RchiOBHm_Chr2g0084511

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0012415
Physical Location & Seq
Forward (+)
250072 .. 252344
2273 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46010

Sequence Viewer

Length: 2046 bp
ATGGGTAGTTTTGGTAAAGTGAAAGTGTGTTTCCCTTCCCCTCCGTTAGATTTTGAAATTCAGATCTCTGCAAAGTCAGAAACAGAGAGTGAGGCTATTATGAACCGATCGTTGTCGTCAAAGGCGGCGAAGAAGCCGTCTCCGGCGCCGGCGAAGAAGAACAAAAAAGAGCAGAGCCTTCGAAACCCGTTGCAGGATCTCAATGTCATTAGTACTAGCAACCATGGGAGCGAGGCATCTTCTTCTTCAATGTCCATCGAAGCCCCACGAGGTTGCCTCAGGTTCTTTCTCTCTCACTCCTCTTCCTCTAATTTAAAAACCCCTATACGCACACGCACCAGCACCAGGCCTAAAACTCTCTCCAAAACCCCTAAATCAGCTCCTCTTGTGAGGCCTCCTAAGGACAACCCCTCCAATTCCAAATGCAATGTTTCCAAACACAACCCACAGAAATCAAAATTCAAGACTAGTTCTTCTTGCTTGTATCACTGGCAGCCTGGGAACCTACCTAGTTGTAGGAATGGGCTCAAGTTGAAAGCTTGTCCAGCTTTGAACTCGAAAGGCAAATCCTTTGAACAAAGGGTAGTTAATGATGATGATGTAGGTCAACCCAATGAGCTTAAGTCAGGTTCTAGTGATGATGCAACTTTTACTCCCTTATGTAAGATACCTACCGGGTTGGGTTTGGACCGCAAAGTCGATAACACTGAGGATGTGCAACAGAATTCTGACGACAAGAGTAATAGTACAACTCCTCCTGTTCAGGCCTCTGTGTCTCCAGAGATACAATTTGGATCCTCTGCCGTGTCGTCAGCCTCGCTGGCTTGTTATGCTGCAGGCCATGTTCTTTCGGGGGTCGCTGACAAGAGGAAGTGCAGACCTAGGGGAATTCTCAATGTAGGCGAGAATGATTCAGGCTTTGGGAAAGGGAAGGCTTTATGCAGTTTTGAGGAAGTGGTGGAGGATGACGATGCCACTGGCAAAGGAATGGTTGGAGATCCTGATGCTTCTATGGTTCCCTTACCTACTGAAGCTTCAATGCATTGGATTTTATCACCATGTAATGAGGAAGATGAGGATCACAAGGAGCATTCTGAATCTAGTTTTCAGAATCCTGCAGGGTCCCCCAATAGTGGTCGTGAATTCTCGTCAGATGTATGCTGCCATAACAACTATGAAAGCACTACTTGCCGTAGCAGGAGGAATACTTCCATTTCTCCTAGTGGAGTTCCTAAGTTTCAAGAATTTAACAATGAGCATGTGCCTGTTTTGTCTTCTCCGCCTTCTACACCTGGTTGTGAGGCTCTACCCTTGAAAGATGAAAGACAATACATTTATGAGTTTGATGCAGAGAATTCTCCGTTTTCTCTGGCTTCACTGAGTAGTGGGAATGTTATTCTTACACCTCAATCAGACTCTAGTGCAGATAGACATGCTGGCCTGTCCTGGTCTAATACAGACAACCATAGGAAACACTATGATTCTGAACTCAGTTCAGTGGCTGAAGCTATTCGGATGGCAAGCTTGTCTCCAAACCGTCATGAACTGATTGAGGATCAGATTGATTCAAGTTTCCAATTTGATTGTCTAACTACAACTTGTAATTCGATCAGTCGAATCCAGAAAATGTTGGATGATCAGGCTCCCTGGCATTCCAACTCCACTTTAGAGAATGTGTCACAATCCCAGCTGAGGATATCATGGAGAGAAGGGTTAATGAGCCGTATGCATGACATGGATGAATATGATTGCTGCAGATGTTTATCAGACGAAGAGGAAGATATCAATGGCTGCAGCAATGACCTTCCCAAAACGTCCTGTCTAAGTCCTGAAATCACCAACAATGTTGAGGCAGATCAGATTTTAACTGATACTTCCTGGTCTGCTGATATACTGGATGATGAACCAGGAGTTGCGGGAAAAGTTAAAGAAGACTTTCCTCCTCAATCATGTGCCGAGTCCATAAGCACTGATGGAGGCGGCCTGCTTGCTTCAGGGGATTCAGACTGGAATCTCTGCTACAAGAATGAGCTGTTCCATGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

681

Amino Acids

74.13

Weight (kDa)

5.22

Isoelectric Point (pI)

61.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012415)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G43990
fragaria_vesca FvH4_1g00220
malus_domestica MD00G1086900.v1.1 MD15G1142800.v1.1
prunus_persica Prupe.7G270200_v2.0.a1 Prupe.7G270200_v2.0.a1
pyrus_communis pycom15g12890 pycom290g00170
rosa_chinensis RchiOBHm_Chr2g0084511
rosa_laevigata RLG00000015623
rosa_multiflora Rmu_co8107158.1_g000001 Rmu_sc0009647.1_g000004
rosa_roxburghii Rroxscaffold_2G00156000
rosa_rugosa Rorug01G0454600
rosa_samantha Rh2AG002700 Rh2BG002300 Rh2CG002800 Rh2DG002800
rosa_wichuraiana Rw2G000240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 695
AccB1I GGYRCC 1 cut(s) 145
AciI CCGC 5 cut(s) 125, 691, 1280, 1916, 1980
AclWI GGATC 6 cut(s) 204, 789, 802, 992, 1086, 1563
AcsI RAATTY 7 cut(s) 57, 458, 724, 888, 1142, 1244, 1354
AcuI CTGAAG 3 cut(s) 1050, 1524, 1977
AcyI GRCGYC 1 cut(s) 146
AfaI GTAC 2 cut(s) 214, 748
AfiI CCNNNNNNNGG 4 cut(s) 193, 345, 1133, 1692
AflII CTTAAG 1 cut(s) 620
AhlI ACTAGT 1 cut(s) 467
AjnI CCWGG 7 cut(s) 344, 496, 1291, 1445, 1646, 1877, 1906
AluBI AGCT 9 cut(s) 380, 539, 548, 619, 1034, 1508, 1524, 1690, 2032
AluI AGCT 9 cut(s) 380, 539, 548, 619, 1034, 1508, 1524, 1690, 2032
Alw26I GTCTC 3 cut(s) 144, 780, 1533
AlwI GGATC 6 cut(s) 204, 789, 802, 992, 1086, 1563
AlwNI CAGNNNCTG 1 cut(s) 1502
AoxI GGCC 6 cut(s) 347, 392, 765, 838, 1438, 1981
ApeKI GCWGC 6 cut(s) 493, 833, 1161, 1752, 1791, 1794
ApoI RAATTY 7 cut(s) 57, 458, 724, 888, 1142, 1244, 1354
ArsI GACNNNNNNTTYG 2 cut(s) 122, 154
Asp700I GAANNNNTTC 2 cut(s) 1509, 1935
AspA2I CCTAGG 1 cut(s) 881
AspLEI GCGC 1 cut(s) 148
AspS9I GGNCC 2 cut(s) 688, 1122
AsuC2I CCSGG 1 cut(s) 676
AsuHPI GGTGA 2 cut(s) 1047, 1828
AsuII TTCGAA 1 cut(s) 181
AvaII GGWCC 2 cut(s) 688, 1122
AvrII CCTAGG 1 cut(s) 881
AxyI CCTNAGG 2 cut(s) 278, 399
BamHI GGATCC 1 cut(s) 794
BanI GGYRCC 1 cut(s) 145
BanII GRGCYC 1 cut(s) 528
BauI CACGAG 1 cut(s) 267
BbsI GAAGAC 2 cut(s) 1266, 1938
BbvCI CCTCAGC 1 cut(s) 1691
BbvI GCAGC 6 cut(s) 505, 820, 1148, 1739, 1778, 1806
BccI CCATC 3 cut(s) 263, 1510, 1967
BceAI ACGGC 4 cut(s) 121, 788, 1176, 1707
BcgI CGANNNNNNTGC 2 cut(s) 161, 195
BciT130I CCWGG 7 cut(s) 346, 498, 1293, 1447, 1648, 1879, 1908
BclI TGATCA 1 cut(s) 1636
BcnI CCSGG 1 cut(s) 676
BcoDI GTCTC 3 cut(s) 144, 780, 1533
BcuI ACTAGT 1 cut(s) 467
BfaI CTAG 8 cut(s) 216, 468, 510, 633, 882, 1101, 1221, 1419
BfmI CTRYAG 4 cut(s) 834, 1116, 1753, 1792
BfoI RGCGCY 1 cut(s) 149
BfrI CTTAAG 1 cut(s) 620
BglI GCCNNNNNGGC 1 cut(s) 821
BglII AGATCT 1 cut(s) 63
BisI GCNGC 8 cut(s) 126, 494, 834, 1162, 1753, 1792, 1795, 1981
BlnI CCTAGG 1 cut(s) 881
BlsI GCNGC 8 cut(s) 127, 495, 835, 1163, 1754, 1793, 1796, 1982
BmcAI AGTACT 1 cut(s) 214
Bme1390I CCNGG 8 cut(s) 346, 498, 676, 1293, 1447, 1648, 1879, 1908
Bme18I GGWCC 2 cut(s) 688, 1122
BmgT120I GGNCC 2 cut(s) 688, 1122
BmiI GGNNCC 7 cut(s) 147, 503, 796, 1017, 1123, 1124, 1644
BmrFI CCNGG 8 cut(s) 346, 498, 676, 1293, 1447, 1648, 1879, 1908
BmsI GCATC 5 cut(s) 245, 631, 961, 994, 1336
BpiI GAAGAC 2 cut(s) 1266, 1938
BplI GAGNNNNNCTC 2 cut(s) 261, 293
BpmI CTGGAG 1 cut(s) 762
Bpu10I CCTNAGC 1 cut(s) 1691
Bpu14I TTCGAA 1 cut(s) 181
BpuEI CTTGAG 1 cut(s) 512
BpuMI CCSGG 1 cut(s) 676
BsaBI GATNNNNATC 2 cut(s) 1077, 1762
BsaHI GRCGYC 1 cut(s) 146
BsaJI CCNNGG 4 cut(s) 223, 497, 881, 1646
BsaXI ACNNNNNCTCC 6 cut(s) 395, 425, 637, 667, 739, 769
Bsc4I CCNNNNNNNGG 4 cut(s) 193, 345, 1133, 1692
Bse118I RCCGGY 1 cut(s) 148
Bse1I ACTGG 4 cut(s) 494, 982, 1899, 2012
Bse21I CCTNAGG 2 cut(s) 278, 399
Bse3DI GCAATG 2 cut(s) 433, 1804
Bse8I GATNNNNATC 2 cut(s) 1077, 1762
BseBI CCWGG 7 cut(s) 346, 498, 1293, 1447, 1648, 1879, 1908
BseDI CCNNGG 4 cut(s) 223, 497, 881, 1646
BseGI GGATG 6 cut(s) 718, 970, 1521, 1639, 1744, 1903
BseJI GATNNNNATC 2 cut(s) 1077, 1762
BseLI CCNNNNNNNGG 4 cut(s) 193, 345, 1133, 1692
BseMI GCAATG 2 cut(s) 433, 1804
BseMII CTCAG 5 cut(s) 292, 699, 1370, 1504, 1682
BseNI ACTGG 4 cut(s) 494, 982, 1899, 2012
BseRI GAGGAG 4 cut(s) 289, 372, 744, 1932
BseXI GCAGC 6 cut(s) 505, 820, 1148, 1739, 1778, 1806
BseYI CCCAGC 1 cut(s) 1686
BsgI GTGCAG 2 cut(s) 895, 1443
Bsh1285I CGRYCG 1 cut(s) 110
BshFI GGCC 6 cut(s) 349, 394, 767, 840, 1440, 1983
BshNI GGYRCC 1 cut(s) 145
BsiEI CGRYCG 1 cut(s) 110
BsiSI CCGG 3 cut(s) 143, 149, 675
BslFI GGGAC 1 cut(s) 1108
BslI CCNNNNNNNGG 4 cut(s) 193, 345, 1133, 1692
BsmAI GTCTC 3 cut(s) 144, 780, 1533
BsmBI CGTCTC 1 cut(s) 144
BsmFI GGGAC 1 cut(s) 1108
BsmI GAATGC 2 cut(s) 1090, 1651
BsnI GGCC 6 cut(s) 349, 394, 767, 840, 1440, 1983
Bsp119I TTCGAA 1 cut(s) 181
Bsp1286I GDGCHC 1 cut(s) 528
Bsp19I CCATGG 1 cut(s) 223
BspACI CCGC 5 cut(s) 125, 691, 1280, 1916, 1980
BspANI GGCC 6 cut(s) 349, 394, 767, 840, 1440, 1983
BspCNI CTCAG 5 cut(s) 291, 700, 1371, 1503, 1683
BspHI TCATGA 1 cut(s) 1540
BspLI GGNNCC 7 cut(s) 147, 503, 796, 1017, 1123, 1124, 1644
BspMAI CTGCAG 4 cut(s) 838, 1120, 1757, 1796
BspPI GGATC 6 cut(s) 204, 789, 802, 992, 1086, 1563
BspT104I TTCGAA 1 cut(s) 181
BspT107I GGYRCC 1 cut(s) 145
BspTI CTTAAG 1 cut(s) 620
BsrDI GCAATG 2 cut(s) 433, 1804
BsrFI RCCGGY 1 cut(s) 148
BsrI ACTGG 4 cut(s) 494, 982, 1899, 2012
BssAI RCCGGY 1 cut(s) 148
BssECI CCNNGG 4 cut(s) 223, 497, 881, 1646
BssNI GRCGYC 1 cut(s) 146
BssSI CACGAG 1 cut(s) 267
BssT1I CCWWGG 2 cut(s) 223, 881
Bst2BI CACGAG 1 cut(s) 267
Bst2UI CCWGG 7 cut(s) 346, 498, 1293, 1447, 1648, 1879, 1908
Bst4CI ACNGT 1 cut(s) 1538
Bst6I CTCTTC 2 cut(s) 307, 1767
BstACI GRCGYC 1 cut(s) 146
BstAFI CTTAAG 1 cut(s) 620
BstAPI GCANNNNNTGC 1 cut(s) 1188
BstBI TTCGAA 1 cut(s) 181
BstC8I GCNNGC 7 cut(s) 150, 822, 838, 1438, 1522, 1985, 1989
BstDEI CTNAG 8 cut(s) 278, 399, 708, 1233, 1379, 1490, 1691, 1823
BstDSI CCRYGG 1 cut(s) 223
BstF5I GGATG 6 cut(s) 718, 970, 1521, 1639, 1744, 1903
BstH2I RGCGCY 1 cut(s) 149
BstHHI GCGC 1 cut(s) 148
BstMAI GTCTC 3 cut(s) 144, 780, 1533
BstMCI CGRYCG 1 cut(s) 110
BstMWI GCNNNNNNNGC 4 cut(s) 545, 821, 830, 1188
BstNI CCWGG 7 cut(s) 346, 498, 1293, 1447, 1648, 1879, 1908
BstNSI RCATGY 2 cut(s) 1262, 1436
BstSCI CCNGG 8 cut(s) 344, 496, 674, 1291, 1445, 1646, 1877, 1906
BstSFI CTRYAG 4 cut(s) 834, 1116, 1753, 1792
BstV1I GCAGC 6 cut(s) 505, 820, 1148, 1739, 1778, 1806
BstV2I GAAGAC 2 cut(s) 1266, 1938
BstX2I RGATCY 4 cut(s) 63, 196, 794, 997
BstYI RGATCY 4 cut(s) 63, 196, 794, 997
Bsu36I CCTNAGG 2 cut(s) 278, 399
BsuRI GGCC 6 cut(s) 349, 394, 767, 840, 1440, 1983
BtgI CCRYGG 1 cut(s) 223
BtsCI GGATG 6 cut(s) 718, 970, 1521, 1639, 1744, 1903
BtsIMutI CAGTG 6 cut(s) 487, 705, 975, 1376, 1503, 1968
Cac8I GCNNGC 7 cut(s) 150, 822, 838, 1438, 1522, 1985, 1989
CaiI CAGNNNCTG 1 cut(s) 1502
CciI TCATGA 1 cut(s) 1540
CfoI GCGC 1 cut(s) 148
Cfr10I RCCGGY 1 cut(s) 148
Cfr13I GGNCC 2 cut(s) 688, 1122
CsiI ACCWGGT 1 cut(s) 1291
Csp6I GTAC 2 cut(s) 213, 747
CviQI GTAC 2 cut(s) 213, 747
DdeI CTNAG 8 cut(s) 278, 399, 708, 1233, 1379, 1490, 1691, 1823
DinI GGCGCC 1 cut(s) 147
DraI TTTAAA 1 cut(s) 315
DrdI GACNNNNNNGTC 1 cut(s) 695
DseDI GACNNNNNNGTC 1 cut(s) 695
Eam1104I CTCTTC 2 cut(s) 307, 1767
EarI CTCTTC 2 cut(s) 307, 1767
EciI GGCGGA 1 cut(s) 1269
Eco130I CCWWGG 2 cut(s) 223, 881
Eco147I AGGCCT 3 cut(s) 349, 394, 767
Eco24I GRGCYC 1 cut(s) 528
Eco32I GATATC 2 cut(s) 1698, 1783
Eco47I GGWCC 2 cut(s) 688, 1122
Eco57I CTGAAG 3 cut(s) 1050, 1524, 1977
Eco81I CCTNAGG 2 cut(s) 278, 399
EcoO109I RGGNCCY 1 cut(s) 1122
EcoRI GAATTC 4 cut(s) 724, 888, 1142, 1354
EcoRII CCWGG 7 cut(s) 344, 496, 1291, 1445, 1646, 1877, 1906
EcoRV GATATC 2 cut(s) 1698, 1783
EcoT14I CCWWGG 2 cut(s) 223, 881
EcoT22I ATGCAT 2 cut(s) 1044, 1731
EcoT38I GRGCYC 1 cut(s) 528
EgeI GGCGCC 1 cut(s) 147
EheI GGCGCC 1 cut(s) 147
ErhI CCWWGG 2 cut(s) 223, 881
Esp3I CGTCTC 1 cut(s) 144
FalI AAGNNNNNCTT 2 cut(s) 1171, 1203
FaqI GGGAC 1 cut(s) 1108
FauI CCCGC 1 cut(s) 1909
FbaI TGATCA 1 cut(s) 1636
Fnu4HI GCNGC 8 cut(s) 126, 494, 834, 1162, 1753, 1792, 1795, 1981
FokI GGATG 6 cut(s) 725, 977, 1528, 1646, 1751, 1910
FriOI GRGCYC 1 cut(s) 528
Fsp4HI GCNGC 8 cut(s) 126, 494, 834, 1162, 1753, 1792, 1795, 1981
FspBI CTAG 8 cut(s) 216, 468, 510, 633, 882, 1101, 1221, 1419
GlaI GCGC 1 cut(s) 147
GluI GCNGC 8 cut(s) 126, 494, 834, 1162, 1753, 1792, 1795, 1981
GsaI CCCAGC 1 cut(s) 1690
GsuI CTGGAG 1 cut(s) 762
HaeII RGCGCY 1 cut(s) 149
HaeIII GGCC 6 cut(s) 349, 394, 767, 840, 1440, 1983
HapII CCGG 3 cut(s) 143, 149, 675
HhaI GCGC 1 cut(s) 148
Hin1I GRCGYC 1 cut(s) 146
Hin6I GCGC 1 cut(s) 146
HinP1I GCGC 1 cut(s) 146
HincII GTYRAC 1 cut(s) 608
HindII GTYRAC 1 cut(s) 608
HindIII AAGCTT 3 cut(s) 537, 1032, 1522
HpaII CCGG 3 cut(s) 143, 149, 675
HphI GGTGA 2 cut(s) 1047, 1828
Hpy166II GTNNAC 1 cut(s) 608
Hpy188III TCNNGA 8 cut(s) 463, 779, 1001, 1139, 1241, 1541, 1621, 1829
Hpy8I GTNNAC 1 cut(s) 608
HpyAV CCTTC 6 cut(s) 45, 188, 925, 1293, 1703, 1814
HpyCH4III ACNGT 1 cut(s) 1538
HpyCH4IV ACGT 1 cut(s) 1814
HpyF10VI GCNNNNNNNGC 4 cut(s) 545, 821, 830, 1188
HpyF3I CTNAG 8 cut(s) 278, 399, 708, 1233, 1379, 1490, 1691, 1823
HpySE526I ACGT 1 cut(s) 1814
Hsp92I GRCGYC 1 cut(s) 146
HspAI GCGC 1 cut(s) 146
KasI GGCGCC 1 cut(s) 145
KflI GGGWCCC 1 cut(s) 1122
KroI GCCGGC 1 cut(s) 148
KroNI GCCGGC 1 cut(s) 150
Ksp22I TGATCA 1 cut(s) 1636
LmnI GCTCC 4 cut(s) 228, 385, 1087, 1648
Lsp1109I GCAGC 6 cut(s) 505, 820, 1148, 1739, 1778, 1806
LweI GCATC 5 cut(s) 245, 631, 961, 994, 1336
MabI ACCWGGT 1 cut(s) 1291
MaeI CTAG 8 cut(s) 216, 468, 510, 633, 882, 1101, 1221, 1419
MaeII ACGT 1 cut(s) 1814
MaeIII GTNAC 1 cut(s) 1677
MflI RGATCY 4 cut(s) 63, 196, 794, 997
MhlI GDGCHC 1 cut(s) 528
Mly113I GGCGCC 1 cut(s) 146
MlyI GAGTC 2 cut(s) 1409, 1967
MmeI TCCRAC 3 cut(s) 973, 1611, 1680
Mph1103I ATGCAT 2 cut(s) 1044, 1731
MreI CGCCGGCG 1 cut(s) 148
MroNI GCCGGC 1 cut(s) 148
MroXI GAANNNNTTC 2 cut(s) 1509, 1935
MseI TTAA 8 cut(s) 314, 588, 621, 1248, 1715, 1865, 1926, 2044
MspA1I CMGCKG 1 cut(s) 1690
MspCI CTTAAG 1 cut(s) 620
MspI CCGG 3 cut(s) 143, 149, 675
MspR9I CCNGG 8 cut(s) 346, 498, 676, 1293, 1447, 1648, 1879, 1908
Mva1269I GAATGC 2 cut(s) 1090, 1651
MvaI CCWGG 7 cut(s) 346, 498, 1293, 1447, 1648, 1879, 1908
MwoI GCNNNNNNNGC 4 cut(s) 545, 821, 830, 1188
NaeI GCCGGC 1 cut(s) 150
NarI GGCGCC 1 cut(s) 146
NciI CCSGG 1 cut(s) 676
NcoI CCATGG 1 cut(s) 223
NgoMIV GCCGGC 1 cut(s) 148
NlaIV GGNNCC 7 cut(s) 147, 503, 796, 1017, 1123, 1124, 1644
NmeAIII GCCGAG 1 cut(s) 1981
NmuCI GTSAC 1 cut(s) 1677
NsiI ATGCAT 2 cut(s) 1044, 1731
NspI RCATGY 2 cut(s) 1262, 1436
NspV TTCGAA 1 cut(s) 181
PagI TCATGA 1 cut(s) 1540
PceI AGGCCT 3 cut(s) 349, 394, 767
PctI GAATGC 2 cut(s) 1090, 1651
PdiI GCCGGC 1 cut(s) 150
PdmI GAANNNNTTC 2 cut(s) 1509, 1935
PfeI GAWTC 8 cut(s) 911, 1097, 1111, 1481, 1565, 1617, 2000, 2011
PkrI GCNGC 8 cut(s) 127, 495, 835, 1163, 1754, 1793, 1796, 1982
Ple19I CGATCG 1 cut(s) 110
PleI GAGTC 2 cut(s) 1409, 1966
PluTI GGCGCC 1 cut(s) 149
PpsI GAGTC 2 cut(s) 1409, 1966
PpuMI RGGWCCY 1 cut(s) 1122
Psp5II RGGWCCY 1 cut(s) 1122
Psp6I CCWGG 7 cut(s) 344, 496, 1291, 1445, 1646, 1877, 1906
PspFI CCCAGC 1 cut(s) 1686
PspGI CCWGG 7 cut(s) 344, 496, 1291, 1445, 1646, 1877, 1906
PspN4I GGNNCC 7 cut(s) 147, 503, 796, 1017, 1123, 1124, 1644
PspPI GGNCC 2 cut(s) 688, 1122
PspPPI RGGWCCY 1 cut(s) 1122
PstI CTGCAG 4 cut(s) 838, 1120, 1757, 1796
PstNI CAGNNNCTG 1 cut(s) 1502
PsuI RGATCY 4 cut(s) 63, 196, 794, 997
PvuI CGATCG 1 cut(s) 110
PvuII CAGCTG 1 cut(s) 1690
RsaI GTAC 2 cut(s) 214, 748
RsaNI GTAC 2 cut(s) 213, 747
SaqAI TTAA 8 cut(s) 314, 588, 621, 1248, 1715, 1865, 1926, 2044
SatI GCNGC 8 cut(s) 126, 494, 834, 1162, 1753, 1792, 1795, 1981
Sau96I GGNCC 2 cut(s) 688, 1122
SbfI CCTGCAGG 1 cut(s) 1120
ScaI AGTACT 1 cut(s) 214
SchI GAGTC 2 cut(s) 1409, 1967
ScrFI CCNGG 8 cut(s) 346, 498, 676, 1293, 1447, 1648, 1879, 1908
SdaI CCTGCAGG 1 cut(s) 1120
SduI GDGCHC 1 cut(s) 528
SexAI ACCWGGT 1 cut(s) 1291
SfaNI GCATC 5 cut(s) 245, 631, 961, 994, 1336
SfcI CTRYAG 4 cut(s) 834, 1116, 1753, 1792
SfoI GGCGCC 1 cut(s) 147
SfuI TTCGAA 1 cut(s) 181
SgrAI CRCCGGYG 1 cut(s) 148
SinI GGWCC 2 cut(s) 688, 1122
SmlI CTYRAG 2 cut(s) 527, 620
SmoI CTYRAG 2 cut(s) 527, 620
SpeI ACTAGT 1 cut(s) 467
Sse8387I CCTGCAGG 1 cut(s) 1120
SseBI AGGCCT 3 cut(s) 349, 394, 767
SsiI CCGC 5 cut(s) 125, 691, 1280, 1916, 1980
SspDI GGCGCC 1 cut(s) 145
SspMI CTAG 8 cut(s) 216, 468, 510, 633, 882, 1101, 1221, 1419
StuI AGGCCT 3 cut(s) 349, 394, 767
StyD4I CCNGG 8 cut(s) 344, 496, 674, 1291, 1445, 1646, 1877, 1906
StyI CCWWGG 2 cut(s) 223, 881
TaaI ACNGT 1 cut(s) 1538
TaiI ACGT 1 cut(s) 1817
TaqI TCGA 6 cut(s) 181, 258, 557, 699, 1607, 1615
TatI WGTACW 2 cut(s) 212, 746
TauI GCSGC 2 cut(s) 128, 1983
TfiI GAWTC 8 cut(s) 911, 1097, 1111, 1481, 1565, 1617, 2000, 2011
Tru1I TTAA 8 cut(s) 314, 588, 621, 1248, 1715, 1865, 1926, 2044
Tru9I TTAA 8 cut(s) 314, 588, 621, 1248, 1715, 1865, 1926, 2044
TscAI CASTG 6 cut(s) 494, 712, 982, 1383, 1503, 1975
TseFI GTSAC 1 cut(s) 1677
TseI GCWGC 6 cut(s) 493, 833, 1161, 1752, 1791, 1794
Tsp45I GTSAC 1 cut(s) 1677
TspDTI ATGAA 6 cut(s) 116, 1191, 1335, 1557, 1755, 1917
TspGWI ACGGA 2 cut(s) 33, 1350
TspRI CASTG 6 cut(s) 494, 712, 982, 1383, 1503, 1975
Vha464I CTTAAG 1 cut(s) 620
VpaK11BI GGWCC 2 cut(s) 688, 1122
XapI RAATTY 7 cut(s) 57, 458, 724, 888, 1142, 1244, 1354
XceI RCATGY 2 cut(s) 1262, 1436
XmaJI CCTAGG 1 cut(s) 881
XmnI GAANNNNTTC 2 cut(s) 1509, 1935
XspI CTAG 8 cut(s) 216, 468, 510, 633, 882, 1101, 1221, 1419
ZrmI AGTACT 1 cut(s) 214
Zsp2I ATGCAT 2 cut(s) 1044, 1731
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.