AT5G27610
MYB Family

binding, transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0002363
Physical Location & Seq
Forward (+)
9764135 .. 9769992
5858 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G27610.1

Sequence Viewer

Length: 2916 bp
ATGGCGCCTACTAGGAAGTCGAAGAGTGTGAACAAGCGTTTCACCAATGAAGCGTCTCCAGATATCAATTTTGGGAGCGCAAGCAAAACCAAGCAAAGAAAGAAGAAATTGGCTGATAAGCTGGGACCTCAGTGGACCAAAAGGGAGCTTGTGCGTTTCTATGATGCTTATAGGAAGTATGTGGGAGACTGGAAAAAGGTAGCTGCTGCAGTACGGAATAACCGGTCTGTTGAGATGGTCGAAACACTCTTTTGTATGAATCGGGCATACTTATCCTTGCCCGAGGGAACTGCTTCTGTAGCTGGCCTTATTGCAATGATGACTGATCACTACAGCGTCATGGAGGGGAGCGAAAGTGAAGGAGAAGACCATGATGCTTCTGAGGTAACGAGGAAACATCTGAAGCGCAAACGTCCTCAAGTTCTGCCTAGTGATTTTCGAGAAGAAGTTGTTCCACCACATTCAGTTGCATCAGTAGAAGGATGTCTCTCATTCTTGAAGCAGACACAAGCTTATGAAAAAAGGCAACGGGCCACTGGAAAACGTACACCTCGGTTTCTTGTCGCAATTACACATGAGAGGGATGATATAGAAGATTTTAGTCCACCAAATAAAAGAGCCAAGAAACAACTTGATGCCGATGATGATGCATCAAGAAGGGGAGGAGGGTCTCCATACAGAAGAAAAGAACTCAGTGAAATCACACCAACTAGGCTTAGGAAAACGTCACAAGCACAGGAAGCACAATTCAAGCACCCTGATAGTTCCATGTTTGAGAATGGGGTGAGAGATAGATGGCATAAAAAGGGAGCTGCTGATAGAGATGGTGCCTTGTTGATGGATATGGAAGGACTTGTTACCCAAAAGGAAAAAATTGTGAGAGTTGAAGAAGCAGAAGGAAATTATTCTGATGATGATGATGGATTAGGAGCTCTGAAGACATTGGCTGAAATGTCAGCTTCACTGGCTCCGGCTGGTTTGTTGGAATCAGAATCATCTCCACACTGGGAAGAAGAAAGAAAAACTAACAACGTGGATAAGAAATCTAACACTCTGGAAACCGTGTCAACAAGCCATCACAGAGAAAAAGCAAAACAAGCAGGACTAGAAGATAATCTCCTGCATGCAATTTCAGCCCCTGATAAAAGAAAACCGAAGTCTGTGCCGGAATCCGTTGATGGTAATGTTGTTTCCATCGAGGAGCTTCGCACTTCAAGCAGAAAACGTAAACCAAAGTTTCAGGTGCTAGATGTTGTAGCTCCAAAAGAGTCTACACAGGACAAATCTCTATATACTAAGGAATCGGCTGAAGTTGATAGTTTGAAGACTCCCGTCAAAGCAAGACGTTCTAGTCAAGGTCCAGCAAAACAGCTGAAAACTGCAAAGACCACGGTAGAATCTTCTTCAGCTAGTGATAAGAAAATAACTGGACCGGATGCAGTAGTGCCAGCTACACAAGTTTCAGCTTCGGGTCCAGAGACTTTGCCACAGAAACCACCAAACAGGCGTAAGATAAGTTTGAAGAAAAGTTTACAAGAAAGAGCTAAATCTTTAGAAACCACTCATGACAAACCACGTAGTTTCAAAAAACTTTCAGAACATGAATTACTACAGGAGAAGTTGTCAAATTGTCTGTCATATCCATTGGTACGTCGATGGTGCATATATGAATGGTTCTACAGTGCTATTGACTATCCCTGGTTTGCAAAGATGGAGTTCACTGATTATCTAAATCATGTGGGGCTTGGTCACGCTCCAAGACTTACTCGTGTTGAATGGAGTGTCATTAAAAGTTCTCTCGGTAGACCTCGGAGATTGTCTCAGAGATTCCTACAGGATGAGCGGGATAAACTCCAAGAATATCGTGAGTCTGTGAGAAAGCATTATACAGAGCTGCGTGGATGTGCTACGGGAGTGCTTCATACAGATTTGGCCCGTCCTTTATCAGTCGGGAATAGAGTGATTGCCATCCATCCTAAAACACGGGAGATTCGTGATGGCAAGATTCTTACTGTGGATCATAACAAGTGCAACGTTCTCTTTGATGAATTGGGTGTCGAGTTAGTTATGGACATTGACTGCATGCCTTTAAATCCATTGGAATACATGCCAGAGGGTCTAAGGAGGCAAATTGATAAGTGCTTGGCTATATGCAAAGAAGCAAGGCTTAACAGACACCCAAGCTCTGATGCATCTGTTCTGTTCTCTCCTTCTGTGCTTGAAAATGTCAACTTTTCCATGAATCCTCCTCCTGCGAAACAGGATGATATCAGAGAGCCAGTTTTGTATGGTAAAGTAATAGCAACCAACACTACTGATCAATCTATCGTAATCAATAGCAAAGTAACAGGAACAGAAATTCAACGGACTCTGGCACTGCAGCATACTTCCGATGCGCAGGAAATGGAGCCAGAAATGATTGAAATTGTCATTGAATCAAAGTCAATAGCGCAAGCAATGGTGGATGCAGCTATAAAGGCTGCATCGTCGGGGAAGAACAATGAAGACTCAGAGAATATGGTTCACCAAGCTTTAAGCTCCATTGGCGAACATCAGCCATTAGACAACTCTATAGTGCCTGGTATCAAGCATCAAGAGTATACCAATGGCAGCTTGGATCATCATTCCTTAAACACAGCAGAGCCGATGAGTAACGGTTTCATCTCACAGGAAGGATCAGGAAAAAACAAAACACCAATGCCTTCAGAGCTTATCACCTCTTGTGTTGCATCTTGGCTCATGATGCAGATGATCTCAAAGAAGCAGTACCCACCAGCAGATGTGGCTCAGCTAATGGATACAGTAGTGAATGACTTGCAGCCACGGTGTCCACAGAATATGCCGATATACAGAGAAATTCAAACTTGTATGGGATTGATCAAGACTCAAATAATGGCTCTTGTAAGAACGTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04218 map04218
Pfam Domains
Protein Families
DIRP Myb_DNA-binding

Protein Analysis

971

Amino Acids

109.09

Weight (kDa)

8.91

Isoelectric Point (pI)

48.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIRP PF06584 558 - 659 7.2e-30 DIRP
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1350
Acc16I TGCGCA 1 cut(s) 2397
AccB1I GGYRCC 2 cut(s) 4, 827
AccBSI CCGCTC 1 cut(s) 1843
AccI GTMKAC 3 cut(s) 1271, 1804, 2600
AciI CCGC 1 cut(s) 1843
AclI AACGTT 1 cut(s) 2034
AclWI GGATC 3 cut(s) 2025, 2625, 2683
AcsI RAATTY 2 cut(s) 2358, 2856
AcuI CTGAAG 5 cut(s) 422, 956, 1329, 1389, 2688
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 4 cut(s) 213, 547, 1650, 2768
AgeI ACCGGT 1 cut(s) 222
AjnI CCWGG 2 cut(s) 1697, 2578
Alw21I GWGCWC 1 cut(s) 934
Alw26I GTCTC 6 cut(s) 60, 180, 491, 675, 1472, 1824
AlwI GGATC 3 cut(s) 2025, 2625, 2683
AlwNI CAGNNNCTG 1 cut(s) 1139
Ama87I CYCGRG 1 cut(s) 281
AoxI GGCC 3 cut(s) 304, 531, 1932
ApeKI GCWGC 9 cut(s) 203, 206, 812, 1894, 2380, 2468, 2480, 2610, 2818
ApoI RAATTY 2 cut(s) 2358, 2856
ArsI GACNNNNNNTTYG 2 cut(s) 1619, 1651
AsiGI ACCGGT 1 cut(s) 222
Asp700I GAANNNNTTC 3 cut(s) 292, 450, 904
AspLEI GCGC 5 cut(s) 7, 80, 408, 2398, 2452
AspS9I GGNCC 7 cut(s) 125, 135, 531, 1358, 1430, 1472, 1933
AsuHPI GGTGA 4 cut(s) 34, 796, 2516, 2707
AvaI CYCGRG 1 cut(s) 281
AvaII GGWCC 5 cut(s) 125, 135, 1358, 1430, 1472
BaeI ACNNNNGTAYC 2 cut(s) 2790, 2823
BanI GGYRCC 2 cut(s) 4, 827
BanII GRGCYC 1 cut(s) 934
BauI CACGAG 1 cut(s) 1767
BbsI GAAGAC 4 cut(s) 372, 944, 1331, 2511
Bbv12I GWGCWC 1 cut(s) 934
BbvI GCAGC 9 cut(s) 190, 193, 799, 1881, 2392, 2467, 2480, 2622, 2830
BcgI CGANNNNNNTGC 6 cut(s) 272, 306, 629, 663, 1144, 1178
BciT130I CCWGG 2 cut(s) 1699, 2580
BciVI GTATCC 1 cut(s) 2791
BclI TGATCA 3 cut(s) 325, 2317, 2877
BcoDI GTCTC 6 cut(s) 60, 180, 491, 675, 1472, 1824
BfaI CTAG 7 cut(s) 12, 429, 711, 1106, 1247, 1350, 1410
BfmI CTRYAG 8 cut(s) 207, 297, 331, 1610, 1678, 1832, 2378, 2571
BfoI RGCGCY 1 cut(s) 8
BfuI GTATCC 1 cut(s) 2791
BisI GCNGC 9 cut(s) 204, 207, 813, 1895, 2381, 2469, 2481, 2611, 2819
BlpI GCTNAGC 1 cut(s) 2787
BlsI GCNGC 9 cut(s) 205, 208, 814, 1896, 2382, 2470, 2482, 2612, 2820
Bme1390I CCNGG 2 cut(s) 1699, 2580
Bme18I GGWCC 5 cut(s) 125, 135, 1358, 1430, 1472
BmeT110I CYCGRG 1 cut(s) 281
BmgT120I GGNCC 7 cut(s) 125, 135, 531, 1358, 1430, 1472, 1933
BmiI GGNNCC 6 cut(s) 6, 126, 829, 969, 1473, 2409
BmrFI CCNGG 2 cut(s) 1699, 2580
BmrI ACTGGG 1 cut(s) 1015
BmuI ACTGGG 1 cut(s) 1015
BoxI GACNNNNGTC 1 cut(s) 1331
BpiI GAAGAC 4 cut(s) 372, 944, 1331, 2511
BplI GAGNNNNNCTC 2 cut(s) 1804, 1836
BpmI CTGGAG 1 cut(s) 42
Bpu10I CCTNAGC 1 cut(s) 716
Bpu1102I GCTNAGC 1 cut(s) 2787
BpuEI CTTGAG 1 cut(s) 402
BsaAI YACGTR 1 cut(s) 1577
BsaBI GATNNNNATC 1 cut(s) 1967
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 675
BsaJI CCNNGG 6 cut(s) 282, 551, 1389, 1697, 1808, 2822
BsaWI WCCGGW 2 cut(s) 222, 1432
BsaXI ACNNNNNCTCC 4 cut(s) 340, 370, 1607, 1637
Bse118I RCCGGY 1 cut(s) 222
Bse1I ACTGG 6 cut(s) 194, 541, 969, 1010, 1432, 2279
Bse3DI GCAATG 2 cut(s) 321, 2463
Bse8I GATNNNNATC 1 cut(s) 1967
BseBI CCWGG 2 cut(s) 1699, 2580
BseDI CCNNGG 6 cut(s) 282, 551, 1389, 1697, 1808, 2822
BseGI GGATG 9 cut(s) 488, 589, 1441, 1843, 1907, 1968, 1972, 2269, 2470
BseJI GATNNNNATC 1 cut(s) 1967
BseMI GCAATG 2 cut(s) 321, 2463
BseMII CTCAG 6 cut(s) 143, 372, 706, 1835, 2523, 2801
BseNI ACTGG 6 cut(s) 194, 541, 969, 1010, 1432, 2279
BseRI GAGGAG 3 cut(s) 678, 1214, 2238
BseXI GCAGC 9 cut(s) 190, 193, 799, 1881, 2392, 2467, 2480, 2622, 2830
BseYI CCCAGC 1 cut(s) 121
BshFI GGCC 3 cut(s) 306, 533, 1934
BshNI GGYRCC 2 cut(s) 4, 827
BshTI ACCGGT 1 cut(s) 222
BsiHKAI GWGCWC 1 cut(s) 934
BsiHKCI CYCGRG 1 cut(s) 281
BsiSI CCGG 4 cut(s) 223, 971, 1166, 1433
BslFI GGGAC 1 cut(s) 138
BsmAI GTCTC 6 cut(s) 60, 180, 491, 675, 1472, 1824
BsmBI CGTCTC 1 cut(s) 60
BsmFI GGGAC 1 cut(s) 138
BsnI GGCC 3 cut(s) 306, 533, 1934
Bso31I GGTCTC 1 cut(s) 675
BsoBI CYCGRG 1 cut(s) 281
Bsp1286I GDGCHC 1 cut(s) 934
Bsp143I GATC 7 cut(s) 325, 2017, 2317, 2617, 2675, 2751, 2877
Bsp1720I GCTNAGC 1 cut(s) 2787
BspACI CCGC 1 cut(s) 1843
BspANI GGCC 3 cut(s) 306, 533, 1934
BspCNI CTCAG 6 cut(s) 142, 373, 705, 1834, 2522, 2800
BspHI TCATGA 3 cut(s) 1564, 2739, 2912
BspLI GGNNCC 6 cut(s) 6, 126, 829, 969, 1473, 2409
BspMAI CTGCAG 2 cut(s) 211, 2382
BspPI GGATC 3 cut(s) 2025, 2625, 2683
BspT107I GGYRCC 2 cut(s) 4, 827
BspTNI GGTCTC 1 cut(s) 675
BsrBI CCGCTC 1 cut(s) 1843
BsrDI GCAATG 2 cut(s) 321, 2463
BsrFI RCCGGY 1 cut(s) 222
BsrI ACTGG 6 cut(s) 194, 541, 969, 1010, 1432, 2279
BssAI RCCGGY 1 cut(s) 222
BssECI CCNNGG 6 cut(s) 282, 551, 1389, 1697, 1808, 2822
BssMI GATC 7 cut(s) 325, 2017, 2317, 2617, 2675, 2751, 2877
BssNAI GTATAC 1 cut(s) 2601
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 1767
Bst1107I GTATAC 1 cut(s) 2601
Bst2BI CACGAG 1 cut(s) 1767
Bst2UI CCWGG 2 cut(s) 1699, 2580
Bst4CI ACNGT 7 cut(s) 1063, 1393, 1682, 2014, 2657, 2803, 2826
Bst6I CTCTTC 1 cut(s) 17
BstACI GRCGYC 1 cut(s) 5
BstBAI YACGTR 1 cut(s) 1577
BstC8I GCNNGC 6 cut(s) 82, 304, 1125, 1449, 2084, 2454
BstDEI CTNAG 9 cut(s) 129, 381, 692, 716, 1296, 1821, 2120, 2509, 2787
BstDSI CCRYGG 2 cut(s) 1389, 2822
BstF5I GGATG 9 cut(s) 488, 589, 1441, 1843, 1907, 1968, 1972, 2269, 2470
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 5 cut(s) 7, 80, 408, 2398, 2452
BstKTI GATC 7 cut(s) 328, 2020, 2320, 2620, 2678, 2754, 2880
BstMAI GTCTC 6 cut(s) 60, 180, 491, 675, 1472, 1824
BstMBI GATC 7 cut(s) 325, 2017, 2317, 2617, 2675, 2751, 2877
BstNI CCWGG 2 cut(s) 1699, 2580
BstNSI RCATGY 3 cut(s) 1127, 2086, 2110
BstPAI GACNNNNGTC 1 cut(s) 1331
BstSCI CCNGG 2 cut(s) 1697, 2578
BstSFI CTRYAG 8 cut(s) 207, 297, 331, 1610, 1678, 1832, 2378, 2571
BstV1I GCAGC 9 cut(s) 190, 193, 799, 1881, 2392, 2467, 2480, 2622, 2830
BstV2I GAAGAC 4 cut(s) 372, 944, 1331, 2511
BstZ17I GTATAC 1 cut(s) 2601
BsuI GTATCC 1 cut(s) 2791
BsuRI GGCC 3 cut(s) 306, 533, 1934
BtgI CCRYGG 2 cut(s) 1389, 2822
BtsCI GGATG 9 cut(s) 488, 589, 1441, 1843, 1907, 1968, 1972, 2269, 2470
BtsI GCAGTG 1 cut(s) 2375
BtsIMutI CAGTG 8 cut(s) 137, 534, 700, 962, 1003, 1687, 1719, 2375
Cac8I GCNNGC 6 cut(s) 82, 304, 1125, 1449, 2084, 2454
CaiI CAGNNNCTG 1 cut(s) 1139
CciI TCATGA 3 cut(s) 1564, 2739, 2912
CfoI GCGC 5 cut(s) 7, 80, 408, 2398, 2452
Cfr10I RCCGGY 1 cut(s) 222
Cfr13I GGNCC 7 cut(s) 125, 135, 531, 1358, 1430, 1472, 1933
CseI GACGC 2 cut(s) 42, 325
Csp6I GTAC 4 cut(s) 212, 546, 1649, 2767
CspAI ACCGGT 1 cut(s) 222
CviQI GTAC 4 cut(s) 212, 546, 1649, 2767
DdeI CTNAG 9 cut(s) 129, 381, 692, 716, 1296, 1821, 2120, 2509, 2787
DinI GGCGCC 1 cut(s) 6
DpnI GATC 7 cut(s) 327, 2019, 2319, 2619, 2677, 2753, 2879
DpnII GATC 7 cut(s) 325, 2017, 2317, 2617, 2675, 2751, 2877
DraI TTTAAA 1 cut(s) 2091
DrdI GACNNNNNNGTC 1 cut(s) 1350
DseDI GACNNNNNNGTC 1 cut(s) 1350
Eam1104I CTCTTC 1 cut(s) 17
EarI CTCTTC 1 cut(s) 17
Ecl136II GAGCTC 1 cut(s) 932
Eco24I GRGCYC 1 cut(s) 934
Eco31I GGTCTC 1 cut(s) 675
Eco32I GATATC 2 cut(s) 64, 2269
Eco47I GGWCC 5 cut(s) 125, 135, 1358, 1430, 1472
Eco53kI GAGCTC 1 cut(s) 932
Eco57I CTGAAG 5 cut(s) 422, 956, 1329, 1389, 2688
Eco88I CYCGRG 1 cut(s) 281
EcoICRI GAGCTC 1 cut(s) 932
EcoO109I RGGNCCY 1 cut(s) 125
EcoRII CCWGG 2 cut(s) 1697, 2578
EcoRV GATATC 2 cut(s) 64, 2269
EcoT22I ATGCAT 2 cut(s) 652, 2194
EcoT38I GRGCYC 1 cut(s) 934
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
Esp3I CGTCTC 1 cut(s) 60
FalI AAGNNNNNCTT 2 cut(s) 2151, 2183
FaqI GGGAC 1 cut(s) 138
FauI CCCGC 1 cut(s) 1836
FbaI TGATCA 3 cut(s) 325, 2317, 2877
FblI GTMKAC 3 cut(s) 1271, 1804, 2600
Fnu4HI GCNGC 9 cut(s) 204, 207, 813, 1895, 2381, 2469, 2481, 2611, 2819
FokI GGATG 9 cut(s) 495, 596, 1448, 1850, 1914, 1955, 1959, 2276, 2477
FriOI GRGCYC 1 cut(s) 934
Fsp4HI GCNGC 9 cut(s) 204, 207, 813, 1895, 2381, 2469, 2481, 2611, 2819
FspBI CTAG 7 cut(s) 12, 429, 711, 1106, 1247, 1350, 1410
FspI TGCGCA 1 cut(s) 2397
GlaI GCGC 5 cut(s) 6, 79, 407, 2397, 2451
GluI GCNGC 9 cut(s) 204, 207, 813, 1895, 2381, 2469, 2481, 2611, 2819
GsaI CCCAGC 1 cut(s) 125
GsuI CTGGAG 1 cut(s) 42
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 3 cut(s) 306, 533, 1934
HapII CCGG 4 cut(s) 223, 971, 1166, 1433
HgaI GACGC 2 cut(s) 42, 325
HhaI GCGC 5 cut(s) 7, 80, 408, 2398, 2452
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 5 cut(s) 5, 78, 406, 2396, 2450
HinP1I GCGC 5 cut(s) 5, 78, 406, 2396, 2450
HincII GTYRAC 2 cut(s) 1068, 2230
HindII GTYRAC 2 cut(s) 1068, 2230
HindIII AAGCTT 2 cut(s) 510, 2529
HpaII CCGG 4 cut(s) 223, 971, 1166, 1433
HphI GGTGA 4 cut(s) 34, 796, 2516, 2707
Hpy99I CGWCG 2 cut(s) 1656, 2491
HpyAV CCTTC 8 cut(s) 353, 473, 651, 842, 890, 2220, 2666, 2712
HpyCH4III ACNGT 7 cut(s) 1063, 1393, 1682, 2014, 2657, 2803, 2826
HpyF3I CTNAG 9 cut(s) 129, 381, 692, 716, 1296, 1821, 2120, 2509, 2787
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 5 cut(s) 5, 78, 406, 2396, 2450
KasI GGCGCC 1 cut(s) 4
Ksp22I TGATCA 3 cut(s) 325, 2317, 2877
Kzo9I GATC 7 cut(s) 325, 2017, 2317, 2617, 2675, 2751, 2877
Lsp1109I GCAGC 9 cut(s) 190, 193, 799, 1881, 2392, 2467, 2480, 2622, 2830
MaeI CTAG 7 cut(s) 12, 429, 711, 1106, 1247, 1350, 1410
MaeIII GTNAC 6 cut(s) 385, 726, 856, 1748, 2344, 2651
MalI GATC 7 cut(s) 327, 2019, 2319, 2619, 2677, 2753, 2879
MbiI CCGCTC 1 cut(s) 1843
MboI GATC 7 cut(s) 325, 2017, 2317, 2617, 2675, 2751, 2877
MhlI GDGCHC 1 cut(s) 934
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 6 cut(s) 1277, 1321, 1877, 2362, 2501, 2878
MmeI TCCRAC 1 cut(s) 963
Mph1103I ATGCAT 2 cut(s) 652, 2194
MroXI GAANNNNTTC 3 cut(s) 292, 450, 904
MseI TTAA 5 cut(s) 1788, 2090, 2169, 2534, 2630
MspA1I CMGCKG 1 cut(s) 1372
MspI CCGG 4 cut(s) 223, 971, 1166, 1433
MspR9I CCNGG 2 cut(s) 1699, 2580
MvaI CCWGG 2 cut(s) 1699, 2580
NarI GGCGCC 1 cut(s) 5
NdeII GATC 7 cut(s) 325, 2017, 2317, 2617, 2675, 2751, 2877
NlaIV GGNNCC 6 cut(s) 6, 126, 829, 969, 1473, 2409
NmuCI GTSAC 2 cut(s) 726, 1748
NsbI TGCGCA 1 cut(s) 2397
NsiI ATGCAT 2 cut(s) 652, 2194
NspI RCATGY 3 cut(s) 1127, 2086, 2110
PaeI GCATGC 2 cut(s) 1127, 2086
PagI TCATGA 3 cut(s) 1564, 2739, 2912
PcsI WCGNNNNNNNCGW 1 cut(s) 1990
PdmI GAANNNNTTC 3 cut(s) 292, 450, 904
PinAI ACCGGT 1 cut(s) 222
PkrI GCNGC 9 cut(s) 205, 208, 814, 1896, 2382, 2470, 2482, 2612, 2820
PleI GAGTC 6 cut(s) 1276, 1321, 1876, 2362, 2501, 2878
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 6 cut(s) 1276, 1321, 1876, 2362, 2501, 2878
Ppu21I YACGTR 1 cut(s) 1577
PpuMI RGGWCCY 1 cut(s) 125
PshAI GACNNNNGTC 1 cut(s) 1331
Psp124BI GAGCTC 1 cut(s) 934
Psp1406I AACGTT 1 cut(s) 2034
Psp5II RGGWCCY 1 cut(s) 125
Psp6I CCWGG 2 cut(s) 1697, 2578
PspFI CCCAGC 1 cut(s) 121
PspGI CCWGG 2 cut(s) 1697, 2578
PspN4I GGNNCC 6 cut(s) 6, 126, 829, 969, 1473, 2409
PspPI GGNCC 7 cut(s) 125, 135, 531, 1358, 1430, 1472, 1933
PspPPI RGGWCCY 1 cut(s) 125
PsrI GAACNNNNNNTAC 2 cut(s) 1590, 1622
PstI CTGCAG 2 cut(s) 211, 2382
PstNI CAGNNNCTG 1 cut(s) 1139
PvuII CAGCTG 1 cut(s) 1372
RsaI GTAC 4 cut(s) 213, 547, 1650, 2768
RsaNI GTAC 4 cut(s) 212, 546, 1649, 2767
SacI GAGCTC 1 cut(s) 934
SaqAI TTAA 5 cut(s) 1788, 2090, 2169, 2534, 2630
SatI GCNGC 9 cut(s) 204, 207, 813, 1895, 2381, 2469, 2481, 2611, 2819
Sau3AI GATC 7 cut(s) 325, 2017, 2317, 2617, 2675, 2751, 2877
Sau96I GGNCC 7 cut(s) 125, 135, 531, 1358, 1430, 1472, 1933
SchI GAGTC 6 cut(s) 1277, 1321, 1877, 2362, 2501, 2878
ScrFI CCNGG 2 cut(s) 1699, 2580
SduI GDGCHC 1 cut(s) 934
SfcI CTRYAG 8 cut(s) 207, 297, 331, 1610, 1678, 1832, 2378, 2571
SfoI GGCGCC 1 cut(s) 6
SinI GGWCC 5 cut(s) 125, 135, 1358, 1430, 1472
SmlI CTYRAG 1 cut(s) 417
SmoI CTYRAG 1 cut(s) 417
SphI GCATGC 2 cut(s) 1127, 2086
SsiI CCGC 1 cut(s) 1843
SspDI GGCGCC 1 cut(s) 4
SspMI CTAG 7 cut(s) 12, 429, 711, 1106, 1247, 1350, 1410
SstI GAGCTC 1 cut(s) 934
StyD4I CCNGG 2 cut(s) 1697, 2578
TaaI ACNGT 7 cut(s) 1063, 1393, 1682, 2014, 2657, 2803, 2826
TaqI TCGA 6 cut(s) 20, 240, 439, 1197, 1654, 2058
Tru1I TTAA 5 cut(s) 1788, 2090, 2169, 2534, 2630
Tru9I TTAA 5 cut(s) 1788, 2090, 2169, 2534, 2630
TscAI CASTG 8 cut(s) 137, 541, 700, 969, 1010, 1687, 1726, 2382
TseFI GTSAC 2 cut(s) 726, 1748
TseI GCWGC 9 cut(s) 203, 206, 812, 1894, 2380, 2468, 2480, 2610, 2818
Tsp45I GTSAC 2 cut(s) 726, 1748
TspGWI ACGGA 3 cut(s) 229, 1162, 2380
TspRI CASTG 8 cut(s) 137, 541, 700, 969, 1010, 1687, 1726, 2382
VpaK11BI GGWCC 5 cut(s) 125, 135, 1358, 1430, 1472
XapI RAATTY 2 cut(s) 2358, 2856
XceI RCATGY 3 cut(s) 1127, 2086, 2110
XcmI CCANNNNNNNNNTGG 1 cut(s) 2611
XmiI GTMKAC 3 cut(s) 1271, 1804, 2600
XmnI GAANNNNTTC 3 cut(s) 292, 450, 904
XspI CTAG 7 cut(s) 12, 429, 711, 1106, 1247, 1350, 1410
Zsp2I ATGCAT 2 cut(s) 652, 2194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.