Protein ALWAYS EARLY
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G05380 AT3G05380 AT3G05380 AT3G05380 AT3G05380 AT5G27610 |
| fragaria_vesca | FvH4_6g06170 FvH4_6g06170 FvH4_6g06170 FvH4_6g06170 FvH4_6g06170 FvH4_6g06170 FvH4_6g06170 FvH4_6g06170 FvH4_6g06170 FvH4_6g06170 FvH4_6g06170 FvH4_6g06170 FvH4_6g06170 |
| malus_domestica | MD04G1203700.v1.1 MD12G1217500.v1.1 |
| prunus_persica | Prupe.6G323800_v2.0.a1 Prupe.6G323800_v2.0.a1 Prupe.6G323800_v2.0.a1 Prupe.6G323800_v2.0.a1 Prupe.6G323800_v2.0.a1 Prupe.6G323800_v2.0.a1 |
| pyrus_communis | pycom04g18020 pycom12g20300 |
| rosa_chinensis | RchiOBHm_Chr3g0455181 |
| rosa_laevigata | RLG00000025380 |
| rosa_multiflora | Rmu_sc0002169.1_g000028 |
| rosa_roxburghii | Rroxscaffold_6G00424500 |
| rosa_rugosa | Rorug03G0004300 Rorug03G0004400 Rorug03G0004500 Rorug03G0004500 |
| rosa_samantha | Rh3AG065100 Rh3BG067200 Rh3CG065600 Rh3DG067200 |
| rosa_wichuraiana | Rw3G005110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 378 |
| AciI | CCGC | 1 cut(s) | 102 |
| AcsI | RAATTY | 4 cut(s) | 18, 29, 143, 362 |
| AflIII | ACRYGT | 1 cut(s) | 393 |
| AgsI | TTSAA | 5 cut(s) | 7, 23, 29, 113, 367 |
| AluBI | AGCT | 1 cut(s) | 150 |
| AluI | AGCT | 1 cut(s) | 150 |
| ApeKI | GCWGC | 1 cut(s) | 184 |
| ApoI | RAATTY | 4 cut(s) | 18, 29, 143, 362 |
| AsuHPI | GGTGA | 1 cut(s) | 271 |
| BbvCI | CCTCAGC | 1 cut(s) | 357 |
| BbvI | GCAGC | 1 cut(s) | 171 |
| BisI | GCNGC | 1 cut(s) | 185 |
| BlsI | GCNGC | 1 cut(s) | 186 |
| BmsI | GCATC | 1 cut(s) | 321 |
| Bpu10I | CCTNAGC | 1 cut(s) | 357 |
| BsaAI | YACGTR | 1 cut(s) | 394 |
| Bse1I | ACTGG | 2 cut(s) | 76, 292 |
| BseGI | GGATG | 1 cut(s) | 286 |
| BseMII | CTCAG | 2 cut(s) | 5, 348 |
| BseNI | ACTGG | 2 cut(s) | 76, 292 |
| BseRI | GAGGAG | 1 cut(s) | 309 |
| BseXI | GCAGC | 1 cut(s) | 171 |
| BspACI | CCGC | 1 cut(s) | 102 |
| BspCNI | CTCAG | 2 cut(s) | 6, 349 |
| BsrI | ACTGG | 2 cut(s) | 76, 292 |
| Bst6I | CTCTTC | 1 cut(s) | 286 |
| BstBAI | YACGTR | 1 cut(s) | 394 |
| BstC8I | GCNNGC | 2 cut(s) | 61, 314 |
| BstDEI | CTNAG | 2 cut(s) | 14, 357 |
| BstF5I | GGATG | 1 cut(s) | 286 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 147, 221 |
| BstNSI | RCATGY | 1 cut(s) | 165 |
| BstV1I | GCAGC | 1 cut(s) | 171 |
| BtsCI | GGATG | 1 cut(s) | 286 |
| Cac8I | GCNNGC | 2 cut(s) | 61, 314 |
| CviAII | CATG | 3 cut(s) | 162, 166, 382 |
| CviJI | RGCY | 7 cut(s) | 78, 83, 134, 150, 184, 224, 232 |
| CviKI_1 | RGCY | 7 cut(s) | 78, 83, 134, 150, 184, 224, 232 |
| DdeI | CTNAG | 2 cut(s) | 14, 357 |
| Eam1104I | CTCTTC | 1 cut(s) | 286 |
| EarI | CTCTTC | 1 cut(s) | 286 |
| EcoRI | GAATTC | 2 cut(s) | 18, 362 |
| EcoT22I | ATGCAT | 1 cut(s) | 167 |
| FaeI | CATG | 3 cut(s) | 165, 169, 385 |
| FaiI | YATR | 5 cut(s) | 44, 163, 167, 251, 383 |
| FatI | CATG | 3 cut(s) | 161, 165, 381 |
| FblI | GTMKAC | 1 cut(s) | 378 |
| Fnu4HI | GCNGC | 1 cut(s) | 185 |
| FokI | GGATG | 1 cut(s) | 293 |
| Fsp4HI | GCNGC | 1 cut(s) | 185 |
| GluI | GCNGC | 1 cut(s) | 185 |
| Hin1II | CATG | 3 cut(s) | 165, 169, 385 |
| HinfI | GANTC | 1 cut(s) | 254 |
| HphI | GGTGA | 1 cut(s) | 271 |
| Hpy166II | GTNNAC | 1 cut(s) | 379 |
| Hpy8I | GTNNAC | 1 cut(s) | 379 |
| HpyAV | CCTTC | 1 cut(s) | 196 |
| HpyCH4IV | ACGT | 1 cut(s) | 393 |
| HpyCH4V | TGCA | 4 cut(s) | 63, 165, 215, 326 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 147, 221 |
| HpyF3I | CTNAG | 2 cut(s) | 14, 357 |
| HpySE526I | ACGT | 1 cut(s) | 393 |
| Hsp92II | CATG | 3 cut(s) | 165, 169, 385 |
| LpnPI | CCDG | 4 cut(s) | 57, 230, 273, 326 |
| Lsp1109I | GCAGC | 1 cut(s) | 171 |
| LweI | GCATC | 1 cut(s) | 321 |
| MaeII | ACGT | 1 cut(s) | 393 |
| MaeIII | GTNAC | 1 cut(s) | 283 |
| MboII | GAAGA | 1 cut(s) | 303 |
| MluCI | AATT | 4 cut(s) | 18, 29, 143, 362 |
| MnlI | CCTC | 3 cut(s) | 163, 287, 352 |
| Mph1103I | ATGCAT | 1 cut(s) | 167 |
| MseI | TTAA | 2 cut(s) | 236, 344 |
| MslI | CAYNNNNRTG | 1 cut(s) | 164 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 147, 221 |
| NlaIII | CATG | 3 cut(s) | 165, 169, 385 |
| NsiI | ATGCAT | 1 cut(s) | 167 |
| NspI | RCATGY | 1 cut(s) | 165 |
| PfeI | GAWTC | 1 cut(s) | 254 |
| PkrI | GCNGC | 1 cut(s) | 186 |
| Ppu21I | YACGTR | 1 cut(s) | 394 |
| RseI | CAYNNNNRTG | 1 cut(s) | 164 |
| SaqAI | TTAA | 2 cut(s) | 236, 344 |
| SatI | GCNGC | 1 cut(s) | 185 |
| SetI | ASST | 2 cut(s) | 152, 396 |
| SfaNI | GCATC | 1 cut(s) | 321 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 164 |
| Sse9I | AATT | 4 cut(s) | 18, 29, 143, 362 |
| SsiI | CCGC | 1 cut(s) | 102 |
| TaiI | ACGT | 1 cut(s) | 396 |
| TaqI | TCGA | 1 cut(s) | 274 |
| TasI | AATT | 4 cut(s) | 18, 29, 143, 362 |
| TfiI | GAWTC | 1 cut(s) | 254 |
| Tru1I | TTAA | 2 cut(s) | 236, 344 |
| Tru9I | TTAA | 2 cut(s) | 236, 344 |
| TseI | GCWGC | 1 cut(s) | 184 |
| TspDTI | ATGAA | 1 cut(s) | 105 |
| XapI | RAATTY | 4 cut(s) | 18, 29, 143, 362 |
| XceI | RCATGY | 1 cut(s) | 165 |
| XmiI | GTMKAC | 1 cut(s) | 378 |
| Zsp2I | ATGCAT | 1 cut(s) | 167 |