MD00G1086900.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0012415
Physical Location & Seq
Reverse (-)
17757205 .. 17758785
1581 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1086900.v1.1.491

Sequence Viewer

Length: 1581 bp
ATGAACGGATCGTTGTCGTCAAAGCTCACCAAGAAAGCCTCTCCGGCACCGCCACTGGCGACGGCGAACAAGAAGAAGAAGAAACTAAACGAGCAGAGCCCTCGAAATCCACTACGGGATCTCAATGCCATCACCGTTCGCAGTAGCAACAATGGCAGCGATGCTTCGTCTTCCATCTCCGTCGAAGCCCCGCGAGGTTGCCTCAGGTTCTTTCTCTCTCATTCTTCTTCCTCTAATTCCAAAACCCCTCTTTACACACCTAAAAATCTGTCCAAAGCCCCTAAATCAGCTCCTGCTGTGAGGCCTTCAAGACCATCAAAAGCCAAGGACAACCGGTCCAAATTCAATGCTTTGAAAAACCCAGAGAAACCCACCTCACGAAATGCAAGTAAATCTAAGAATAATTCTTCTTGCTTGTACCAGTGGCAGTCTGGAAACAAACCCACTTCTAGAAACGGACCAAAGCTGAAAACTTGTTCACTTGTAAAATCAAATGTAAGTTCCCTGAGTAAGTTAGAGTCTGGGTCTGAGGTAGAAAGTAGTATTGTCAGGGTGGTGGGCAATGCAGGTCAGCCCACTGAGCTCAAATCACGTGGTATTGATGGAGATTTTACACCTTTGAGTAAGATACCGACTGGGTTGGGTTTGGACTCCAAGGCTGATAACTCTGAGGATGTGCTGGAGAATTCTGACAAATCTAATAGTAAAACTCCACCTGTTCAGGCCTCCGTGTCTCCAGAGATACAATGTGGATCATCTGCGGTGTCAAGGAGCATACTTGCTCTTTATGCTGCTGGCCATGTTCTTTCAGGGATCACTGACAAGAGGAAGTGCAGAGCTAGAGGAATTCTCAGTGTAGGAGAAAATGATTCAGGCTTCAGTAAAGGGATGGCTTTAGGTAGCTTTGAGGATGACGATGATGACGAAAGTGGTCAATGTGAAGGCCATGTTGGCAATCTCGATGCTTCTGCGGTTCCTTTACCTACTGAAGCTTCAATGCATTGGCTTTTATCGCCGTGTGATGAAGGGGATGAGGATCACAAGGAGCATTCCGATAGTAGCTTACATAATTCTGCAGGGTCCGTTAATCTTTGTTCTCCATTTTCAACCTTAGGTCGTCATGGATTTTCTCCAAGTTTTCAACAAGTGTTGGAGCCCTTAAATGAGCATGTTGGTGTTATGTCTTCTCTGCATCGCATGCCTGGTTGTGAGGCTGTAAACTTCTTGGAAGAGGAAAGAAAACACCATTATGGTTATGACGATGATAATTCTCCGTTCTCTATGGTTTTACTGGACAGTGGCAATGTTATCTGTACTCCTCAATCAGACTCGAGTGTAGAAAATCATAGGAAACACTGCTTTGATCCTGAACTGAGTTCAGTGGCTGAAGCTATTCAGATGGTAAACTTGTCCCCAAACACGAACAGTCATGTATTAATTGAGGATCAGATTGATTCGAGTTTCCAGTTTGACTGTCTAACCACAGCCTGTGATTCAATCAGCCGATTCCATAAAGTTTTGGATGATCGCGCTTCCTGGCTCTCCAACTCTACACTAGAGAATTATCACAATCGGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

527

Amino Acids

56.76

Weight (kDa)

6.79

Isoelectric Point (pI)

55.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012415)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G43990
fragaria_vesca FvH4_1g00220
malus_domestica MD00G1086900.v1.1 MD15G1142800.v1.1
prunus_persica Prupe.7G270200_v2.0.a1 Prupe.7G270200_v2.0.a1
pyrus_communis pycom15g12890 pycom290g00170
rosa_chinensis RchiOBHm_Chr2g0084511
rosa_laevigata RLG00000015623
rosa_multiflora Rmu_co8107158.1_g000001 Rmu_sc0009647.1_g000004
rosa_roxburghii Rroxscaffold_2G00156000
rosa_rugosa Rorug01G0454600
rosa_samantha Rh2AG002700 Rh2BG002300 Rh2CG002800 Rh2DG002800
rosa_wichuraiana Rw2G000240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 557
AccB1I GGYRCC 1 cut(s) 46
AccII CGCG 2 cut(s) 193, 1530
AciI CCGC 4 cut(s) 50, 191, 761, 971
AclWI GGATC 7 cut(s) 16, 126, 760, 821, 1044, 1358, 1452
AcoI YGGCCR 1 cut(s) 796
AcsI RAATTY 3 cut(s) 341, 685, 846
AcuI CTGAAG 3 cut(s) 862, 1008, 1407
AcvI CACGTG 1 cut(s) 593
AfaI GTAC 2 cut(s) 419, 1315
AgeI ACCGGT 1 cut(s) 333
AgsI TTSAA 7 cut(s) 309, 346, 355, 996, 1107, 1142, 1497
AhdI GACNNNNNGTC 1 cut(s) 334
AjnI CCWGG 2 cut(s) 1201, 1535
AjuI GAANNNNNNNTTGG 2 cut(s) 933, 965
AluBI AGCT 9 cut(s) 25, 290, 466, 583, 839, 903, 992, 1062, 1391
AluI AGCT 9 cut(s) 25, 290, 466, 583, 839, 903, 992, 1062, 1391
Alw21I GWGCWC 1 cut(s) 585
Alw26I GTCTC 1 cut(s) 738
AlwI GGATC 7 cut(s) 16, 126, 760, 821, 1044, 1358, 1452
AlwNI CAGNNNCTG 2 cut(s) 293, 1385
Ama87I CYCGRG 1 cut(s) 1330
AoxI GGCC 4 cut(s) 302, 723, 796, 943
ApeKI GCWGC 2 cut(s) 156, 791
ApoI RAATTY 3 cut(s) 341, 685, 846
AseI ATTAAT 1 cut(s) 1436
AsiGI ACCGGT 1 cut(s) 333
Asp700I GAANNNNTTC 1 cut(s) 1392
AspLEI GCGC 1 cut(s) 1532
AspS9I GGNCC 3 cut(s) 336, 458, 1080
AsuHPI GGTGA 2 cut(s) 19, 124
AvaI CYCGRG 1 cut(s) 1330
AvaII GGWCC 3 cut(s) 336, 458, 1080
AxyI CCTNAGG 2 cut(s) 203, 1111
BalI TGGCCA 1 cut(s) 798
BanI GGYRCC 1 cut(s) 46
BanII GRGCYC 3 cut(s) 101, 585, 1158
BbrPI CACGTG 1 cut(s) 593
BbsI GAAGAC 2 cut(s) 162, 1176
Bbv12I GWGCWC 1 cut(s) 585
BbvI GCAGC 2 cut(s) 168, 778
BccI CCATC 6 cut(s) 137, 182, 322, 596, 883, 1393
BceAI ACGGC 2 cut(s) 78, 1000
BcgI CGANNNNNNTGC 4 cut(s) 83, 117, 950, 984
BciT130I CCWGG 2 cut(s) 1203, 1537
BcoDI GTCTC 1 cut(s) 738
BfaI CTAG 3 cut(s) 450, 840, 1556
BfmI CTRYAG 1 cut(s) 1074
BfuAI ACCTGC 1 cut(s) 557
BglI GCCNNNNNGGC 2 cut(s) 44, 951
BisI GCNGC 2 cut(s) 157, 792
BlsI GCNGC 2 cut(s) 158, 793
Bme1390I CCNGG 2 cut(s) 1203, 1537
Bme18I GGWCC 3 cut(s) 336, 458, 1080
BmeRI GACNNNNNGTC 1 cut(s) 334
BmeT110I CYCGRG 1 cut(s) 1330
BmgT120I GGNCC 3 cut(s) 336, 458, 1080
BmiI GGNNCC 4 cut(s) 48, 975, 1081, 1155
BmrFI CCNGG 2 cut(s) 1203, 1537
BmrI ACTGGG 1 cut(s) 645
BmsI GCATC 3 cut(s) 151, 952, 1201
BmuI ACTGGG 1 cut(s) 645
BpiI GAAGAC 2 cut(s) 162, 1176
BplI GAGNNNNNCTC 4 cut(s) 186, 218, 834, 866
BpmI CTGGAG 2 cut(s) 701, 720
BsaAI YACGTR 1 cut(s) 593
BsaBI GATNNNNATC 1 cut(s) 1035
BsaJI CCNNGG 2 cut(s) 324, 654
BsaWI WCCGGW 1 cut(s) 333
Bse118I RCCGGY 1 cut(s) 333
Bse1I ACTGG 5 cut(s) 60, 421, 640, 1296, 1465
Bse21I CCTNAGG 2 cut(s) 203, 1111
Bse3DI GCAATG 2 cut(s) 568, 1309
Bse8I GATNNNNATC 1 cut(s) 1035
BseBI CCWGG 2 cut(s) 1203, 1537
BseDI CCNNGG 2 cut(s) 324, 654
BseGI GGATG 5 cut(s) 679, 894, 916, 1036, 1528
BseJI GATNNNNATC 1 cut(s) 1035
BseMI GCAATG 2 cut(s) 568, 1309
BseMII CTCAG 7 cut(s) 217, 497, 519, 570, 660, 865, 1364
BseNI ACTGG 5 cut(s) 60, 421, 640, 1296, 1465
BseRI GAGGAG 1 cut(s) 1308
BseXI GCAGC 2 cut(s) 168, 778
BsgI GTGCAG 1 cut(s) 853
Bsh1236I CGCG 2 cut(s) 193, 1530
BshFI GGCC 4 cut(s) 304, 725, 798, 945
BshNI GGYRCC 1 cut(s) 46
BshTI ACCGGT 1 cut(s) 333
BsiHKAI GWGCWC 1 cut(s) 585
BsiHKCI CYCGRG 1 cut(s) 1330
BsiSI CCGG 2 cut(s) 44, 334
BslFI GGGAC 1 cut(s) 1396
BsmAI GTCTC 1 cut(s) 738
BsmFI GGGAC 1 cut(s) 1396
BsmI GAATGC 1 cut(s) 1048
BsnI GGCC 4 cut(s) 304, 725, 798, 945
BsoBI CYCGRG 1 cut(s) 1330
Bsp1286I GDGCHC 3 cut(s) 101, 585, 1158
Bsp143I GATC 8 cut(s) 8, 118, 752, 813, 1036, 1363, 1444, 1525
BspACI CCGC 4 cut(s) 50, 191, 761, 971
BspANI GGCC 4 cut(s) 304, 725, 798, 945
BspCNI CTCAG 7 cut(s) 216, 498, 520, 571, 661, 864, 1365
BspFNI CGCG 2 cut(s) 193, 1530
BspLI GGNNCC 4 cut(s) 48, 975, 1081, 1155
BspMAI CTGCAG 1 cut(s) 1078
BspMI ACCTGC 1 cut(s) 557
BspPI GGATC 7 cut(s) 16, 126, 760, 821, 1044, 1358, 1452
BspT107I GGYRCC 1 cut(s) 46
BsrDI GCAATG 2 cut(s) 568, 1309
BsrFI RCCGGY 1 cut(s) 333
BsrI ACTGG 5 cut(s) 60, 421, 640, 1296, 1465
BssAI RCCGGY 1 cut(s) 333
BssECI CCNNGG 2 cut(s) 324, 654
BssMI GATC 8 cut(s) 8, 118, 752, 813, 1036, 1363, 1444, 1525
BssT1I CCWWGG 2 cut(s) 324, 654
Bst2UI CCWGG 2 cut(s) 1203, 1537
Bst4CI ACNGT 4 cut(s) 136, 1298, 1427, 1475
Bst6I CTCTTC 1 cut(s) 1224
BstAPI GCANNNNNTGC 1 cut(s) 1198
BstBAI YACGTR 1 cut(s) 593
BstC8I GCNNGC 2 cut(s) 796, 1199
BstDEI CTNAG 9 cut(s) 203, 396, 506, 528, 579, 669, 851, 1111, 1373
BstF5I GGATG 5 cut(s) 679, 894, 916, 1036, 1528
BstFNI CGCG 2 cut(s) 193, 1530
BstHHI GCGC 1 cut(s) 1532
BstKTI GATC 8 cut(s) 11, 121, 755, 816, 1039, 1366, 1447, 1528
BstMAI GTCTC 1 cut(s) 738
BstMBI GATC 8 cut(s) 8, 118, 752, 813, 1036, 1363, 1444, 1525
BstMWI GCNNNNNNNGC 7 cut(s) 44, 153, 580, 788, 951, 1012, 1198
BstNI CCWGG 2 cut(s) 1203, 1537
BstNSI RCATGY 2 cut(s) 1172, 1201
BstSCI CCNGG 2 cut(s) 1201, 1535
BstSFI CTRYAG 1 cut(s) 1074
BstUI CGCG 2 cut(s) 193, 1530
BstV1I GCAGC 2 cut(s) 168, 778
BstV2I GAAGAC 2 cut(s) 162, 1176
BstX2I RGATCY 1 cut(s) 118
BstYI RGATCY 1 cut(s) 118
Bsu36I CCTNAGG 2 cut(s) 203, 1111
BsuRI GGCC 4 cut(s) 304, 725, 798, 945
BtgZI GCGATG 2 cut(s) 174, 1178
BtsCI GGATG 5 cut(s) 679, 894, 916, 1036, 1528
BtsI GCAGTG 1 cut(s) 1354
BtsIMutI CAGTG 8 cut(s) 53, 428, 576, 816, 859, 1303, 1354, 1386
BveI ACCTGC 1 cut(s) 557
Cac8I GCNNGC 2 cut(s) 796, 1199
CaiI CAGNNNCTG 2 cut(s) 293, 1385
CfoI GCGC 1 cut(s) 1532
Cfr10I RCCGGY 1 cut(s) 333
Cfr13I GGNCC 3 cut(s) 336, 458, 1080
Csp6I GTAC 2 cut(s) 418, 1314
CspAI ACCGGT 1 cut(s) 333
CspCI CAANNNNNGTGG 2 cut(s) 574, 609
CviAII CATG 6 cut(s) 800, 947, 1121, 1169, 1198, 1430
CviQI GTAC 2 cut(s) 418, 1314
DdeI CTNAG 9 cut(s) 203, 396, 506, 528, 579, 669, 851, 1111, 1373
DpnI GATC 8 cut(s) 10, 120, 754, 815, 1038, 1365, 1446, 1527
DpnII GATC 8 cut(s) 8, 118, 752, 813, 1036, 1363, 1444, 1525
DriI GACNNNNNGTC 1 cut(s) 334
EaeI YGGCCR 1 cut(s) 796
Eam1104I CTCTTC 1 cut(s) 1224
Eam1105I GACNNNNNGTC 1 cut(s) 334
EarI CTCTTC 1 cut(s) 1224
Ecl136II GAGCTC 1 cut(s) 583
Eco130I CCWWGG 2 cut(s) 324, 654
Eco147I AGGCCT 2 cut(s) 304, 725
Eco24I GRGCYC 3 cut(s) 101, 585, 1158
Eco47I GGWCC 3 cut(s) 336, 458, 1080
Eco53kI GAGCTC 1 cut(s) 583
Eco57I CTGAAG 3 cut(s) 862, 1008, 1407
Eco72I CACGTG 1 cut(s) 593
Eco81I CCTNAGG 2 cut(s) 203, 1111
Eco88I CYCGRG 1 cut(s) 1330
EcoICRI GAGCTC 1 cut(s) 583
EcoRI GAATTC 2 cut(s) 685, 846
EcoRII CCWGG 2 cut(s) 1201, 1535
EcoT14I CCWWGG 2 cut(s) 324, 654
EcoT22I ATGCAT 1 cut(s) 1002
EcoT38I GRGCYC 3 cut(s) 101, 585, 1158
ErhI CCWWGG 2 cut(s) 324, 654
FaeI CATG 6 cut(s) 803, 950, 1124, 1172, 1201, 1433
FaqI GGGAC 1 cut(s) 1396
FatI CATG 6 cut(s) 799, 946, 1120, 1168, 1197, 1429
FauI CCCGC 1 cut(s) 198
Fnu4HI GCNGC 2 cut(s) 157, 792
FokI GGATG 5 cut(s) 686, 901, 923, 1043, 1535
FriOI GRGCYC 3 cut(s) 101, 585, 1158
Fsp4HI GCNGC 2 cut(s) 157, 792
FspBI CTAG 3 cut(s) 450, 840, 1556
GlaI GCGC 1 cut(s) 1531
GluI GCNGC 2 cut(s) 157, 792
GsuI CTGGAG 2 cut(s) 701, 720
HaeIII GGCC 4 cut(s) 304, 725, 798, 945
HapII CCGG 2 cut(s) 44, 334
HhaI GCGC 1 cut(s) 1532
Hin1II CATG 6 cut(s) 803, 950, 1124, 1172, 1201, 1433
Hin6I GCGC 1 cut(s) 1530
HinP1I GCGC 1 cut(s) 1530
HindIII AAGCTT 1 cut(s) 990
HinfI GANTC 7 cut(s) 518, 650, 869, 1328, 1454, 1493, 1506
HpaII CCGG 2 cut(s) 44, 334
HphI GGTGA 2 cut(s) 19, 124
Hpy166II GTNNAC 3 cut(s) 479, 1219, 1405
Hpy188I TCNGA 8 cut(s) 529, 670, 691, 1054, 1327, 1398, 1449, 1575
Hpy188III TCNNGA 7 cut(s) 309, 378, 432, 450, 737, 959, 1367
Hpy8I GTNNAC 3 cut(s) 479, 1219, 1405
Hpy99I CGWCG 2 cut(s) 64, 185
HpyAV CCTTC 3 cut(s) 315, 935, 1019
HpyCH4III ACNGT 4 cut(s) 136, 1298, 1427, 1475
HpyCH4IV ACGT 1 cut(s) 592
HpyCH4V TGCA 6 cut(s) 386, 566, 834, 1000, 1076, 1192
HpyF10VI GCNNNNNNNGC 7 cut(s) 44, 153, 580, 788, 951, 1012, 1198
HpyF3I CTNAG 9 cut(s) 203, 396, 506, 528, 579, 669, 851, 1111, 1373
HpySE526I ACGT 1 cut(s) 592
Hsp92II CATG 6 cut(s) 803, 950, 1124, 1172, 1201, 1433
HspAI GCGC 1 cut(s) 1530
Kzo9I GATC 8 cut(s) 8, 118, 752, 813, 1036, 1363, 1444, 1525
LmnI GCTCC 4 cut(s) 295, 771, 1045, 1153
Lsp1109I GCAGC 2 cut(s) 168, 778
LweI GCATC 3 cut(s) 151, 952, 1201
MaeI CTAG 3 cut(s) 450, 840, 1556
MaeII ACGT 1 cut(s) 592
MalI GATC 8 cut(s) 10, 120, 754, 815, 1038, 1365, 1446, 1527
MboI GATC 8 cut(s) 8, 118, 752, 813, 1036, 1363, 1444, 1525
MboII GAAGA 9 cut(s) 85, 88, 91, 162, 216, 219, 399, 1176, 1241
MflI RGATCY 1 cut(s) 118
MhlI GDGCHC 3 cut(s) 101, 585, 1158
MlsI TGGCCA 1 cut(s) 798
MluCI AATT 9 cut(s) 235, 341, 403, 685, 846, 1069, 1267, 1437, 1561
MluNI TGGCCA 1 cut(s) 798
MlyI GAGTC 3 cut(s) 527, 644, 1322
MmeI TCCRAC 2 cut(s) 1131, 1569
Mox20I TGGCCA 1 cut(s) 798
Mph1103I ATGCAT 1 cut(s) 1002
MroXI GAANNNNTTC 1 cut(s) 1392
MscI TGGCCA 1 cut(s) 798
MseI TTAA 3 cut(s) 1086, 1160, 1436
MslI CAYNNNNRTG 2 cut(s) 1173, 1248
Msp20I TGGCCA 1 cut(s) 798
MspI CCGG 2 cut(s) 44, 334
MspR9I CCNGG 2 cut(s) 1203, 1537
Mva1269I GAATGC 1 cut(s) 1048
MvaI CCWGG 2 cut(s) 1203, 1537
MvnI CGCG 2 cut(s) 193, 1530
MwoI GCNNNNNNNGC 7 cut(s) 44, 153, 580, 788, 951, 1012, 1198
NdeII GATC 8 cut(s) 8, 118, 752, 813, 1036, 1363, 1444, 1525
NlaIII CATG 6 cut(s) 803, 950, 1124, 1172, 1201, 1433
NlaIV GGNNCC 4 cut(s) 48, 975, 1081, 1155
NsiI ATGCAT 1 cut(s) 1002
NspI RCATGY 2 cut(s) 1172, 1201
PaeI GCATGC 1 cut(s) 1201
PaeR7I CTCGAG 1 cut(s) 1330
PceI AGGCCT 2 cut(s) 304, 725
PcsI WCGNNNNNNNCGW 1 cut(s) 921
PctI GAATGC 1 cut(s) 1048
PdmI GAANNNNTTC 1 cut(s) 1392
PfeI GAWTC 4 cut(s) 869, 1454, 1493, 1506
PinAI ACCGGT 1 cut(s) 333
PkrI GCNGC 2 cut(s) 158, 793
PleI GAGTC 3 cut(s) 526, 644, 1322
PmaCI CACGTG 1 cut(s) 593
PmlI CACGTG 1 cut(s) 593
PpsI GAGTC 3 cut(s) 526, 644, 1322
Ppu21I YACGTR 1 cut(s) 593
PshBI ATTAAT 1 cut(s) 1436
Psp124BI GAGCTC 1 cut(s) 585
Psp6I CCWGG 2 cut(s) 1201, 1535
PspCI CACGTG 1 cut(s) 593
PspGI CCWGG 2 cut(s) 1201, 1535
PspN4I GGNNCC 4 cut(s) 48, 975, 1081, 1155
PspPI GGNCC 3 cut(s) 336, 458, 1080
PspXI VCTCGAGB 1 cut(s) 1330
PstI CTGCAG 1 cut(s) 1078
PstNI CAGNNNCTG 2 cut(s) 293, 1385
PsuI RGATCY 1 cut(s) 118
RsaI GTAC 2 cut(s) 419, 1315
RsaNI GTAC 2 cut(s) 418, 1314
RseI CAYNNNNRTG 2 cut(s) 1173, 1248
SacI GAGCTC 1 cut(s) 585
SaqAI TTAA 3 cut(s) 1086, 1160, 1436
SatI GCNGC 2 cut(s) 157, 792
Sau3AI GATC 8 cut(s) 8, 118, 752, 813, 1036, 1363, 1444, 1525
Sau96I GGNCC 3 cut(s) 336, 458, 1080
SchI GAGTC 3 cut(s) 527, 644, 1322
ScrFI CCNGG 2 cut(s) 1203, 1537
SduI GDGCHC 3 cut(s) 101, 585, 1158
SfaNI GCATC 3 cut(s) 151, 952, 1201
SfcI CTRYAG 1 cut(s) 1074
Sfr274I CTCGAG 1 cut(s) 1330
SinI GGWCC 3 cut(s) 336, 458, 1080
SlaI CTCGAG 1 cut(s) 1330
SmiMI CAYNNNNRTG 2 cut(s) 1173, 1248
SmlI CTYRAG 1 cut(s) 1330
SmoI CTYRAG 1 cut(s) 1330
SphI GCATGC 1 cut(s) 1201
Sse9I AATT 9 cut(s) 235, 341, 403, 685, 846, 1069, 1267, 1437, 1561
SseBI AGGCCT 2 cut(s) 304, 725
SsiI CCGC 4 cut(s) 50, 191, 761, 971
SspMI CTAG 3 cut(s) 450, 840, 1556
SstI GAGCTC 1 cut(s) 585
StuI AGGCCT 2 cut(s) 304, 725
StyD4I CCNGG 2 cut(s) 1201, 1535
StyI CCWWGG 2 cut(s) 324, 654
TaaI ACNGT 4 cut(s) 136, 1298, 1427, 1475
TaiI ACGT 1 cut(s) 595
TaqI TCGA 5 cut(s) 103, 183, 960, 1331, 1457
TasI AATT 9 cut(s) 235, 341, 403, 685, 846, 1069, 1267, 1437, 1561
TatI WGTACW 1 cut(s) 1313
TfiI GAWTC 4 cut(s) 869, 1454, 1493, 1506
Tru1I TTAA 3 cut(s) 1086, 1160, 1436
Tru9I TTAA 3 cut(s) 1086, 1160, 1436
TscAI CASTG 8 cut(s) 60, 428, 583, 823, 859, 1303, 1361, 1386
TseI GCWGC 2 cut(s) 156, 791
TspDTI ATGAA 2 cut(s) 17, 1038
TspGWI ACGGA 6 cut(s) 21, 169, 471, 718, 1072, 1263
TspRI CASTG 8 cut(s) 60, 428, 583, 823, 859, 1303, 1361, 1386
VpaK11BI GGWCC 3 cut(s) 336, 458, 1080
VspI ATTAAT 1 cut(s) 1436
XapI RAATTY 3 cut(s) 341, 685, 846
XbaI TCTAGA 1 cut(s) 449
XceI RCATGY 2 cut(s) 1172, 1201
XcmI CCANNNNNNNNNTGG 1 cut(s) 428
XhoI CTCGAG 1 cut(s) 1330
XmnI GAANNNNTTC 1 cut(s) 1392
XspI CTAG 3 cut(s) 450, 840, 1556
Zsp2I ATGCAT 1 cut(s) 1002
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.