Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0009758

Physical Location & Seq

Genomic Coordinates Reverse (-)

22964340 .. 22968266

Gene Structure 3927 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00302640.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1797 bp

ATGGCGAAGTTCTCGCTGAAGCCGAAGCGGACCAACCTCTACTTCCTGACTCTGGCCACAGTGCTCTGCACACTCTGCTACCTAATCGGCGTCTGGCAGCACTCCGCCGGGACCCCCTCCTCCACCGCCGCCACTACCTCCGTCATCTCCGCCGTCCCCTGCCCCCAGTTTTCCAAAAACATCACGGCCCACCTCGACTTCGAGGCCCACCACCGCGCCGAGGACCTCCCCATCCCTCCAGCGACGGCGCGTGTCACCCACGTGCCGCCATGCGACGCCAGCCTCTCCGAGTACACTCCCTGCGAGGACGCCACCCGGTCCTTGAAGTTCGACCGGGACCGGCTAATTTACCGGGAGCGGCATTGCCCGGAGAAGCAGGAGCTCCTCAAGTGCCGGATTCCGGCGCCGCATGGCTACACCGTGCCGTTCCGGTGGCCGGAGAGCCGGGGCGCGGTGTGGTACGCCAACGTTCCGCACAAGGAGTTGACTGTGGAGAAGAAAAACCAGAATTGGGTTCACTACAAGGGTGGCCGGTTTCGATTCCCTGGGGGCGGGACCATGTTTCCTAACGGTGCGGACGCTTATATTGACGATATTGGCAAGTTGATTAATCTCAGAGACGGGTCTATTAGGACCGCCATTGATACCGGTTGTGGGGTTGCAAGTTGGGGTGCTTACCTTTTGTCTAGGGACATTTTAACAGTGTCATTTGCACCAAGAGACACTCATGAAGCACAAGTTCAATTTGCTCTTGAAAGAGGAGTTCCTGCAGTGATTGGTGTAATGGCTTCAATTAGACTTCCCTATCCCTCGAGAGCTTTCGACATGGCACACTGCTCTCGTTGTCTCATTCCGTGGGGCCAATATGATGGGCTGTACTTGATTGAAGTGGATCGTGTTTTACGACCCGGGGGTATTGGATTCTGTCCGGCCCACCAATCAACTGGCAGAATCACTGGAAAGAAGGGTGACCTTGCCATTTGGCGAAAACCCACTAACCATATCCACTGTAAAGCCAATAGAAAGGTTTTCAAGAAACCATCCTTCTGCCAAGCTCAAAATCCAGACACAGCATGGTATACTAAACTTGAGGAGTGTTTGACTCCATTGCCCGGAGCGAACAACATAAAAGAAGTTGCAGGTGGAGAATTGGCTAAATGGCCAGCGAGGCTAACTACAGTTCCTCCAAGAATTAGTAGTGGAAGTTTGAAAGGAATTACATCTGAGATGTTCAGAGAAAACACGGCGCTATGGAAACAGAGGGTTGCACATTATAAGACCTTGGACTATCAGTTGGCAGACCCTGGGAGGTACCGCAATTTGCTTGACATGAACTCTTACTTGGGGAGCTTTGCGGCTGCACTGGCTGATGACCCTGCATGGGTTATGAACATTGTCCCGGTTGAGGCAGAGGTGAACACCCTTGGAGCCATTTATGAACGTGGATTGATCGGAACTTATCAGAATTGGTGTGAGGCCATGTCTACTTACCCAAGAACCTATGACTTCATCCACTCTGATTCGGTTTTCACTCTTTACAAGGACAGATGCGAAATGGAAGACATTCTTCTAGAAATGGATAGAATTTTAAGGCCACAAGGCAGTATAATTTTCAGGGATGATGTGGATATGGTTCTGAAGGCCAAGGCGCTCTTAGATGCAATGCAATATGATGCCAGAATTGTAGACCATGAACAGAGTCCTCATCATAGAGAAAAGATATTGTTGGCGGCTAAGCAGTACTGGACAGCACCAGCACCAAACCAAAAAGAAGGAGAAAGCAGTAAAGAATCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0012505 GO:0016740 GO:0016741 GO:0031410 GO:0031982 GO:0031984 GO:0032259 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

598

Amino Acids

67.22

Weight (kDa)

8.55

Isoelectric Point (pI)

35.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	97 - 306	4e-105	Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_29	PF03141	319 - 579	3.3e-95	Putative S-adenosyl-L-methionine-dependent methyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009758)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45750 AT4G00750
fragaria_vesca	FvH4_7g13290
malus_domestica	MD01G1050600.v1.1 MD07G1127900.v1.1
prunus_persica	Prupe.2G156500_v2.0.a1
pyrus_communis	pycom01g07540 pycom01g07550 pycom07g12340
rosa_chinensis	RchiOBHm_Chr1g0352551
rosa_laevigata	RLG00000028331
rosa_multiflora	Rmu_co8293159.1_g000001 Rmu_sc0000911.1_g000032
rosa_roxburghii	Rroxscaffold_4G00302640
rosa_rugosa	Rorug01G0230000
rosa_samantha	Rh1AG243500 Rh1BG214100 Rh1CG227000 Rh1DG240100
rosa_wichuraiana	Rw1G021280 Rw1G021310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1275
AarI	CACCTGC	1 cut(s)	1130
Acc36I	ACCTGC	1 cut(s)	1130
Acc65I	GGTACC	1 cut(s)	1311
AccB1I	GGYRCC	2 cut(s)	403, 1311
AccBSI	CCGCTC	1 cut(s)	358
AccI	GTMKAC	3 cut(s)	1079, 1484, 1686
AccII	CGCG	3 cut(s)	216, 250, 452
AclI	AACGTT	1 cut(s)	468
AclWI	GGATC	1 cut(s)	900
AcoI	YGGCCR	4 cut(s)	54, 434, 529, 1160
AcsI	RAATTY	1 cut(s)	1584
AcuI	CTGAAG	2 cut(s)	38, 1658
AcvI	CACGTG	1 cut(s)	262
AcyI	GRCGYC	4 cut(s)	90, 276, 309, 404
AfaI	GTAC	5 cut(s)	293, 461, 878, 1313, 1742
AgeI	ACCGGT	1 cut(s)	647
AgsI	TTSAA	7 cut(s)	325, 743, 755, 792, 887, 1033, 1210
AjnI	CCWGG	2 cut(s)	544, 1303
AjuI	GAANNNNNNNTTGG	4 cut(s)	26, 58, 1325, 1357
AleI	CACNNNNGTG	1 cut(s)	260
AluBI	AGCT	4 cut(s)	382, 818, 1055, 1350
AluI	AGCT	4 cut(s)	382, 818, 1055, 1350
Alw21I	GWGCWC	2 cut(s)	66, 384
Alw26I	GTCTC	3 cut(s)	612, 714, 851
AlwI	GGATC	1 cut(s)	900
AlwNI	CAGNNNCTG	1 cut(s)	1304
Ama87I	CYCGRG	2 cut(s)	811, 908
ApeKI	GCWGC	2 cut(s)	97, 1358
ApoI	RAATTY	1 cut(s)	1584
AseI	ATTAAT	1 cut(s)	609
AsiGI	ACCGGT	1 cut(s)	647
Asp700I	GAANNNNTTC	1 cut(s)	1563
Asp718I	GGTACC	1 cut(s)	1311
AspLEI	GCGC	6 cut(s)	218, 250, 406, 452, 1249, 1651
AsuHPI	GGTGA	3 cut(s)	247, 980, 1426
AvaI	CYCGRG	2 cut(s)	811, 908
AvaII	GGWCC	7 cut(s)	30, 111, 223, 318, 337, 555, 633
BalI	TGGCCA	2 cut(s)	56, 1162
BanI	GGYRCC	2 cut(s)	403, 1311
BanII	GRGCYC	1 cut(s)	384
BbrPI	CACGTG	1 cut(s)	262
BbsI	GAAGAC	1 cut(s)	1566
Bbv12I	GWGCWC	2 cut(s)	66, 384
BbvI	GCAGC	2 cut(s)	109, 1345
BccI	CCATC	3 cut(s)	239, 863, 1048
BceAI	ACGGC	5 cut(s)	137, 201, 261, 409, 1260
BciT130I	CCWGG	2 cut(s)	546, 1305
BcoDI	GTCTC	3 cut(s)	612, 714, 851
BfaI	CTAG	2 cut(s)	687, 1571
BfmI	CTRYAG	2 cut(s)	768, 1176
BfoI	RGCGCY	3 cut(s)	407, 1250, 1652
BfuAI	ACCTGC	1 cut(s)	1130
BglI	GCCNNNNNGGC	1 cut(s)	1168
BisI	GCNGC	8 cut(s)	98, 129, 266, 359, 407, 1356, 1359, 1731
BlpI	GCTNAGC	1 cut(s)	1734
BlsI	GCNGC	8 cut(s)	99, 130, 267, 360, 408, 1357, 1360, 1732
BmcAI	AGTACT	1 cut(s)	1742
Bme18I	GGWCC	7 cut(s)	30, 111, 223, 318, 337, 555, 633
BmeT110I	CYCGRG	2 cut(s)	811, 908
BmiI	GGNNCC	8 cut(s)	112, 113, 338, 405, 556, 860, 1313, 1429
BmrI	ACTGGG	1 cut(s)	160
BmsI	GCATC	3 cut(s)	1538, 1648, 1663
BmuI	ACTGGG	1 cut(s)	160
BpiI	GAAGAC	1 cut(s)	1566
BpmI	CTGGAG	1 cut(s)	222
Bpu1102I	GCTNAGC	1 cut(s)	1734
BpuEI	CTTGAG	2 cut(s)	371, 1109
BsaAI	YACGTR	1 cut(s)	262
BsaHI	GRCGYC	4 cut(s)	90, 276, 309, 404
BsaWI	WCCGGW	2 cut(s)	429, 647
BsaXI	ACNNNNNCTCC	2 cut(s)	1168, 1198
Bse118I	RCCGGY	3 cut(s)	339, 531, 647
Bse1I	ACTGG	5 cut(s)	166, 949, 961, 1368, 1748
Bse3DI	GCAATG	3 cut(s)	361, 1106, 1668
BseBI	CCWGG	2 cut(s)	546, 1305
BseGI	GGATG	4 cut(s)	231, 1040, 1509, 1624
BseMI	GCAATG	3 cut(s)	361, 1106, 1668
BseMII	CTCAG	2 cut(s)	628, 1215
BseNI	ACTGG	5 cut(s)	166, 949, 961, 1368, 1748
BseRI	GAGGAG	4 cut(s)	109, 374, 774, 1106
BseXI	GCAGC	2 cut(s)	109, 1345
BsgI	GTGCAG	2 cut(s)	52, 1344
Bsh1236I	CGCG	3 cut(s)	216, 250, 452
Bsh1285I	CGRYCG	1 cut(s)	334
BshNI	GGYRCC	2 cut(s)	403, 1311
BshTI	ACCGGT	1 cut(s)	647
BsiEI	CGRYCG	1 cut(s)	334
BsiHKAI	GWGCWC	2 cut(s)	66, 384
BsiHKCI	CYCGRG	2 cut(s)	811, 908
BslFI	GGGAC	6 cut(s)	124, 140, 350, 568, 704, 1382
BsmAI	GTCTC	3 cut(s)	612, 714, 851
BsmBI	CGTCTC	1 cut(s)	612
BsmFI	GGGAC	6 cut(s)	124, 140, 350, 568, 704, 1382
BsoBI	CYCGRG	2 cut(s)	811, 908
Bsp1286I	GDGCHC	2 cut(s)	66, 384
Bsp143I	GATC	2 cut(s)	892, 1449
Bsp1720I	GCTNAGC	1 cut(s)	1734
BspCNI	CTCAG	2 cut(s)	627, 1216
BspFNI	CGCG	3 cut(s)	216, 250, 452
BspHI	TCATGA	1 cut(s)	727
BspLI	GGNNCC	8 cut(s)	112, 113, 338, 405, 556, 860, 1313, 1429
BspMAI	CTGCAG	1 cut(s)	772
BspMI	ACCTGC	1 cut(s)	1130
BspPI	GGATC	1 cut(s)	900
BspT107I	GGYRCC	2 cut(s)	403, 1311
BsrBI	CCGCTC	1 cut(s)	358
BsrDI	GCAATG	3 cut(s)	361, 1106, 1668
BsrFI	RCCGGY	3 cut(s)	339, 531, 647
BsrI	ACTGG	5 cut(s)	166, 949, 961, 1368, 1748
BssAI	RCCGGY	3 cut(s)	339, 531, 647
BssMI	GATC	2 cut(s)	892, 1449
BssNAI	GTATAC	1 cut(s)	1080
BssNI	GRCGYC	4 cut(s)	90, 276, 309, 404
BssT1I	CCWWGG	3 cut(s)	1281, 1423, 1644
Bst1107I	GTATAC	1 cut(s)	1080
Bst2UI	CCWGG	2 cut(s)	546, 1305
Bst4CI	ACNGT	7 cut(s)	61, 421, 490, 572, 703, 1010, 1180
BstACI	GRCGYC	4 cut(s)	90, 276, 309, 404
BstAPI	GCANNNNNTGC	1 cut(s)	75
BstBAI	YACGTR	1 cut(s)	262
BstC8I	GCNNGC	2 cut(s)	280, 1164
BstDEI	CTNAG	4 cut(s)	614, 1224, 1654, 1734
BstDSI	CCRYGG	1 cut(s)	854
BstEII	GGTNACC	1 cut(s)	968
BstF5I	GGATG	4 cut(s)	231, 1040, 1509, 1624
BstFNI	CGCG	3 cut(s)	216, 250, 452
BstH2I	RGCGCY	3 cut(s)	407, 1250, 1652
BstHHI	GCGC	6 cut(s)	218, 250, 406, 452, 1249, 1651
BstKTI	GATC	2 cut(s)	895, 1452
BstMAI	GTCTC	3 cut(s)	612, 714, 851
BstMBI	GATC	2 cut(s)	892, 1449
BstMCI	CGRYCG	1 cut(s)	334
BstMWI	GCNNNNNNNGC	4 cut(s)	75, 279, 1168, 1364
BstNI	CCWGG	2 cut(s)	546, 1305
BstPI	GGTNACC	1 cut(s)	968
BstSFI	CTRYAG	2 cut(s)	768, 1176
BstUI	CGCG	3 cut(s)	216, 250, 452
BstV1I	GCAGC	2 cut(s)	109, 1345
BstV2I	GAAGAC	1 cut(s)	1566
BstXI	CCANNNNNNTGG	2 cut(s)	869, 944
BstZ17I	GTATAC	1 cut(s)	1080
BtgI	CCRYGG	1 cut(s)	854
BtsCI	GGATG	4 cut(s)	231, 1040, 1509, 1624
BtsI	GCAGTG	2 cut(s)	777, 832
BtsIMutI	CAGTG	7 cut(s)	66, 708, 777, 832, 954, 1006, 1361
BveI	ACCTGC	1 cut(s)	1130
Cac8I	GCNNGC	2 cut(s)	280, 1164
CaiI	CAGNNNCTG	1 cut(s)	1304
CciI	TCATGA	1 cut(s)	727
CfoI	GCGC	6 cut(s)	218, 250, 406, 452, 1249, 1651
Cfr10I	RCCGGY	3 cut(s)	339, 531, 647
Cfr9I	CCCGGG	1 cut(s)	908
CseI	GACGC	4 cut(s)	79, 284, 317, 587
Csp6I	GTAC	5 cut(s)	292, 460, 877, 1312, 1741
CspAI	ACCGGT	1 cut(s)	647
CviQI	GTAC	5 cut(s)	292, 460, 877, 1312, 1741
DdeI	CTNAG	4 cut(s)	614, 1224, 1654, 1734
DinI	GGCGCC	1 cut(s)	405
DpnI	GATC	2 cut(s)	894, 1451
DpnII	GATC	2 cut(s)	892, 1449
EaeI	YGGCCR	4 cut(s)	54, 434, 529, 1160
EciI	GGCGGA	2 cut(s)	94, 139
Ecl136II	GAGCTC	1 cut(s)	382
Eco130I	CCWWGG	3 cut(s)	1281, 1423, 1644
Eco24I	GRGCYC	1 cut(s)	384
Eco47I	GGWCC	7 cut(s)	30, 111, 223, 318, 337, 555, 633
Eco53kI	GAGCTC	1 cut(s)	382
Eco57I	CTGAAG	2 cut(s)	38, 1658
Eco72I	CACGTG	1 cut(s)	262
Eco88I	CYCGRG	2 cut(s)	811, 908
Eco91I	GGTNACC	1 cut(s)	968
EcoICRI	GAGCTC	1 cut(s)	382
EcoO109I	RGGNCCY	2 cut(s)	111, 223
EcoO65I	GGTNACC	1 cut(s)	968
EcoRII	CCWGG	2 cut(s)	544, 1303
EcoT14I	CCWWGG	3 cut(s)	1281, 1423, 1644
EcoT38I	GRGCYC	1 cut(s)	384
EgeI	GGCGCC	1 cut(s)	405
EheI	GGCGCC	1 cut(s)	405
ErhI	CCWWGG	3 cut(s)	1281, 1423, 1644
Esp3I	CGTCTC	1 cut(s)	612
FalI	AAGNNNNNCTT	4 cut(s)	1551, 1583, 1637, 1669
FaqI	GGGAC	6 cut(s)	124, 140, 350, 568, 704, 1382
FauI	CCCGC	1 cut(s)	545
FblI	GTMKAC	3 cut(s)	1079, 1484, 1686
Fnu4HI	GCNGC	8 cut(s)	98, 129, 266, 359, 407, 1356, 1359, 1731
FokI	GGATG	4 cut(s)	218, 1027, 1496, 1631
FriOI	GRGCYC	1 cut(s)	384
Fsp4HI	GCNGC	8 cut(s)	98, 129, 266, 359, 407, 1356, 1359, 1731
FspBI	CTAG	2 cut(s)	687, 1571
GlaI	GCGC	6 cut(s)	217, 249, 405, 451, 1248, 1650
GluI	GCNGC	8 cut(s)	98, 129, 266, 359, 407, 1356, 1359, 1731
GsuI	CTGGAG	1 cut(s)	222
HaeII	RGCGCY	3 cut(s)	407, 1250, 1652
HgaI	GACGC	4 cut(s)	79, 284, 317, 587
HhaI	GCGC	6 cut(s)	218, 250, 406, 452, 1249, 1651
Hin1I	GRCGYC	4 cut(s)	90, 276, 309, 404
Hin6I	GCGC	6 cut(s)	216, 248, 404, 450, 1247, 1649
HinP1I	GCGC	6 cut(s)	216, 248, 404, 450, 1247, 1649
HincII	GTYRAC	1 cut(s)	486
HindII	GTYRAC	1 cut(s)	486
HinfI	GANTC	9 cut(s)	49, 397, 540, 921, 951, 1102, 1520, 1699, 1790
HphI	GGTGA	3 cut(s)	247, 980, 1426
Hpy166II	GTNNAC	7 cut(s)	294, 486, 517, 1080, 1417, 1485, 1687
Hpy188I	TCNGA	8 cut(s)	289, 617, 1225, 1235, 1454, 1464, 1519, 1638
Hpy188III	TCNNGA	7 cut(s)	46, 728, 752, 813, 1033, 1064, 1571
Hpy8I	GTNNAC	7 cut(s)	294, 486, 517, 1080, 1417, 1485, 1687
Hpy99I	CGWCG	2 cut(s)	247, 278
HpyAV	CCTTC	4 cut(s)	958, 1054, 1633, 1766
HpyCH4III	ACNGT	7 cut(s)	61, 421, 490, 572, 703, 1010, 1180
HpyCH4IV	ACGT	3 cut(s)	261, 468, 1441
HpyF10VI	GCNNNNNNNGC	4 cut(s)	75, 279, 1168, 1364
HpyF3I	CTNAG	4 cut(s)	614, 1224, 1654, 1734
HpySE526I	ACGT	3 cut(s)	261, 468, 1441
Hsp92I	GRCGYC	4 cut(s)	90, 276, 309, 404
HspAI	GCGC	6 cut(s)	216, 248, 404, 450, 1247, 1649
KasI	GGCGCC	1 cut(s)	403
KflI	GGGWCCC	1 cut(s)	111
KpnI	GGTACC	1 cut(s)	1315
Kzo9I	GATC	2 cut(s)	892, 1449
LmnI	GCTCC	6 cut(s)	355, 379, 387, 1115, 1347, 1427
Lsp1109I	GCAGC	2 cut(s)	109, 1345
LweI	GCATC	3 cut(s)	1538, 1648, 1663
MaeI	CTAG	2 cut(s)	687, 1571
MaeII	ACGT	3 cut(s)	261, 468, 1441
MaeIII	GTNAC	2 cut(s)	253, 968
MalI	GATC	2 cut(s)	894, 1451
MbiI	CCGCTC	1 cut(s)	358
MboI	GATC	2 cut(s)	892, 1449
MboII	GAAGA	3 cut(s)	508, 1559, 1571
MhlI	GDGCHC	2 cut(s)	66, 384
MlsI	TGGCCA	2 cut(s)	56, 1162
MluNI	TGGCCA	2 cut(s)	56, 1162
Mly113I	GGCGCC	1 cut(s)	404
MlyI	GAGTC	3 cut(s)	43, 1096, 1708
Mox20I	TGGCCA	2 cut(s)	56, 1162
MroXI	GAANNNNTTC	1 cut(s)	1563
MscI	TGGCCA	2 cut(s)	56, 1162
MseI	TTAA	3 cut(s)	609, 698, 1589
MslI	CAYNNNNRTG	1 cut(s)	260
Msp20I	TGGCCA	2 cut(s)	56, 1162
MvaI	CCWGG	2 cut(s)	546, 1305
MvnI	CGCG	3 cut(s)	216, 250, 452
MwoI	GCNNNNNNNGC	4 cut(s)	75, 279, 1168, 1364
NarI	GGCGCC	1 cut(s)	404
NdeII	GATC	2 cut(s)	892, 1449
NlaIV	GGNNCC	8 cut(s)	112, 113, 338, 405, 556, 860, 1313, 1429
NmeAIII	GCCGAG	1 cut(s)	244
NmuCI	GTSAC	2 cut(s)	253, 968
OliI	CACNNNNGTG	1 cut(s)	260
PaeR7I	CTCGAG	1 cut(s)	811
PagI	TCATGA	1 cut(s)	727
PaqCI	CACCTGC	1 cut(s)	1130
PasI	CCCWGGG	2 cut(s)	545, 1304
PcsI	WCGNNNNNNNCGW	2 cut(s)	20, 901
PdmI	GAANNNNTTC	1 cut(s)	1563
PfeI	GAWTC	6 cut(s)	397, 540, 921, 951, 1520, 1790
PinAI	ACCGGT	1 cut(s)	647
PkrI	GCNGC	8 cut(s)	99, 130, 267, 360, 408, 1357, 1360, 1732
PleI	GAGTC	3 cut(s)	43, 1096, 1707
PluTI	GGCGCC	1 cut(s)	407
PmaCI	CACGTG	1 cut(s)	262
PmlI	CACGTG	1 cut(s)	262
PpsI	GAGTC	3 cut(s)	43, 1096, 1707
Ppu21I	YACGTR	1 cut(s)	262
PpuMI	RGGWCCY	2 cut(s)	111, 223
PshBI	ATTAAT	1 cut(s)	609
PsiI	TTATAA	1 cut(s)	1275
Psp124BI	GAGCTC	1 cut(s)	384
Psp1406I	AACGTT	1 cut(s)	468
Psp5II	RGGWCCY	2 cut(s)	111, 223
Psp6I	CCWGG	2 cut(s)	544, 1303
PspCI	CACGTG	1 cut(s)	262
PspEI	GGTNACC	1 cut(s)	968
PspGI	CCWGG	2 cut(s)	544, 1303
PspN4I	GGNNCC	8 cut(s)	112, 113, 338, 405, 556, 860, 1313, 1429
PspPPI	RGGWCCY	2 cut(s)	111, 223
PstI	CTGCAG	1 cut(s)	772
PstNI	CAGNNNCTG	1 cut(s)	1304
RsaI	GTAC	5 cut(s)	293, 461, 878, 1313, 1742
RsaNI	GTAC	5 cut(s)	292, 460, 877, 1312, 1741
RseI	CAYNNNNRTG	1 cut(s)	260
SacI	GAGCTC	1 cut(s)	384
SaqAI	TTAA	3 cut(s)	609, 698, 1589
SatI	GCNGC	8 cut(s)	98, 129, 266, 359, 407, 1356, 1359, 1731
Sau3AI	GATC	2 cut(s)	892, 1449
ScaI	AGTACT	1 cut(s)	1742
SchI	GAGTC	3 cut(s)	43, 1096, 1708
SduI	GDGCHC	2 cut(s)	66, 384
SfaNI	GCATC	3 cut(s)	1538, 1648, 1663
SfcI	CTRYAG	2 cut(s)	768, 1176
SfoI	GGCGCC	1 cut(s)	405
Sfr274I	CTCGAG	1 cut(s)	811
SinI	GGWCC	7 cut(s)	30, 111, 223, 318, 337, 555, 633
SlaI	CTCGAG	1 cut(s)	811
SmaI	CCCGGG	1 cut(s)	910
SmiMI	CAYNNNNRTG	1 cut(s)	260
SmlI	CTYRAG	3 cut(s)	386, 811, 1088
SmoI	CTYRAG	3 cut(s)	386, 811, 1088
SspDI	GGCGCC	1 cut(s)	403
SspMI	CTAG	2 cut(s)	687, 1571
SstI	GAGCTC	1 cut(s)	384
StyI	CCWWGG	3 cut(s)	1281, 1423, 1644
TaaI	ACNGT	7 cut(s)	61, 421, 490, 572, 703, 1010, 1180
TaiI	ACGT	3 cut(s)	264, 471, 1444
TaqI	TCGA	6 cut(s)	195, 201, 330, 538, 812, 822
TatI	WGTACW	3 cut(s)	291, 876, 1740
TauI	GCSGC	6 cut(s)	131, 268, 361, 409, 1358, 1733
TfiI	GAWTC	6 cut(s)	397, 540, 921, 951, 1520, 1790
Tru1I	TTAA	3 cut(s)	609, 698, 1589
Tru9I	TTAA	3 cut(s)	609, 698, 1589
TscAI	CASTG	7 cut(s)	66, 708, 777, 839, 961, 1013, 1368
TseFI	GTSAC	2 cut(s)	253, 968
TseI	GCWGC	2 cut(s)	97, 1358
Tsp45I	GTSAC	2 cut(s)	253, 968
TspDTI	ATGAA	6 cut(s)	744, 1346, 1403, 1452, 1498, 1707
TspGWI	ACGGA	2 cut(s)	130, 843
TspMI	CCCGGG	1 cut(s)	908
TspRI	CASTG	7 cut(s)	66, 708, 777, 839, 961, 1013, 1368
VpaK11BI	GGWCC	7 cut(s)	30, 111, 223, 318, 337, 555, 633
VspI	ATTAAT	1 cut(s)	609
XapI	RAATTY	1 cut(s)	1584
XbaI	TCTAGA	1 cut(s)	1570
XcmI	CCANNNNNNNNNTGG	2 cut(s)	941, 1071
XhoI	CTCGAG	1 cut(s)	811
XmaI	CCCGGG	1 cut(s)	908
XmiI	GTMKAC	3 cut(s)	1079, 1484, 1686
XmnI	GAANNNNTTC	1 cut(s)	1563
XspI	CTAG	2 cut(s)	687, 1571
ZrmI	AGTACT	1 cut(s)	1742

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.