AT3G05380
MYB Family

binding, transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0002363
Physical Location & Seq
Forward (+)
1539527 .. 1546469
6943 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G05380.5

Sequence Viewer

Length: 3156 bp
ATGGCACCAGTTAGGAAGTCGAGGAGTGTGAACAAGCGTTTCACCAATGAAACTTCCCCAAGAAAAGATGCTGGGAAATCGAAAAAAAATAAGCTACGTAAGAAATTGTCTGACAAGCTGGGACCTCAGTGGACCAGATTAGAACTTGAGCGTTTCTATGATGCTTACCGCAAGCACGGACAAGAGTGGAGAAGGGTGGCTGCTGCAATTCGGAATAGCAGGTCTGTTGACATGGTGGAAGCTCTATTTAATATGAATCGGGCGTATTTATCTCTCCCCGAGGGAACTGCCTCTGTAGCTGGCCTTATTGCGATGATGACAGATCATTACAGTGTCATGGAAGGGAGTGGCAGTGAAGGAGAAGGCCATGATGCTTCAGAAGTACCAAGGAAACAACAAAAGCGCAAACGTGCTAAACCTCAACGTAGCGATTCTCCAGAGGAAGTGGATATACAACAGTCAATTGGTTCACCAGATGGATGCCTCACGTTTTTGAAGCAAGCACGAGCTAATGGAACTCAGCGACATGCCACTGGAAAACGTACACCACGGGTTCCTGTACAAACTTCATTTATGAGGGATGATAGAGAAGGCTCTACTCCACCAAATAAAAGAGCCAGGAAGCAATTCGATGCCAATGATGATGTAGCACATTTTTTAGCGTTAGCATTAACAGATGCATCGAGAAGGGGAGGGTCTCCAAAAGTTTCTGAATCACCAAATAGAAGAACAGAACTTAGCGATAGCTCACCGATAAAGAGCTGGGGGAAAATGTCGCGAACCAGAAAATCTCAGTCTAAGCACTGTGGCAGCTCCATTTTCGAGGAGTGGATGGAAAGTAGCCGAGAAAGGAAACTTGACTCTGATAAAGATACTACCTTGTTGATGGATATGGAAAGGGCTGGCGAAATGGAGGCTCCGCGGAAGGGGAAAAGAGTCTACAAGAAAAGAGTGAAAGTCGAAGAAGCAGAATGTAATGATTCTGATGACAATGGAGAAGCATGCAGTGCCACACAAGGGCTCAGAAGTAAATCACAAAGACGAAAGGCTGCTATTGAAGCCTCAAGAGAGAAATACTCACCGCGCAGCCCAAAGAAAAGAGATGACAAACATACTTCCGGAGCTTTTGATGCCCTGCAAGCATTGGCCGAATTGTCAGCTTCAATGCTTCCAGCAAATTTGATGGAGTCAGAATTATCTGCTCAGTTGAAGGAAGAAAGAACAGAATACGACATGGACGAGAAATCTAGCACACCAGAAGCTACTTCCACAAGCAGTCATGGGGAAAAAGCAAATGTAGAGCCAGATGATAGTCTCCTTCATGCAATTTCTTCTGTTGAGAATGCTAACAAGAGAAAGTCAAAACCTTCAAGGCTGGTATCCACTGATTGTGATGATGTTCCCACAGGGAAGCTACAACCACAAACTAGTGGCAGTTTAAGAAAACGTAAACCAAAGGTACTAGGGGATGAAGCTCCAGCAGAGTTTAGTCAGAACAAATCCATAAACAAGAAGGAATTGCCTCAAGATGAGAATAATATGAAGTCTTTGGTTAAAACAAAACGCGCTGGTCAAGTTCCGGCTCAGTCAAAACAGATGAAAACTGTTAAGGCGTTGGAGGAATCTGCTATAACAAGTGATAAGAAAAGACCTGGGATGGATATAGTAGCGTCACCTAAACAAGTTTCTGACTCGGGTCCAACCAGTTTATCGCAGAAACCTCCAAACAGGCGAAAGAAGAGTCTGCAGAAAAGCTTACAAGAAAAGGCTAAATCTTCTGAAACCACTCATAAAGCTGCACGTAGTTCCAGATCTCTTTCAGAACAAGAGTTGTTGTTAAAGGATAAGCTTGCTACTTCTCTGTCGTTTCCCTTTGCACGTCGAAGGTGCATATTTGAATGGTTTTATAGTGCTATCGACCATCCCTGGTTTTCAAAGATGGAGTTTGTCGATTACCTAAATCACGTGGGGCTTGGTCACATTCCAAGACTTACTCGTCTTGAATGGAGCGTCATTAAAAGTTCTCTTGGTAGACCACGAAGATTCTCTGAGAGATTTTTACATGAAGAGCGGGAGAAACTTAAACAGTACCGCGAATCTGTGCGAAAGCATTATACAGAGCTTCGAACGGGTGCTAGGGAGGGGCTTCCTACAGATTTGGCTCGGCCATTAGCAGTTGGGAACAGAGTCATTGCCATCCATCCCAAAACACGGGAGATTCATGATGGAAAAATTCTCACTGTTGATCATAACAAATGCAATGTTCTCTTCGATGACTTGGGCGTTGAGTTGGTTATGGACATTGATTGCATGCCTTTAAATCCACTGGAATACATGCCAGAGGGTCTAAGGAGGCAAATTGATAAGTGCTTGTCTATGAAGAAAGAAGCACAGCTAAGCGGGAATACAAACCTTGGTGTGTCTGTGCTATTCCCTCCTTGCGGACTTGAAAATGTCAGCTTTTCCATGAATCCTCCTCTGAATCAGGGTGATATGATTGCTCCCATTCTGCATGGTAAAGTATCAAGCAACACTAGTAGTCCACGGCAGACTAATCATTCATATATCACAACTTATAACAAAGCAAAAGAAGCTGAGATTCAACGGGCACAAGCGCTACAGCATGCTTTAGATGAAAAGGAAATGGAGCCAGAGATGCTAGAAATTGTCAAGGGTTCAAAAACAAGAGCGCAAGCAATGGTGGATGCAGCTATAAAGGCTGCATCATCTGTGAAGGAAGGGGAAGATGTGAACACAATGATCCAAGAAGCCTTAGAGTTGGTTGGCAAAAATCAGCTATTACGCAGCTCTATGGTCAAACATCACGAGCATGTAAATGGCAGTATAGAGCATCATCACAACCCATCTCCTTCAAATGGATCAGAGCCTGTGGCTAACAACGATTTAAACTCACAAGATGGTTCAGAGAAAAACGCTCAAATGCCTTCAGAGCTTATCACCTCCTGTGTTGCCACTTGGCTCATGATTCAGATGTGCACGGAGAGACAGTACCCTCCAGCTGATGTCGCACAGCTTATAGACGCAGCAGTCACAAGCTTGCAGCCACGATGCCCACAGAACCTACCGATCTACAGAGAAATCCAAACGTGCATGGGACGGATCAAGACTCAAATCATGTCCCTTGTACCAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04218 map04218
Pfam Domains
Protein Families
DIRP Myb_DNA-binding

Protein Analysis

1051

Amino Acids

117.78

Weight (kDa)

9.39

Isoelectric Point (pI)

57.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIRP PF06584 635 - 736 3.8e-33 DIRP
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2577
AasI GACNNNNNNGTC 2 cut(s) 1995, 3047
Acc36I ACCTGC 1 cut(s) 210
AccB1I GGYRCC 1 cut(s) 4
AccBSI CCGCTC 1 cut(s) 2071
AccI GTMKAC 2 cut(s) 939, 2032
AccII CGCG 5 cut(s) 778, 922, 1084, 1566, 2094
AccIII TCCGGA 1 cut(s) 1118
AciI CCGC 8 cut(s) 169, 920, 922, 1082, 2071, 2092, 2400, 2442
AclWI GGATC 3 cut(s) 2755, 2887, 3128
AcoI YGGCCR 2 cut(s) 1146, 2165
AcsI RAATTY 2 cut(s) 1177, 2232
AcuI CTGAAG 2 cut(s) 360, 2931
AcvI CACGTG 1 cut(s) 1966
AfaI GTAC 7 cut(s) 384, 544, 561, 1461, 2090, 3011, 3147
AfeI AGCGCT 1 cut(s) 2616
AfiI CCNNNNNNNGG 5 cut(s) 926, 1017, 2211, 2441, 2876
AhlI ACTAGT 2 cut(s) 1427, 2534
AjiI CACGTC 1 cut(s) 1880
AjnI CCWGG 3 cut(s) 617, 1651, 1925
Alw21I GWGCWC 1 cut(s) 2999
Alw26I GTCTC 3 cut(s) 702, 1319, 2998
Alw44I GTGCAC 1 cut(s) 2995
AlwI GGATC 3 cut(s) 2755, 2887, 3128
AlwNI CAGNNNCTG 1 cut(s) 2888
Ama87I CYCGRG 2 cut(s) 278, 1693
Aor13HI TCCGGA 1 cut(s) 1118
Aor51HI AGCGCT 1 cut(s) 2616
AoxI GGCC 4 cut(s) 301, 364, 1146, 2165
ApaLI GTGCAC 1 cut(s) 2995
ApoI RAATTY 2 cut(s) 1177, 2232
ArsI GACNNNNNNTTYG 2 cut(s) 1726, 1758
Asp700I GAANNNNTTC 1 cut(s) 626
AspLEI GCGC 5 cut(s) 405, 1086, 1568, 2617, 2692
AspS9I GGNCC 3 cut(s) 122, 132, 1697
AsuHPI GGTGA 8 cut(s) 34, 462, 708, 741, 1071, 1665, 2501, 2950
AsuII TTCGAA 1 cut(s) 2125
AvaI CYCGRG 2 cut(s) 278, 1693
AvaII GGWCC 3 cut(s) 122, 132, 1697
BaeGI GKGCMC 2 cut(s) 2611, 2999
BanI GGYRCC 1 cut(s) 4
BanII GRGCYC 1 cut(s) 1023
BarI GAAGNNNNNNTAC 2 cut(s) 435, 467
BauI CACGAG 2 cut(s) 504, 2825
BbrPI CACGTG 1 cut(s) 1966
Bbv12I GWGCWC 1 cut(s) 2999
BceAI ACGGC 1 cut(s) 2561
BcgI CGANNNNNNTGC 2 cut(s) 269, 303
BciT130I CCWGG 3 cut(s) 619, 1653, 1927
BciVI GTATCC 1 cut(s) 1390
BclI TGATCA 1 cut(s) 2245
BcoDI GTCTC 3 cut(s) 702, 1319, 2998
BcuI ACTAGT 2 cut(s) 1427, 2534
BfaI CTAG 6 cut(s) 1248, 1428, 1463, 2136, 2535, 2660
BfmI CTRYAG 5 cut(s) 294, 1745, 2151, 2618, 3091
BfoI RGCGCY 1 cut(s) 2618
BfuAI ACCTGC 1 cut(s) 210
BfuI GTATCC 1 cut(s) 1390
BglII AGATCT 1 cut(s) 1811
BlpI GCTNAGC 1 cut(s) 2396
Bme1390I CCNGG 3 cut(s) 619, 1653, 1927
Bme18I GGWCC 3 cut(s) 122, 132, 1697
BmeT110I CYCGRG 2 cut(s) 278, 1693
BmgBI CACGTC 1 cut(s) 1880
BmgT120I GGNCC 3 cut(s) 122, 132, 1697
BmiI GGNNCC 6 cut(s) 6, 123, 555, 918, 1698, 2649
BmrFI CCNGG 3 cut(s) 619, 1653, 1927
BoxI GACNNNNGTC 1 cut(s) 1695
BplI GAGNNNNNCTC 2 cut(s) 1061, 1093
BpmI CTGGAG 3 cut(s) 420, 1461, 3000
Bpu1102I GCTNAGC 1 cut(s) 2396
Bpu14I TTCGAA 1 cut(s) 2125
BpuEI CTTGAG 3 cut(s) 167, 1048, 1509
BsaAI YACGTR 3 cut(s) 98, 1802, 1966
BsaI GGTCTC 1 cut(s) 702
BsaJI CCNNGG 8 cut(s) 279, 386, 548, 920, 1652, 1925, 2413, 2543
BsaWI WCCGGW 1 cut(s) 1118
BsaXI ACNNNNNCTCC 4 cut(s) 337, 367, 2993, 3023
Bsc4I CCNNNNNNNGG 5 cut(s) 926, 1017, 2211, 2441, 2876
Bse1I ACTGG 4 cut(s) 8, 538, 1704, 2331
Bse3DI GCAATG 3 cut(s) 2190, 2266, 2703
BseAI TCCGGA 1 cut(s) 1118
BseBI CCWGG 3 cut(s) 619, 1653, 1927
BseDI CCNNGG 8 cut(s) 279, 386, 548, 920, 1652, 1925, 2413, 2543
BseGI GGATG 9 cut(s) 485, 586, 837, 1474, 1662, 1921, 2196, 2200, 2710
BseLI CCNNNNNNNGG 5 cut(s) 926, 1017, 2211, 2441, 2876
BseMI GCAATG 3 cut(s) 2190, 2266, 2703
BseMII CTCAG 8 cut(s) 140, 533, 806, 1036, 1217, 1598, 2040, 2586
BseNI ACTGG 4 cut(s) 8, 538, 1704, 2331
BseRI GAGGAG 3 cut(s) 37, 839, 2466
BseSI GKGCMC 2 cut(s) 2611, 2999
BseYI CCCAGC 3 cut(s) 71, 118, 762
BsgI GTGCAG 1 cut(s) 1782
Bsh1236I CGCG 5 cut(s) 778, 922, 1084, 1566, 2094
BshFI GGCC 4 cut(s) 303, 366, 1148, 2167
BshNI GGYRCC 1 cut(s) 4
BsiHKAI GWGCWC 1 cut(s) 2999
BsiHKCI CYCGRG 2 cut(s) 278, 1693
BsiSI CCGG 2 cut(s) 1119, 1580
BslFI GGGAC 3 cut(s) 135, 3124, 3129
BslI CCNNNNNNNGG 5 cut(s) 926, 1017, 2211, 2441, 2876
BsmAI GTCTC 3 cut(s) 702, 1319, 2998
BsmFI GGGAC 3 cut(s) 135, 3124, 3129
BsmI GAATGC 1 cut(s) 1348
BsnI GGCC 4 cut(s) 303, 366, 1148, 2167
Bso31I GGTCTC 1 cut(s) 702
BsoBI CYCGRG 2 cut(s) 278, 1693
Bsp119I TTCGAA 1 cut(s) 2125
Bsp1286I GDGCHC 3 cut(s) 1023, 2611, 2999
Bsp13I TCCGGA 1 cut(s) 1118
Bsp1407I TGTACA 1 cut(s) 559
Bsp143I GATC 7 cut(s) 322, 1811, 2245, 2760, 2879, 3087, 3120
Bsp1720I GCTNAGC 1 cut(s) 2396
Bsp68I TCGCGA 1 cut(s) 778
BspACI CCGC 8 cut(s) 169, 920, 922, 1082, 2071, 2092, 2400, 2442
BspANI GGCC 4 cut(s) 303, 366, 1148, 2167
BspCNI CTCAG 8 cut(s) 139, 532, 805, 1035, 1216, 1597, 2041, 2587
BspEI TCCGGA 1 cut(s) 1118
BspFNI CGCG 5 cut(s) 778, 922, 1084, 1566, 2094
BspHI TCATGA 2 cut(s) 2221, 2982
BspLI GGNNCC 6 cut(s) 6, 123, 555, 918, 1698, 2649
BspMAI CTGCAG 1 cut(s) 1749
BspMI ACCTGC 1 cut(s) 210
BspPI GGATC 3 cut(s) 2755, 2887, 3128
BspQI GCTCTTC 1 cut(s) 2061
BspT104I TTCGAA 1 cut(s) 2125
BspT107I GGYRCC 1 cut(s) 4
BspTNI GGTCTC 1 cut(s) 702
BsrBI CCGCTC 1 cut(s) 2071
BsrDI GCAATG 3 cut(s) 2190, 2266, 2703
BsrGI TGTACA 1 cut(s) 559
BsrI ACTGG 4 cut(s) 8, 538, 1704, 2331
BssECI CCNNGG 8 cut(s) 279, 386, 548, 920, 1652, 1925, 2413, 2543
BssMI GATC 7 cut(s) 322, 1811, 2245, 2760, 2879, 3087, 3120
BssSI CACGAG 2 cut(s) 504, 2825
BssT1I CCWWGG 2 cut(s) 386, 2413
Bst2BI CACGAG 2 cut(s) 504, 2825
Bst2UI CCWGG 3 cut(s) 619, 1653, 1927
Bst4CI ACNGT 7 cut(s) 332, 459, 806, 1606, 2088, 2242, 3009
Bst6I CTCTTC 3 cut(s) 1733, 2061, 2273
BstAPI GCANNNNNTGC 1 cut(s) 1007
BstAUI TGTACA 1 cut(s) 559
BstBAI YACGTR 3 cut(s) 98, 1802, 1966
BstBI TTCGAA 1 cut(s) 2125
BstDSI CCRYGG 3 cut(s) 548, 920, 2543
BstF5I GGATG 9 cut(s) 485, 586, 837, 1474, 1662, 1921, 2196, 2200, 2710
BstFNI CGCG 5 cut(s) 778, 922, 1084, 1566, 2094
BstH2I RGCGCY 1 cut(s) 2618
BstHHI GCGC 5 cut(s) 405, 1086, 1568, 2617, 2692
BstKTI GATC 7 cut(s) 325, 1814, 2248, 2763, 2882, 3090, 3123
BstMAI GTCTC 3 cut(s) 702, 1319, 2998
BstMBI GATC 7 cut(s) 322, 1811, 2245, 2760, 2879, 3087, 3120
BstNI CCWGG 3 cut(s) 619, 1653, 1927
BstNSI RCATGY 6 cut(s) 530, 1005, 2314, 2338, 2627, 2834
BstPAI GACNNNNGTC 1 cut(s) 1695
BstSCI CCNGG 3 cut(s) 617, 1651, 1925
BstSFI CTRYAG 5 cut(s) 294, 1745, 2151, 2618, 3091
BstSLI GKGCMC 2 cut(s) 2611, 2999
BstSNI TACGTA 1 cut(s) 98
BstUI CGCG 5 cut(s) 778, 922, 1084, 1566, 2094
BstX2I RGATCY 1 cut(s) 1811
BstYI RGATCY 1 cut(s) 1811
BsuI GTATCC 1 cut(s) 1390
BsuRI GGCC 4 cut(s) 303, 366, 1148, 2167
BtgI CCRYGG 3 cut(s) 548, 920, 2543
BtgZI GCGATG 1 cut(s) 326
BtrI CACGTC 1 cut(s) 1880
BtsCI GGATG 9 cut(s) 485, 586, 837, 1474, 1662, 1921, 2196, 2200, 2710
BtsI GCAGTG 2 cut(s) 358, 1012
BtsIMutI CAGTG 9 cut(s) 134, 337, 358, 531, 802, 1012, 1383, 2238, 2324
BtuMI TCGCGA 1 cut(s) 778
BveI ACCTGC 1 cut(s) 210
CaiI CAGNNNCTG 1 cut(s) 2888
CciI TCATGA 2 cut(s) 2221, 2982
CfoI GCGC 5 cut(s) 405, 1086, 1568, 2617, 2692
Cfr13I GGNCC 3 cut(s) 122, 132, 1697
Cfr42I CCGCGG 1 cut(s) 923
CseI GACGC 3 cut(s) 1659, 1999, 3050
Csp6I GTAC 7 cut(s) 383, 543, 560, 1460, 2089, 3010, 3146
CviQI GTAC 7 cut(s) 383, 543, 560, 1460, 2089, 3010, 3146
DpnI GATC 7 cut(s) 324, 1813, 2247, 2762, 2881, 3089, 3122
DpnII GATC 7 cut(s) 322, 1811, 2245, 2760, 2879, 3087, 3120
DraI TTTAAA 2 cut(s) 2319, 2907
DrdI GACNNNNNNGTC 2 cut(s) 1995, 3047
DseDI GACNNNNNNGTC 2 cut(s) 1995, 3047
EaeI YGGCCR 2 cut(s) 1146, 2165
Eam1104I CTCTTC 3 cut(s) 1733, 2061, 2273
EarI CTCTTC 3 cut(s) 1733, 2061, 2273
Eco105I TACGTA 1 cut(s) 98
Eco130I CCWWGG 2 cut(s) 386, 2413
Eco24I GRGCYC 1 cut(s) 1023
Eco31I GGTCTC 1 cut(s) 702
Eco47I GGWCC 3 cut(s) 122, 132, 1697
Eco47III AGCGCT 1 cut(s) 2616
Eco57I CTGAAG 2 cut(s) 360, 2931
Eco72I CACGTG 1 cut(s) 1966
Eco88I CYCGRG 2 cut(s) 278, 1693
EcoO109I RGGNCCY 1 cut(s) 122
EcoRII CCWGG 3 cut(s) 617, 1651, 1925
EcoT14I CCWWGG 2 cut(s) 386, 2413
EcoT22I ATGCAT 1 cut(s) 682
EcoT38I GRGCYC 1 cut(s) 1023
ErhI CCWWGG 2 cut(s) 386, 2413
FaqI GGGAC 3 cut(s) 135, 3124, 3129
FauI CCCGC 2 cut(s) 2064, 2393
FbaI TGATCA 1 cut(s) 2245
FblI GTMKAC 2 cut(s) 939, 2032
FokI GGATG 9 cut(s) 492, 593, 844, 1481, 1669, 1908, 2183, 2187, 2717
FriOI GRGCYC 1 cut(s) 1023
FspBI CTAG 6 cut(s) 1248, 1428, 1463, 2136, 2535, 2660
GlaI GCGC 5 cut(s) 404, 1085, 1567, 2616, 2691
GsaI CCCAGC 3 cut(s) 75, 122, 766
GsuI CTGGAG 3 cut(s) 420, 1461, 3000
HaeII RGCGCY 1 cut(s) 2618
HaeIII GGCC 4 cut(s) 303, 366, 1148, 2167
HapII CCGG 2 cut(s) 1119, 1580
HgaI GACGC 3 cut(s) 1659, 1999, 3050
HhaI GCGC 5 cut(s) 405, 1086, 1568, 2617, 2692
Hin6I GCGC 5 cut(s) 403, 1084, 1566, 2615, 2690
HinP1I GCGC 5 cut(s) 403, 1084, 1566, 2615, 2690
HincII GTYRAC 1 cut(s) 229
HindII GTYRAC 1 cut(s) 229
HindIII AAGCTT 3 cut(s) 1753, 1847, 3055
HpaII CCGG 2 cut(s) 1119, 1580
HphI GGTGA 8 cut(s) 34, 462, 708, 741, 1071, 1665, 2501, 2950
Hpy99I CGWCG 1 cut(s) 1884
HpyCH4III ACNGT 7 cut(s) 332, 459, 806, 1606, 2088, 2242, 3009
HspAI GCGC 5 cut(s) 403, 1084, 1566, 2615, 2690
Kpn2I TCCGGA 1 cut(s) 1118
Ksp22I TGATCA 1 cut(s) 2245
KspI CCGCGG 1 cut(s) 923
Kzo9I GATC 7 cut(s) 322, 1811, 2245, 2760, 2879, 3087, 3120
LguI GCTCTTC 1 cut(s) 2061
LmnI GCTCC 7 cut(s) 818, 922, 1121, 1480, 2007, 2506, 2647
MaeI CTAG 6 cut(s) 1248, 1428, 1463, 2136, 2535, 2660
MaeIII GTNAC 3 cut(s) 1671, 1976, 3049
MalI GATC 7 cut(s) 324, 1813, 2247, 2762, 2881, 3089, 3122
MbiI CCGCTC 1 cut(s) 2071
MboI GATC 7 cut(s) 322, 1811, 2245, 2760, 2879, 3087, 3120
MfeI CAATTG 1 cut(s) 462
MflI RGATCY 1 cut(s) 1811
MhlI GDGCHC 3 cut(s) 1023, 2611, 2999
MlyI GAGTC 7 cut(s) 854, 945, 1196, 1685, 1750, 2196, 3121
MmeI TCCRAC 2 cut(s) 1596, 1724
Mph1103I ATGCAT 1 cut(s) 682
MroI TCCGGA 1 cut(s) 1118
MroXI GAANNNNTTC 1 cut(s) 626
MslI CAYNNNNRTG 3 cut(s) 330, 2829, 2835
MspA1I CMGCKG 2 cut(s) 922, 3020
MspI CCGG 2 cut(s) 1119, 1580
MspR9I CCNGG 3 cut(s) 619, 1653, 1927
MunI CAATTG 1 cut(s) 462
Mva1269I GAATGC 1 cut(s) 1348
MvaI CCWGG 3 cut(s) 619, 1653, 1927
MvnI CGCG 5 cut(s) 778, 922, 1084, 1566, 2094
NdeII GATC 7 cut(s) 322, 1811, 2245, 2760, 2879, 3087, 3120
NlaIV GGNNCC 6 cut(s) 6, 123, 555, 918, 1698, 2649
NmeAIII GCCGAG 2 cut(s) 869, 2143
NmuCI GTSAC 3 cut(s) 1671, 1976, 3049
NruI TCGCGA 1 cut(s) 778
NsiI ATGCAT 1 cut(s) 682
NspI RCATGY 6 cut(s) 530, 1005, 2314, 2338, 2627, 2834
NspV TTCGAA 1 cut(s) 2125
PaeI GCATGC 3 cut(s) 1005, 2314, 2627
PagI TCATGA 2 cut(s) 2221, 2982
PciSI GCTCTTC 1 cut(s) 2061
PcsI WCGNNNNNNNCGW 1 cut(s) 1236
PctI GAATGC 1 cut(s) 1348
PdmI GAANNNNTTC 1 cut(s) 626
PleI GAGTC 7 cut(s) 854, 944, 1195, 1685, 1749, 2195, 3121
PmaCI CACGTG 1 cut(s) 1966
PmlI CACGTG 1 cut(s) 1966
PpsI GAGTC 7 cut(s) 854, 944, 1195, 1685, 1749, 2195, 3121
Ppu21I YACGTR 3 cut(s) 98, 1802, 1966
PpuMI RGGWCCY 1 cut(s) 122
PshAI GACNNNNGTC 1 cut(s) 1695
PsiI TTATAA 1 cut(s) 2577
Psp5II RGGWCCY 1 cut(s) 122
Psp6I CCWGG 3 cut(s) 617, 1651, 1925
PspCI CACGTG 1 cut(s) 1966
PspFI CCCAGC 3 cut(s) 71, 118, 762
PspGI CCWGG 3 cut(s) 617, 1651, 1925
PspN4I GGNNCC 6 cut(s) 6, 123, 555, 918, 1698, 2649
PspPI GGNCC 3 cut(s) 122, 132, 1697
PspPPI RGGWCCY 1 cut(s) 122
PstI CTGCAG 1 cut(s) 1749
PstNI CAGNNNCTG 1 cut(s) 2888
PsuI RGATCY 1 cut(s) 1811
PvuII CAGCTG 1 cut(s) 3020
RruI TCGCGA 1 cut(s) 778
RsaI GTAC 7 cut(s) 384, 544, 561, 1461, 2090, 3011, 3147
RsaNI GTAC 7 cut(s) 383, 543, 560, 1460, 2089, 3010, 3146
RseI CAYNNNNRTG 3 cut(s) 330, 2829, 2835
SacII CCGCGG 1 cut(s) 923
SapI GCTCTTC 1 cut(s) 2061
Sau3AI GATC 7 cut(s) 322, 1811, 2245, 2760, 2879, 3087, 3120
Sau96I GGNCC 3 cut(s) 122, 132, 1697
SchI GAGTC 7 cut(s) 854, 945, 1196, 1685, 1750, 2196, 3121
ScrFI CCNGG 3 cut(s) 619, 1653, 1927
SduI GDGCHC 3 cut(s) 1023, 2611, 2999
SfcI CTRYAG 5 cut(s) 294, 1745, 2151, 2618, 3091
Sfr303I CCGCGG 1 cut(s) 923
SfuI TTCGAA 1 cut(s) 2125
SgrBI CCGCGG 1 cut(s) 923
SinI GGWCC 3 cut(s) 122, 132, 1697
SmiMI CAYNNNNRTG 3 cut(s) 330, 2829, 2835
SmlI CTYRAG 3 cut(s) 146, 1063, 1524
SmoI CTYRAG 3 cut(s) 146, 1063, 1524
SnaBI TACGTA 1 cut(s) 98
SpeI ACTAGT 2 cut(s) 1427, 2534
SphI GCATGC 3 cut(s) 1005, 2314, 2627
SsiI CCGC 8 cut(s) 169, 920, 922, 1082, 2071, 2092, 2400, 2442
SspMI CTAG 6 cut(s) 1248, 1428, 1463, 2136, 2535, 2660
StyD4I CCNGG 3 cut(s) 617, 1651, 1925
StyI CCWWGG 2 cut(s) 386, 2413
TaaI ACNGT 7 cut(s) 332, 459, 806, 1606, 2088, 2242, 3009
TatI WGTACW 1 cut(s) 559
TscAI CASTG 9 cut(s) 134, 337, 358, 538, 809, 1012, 1390, 2245, 2331
TseFI GTSAC 3 cut(s) 1671, 1976, 3049
Tsp45I GTSAC 3 cut(s) 1671, 1976, 3049
TspGWI ACGGA 3 cut(s) 192, 3014, 3133
TspRI CASTG 9 cut(s) 134, 337, 358, 538, 809, 1012, 1390, 2245, 2331
VneI GTGCAC 1 cut(s) 2995
VpaK11BI GGWCC 3 cut(s) 122, 132, 1697
XapI RAATTY 2 cut(s) 1177, 2232
XceI RCATGY 6 cut(s) 530, 1005, 2314, 2338, 2627, 2834
XmiI GTMKAC 2 cut(s) 939, 2032
XmnI GAANNNNTTC 1 cut(s) 626
XspI CTAG 6 cut(s) 1248, 1428, 1463, 2136, 2535, 2660
Zsp2I ATGCAT 1 cut(s) 682
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.