Putative S-adenosyl-L-methionine-dependent methyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G45750 AT4G00750 |
| fragaria_vesca | FvH4_7g13290 |
| malus_domestica | MD01G1050600.v1.1 MD07G1127900.v1.1 |
| prunus_persica | Prupe.2G156500_v2.0.a1 |
| pyrus_communis | pycom01g07540 pycom01g07550 pycom07g12340 |
| rosa_chinensis | RchiOBHm_Chr1g0352551 |
| rosa_laevigata | RLG00000028331 |
| rosa_multiflora | Rmu_co8293159.1_g000001 Rmu_sc0000911.1_g000032 |
| rosa_roxburghii | Rroxscaffold_4G00302640 |
| rosa_rugosa | Rorug01G0230000 |
| rosa_samantha | Rh1AG243500 Rh1BG214100 Rh1CG227000 Rh1DG240100 |
| rosa_wichuraiana | Rw1G021280 Rw1G021310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1712 |
| Acc36I | ACCTGC | 1 cut(s) | 1003 |
| AccB1I | GGYRCC | 1 cut(s) | 400 |
| AccI | GTMKAC | 3 cut(s) | 1169, 1425, 1583 |
| AccII | CGCG | 7 cut(s) | 129, 209, 278, 308, 1019, 1277, 1454 |
| AccIII | TCCGGA | 1 cut(s) | 1126 |
| AclI | AACGTT | 1 cut(s) | 1491 |
| AclWI | GGATC | 4 cut(s) | 221, 1145, 1230, 1466 |
| AcoI | YGGCCR | 3 cut(s) | 431, 1236, 1259 |
| AcsI | RAATTY | 4 cut(s) | 4, 323, 393, 1683 |
| AcuI | CTGAAG | 2 cut(s) | 1224, 1344 |
| AcvI | CACGTG | 1 cut(s) | 566 |
| AcyI | GRCGYC | 1 cut(s) | 401 |
| AfaI | GTAC | 8 cut(s) | 154, 407, 518, 553, 631, 803, 914, 1637 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 164, 433, 548, 651, 1504, 1700, 1795 |
| AgeI | ACCGGT | 1 cut(s) | 644 |
| AgsI | TTSAA | 6 cut(s) | 224, 322, 385, 988, 1049, 1120 |
| AhlI | ACTAGT | 1 cut(s) | 1880 |
| AjiI | CACGTC | 2 cut(s) | 448, 1723 |
| AjnI | CCWGG | 3 cut(s) | 541, 904, 1163 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1015, 1047 |
| AluBI | AGCT | 7 cut(s) | 87, 481, 663, 731, 1026, 1328, 1513 |
| AluI | AGCT | 7 cut(s) | 87, 481, 663, 731, 1026, 1328, 1513 |
| Alw21I | GWGCWC | 2 cut(s) | 291, 1888 |
| Alw26I | GTCTC | 1 cut(s) | 711 |
| AlwI | GGATC | 4 cut(s) | 221, 1145, 1230, 1466 |
| Ama87I | CYCGRG | 4 cut(s) | 328, 365, 749, 1307 |
| Aor13HI | TCCGGA | 1 cut(s) | 1126 |
| AoxI | GGCC | 6 cut(s) | 39, 431, 856, 1161, 1236, 1259 |
| ApoI | RAATTY | 4 cut(s) | 4, 323, 393, 1683 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 346, 378, 720, 752 |
| AseI | ATTAAT | 1 cut(s) | 939 |
| AsiGI | ACCGGT | 1 cut(s) | 644 |
| AspLEI | GCGC | 6 cut(s) | 131, 211, 403, 572, 1304, 1858 |
| AspS9I | GGNCC | 7 cut(s) | 511, 856, 929, 972, 1678, 1799, 1845 |
| AsuC2I | CCSGG | 3 cut(s) | 1405, 1499, 1695 |
| AsuHPI | GGTGA | 4 cut(s) | 163, 250, 1409, 1843 |
| AsuNHI | GCTAGC | 2 cut(s) | 83, 659 |
| AvaI | CYCGRG | 4 cut(s) | 328, 365, 749, 1307 |
| AvaII | GGWCC | 6 cut(s) | 511, 929, 972, 1678, 1799, 1845 |
| BanI | GGYRCC | 1 cut(s) | 400 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1370, 1402 |
| BauI | CACGAG | 1 cut(s) | 1790 |
| BbrPI | CACGTG | 1 cut(s) | 566 |
| BbsI | GAAGAC | 1 cut(s) | 309 |
| Bbv12I | GWGCWC | 2 cut(s) | 291, 1888 |
| BbvCI | CCTCAGC | 1 cut(s) | 1218 |
| BccI | CCATC | 6 cut(s) | 423, 644, 860, 874, 1171, 1669 |
| BceAI | ACGGC | 5 cut(s) | 129, 236, 388, 406, 634 |
| BciT130I | CCWGG | 3 cut(s) | 543, 906, 1165 |
| BciVI | GTATCC | 2 cut(s) | 912, 1599 |
| BclI | TGATCA | 2 cut(s) | 1144, 1734 |
| BcnI | CCSGG | 3 cut(s) | 1405, 1499, 1695 |
| BcoDI | GTCTC | 1 cut(s) | 711 |
| BcuI | ACTAGT | 1 cut(s) | 1880 |
| BfaI | CTAG | 7 cut(s) | 62, 84, 660, 810, 1266, 1463, 1881 |
| BfoI | RGCGCY | 3 cut(s) | 404, 573, 1305 |
| BfuAI | ACCTGC | 1 cut(s) | 1003 |
| BfuI | GTATCC | 2 cut(s) | 912, 1599 |
| BglII | AGATCT | 1 cut(s) | 193 |
| BisI | GCNGC | 5 cut(s) | 132, 273, 276, 1455, 1458 |
| BlpI | GCTNAGC | 1 cut(s) | 1509 |
| BlsI | GCNGC | 5 cut(s) | 133, 274, 277, 1456, 1459 |
| Bme1390I | CCNGG | 6 cut(s) | 543, 906, 1165, 1405, 1499, 1695 |
| Bme18I | GGWCC | 6 cut(s) | 511, 929, 972, 1678, 1799, 1845 |
| BmeT110I | CYCGRG | 4 cut(s) | 328, 365, 749, 1307 |
| BmgBI | CACGTC | 2 cut(s) | 448, 1723 |
| BmgT120I | GGNCC | 7 cut(s) | 511, 856, 929, 972, 1678, 1799, 1845 |
| BmiI | GGNNCC | 5 cut(s) | 402, 512, 539, 857, 1800 |
| BmrFI | CCNGG | 6 cut(s) | 543, 906, 1165, 1405, 1499, 1695 |
| BmsI | GCATC | 3 cut(s) | 87, 220, 565 |
| BmtI | GCTAGC | 2 cut(s) | 87, 663 |
| BpiI | GAAGAC | 1 cut(s) | 309 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1218 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1509 |
| BpuEI | CTTGAG | 1 cut(s) | 717 |
| BpuMI | CCSGG | 3 cut(s) | 1405, 1499, 1695 |
| Bsa29I | ATCGAT | 1 cut(s) | 639 |
| BsaAI | YACGTR | 2 cut(s) | 55, 566 |
| BsaBI | GATNNNNATC | 2 cut(s) | 776, 1149 |
| BsaHI | GRCGYC | 1 cut(s) | 401 |
| BsaJI | CCNNGG | 5 cut(s) | 541, 851, 975, 1441, 1639 |
| BsaWI | WCCGGW | 6 cut(s) | 235, 513, 644, 1126, 1474, 1654 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1233, 1263, 1652, 1682 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 164, 433, 548, 651, 1504, 1700, 1795 |
| Bse118I | RCCGGY | 4 cut(s) | 433, 644, 763, 1261 |
| Bse1I | ACTGG | 4 cut(s) | 739, 920, 1390, 1571 |
| Bse3DI | GCAATG | 1 cut(s) | 829 |
| Bse8I | GATNNNNATC | 2 cut(s) | 776, 1149 |
| BseAI | TCCGGA | 1 cut(s) | 1126 |
| BseBI | CCWGG | 3 cut(s) | 543, 906, 1165 |
| BseCI | ATCGAT | 1 cut(s) | 639 |
| BseDI | CCNNGG | 5 cut(s) | 541, 851, 975, 1441, 1639 |
| BseGI | GGATG | 2 cut(s) | 985, 1474 |
| BseJI | GATNNNNATC | 2 cut(s) | 776, 1149 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 164, 433, 548, 651, 1504, 1700, 1795 |
| BseMI | GCAATG | 1 cut(s) | 829 |
| BseMII | CTCAG | 3 cut(s) | 625, 1016, 1209 |
| BseNI | ACTGG | 4 cut(s) | 739, 920, 1390, 1571 |
| BseRI | GAGGAG | 1 cut(s) | 1673 |
| BsgI | GTGCAG | 1 cut(s) | 409 |
| Bsh1236I | CGCG | 7 cut(s) | 129, 209, 278, 308, 1019, 1277, 1454 |
| Bsh1285I | CGRYCG | 2 cut(s) | 317, 1503 |
| BshFI | GGCC | 6 cut(s) | 41, 433, 858, 1163, 1238, 1261 |
| BshNI | GGYRCC | 1 cut(s) | 400 |
| BshTI | ACCGGT | 1 cut(s) | 644 |
| BshVI | ATCGAT | 1 cut(s) | 639 |
| BsiEI | CGRYCG | 2 cut(s) | 317, 1503 |
| BsiHKAI | GWGCWC | 2 cut(s) | 291, 1888 |
| BsiHKCI | CYCGRG | 4 cut(s) | 328, 365, 749, 1307 |
| BsiWI | CGTACG | 1 cut(s) | 405 |
| BslFI | GGGAC | 2 cut(s) | 348, 1481 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 164, 433, 548, 651, 1504, 1700, 1795 |
| BsmAI | GTCTC | 1 cut(s) | 711 |
| BsmFI | GGGAC | 2 cut(s) | 348, 1481 |
| BsmI | GAATGC | 1 cut(s) | 994 |
| BsnI | GGCC | 6 cut(s) | 41, 433, 858, 1163, 1238, 1261 |
| BsoBI | CYCGRG | 4 cut(s) | 328, 365, 749, 1307 |
| Bsp1286I | GDGCHC | 2 cut(s) | 291, 1888 |
| Bsp13I | TCCGGA | 1 cut(s) | 1126 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1509 |
| Bsp19I | CCATGG | 1 cut(s) | 975 |
| Bsp68I | TCGCGA | 1 cut(s) | 1019 |
| BspANI | GGCC | 6 cut(s) | 41, 433, 858, 1163, 1238, 1261 |
| BspCNI | CTCAG | 3 cut(s) | 624, 1015, 1210 |
| BspDI | ATCGAT | 1 cut(s) | 639 |
| BspEI | TCCGGA | 1 cut(s) | 1126 |
| BspFNI | CGCG | 7 cut(s) | 129, 209, 278, 308, 1019, 1277, 1454 |
| BspHI | TCATGA | 3 cut(s) | 1141, 1485, 1804 |
| BspLI | GGNNCC | 5 cut(s) | 402, 512, 539, 857, 1800 |
| BspMI | ACCTGC | 1 cut(s) | 1003 |
| BspOI | GCTAGC | 2 cut(s) | 87, 663 |
| BspPI | GGATC | 4 cut(s) | 221, 1145, 1230, 1466 |
| BspQI | GCTCTTC | 1 cut(s) | 75 |
| BspT107I | GGYRCC | 1 cut(s) | 400 |
| BsrDI | GCAATG | 1 cut(s) | 829 |
| BsrFI | RCCGGY | 4 cut(s) | 433, 644, 763, 1261 |
| BsrI | ACTGG | 4 cut(s) | 739, 920, 1390, 1571 |
| BssAI | RCCGGY | 4 cut(s) | 433, 644, 763, 1261 |
| BssECI | CCNNGG | 5 cut(s) | 541, 851, 975, 1441, 1639 |
| BssNAI | GTATAC | 1 cut(s) | 1170 |
| BssNI | GRCGYC | 1 cut(s) | 401 |
| BssSI | CACGAG | 1 cut(s) | 1790 |
| BssT1I | CCWWGG | 2 cut(s) | 975, 1639 |
| Bst1107I | GTATAC | 1 cut(s) | 1170 |
| Bst2BI | CACGAG | 1 cut(s) | 1790 |
| Bst2UI | CCWGG | 3 cut(s) | 543, 906, 1165 |
| Bst6I | CTCTTC | 1 cut(s) | 75 |
| BstACI | GRCGYC | 1 cut(s) | 401 |
| BstBAI | YACGTR | 2 cut(s) | 55, 566 |
| BstC8I | GCNNGC | 6 cut(s) | 85, 287, 435, 661, 765, 1263 |
| BstDEI | CTNAG | 7 cut(s) | 33, 611, 1002, 1218, 1420, 1509, 1688 |
| BstDSI | CCRYGG | 2 cut(s) | 851, 975 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 546 |
| BstF5I | GGATG | 2 cut(s) | 985, 1474 |
| BstFNI | CGCG | 7 cut(s) | 129, 209, 278, 308, 1019, 1277, 1454 |
| BstH2I | RGCGCY | 3 cut(s) | 404, 573, 1305 |
| BstHHI | GCGC | 6 cut(s) | 131, 211, 403, 572, 1304, 1858 |
| BstMAI | GTCTC | 1 cut(s) | 711 |
| BstMCI | CGRYCG | 2 cut(s) | 317, 1503 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 84, 458, 760, 840, 1463, 1519 |
| BstNI | CCWGG | 3 cut(s) | 543, 906, 1165 |
| BstSCI | CCNGG | 6 cut(s) | 541, 904, 1163, 1403, 1497, 1693 |
| BstSNI | TACGTA | 1 cut(s) | 55 |
| BstUI | CGCG | 7 cut(s) | 129, 209, 278, 308, 1019, 1277, 1454 |
| BstV2I | GAAGAC | 1 cut(s) | 309 |
| BstX2I | RGATCY | 4 cut(s) | 193, 226, 1150, 1222 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 866 |
| BstYI | RGATCY | 4 cut(s) | 193, 226, 1150, 1222 |
| BstZ17I | GTATAC | 1 cut(s) | 1170 |
| Bsu15I | ATCGAT | 1 cut(s) | 639 |
| BsuI | GTATCC | 2 cut(s) | 912, 1599 |
| BsuRI | GGCC | 6 cut(s) | 41, 433, 858, 1163, 1238, 1261 |
| BsuTUI | ATCGAT | 1 cut(s) | 639 |
| BtgI | CCRYGG | 2 cut(s) | 851, 975 |
| BtgZI | GCGATG | 2 cut(s) | 64, 782 |
| BtrI | CACGTC | 2 cut(s) | 448, 1723 |
| BtsCI | GGATG | 2 cut(s) | 985, 1474 |
| BtuMI | TCGCGA | 1 cut(s) | 1019 |
| BveI | ACCTGC | 1 cut(s) | 1003 |
| Cac8I | GCNNGC | 6 cut(s) | 85, 287, 435, 661, 765, 1263 |
| CciI | TCATGA | 3 cut(s) | 1141, 1485, 1804 |
| CfoI | GCGC | 6 cut(s) | 131, 211, 403, 572, 1304, 1858 |
| Cfr10I | RCCGGY | 4 cut(s) | 433, 644, 763, 1261 |
| Cfr13I | GGNCC | 7 cut(s) | 511, 856, 929, 972, 1678, 1799, 1845 |
| ClaI | ATCGAT | 1 cut(s) | 639 |
| CseI | GACGC | 3 cut(s) | 215, 314, 1223 |
| Csp6I | GTAC | 8 cut(s) | 153, 406, 517, 552, 630, 802, 913, 1636 |
| CspAI | ACCGGT | 1 cut(s) | 644 |
| CviQI | GTAC | 8 cut(s) | 153, 406, 517, 552, 630, 802, 913, 1636 |
| DdeI | CTNAG | 7 cut(s) | 33, 611, 1002, 1218, 1420, 1509, 1688 |
| DinI | GGCGCC | 1 cut(s) | 402 |
| EaeI | YGGCCR | 3 cut(s) | 431, 1236, 1259 |
| Eam1104I | CTCTTC | 1 cut(s) | 75 |
| EarI | CTCTTC | 1 cut(s) | 75 |
| EciI | GGCGGA | 1 cut(s) | 782 |
| Eco105I | TACGTA | 1 cut(s) | 55 |
| Eco130I | CCWWGG | 2 cut(s) | 975, 1639 |
| Eco32I | GATATC | 1 cut(s) | 592 |
| Eco47I | GGWCC | 6 cut(s) | 511, 929, 972, 1678, 1799, 1845 |
| Eco57I | CTGAAG | 2 cut(s) | 1224, 1344 |
| Eco72I | CACGTG | 1 cut(s) | 566 |
| Eco88I | CYCGRG | 4 cut(s) | 328, 365, 749, 1307 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 546 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1799 |
| EcoRI | GAATTC | 2 cut(s) | 393, 1683 |
| EcoRII | CCWGG | 3 cut(s) | 541, 904, 1163 |
| EcoRV | GATATC | 1 cut(s) | 592 |
| EcoT14I | CCWWGG | 2 cut(s) | 975, 1639 |
| EgeI | GGCGCC | 1 cut(s) | 402 |
| EheI | GGCGCC | 1 cut(s) | 402 |
| ErhI | CCWWGG | 2 cut(s) | 975, 1639 |
| FaqI | GGGAC | 2 cut(s) | 348, 1481 |
| FauI | CCCGC | 1 cut(s) | 644 |
| FbaI | TGATCA | 2 cut(s) | 1144, 1734 |
| FblI | GTMKAC | 3 cut(s) | 1169, 1425, 1583 |
| Fnu4HI | GCNGC | 5 cut(s) | 132, 273, 276, 1455, 1458 |
| FokI | GGATG | 2 cut(s) | 992, 1481 |
| Fsp4HI | GCNGC | 5 cut(s) | 132, 273, 276, 1455, 1458 |
| FspBI | CTAG | 7 cut(s) | 62, 84, 660, 810, 1266, 1463, 1881 |
| GlaI | GCGC | 6 cut(s) | 130, 210, 402, 571, 1303, 1857 |
| GluI | GCNGC | 5 cut(s) | 132, 273, 276, 1455, 1458 |
| HaeII | RGCGCY | 3 cut(s) | 404, 573, 1305 |
| HaeIII | GGCC | 6 cut(s) | 41, 433, 858, 1163, 1238, 1261 |
| HgaI | GACGC | 3 cut(s) | 215, 314, 1223 |
| HhaI | GCGC | 6 cut(s) | 131, 211, 403, 572, 1304, 1858 |
| Hin1I | GRCGYC | 1 cut(s) | 401 |
| Hin6I | GCGC | 6 cut(s) | 129, 209, 401, 570, 1302, 1856 |
| HinP1I | GCGC | 6 cut(s) | 129, 209, 401, 570, 1302, 1856 |
| HincII | GTYRAC | 2 cut(s) | 1426, 1584 |
| HindII | GTYRAC | 2 cut(s) | 1426, 1584 |
| HindIII | AAGCTT | 2 cut(s) | 1024, 1326 |
| HphI | GGTGA | 4 cut(s) | 163, 250, 1409, 1843 |
| Hpy166II | GTNNAC | 7 cut(s) | 155, 1170, 1294, 1426, 1584, 1652, 1726 |
| Hpy188I | TCNGA | 9 cut(s) | 30, 148, 428, 504, 596, 776, 1005, 1287, 1553 |
| Hpy8I | GTNNAC | 7 cut(s) | 155, 1170, 1294, 1426, 1584, 1652, 1726 |
| Hpy99I | CGWCG | 4 cut(s) | 209, 268, 620, 1588 |
| HpyAV | CCTTC | 7 cut(s) | 31, 101, 145, 816, 1240, 1766, 1789 |
| HpyCH4IV | ACGT | 9 cut(s) | 54, 447, 565, 1491, 1556, 1586, 1598, 1722, 1728 |
| HpyCH4V | TGCA | 5 cut(s) | 78, 390, 671, 710, 992 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 84, 458, 760, 840, 1463, 1519 |
| HpyF3I | CTNAG | 7 cut(s) | 33, 611, 1002, 1218, 1420, 1509, 1688 |
| HpySE526I | ACGT | 9 cut(s) | 54, 447, 565, 1491, 1556, 1586, 1598, 1722, 1728 |
| Hsp92I | GRCGYC | 1 cut(s) | 401 |
| HspAI | GCGC | 6 cut(s) | 129, 209, 401, 570, 1302, 1856 |
| KasI | GGCGCC | 1 cut(s) | 400 |
| Kpn2I | TCCGGA | 1 cut(s) | 1126 |
| KroI | GCCGGC | 3 cut(s) | 433, 763, 1261 |
| KroNI | GCCGGC | 3 cut(s) | 435, 765, 1263 |
| Ksp22I | TGATCA | 2 cut(s) | 1144, 1734 |
| LguI | GCTCTTC | 1 cut(s) | 75 |
| LmnI | GCTCC | 1 cut(s) | 478 |
| LweI | GCATC | 3 cut(s) | 87, 220, 565 |
| MaeI | CTAG | 7 cut(s) | 62, 84, 660, 810, 1266, 1463, 1881 |
| MaeII | ACGT | 9 cut(s) | 54, 447, 565, 1491, 1556, 1586, 1598, 1722, 1728 |
| MaeIII | GTNAC | 4 cut(s) | 55, 238, 410, 443 |
| MboII | GAAGA | 7 cut(s) | 62, 314, 386, 1048, 1186, 1828, 1877 |
| MflI | RGATCY | 4 cut(s) | 193, 226, 1150, 1222 |
| MhlI | GDGCHC | 2 cut(s) | 291, 1888 |
| MluCI | AATT | 9 cut(s) | 4, 181, 323, 393, 505, 940, 1683, 1748, 1779 |
| Mly113I | GGCGCC | 1 cut(s) | 401 |
| MlyI | GAGTC | 3 cut(s) | 448, 994, 1613 |
| MmeI | TCCRAC | 2 cut(s) | 1013, 1650 |
| MroI | TCCGGA | 1 cut(s) | 1126 |
| MroNI | GCCGGC | 3 cut(s) | 433, 763, 1261 |
| MseI | TTAA | 7 cut(s) | 120, 899, 939, 1083, 1271, 1743, 1751 |
| MspR9I | CCNGG | 6 cut(s) | 543, 906, 1165, 1405, 1499, 1695 |
| Mva1269I | GAATGC | 1 cut(s) | 994 |
| MvaI | CCWGG | 3 cut(s) | 543, 906, 1165 |
| MvnI | CGCG | 7 cut(s) | 129, 209, 278, 308, 1019, 1277, 1454 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 84, 458, 760, 840, 1463, 1519 |
| NaeI | GCCGGC | 3 cut(s) | 435, 765, 1263 |
| NarI | GGCGCC | 1 cut(s) | 401 |
| NciI | CCSGG | 3 cut(s) | 1405, 1499, 1695 |
| NcoI | CCATGG | 1 cut(s) | 975 |
| NgoMIV | GCCGGC | 3 cut(s) | 433, 763, 1261 |
| NheI | GCTAGC | 2 cut(s) | 83, 659 |
| NlaIV | GGNNCC | 5 cut(s) | 402, 512, 539, 857, 1800 |
| NmuCI | GTSAC | 2 cut(s) | 238, 443 |
| NruI | TCGCGA | 1 cut(s) | 1019 |
| PaeR7I | CTCGAG | 3 cut(s) | 328, 749, 1307 |
| PagI | TCATGA | 3 cut(s) | 1141, 1485, 1804 |
| PciSI | GCTCTTC | 1 cut(s) | 75 |
| PctI | GAATGC | 1 cut(s) | 994 |
| PdiI | GCCGGC | 3 cut(s) | 435, 765, 1263 |
| PfeI | GAWTC | 8 cut(s) | 18, 143, 168, 499, 777, 1181, 1279, 1449 |
| Pfl23II | CGTACG | 1 cut(s) | 405 |
| PinAI | ACCGGT | 1 cut(s) | 644 |
| PkrI | GCNGC | 5 cut(s) | 133, 274, 277, 1456, 1459 |
| Ple19I | CGATCG | 1 cut(s) | 317 |
| PleI | GAGTC | 3 cut(s) | 447, 994, 1613 |
| PluTI | GGCGCC | 1 cut(s) | 404 |
| PmaCI | CACGTG | 1 cut(s) | 566 |
| PmlI | CACGTG | 1 cut(s) | 566 |
| PpsI | GAGTC | 3 cut(s) | 447, 994, 1613 |
| Ppu21I | YACGTR | 2 cut(s) | 55, 566 |
| PpuMI | RGGWCCY | 1 cut(s) | 1799 |
| PshBI | ATTAAT | 1 cut(s) | 939 |
| PsiI | TTATAA | 1 cut(s) | 1712 |
| Psp1406I | AACGTT | 1 cut(s) | 1491 |
| Psp5II | RGGWCCY | 1 cut(s) | 1799 |
| Psp6I | CCWGG | 3 cut(s) | 541, 904, 1163 |
| PspCI | CACGTG | 1 cut(s) | 566 |
| PspGI | CCWGG | 3 cut(s) | 541, 904, 1163 |
| PspLI | CGTACG | 1 cut(s) | 405 |
| PspN4I | GGNNCC | 5 cut(s) | 402, 512, 539, 857, 1800 |
| PspPI | GGNCC | 7 cut(s) | 511, 856, 929, 972, 1678, 1799, 1845 |
| PspPPI | RGGWCCY | 1 cut(s) | 1799 |
| PspXI | VCTCGAGB | 1 cut(s) | 749 |
| PsuI | RGATCY | 4 cut(s) | 193, 226, 1150, 1222 |
| PvuI | CGATCG | 1 cut(s) | 317 |
| RruI | TCGCGA | 1 cut(s) | 1019 |
| RsaI | GTAC | 8 cut(s) | 154, 407, 518, 553, 631, 803, 914, 1637 |
| RsaNI | GTAC | 8 cut(s) | 153, 406, 517, 552, 630, 802, 913, 1636 |
| SalI | GTCGAC | 2 cut(s) | 1424, 1582 |
| SapI | GCTCTTC | 1 cut(s) | 75 |
| SaqAI | TTAA | 7 cut(s) | 120, 899, 939, 1083, 1271, 1743, 1751 |
| SatI | GCNGC | 5 cut(s) | 132, 273, 276, 1455, 1458 |
| Sau96I | GGNCC | 7 cut(s) | 511, 856, 929, 972, 1678, 1799, 1845 |
| SchI | GAGTC | 3 cut(s) | 448, 994, 1613 |
| ScrFI | CCNGG | 6 cut(s) | 543, 906, 1165, 1405, 1499, 1695 |
| SduI | GDGCHC | 2 cut(s) | 291, 1888 |
| SfaNI | GCATC | 3 cut(s) | 87, 220, 565 |
| SfoI | GGCGCC | 1 cut(s) | 402 |
| Sfr274I | CTCGAG | 3 cut(s) | 328, 749, 1307 |
| SinI | GGWCC | 6 cut(s) | 511, 929, 972, 1678, 1799, 1845 |
| SlaI | CTCGAG | 3 cut(s) | 328, 749, 1307 |
| SmlI | CTYRAG | 4 cut(s) | 328, 732, 749, 1307 |
| SmoI | CTYRAG | 4 cut(s) | 328, 732, 749, 1307 |
| SnaBI | TACGTA | 1 cut(s) | 55 |
| SpeI | ACTAGT | 1 cut(s) | 1880 |
| Sse9I | AATT | 9 cut(s) | 4, 181, 323, 393, 505, 940, 1683, 1748, 1779 |
| SspDI | GGCGCC | 1 cut(s) | 400 |
| SspMI | CTAG | 7 cut(s) | 62, 84, 660, 810, 1266, 1463, 1881 |
| StyD4I | CCNGG | 6 cut(s) | 541, 904, 1163, 1403, 1497, 1693 |
| StyI | CCWWGG | 2 cut(s) | 975, 1639 |
| TaiI | ACGT | 9 cut(s) | 57, 450, 568, 1494, 1559, 1589, 1601, 1725, 1731 |
| TaqII | GACCGA | 1 cut(s) | 1695 |
| TasI | AATT | 9 cut(s) | 4, 181, 323, 393, 505, 940, 1683, 1748, 1779 |
| TauI | GCSGC | 5 cut(s) | 134, 275, 278, 1457, 1460 |
| TfiI | GAWTC | 8 cut(s) | 18, 143, 168, 499, 777, 1181, 1279, 1449 |
| Tru1I | TTAA | 7 cut(s) | 120, 899, 939, 1083, 1271, 1743, 1751 |
| Tru9I | TTAA | 7 cut(s) | 120, 899, 939, 1083, 1271, 1743, 1751 |
| TseFI | GTSAC | 2 cut(s) | 238, 443 |
| Tsp45I | GTSAC | 2 cut(s) | 238, 443 |
| TspDTI | ATGAA | 5 cut(s) | 17, 1445, 1502, 1821, 1878 |
| TspGWI | ACGGA | 5 cut(s) | 257, 491, 617, 840, 985 |
| VpaK11BI | GGWCC | 6 cut(s) | 511, 929, 972, 1678, 1799, 1845 |
| VspI | ATTAAT | 1 cut(s) | 939 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 546 |
| XapI | RAATTY | 4 cut(s) | 4, 323, 393, 1683 |
| XbaI | TCTAGA | 1 cut(s) | 809 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 912 |
| XhoI | CTCGAG | 3 cut(s) | 328, 749, 1307 |
| XmiI | GTMKAC | 3 cut(s) | 1169, 1425, 1583 |
| XspI | CTAG | 7 cut(s) | 62, 84, 660, 810, 1266, 1463, 1881 |