCC	2 cut(s)	671, 1813
BshNI	GGYRCC	2 cut(s)	41, 1039
BsiEI	CGRYCG	1 cut(s)	2106
BsiHKAI	GWGCWC	3 cut(s)	183, 1237, 1746
BsiSI	CCGG	5 cut(s)	45, 338, 1065, 1667, 1810
BslFI	GGGAC	2 cut(s)	712, 2254
BslI	CCNNNNNNNGG	3 cut(s)	206, 2034, 2072
BsmAI	GTCTC	4 cut(s)	175, 1163, 1972, 2056
BsmFI	GGGAC	2 cut(s)	712, 2254
BsnI	GGCC	2 cut(s)	671, 1813
Bso31I	GGTCTC	2 cut(s)	175, 2056
Bsp119I	TTCGAA	1 cut(s)	764
Bsp1286I	GDGCHC	3 cut(s)	183, 1237, 1746
Bsp1407I	TGTACA	3 cut(s)	438, 1320, 2172
Bsp143I	GATC	6 cut(s)	1061, 1190, 1639, 1863, 2099, 2164
Bsp1720I	GCTNAGC	1 cut(s)	895
Bsp19I	CCATGG	3 cut(s)	1206, 1384, 1761
BspACI	CCGC	3 cut(s)	106, 371, 2028
BspANI	GGCC	2 cut(s)	671, 1813
BspCNI	CTCAG	1 cut(s)	1119
BspHI	TCATGA	3 cut(s)	1503, 1624, 2058
BspLI	GGNNCC	5 cut(s)	43, 993, 1041, 1063, 1791
BspMAI	CTGCAG	1 cut(s)	604
BspPI	GGATC	4 cut(s)	1056, 1069, 1185, 2107
BspT104I	TTCGAA	1 cut(s)	764
BspT107I	GGYRCC	2 cut(s)	41, 1039
BspTNI	GGTCTC	2 cut(s)	175, 2056
BsrDI	GCAATG	2 cut(s)	587, 1637
BsrFI	RCCGGY	2 cut(s)	44, 1809
BsrGI	TGTACA	3 cut(s)	438, 1320, 2172
BsrI	ACTGG	4 cut(s)	332, 337, 1306, 1574
BssAI	RCCGGY	2 cut(s)	44, 1809
BssECI	CCNNGG	8 cut(s)	666, 695, 801, 994, 1065, 1206, 1384, 1761
BssMI	GATC	6 cut(s)	1061, 1190, 1639, 1863, 2099, 2164
BssT1I	CCWWGG	4 cut(s)	666, 1206, 1384, 1761
Bst2UI	CCWGG	4 cut(s)	696, 996, 1276, 1923
Bst4CI	ACNGT	9 cut(s)	410, 789, 805, 953, 1138, 1256, 1655, 1822, 2137
Bst6I	CTCTTC	1 cut(s)	1732
BstAUI	TGTACA	3 cut(s)	438, 1320, 2172
BstBI	TTCGAA	1 cut(s)	764
BstC8I	GCNNGC	1 cut(s)	1850
BstDEI	CTNAG	5 cut(s)	192, 895, 1127, 1725, 2161
BstDSI	CCRYGG	4 cut(s)	801, 1206, 1384, 1761
BstF5I	GGATG	7 cut(s)	10, 59, 130, 385, 562, 1931, 2094
BstHHI	GCGC	1 cut(s)	243
BstKTI	GATC	6 cut(s)	1064, 1193, 1642, 1866, 2102, 2167
BstMAI	GTCTC	4 cut(s)	175, 1163, 1972, 2056
BstMBI	GATC	6 cut(s)	1061, 1190, 1639, 1863, 2099, 2164
BstMCI	CGRYCG	1 cut(s)	2106
BstMWI	GCNNNNNNNGC	2 cut(s)	238, 2125
BstNI	CCWGG	4 cut(s)	696, 996, 1276, 1923
BstNSI	RCATGY	4 cut(s)	1852, 1894, 2119, 2253
BstSCI	CCNGG	5 cut(s)	694, 994, 1064, 1274, 1921
BstSFI	CTRYAG	1 cut(s)	600
BstV1I	GCAGC	3 cut(s)	485, 586, 820
BstV2I	GAAGAC	1 cut(s)	408
BstX2I	RGATCY	2 cut(s)	1061, 1190
BstYI	RGATCY	2 cut(s)	1061, 1190
BsuRI	GGCC	2 cut(s)	671, 1813
BtgI	CCRYGG	4 cut(s)	801, 1206, 1384, 1761
BtsCI	GGATG	7 cut(s)	10, 59, 130, 385, 562, 1931, 2094
BtsI	GCAGTG	2 cut(s)	1599, 1998
BtsIMutI	CAGTG	5 cut(s)	731, 1599, 1651, 1958, 1998
Cac8I	GCNNGC	1 cut(s)	1850
CciI	TCATGA	3 cut(s)	1503, 1624, 2058
CfoI	GCGC	1 cut(s)	243
Cfr10I	RCCGGY	2 cut(s)	44, 1809
Cfr13I	GGNCC	5 cut(s)	24, 335, 663, 991, 1023
Csp6I	GTAC	9 cut(s)	285, 406, 439, 651, 1040, 1272, 1321, 1344, 2173
CviQI	GTAC	9 cut(s)	285, 406, 439, 651, 1040, 1272, 1321, 1344, 2173
DdeI	CTNAG	5 cut(s)	192, 895, 1127, 1725, 2161
DpnI	GATC	6 cut(s)	1063, 1192, 1641, 1865, 2101, 2166
DpnII	GATC	6 cut(s)	1061, 1190, 1639, 1863, 2099, 2164
DraIII	CACNNNGTG	1 cut(s)	617
Eam1104I	CTCTTC	1 cut(s)	1732
EarI	CTCTTC	1 cut(s)	1732
Ecl136II	GAGCTC	1 cut(s)	181
Eco130I	CCWWGG	4 cut(s)	666, 1206, 1384, 1761
Eco24I	GRGCYC	1 cut(s)	183
Eco31I	GGTCTC	2 cut(s)	175, 2056
Eco32I	GATATC	1 cut(s)	345
Eco47I	GGWCC	5 cut(s)	24, 335, 663, 991, 1023
Eco53kI	GAGCTC	1 cut(s)	181
Eco57I	CTGAAG	5 cut(s)	21, 402, 903, 1428, 2191
EcoICRI	GAGCTC	1 cut(s)	181
EcoO109I	RGGNCCY	1 cut(s)	991
EcoRI	GAATTC	1 cut(s)	1499
EcoRII	CCWGG	4 cut(s)	694, 994, 1274, 1921
EcoRV	GATATC	1 cut(s)	345
EcoT14I	CCWWGG	4 cut(s)	666, 1206, 1384, 1761
EcoT22I	ATGCAT	1 cut(s)	1434
EcoT38I	GRGCYC	1 cut(s)	183
ErhI	CCWWGG	4 cut(s)	666, 1206, 1384, 1761
FaqI	GGGAC	2 cut(s)	712, 2254
Fnu4HI	GCNGC	3 cut(s)	474, 600, 809
FokI	GGATG	7 cut(s)	17, 46, 117, 392, 569, 1938, 2101
FriOI	GRGCYC	1 cut(s)	183
Fsp4HI	GCNGC	3 cut(s)	474, 600, 809
FspBI	CTAG	6 cut(s)	1086, 1721, 1776, 1859, 1982, 2274
GlaI	GCGC	1 cut(s)	242
GluI	GCNGC	3 cut(s)	474, 600, 809
GsuI	CTGGAG	1 cut(s)	1776
HaeIII	GGCC	2 cut(s)	671, 1813
HapII	CCGG	5 cut(s)	45, 338, 1065, 1667, 1810
HhaI	GCGC	1 cut(s)	243
Hin6I	GCGC	1 cut(s)	241
HinP1I	GCGC	1 cut(s)	241
HincII	GTYRAC	1 cut(s)	1414
HindII	GTYRAC	1 cut(s)	1414
HindIII	AAGCTT	2 cut(s)	391, 1473
HinfI	GANTC	5 cut(s)	71, 305, 413, 761, 1070
HpaII	CCGG	5 cut(s)	45, 338, 1065, 1667, 1810
HphI	GGTGA	9 cut(s)	20, 189, 291, 422, 464, 721, 1813, 2095, 2209
Hpy166II	GTNNAC	7 cut(s)	406, 439, 801, 925, 1321, 1414, 2173
Hpy8I	GTNNAC	7 cut(s)	406, 439, 801, 925, 1321, 1414, 2173
HpyAV	CCTTC	6 cut(s)	792, 1204, 1387, 1979, 2090, 2150
HpyCH4III	ACNGT	9 cut(s)	410, 789, 805, 953, 1138, 1256, 1655, 1822, 2137
HpyF10VI	GCNNNNNNNGC	2 cut(s)	238, 2125
HpyF3I	CTNAG	5 cut(s)	192, 895, 1127, 1725, 2161
HspAI	GCGC	1 cut(s)	241
KpnI	GGTACC	1 cut(s)	1043
Kzo9I	GATC	6 cut(s)	1061, 1190, 1639, 1863, 2099, 2164
LmnI	GCTCC	6 cut(s)	425, 966, 1240, 1472, 1795, 1988
Lsp1109I	GCAGC	3 cut(s)	485, 586, 820
LweI	GCATC	3 cut(s)	68, 1441, 2079
MaeI	CTAG	6 cut(s)	1086, 1721, 1776, 1859, 1982, 2274
MaeIII	GTNAC	9 cut(s)	195, 352, 617, 857, 1091, 1250, 1655, 1756, 1805
MalI	GATC	6 cut(s)	1063, 1192, 1641, 1865, 2101, 2166
MboI	GATC	6 cut(s)	1061, 1190, 1639, 1863, 2099, 2164
MboII	GAAGA	9 cut(s)	408, 497, 765, 1749, 1890, 1906, 2009, 2012, 2015
MflI	RGATCY	2 cut(s)	1061, 1190
MhlI	GDGCHC	3 cut(s)	183, 1237, 1746
MlyI	GAGTC	1 cut(s)	422
MmeI	TCCRAC	1 cut(s)	54
Mph1103I	ATGCAT	1 cut(s)	1434
MroXI	GAANNNNTTC	1 cut(s)	1674
MseI	TTAA	6 cut(s)	251, 1220, 1359, 1584, 1935, 2147
MslI	CAYNNNNRTG	2 cut(s)	1592, 2035
MspI	CCGG	5 cut(s)	45, 338, 1065, 1667, 1810
MspR9I	CCNGG	5 cut(s)	696, 996, 1066, 1276, 1923
MvaI	CCWGG	4 cut(s)	696, 996, 1276, 1923
MwoI	GCNNNNNNNGC	2 cut(s)	238, 2125
NciI	CCSGG	1 cut(s)	1066
NcoI	CCATGG	3 cut(s)	1206, 1384, 1761
NdeII	GATC	6 cut(s)	1061, 1190, 1639, 1863, 2099, 2164
NlaIV	GGNNCC	5 cut(s)	43, 993, 1041, 1063, 1791
NmuCI	GTSAC	5 cut(s)	195, 352, 617, 857, 1655
NsiI	ATGCAT	1 cut(s)	1434
NspI	RCATGY	4 cut(s)	1852, 1894, 2119, 2253
NspV	TTCGAA	1 cut(s)	764
PaeI	GCATGC	1 cut(s)	1852
PagI	TCATGA	3 cut(s)	1503, 1624, 2058
PciI	ACATGT	1 cut(s)	1890
PdmI	GAANNNNTTC	1 cut(s)	1674
PfeI	GAWTC	4 cut(s)	71, 305, 761, 1070
PfoI	TCCNGGA	1 cut(s)	1921
PkrI	GCNGC	3 cut(s)	475, 601, 810
PleI	GAGTC	1 cut(s)	421
PpsI	GAGTC	1 cut(s)	421
PpuMI	RGGWCCY	1 cut(s)	991
PscI	ACATGT	1 cut(s)	1890
PsiI	TTATAA	3 cut(s)	270, 705, 1403
Psp124BI	GAGCTC	1 cut(s)	183
Psp5II	RGGWCCY	1 cut(s)	991
Psp6I	CCWGG	4 cut(s)	694, 994, 1274, 1921
PspGI	CCWGG	4 cut(s)	694, 994, 1274, 1921
PspN4I	GGNNCC	5 cut(s)	43, 993, 1041, 1063, 1791
PspPI	GGNCC	5 cut(s)	24, 335, 663, 991, 1023
PspPPI	RGGWCCY	1 cut(s)	991
PstI	CTGCAG	1 cut(s)	604
PsuI	RGATCY	2 cut(s)	1061, 1190
RsaI	GTAC	9 cut(s)	286, 407, 440, 652, 1041, 1273, 1322, 1345, 2174
RsaNI	GTAC	9 cut(s)	285, 406, 439, 651, 1040, 1272, 1321, 1344, 2173
RseI	CAYNNNNRTG	2 cut(s)	1592, 2035
SacI	GAGCTC	1 cut(s)	183
SaqAI	TTAA	6 cut(s)	251, 1220, 1359, 1584, 1935, 2147
SatI	GCNGC	3 cut(s)	474, 600, 809
Sau3AI	GATC	6 cut(s)	1061, 1190, 1639, 1863, 2099, 2164
Sau96I	GGNCC	5 cut(s)	24, 335, 663, 991, 1023
ScaI	AGTACT	1 cut(s)	286
SchI	GAGTC	1 cut(s)	422
ScrFI	CCNGG	5 cut(s)	696, 996, 1066, 1276, 1923
SduI	GDGCHC	3 cut(s)	183, 1237, 1746
SfaNI	GCATC	3 cut(s)	68, 1441, 2079
SfcI	CTRYAG	1 cut(s)	600
SfuI	TTCGAA	1 cut(s)	764
SgrAI	CRCCGGYG	1 cut(s)	44
SinI	GGWCC	5 cut(s)	24, 335, 663, 991, 1023
SmiMI	CAYNNNNRTG	2 cut(s)	1592, 2035
SmlI	CTYRAG	1 cut(s)	2241
SmoI	CTYRAG	1 cut(s)	2241
SphI	GCATGC	1 cut(s)	1852
SsiI	CCGC	3 cut(s)	106, 371, 2028
SspI	AATATT	2 cut(s)	1547, 1675
SspMI	CTAG	6 cut(s)	1086, 1721, 1776, 1859, 1982, 2274
SstI	GAGCTC	1 cut(s)	183
StyD4I	CCNGG	5 cut(s)	694, 994, 1064, 1274, 1921
StyI	CCWWGG	4 cut(s)	666, 1206, 1384, 1761
TaaI	ACNGT	9 cut(s)	410, 789, 805, 953, 1138, 1256, 1655, 1822, 2137
TaqI	TCGA	6 cut(s)	522, 764, 1636, 1642, 1876, 2106
TaqII	GACCGA	2 cut(s)	157, 2092
TatI	WGTACW	5 cut(s)	284, 438, 650, 1320, 2172
TfiI	GAWTC	4 cut(s)	71, 305, 761, 1070
Tru1I	TTAA	6 cut(s)	251, 1220, 1359, 1584, 1935, 2147
Tru9I	TTAA	6 cut(s)	251, 1220, 1359, 1584, 1935, 2147
TscAI	CASTG	5 cut(s)	731, 1599, 1658, 1965, 1998
TseFI	GTSAC	5 cut(s)	195, 352, 617, 857, 1655
TseI	GCWGC	3 cut(s)	473, 599, 808
Tsp45I	GTSAC	5 cut(s)	195, 352, 617, 857, 1655
TspRI	CASTG	5 cut(s)	731, 1599, 1658, 1965, 1998
VpaK11BI	GGWCC	5 cut(s)	24, 335, 663, 991, 1023
XapI	RAATTY	8 cut(s)	53, 535, 630, 833, 1243, 1279, 1499, 1690
XceI	RCATGY	4 cut(s)	1852, 1894, 2119, 2253
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1033
XmnI	GAANNNNTTC	1 cut(s)	1674
XspI	CTAG	6 cut(s)	1086, 1721, 1776, 1859, 1982, 2274
ZrmI	AGTACT	1 cut(s)	286
Zsp2I	ATGCAT	1 cut(s)	1434

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.