Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0002363

Physical Location & Seq

Genomic Coordinates Reverse (-)

20180561 .. 20186227

Gene Structure 5667 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g18020.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2247 bp

ATGGCCCCAACAAGAAAAGCCAAAGGTGTAAAGCGGTATGCAACTGTAAATGAGGCATCTCCGGAGAAATATGGCGGAGGGTCAAACAAAAAGAAGCAACGGTGGAGCAATGGAGAGCTTCAGCGTTTTTATGATGCATACAGAAAATATGGAAAAGATTGGCGGAAGGTGGCTGCTGCAGTGCGCAACAGAAGCATTGAGATGGTGGAGGCTCTTTACAATATGAACCGAGCGTATTTGTCATTGCCAGAGGGAACAGCTTCTGTAGTTGGCCTTAAAGCGATGATGACAGATCACTATAATGTTATGGAAGGCAGTGATAGTGAAAGAGAGAGCAATGATGATTTAGGATTTTCTCGAAAGCCGCAGAAACGCAAGCTTGGGAAAGATCAGCCCAGTGTCTCGAAAGATGTTTTACACGCTCATCCAAGTGCATCGCTTGAAGGATGCCTATCATTACTAAAAAGGAGAAAGCTTGATGGTGACCAGCCTCGTGCAGTTGGAAAGAGGACACCTCGAGTCCCAATTTCGTATCCGCATAAGAAAGATGATAGGGAAGCTTATGTTTCTCCAATTAAAAAGGGTCGGAAGTCAGAGGGGGACAATGATGATGATATTGCGCATGTGGCAGCATTATTGACTGAGGCTTCGCAAAGAGGAGGCTCTCCCCAAGTTTCTCAAACGCCATACGGAAGACCTGTGCATATAAAATCTTCATCTGTCCAGAGCTCAGGAAGAATGCATCCACCACCAGGGAAAGCTCGTGCCAATCTTCGTCGTGCTTCAGTGGATGAAGACTGGTTGGAAGGTAGTTTGGGAAGTGGGGGCGCTGAAACTGGAGACGATGCCGGAGATTTGTTAGAAGGTGTAGGTACAGTAGACATGCCTTCGAAGGGGAACAAGTTGTATAAAAAGAGAGGGAAAGTTAAACACAGTGGGAATCATCAGTTTGATGATGGCGGGGAAGCATGCAGTGGCACTGAAGGACTTAATGTAAGTTCTAGGGCGATAGATGATAGTGAAGTTTCAAATACAAAAGGGGAACAACCTTCTCCACAAGGTCAAAGGAAGGAGAGCAAGAAACTTTATTTTGGAGATGAAAGCTCATGCTTGGATGCTCTGCAAACCTTAGCTGATTTGTCTCTGATGATGCCGGAATCAATGGAATCTGGATCATCTGTCCAGTTGAAAGATGAAGGGGCAAATGTTGATGCAGAAGATAAATTTAGTGTCCCTGAAGCCACATCTACAAGCCAATTCAGAAACAAAAATAAAATCCCCAGTGTAAAACATAGAGTGCCTTACACAATTTCTGGAGTTGAGGGTTCCAATTCCAAAAAATCCAAACTTGGGAGGGATCCAGCAGTTGATATGAATACTGTCTCTGAATCGGAACAACAGCTTCTGTCTACCACTAAAATATTGAAAAGGAAACGGAAGTCTTCAATACCAAAGATATCAAATGCTGATGCTCATATGGATTCTGATATGAATGAACCTTCAAAGACTGAGGGCTGTGGTGAAGAAGAAAATAAACCAGTGACTAAAGGAAAACGCACCAATCAAATCTCTACGCCTTCAAAACAATGGAAATCAGCCAGATCATTGGAAGGATCTTTGAATAGCGATCAGAGGCGTACAGTGACTGATTTAACGGGATCGACCGCACAAGCTCCCACTTCAAGCCAAGTTAATTTGCCAACGAAACAAACAAGTAGACGTAAAATGTATATACCCAGAACGTTGCACCCCAAAGAGAAGTCTTGCGAGAAAAAATTGAAAAATCAGCTTATCACACGCTCAAACTCAGTGCAGGACAGAGCACTCCATCTAAAGGAAAAGATATCTTGTTGCTTGTCATCACATTTAGTACGTAGATGGTGCACTTTTGAGTGGTTTTATAGCGCACTTGACTACCCTTGGTTTGCCAAAAGGGAGTTTGAGGAGTACTTAAATCATGTTGGACTGGGACACATTCCGAGACTAACTCGTGTTGAATGGGGTGTCATTAGAAGTTCCCTTGGCAAACCTCGAAGGTTTTCTGAGCACTTTCTACATGAAGAAAGGGAGAAACTTAAACAATATCGGGAATCTGTGAGGAAACATTATGCTGAGCTTCGTACTGGTGTTAGGGAAGGACTCCCAACAGATTTAGCAAGACCTTTATCAGTTGGGCAACGAGTAATTGCTCTACATCCTAAAACAAGAGAAGTTCATGATGGAAGTGTGCTCACCGTTGATCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04218 map04218

Pfam Domains

Protein Families

DIRP Myb_DNA-binding

Protein Analysis

749

Amino Acids

83.36

Weight (kDa)

9.57

Isoelectric Point (pI)

50.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002363)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05380 AT3G05380 AT3G05380 AT3G05380 AT3G05380 AT5G27610
fragaria_vesca	FvH4_6g06170 FvH4_6g06170 FvH4_6g06170 FvH4_6g06170 FvH4_6g06170 FvH4_6g06170 FvH4_6g06170 FvH4_6g06170 FvH4_6g06170 FvH4_6g06170 FvH4_6g06170 FvH4_6g06170 FvH4_6g06170
malus_domestica	MD04G1203700.v1.1 MD12G1217500.v1.1
prunus_persica	Prupe.6G323800_v2.0.a1 Prupe.6G323800_v2.0.a1 Prupe.6G323800_v2.0.a1 Prupe.6G323800_v2.0.a1 Prupe.6G323800_v2.0.a1 Prupe.6G323800_v2.0.a1
pyrus_communis	pycom04g18020 pycom12g20300
rosa_chinensis	RchiOBHm_Chr3g0455181
rosa_laevigata	RLG00000025380
rosa_multiflora	Rmu_sc0002169.1_g000028
rosa_roxburghii	Rroxscaffold_6G00424500
rosa_rugosa	Rorug03G0004300 Rorug03G0004400 Rorug03G0004500 Rorug03G0004500
rosa_samantha	Rh3AG065100 Rh3BG067200 Rh3CG065600 Rh3DG067200
rosa_wichuraiana	Rw3G005110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	185, 621
AccI	GTMKAC	3 cut(s)	879, 1409, 1717
AccIII	TCCGGA	1 cut(s)	61
AciI	CCGC	7 cut(s)	34, 75, 163, 365, 536, 960, 1665
AclI	AACGTT	1 cut(s)	1742
AclWI	GGATC	5 cut(s)	1180, 1352, 1365, 1621, 1666
AcsI	RAATTY	1 cut(s)	1223
AcuI	CTGAAG	4 cut(s)	104, 768, 1002, 1257
AfaI	GTAC	5 cut(s)	874, 1639, 1872, 1949, 2122
AfiI	CCNNNNNNNGG	4 cut(s)	752, 893, 1350, 1834
AjnI	CCWGG	1 cut(s)	751
Alw21I	GWGCWC	5 cut(s)	731, 1825, 1886, 2049, 2232
Alw26I	GTCTC	5 cut(s)	406, 834, 1146, 1387, 1975
Alw44I	GTGCAC	1 cut(s)	1882
AlwI	GGATC	5 cut(s)	1180, 1352, 1365, 1621, 1666
AlwNI	CAGNNNCTG	3 cut(s)	263, 1405, 1646
Ama87I	CYCGRG	1 cut(s)	516
Aor13HI	TCCGGA	1 cut(s)	61
AoxI	GGCC	2 cut(s)	3, 271
ApaLI	GTGCAC	1 cut(s)	1882
ApeKI	GCWGC	3 cut(s)	173, 176, 629
ApoI	RAATTY	1 cut(s)	1223
ArsI	GACNNNNNNTTYG	2 cut(s)	631, 663
Asp700I	GAANNNNTTC	2 cut(s)	259, 2038
AspLEI	GCGC	4 cut(s)	186, 622, 830, 1907
AspS9I	GGNCC	1 cut(s)	4
AsuHPI	GGTGA	3 cut(s)	494, 1532, 2224
AsuII	TTCGAA	1 cut(s)	890
AvaI	CYCGRG	1 cut(s)	516
BaeGI	GKGCMC	1 cut(s)	1886
BamHI	GGATCC	1 cut(s)	1357
BanII	GRGCYC	1 cut(s)	731
BauI	CACGAG	3 cut(s)	492, 762, 1989
BbsI	GAAGAC	3 cut(s)	700, 801, 1434
Bbv12I	GWGCWC	5 cut(s)	731, 1825, 1886, 2049, 2232
BbvI	GCAGC	3 cut(s)	160, 163, 641
BccI	CCATC	6 cut(s)	196, 473, 950, 1836, 1872, 2213
BciT130I	CCWGG	1 cut(s)	753
BciVI	GTATCC	1 cut(s)	543
BcoDI	GTCTC	5 cut(s)	406, 834, 1146, 1387, 1975
BfaI	CTAG	1 cut(s)	1002
BfmI	CTRYAG	2 cut(s)	177, 264
BfoI	RGCGCY	1 cut(s)	831
BfuI	GTATCC	1 cut(s)	543
BisI	GCNGC	4 cut(s)	174, 177, 365, 630
BlpI	GCTNAGC	1 cut(s)	2112
BlsI	GCNGC	4 cut(s)	175, 178, 366, 631
BmcAI	AGTACT	1 cut(s)	1949
Bme1390I	CCNGG	1 cut(s)	753
BmeT110I	CYCGRG	1 cut(s)	516
BmgT120I	GGNCC	1 cut(s)	4
BmiI	GGNNCC	3 cut(s)	6, 1327, 1359
BmrFI	CCNGG	1 cut(s)	753
BmrI	ACTGGG	3 cut(s)	390, 1275, 1976
BmuI	ACTGGG	3 cut(s)	390, 1275, 1976
BpiI	GAAGAC	3 cut(s)	700, 801, 1434
BplI	GAGNNNNNCTC	4 cut(s)	499, 531, 1972, 2004
BpmI	CTGGAG	2 cut(s)	858, 1335
Bpu10I	CCTNAGC	2 cut(s)	730, 1129
Bpu1102I	GCTNAGC	1 cut(s)	2112
Bpu14I	TTCGAA	1 cut(s)	890
Bsa29I	ATCGAT	1 cut(s)	2242
BsaAI	YACGTR	1 cut(s)	1874
BsaBI	GATNNNNATC	1 cut(s)	451
BsaJI	CCNNGG	3 cut(s)	752, 1919, 2020
BsaWI	WCCGGW	1 cut(s)	61
Bsc4I	CCNNNNNNNGG	4 cut(s)	752, 893, 1350, 1834
Bse1I	ACTGG	8 cut(s)	396, 803, 841, 1183, 1281, 1538, 1971, 2128
Bse3DI	GCAATG	3 cut(s)	115, 242, 343
Bse8I	GATNNNNATC	1 cut(s)	451
BseAI	TCCGGA	1 cut(s)	61
BseBI	CCWGG	1 cut(s)	753
BseCI	ATCGAT	1 cut(s)	2242
BseDI	CCNNGG	3 cut(s)	752, 1919, 2020
BseGI	GGATG	6 cut(s)	424, 452, 742, 796, 1120, 2194
BseJI	GATNNNNATC	1 cut(s)	451
BseLI	CCNNNNNNNGG	4 cut(s)	752, 893, 1350, 1834
BseMI	GCAATG	3 cut(s)	115, 242, 343
BseMII	CTCAG	6 cut(s)	633, 744, 1500, 1821, 2034, 2103
BseNI	ACTGG	8 cut(s)	396, 803, 841, 1183, 1281, 1538, 1971, 2128
BseRI	GAGGAG	2 cut(s)	672, 1958
BseSI	GKGCMC	1 cut(s)	1886
BseXI	GCAGC	3 cut(s)	160, 163, 641
BsgI	GTGCAG	2 cut(s)	516, 1832
Bsh1285I	CGRYCG	1 cut(s)	1665
BshFI	GGCC	2 cut(s)	5, 273
BshVI	ATCGAT	1 cut(s)	2242
BsiEI	CGRYCG	1 cut(s)	1665
BsiHKAI	GWGCWC	5 cut(s)	731, 1825, 1886, 2049, 2232
BsiHKCI	CYCGRG	1 cut(s)	516
BsiSI	CCGG	3 cut(s)	62, 849, 1154
BslFI	GGGAC	4 cut(s)	506, 614, 1217, 1983
BslI	CCNNNNNNNGG	4 cut(s)	752, 893, 1350, 1834
BsmAI	GTCTC	5 cut(s)	406, 834, 1146, 1387, 1975
BsmBI	CGTCTC	1 cut(s)	834
BsmFI	GGGAC	4 cut(s)	506, 614, 1217, 1983
BsmI	GAATGC	1 cut(s)	744
BsnI	GGCC	2 cut(s)	5, 273
BsoBI	CYCGRG	1 cut(s)	516
Bsp119I	TTCGAA	1 cut(s)	890
Bsp1286I	GDGCHC	5 cut(s)	731, 1825, 1886, 2049, 2232
Bsp13I	TCCGGA	1 cut(s)	61
Bsp143I	GATC	9 cut(s)	292, 388, 1172, 1357, 1601, 1613, 1627, 1658, 2239
Bsp1720I	GCTNAGC	1 cut(s)	2112
BspACI	CCGC	7 cut(s)	34, 75, 163, 365, 536, 960, 1665
BspANI	GGCC	2 cut(s)	5, 273
BspCNI	CTCAG	6 cut(s)	634, 743, 1501, 1820, 2035, 2104
BspDI	ATCGAT	1 cut(s)	2242
BspEI	TCCGGA	1 cut(s)	61
BspHI	TCATGA	1 cut(s)	2215
BspLI	GGNNCC	3 cut(s)	6, 1327, 1359
BspMAI	CTGCAG	1 cut(s)	181
BspPI	GGATC	5 cut(s)	1180, 1352, 1365, 1621, 1666
BspT104I	TTCGAA	1 cut(s)	890
BsrDI	GCAATG	3 cut(s)	115, 242, 343
BsrI	ACTGG	8 cut(s)	396, 803, 841, 1183, 1281, 1538, 1971, 2128
BssECI	CCNNGG	3 cut(s)	752, 1919, 2020
BssMI	GATC	9 cut(s)	292, 388, 1172, 1357, 1601, 1613, 1627, 1658, 2239
BssSI	CACGAG	3 cut(s)	492, 762, 1989
BssT1I	CCWWGG	2 cut(s)	1919, 2020
Bst2BI	CACGAG	3 cut(s)	492, 762, 1989
Bst2UI	CCWGG	1 cut(s)	753
Bst4CI	ACNGT	7 cut(s)	46, 102, 877, 935, 1381, 1642, 2236
BstBAI	YACGTR	1 cut(s)	1874
BstBI	TTCGAA	1 cut(s)	890
BstC8I	GCNNGC	2 cut(s)	377, 970
BstDEI	CTNAG	7 cut(s)	642, 730, 1129, 1509, 1807, 2043, 2112
BstEII	GGTNACC	1 cut(s)	482
BstF5I	GGATG	6 cut(s)	424, 452, 742, 796, 1120, 2194
BstH2I	RGCGCY	1 cut(s)	831
BstHHI	GCGC	4 cut(s)	186, 622, 830, 1907
BstKTI	GATC	9 cut(s)	295, 391, 1175, 1360, 1604, 1616, 1630, 1661, 2242
BstMAI	GTCTC	5 cut(s)	406, 834, 1146, 1387, 1975
BstMBI	GATC	9 cut(s)	292, 388, 1172, 1357, 1601, 1613, 1627, 1658, 2239
BstMCI	CGRYCG	1 cut(s)	1665
BstMWI	GCNNNNNNNGC	2 cut(s)	192, 626
BstNI	CCWGG	1 cut(s)	753
BstNSI	RCATGY	3 cut(s)	626, 886, 972
BstPI	GGTNACC	1 cut(s)	482
BstSCI	CCNGG	1 cut(s)	751
BstSFI	CTRYAG	2 cut(s)	177, 264
BstSLI	GKGCMC	1 cut(s)	1886
BstSNI	TACGTA	1 cut(s)	1874
BstV1I	GCAGC	3 cut(s)	160, 163, 641
BstV2I	GAAGAC	3 cut(s)	700, 801, 1434
BstX2I	RGATCY	2 cut(s)	1357, 1613
BstXI	CCANNNNNNTGG	1 cut(s)	1606
BstYI	RGATCY	2 cut(s)	1357, 1613
Bsu15I	ATCGAT	1 cut(s)	2242
BsuI	GTATCC	1 cut(s)	543
BsuRI	GGCC	2 cut(s)	5, 273
BsuTUI	ATCGAT	1 cut(s)	2242
BtgZI	GCGATG	2 cut(s)	296, 420
BtsCI	GGATG	6 cut(s)	424, 452, 742, 796, 1120, 2194
BtsI	GCAGTG	3 cut(s)	186, 322, 979
Cac8I	GCNNGC	2 cut(s)	377, 970
CaiI	CAGNNNCTG	3 cut(s)	263, 1405, 1646
CciI	TCATGA	1 cut(s)	2215
CfoI	GCGC	4 cut(s)	186, 622, 830, 1907
Cfr13I	GGNCC	1 cut(s)	4
ClaI	ATCGAT	1 cut(s)	2242
Csp6I	GTAC	5 cut(s)	873, 1638, 1871, 1948, 2121
CviAII	CATG	7 cut(s)	623, 883, 969, 1107, 1958, 2057, 2216
CviQI	GTAC	5 cut(s)	873, 1638, 1871, 1948, 2121
DdeI	CTNAG	7 cut(s)	642, 730, 1129, 1509, 1807, 2043, 2112
DpnI	GATC	9 cut(s)	294, 390, 1174, 1359, 1603, 1615, 1629, 1660, 2241
DpnII	GATC	9 cut(s)	292, 388, 1172, 1357, 1601, 1613, 1627, 1658, 2239
EciI	GGCGGA	2 cut(s)	90, 178
Ecl136II	GAGCTC	1 cut(s)	729
Eco105I	TACGTA	1 cut(s)	1874
Eco130I	CCWWGG	2 cut(s)	1919, 2020
Eco24I	GRGCYC	1 cut(s)	731
Eco32I	GATATC	2 cut(s)	1458, 1845
Eco53kI	GAGCTC	1 cut(s)	729
Eco57I	CTGAAG	4 cut(s)	104, 768, 1002, 1257
Eco88I	CYCGRG	1 cut(s)	516
Eco91I	GGTNACC	1 cut(s)	482
EcoICRI	GAGCTC	1 cut(s)	729
EcoO65I	GGTNACC	1 cut(s)	482
EcoRII	CCWGG	1 cut(s)	751
EcoRV	GATATC	2 cut(s)	1458, 1845
EcoT14I	CCWWGG	2 cut(s)	1919, 2020
EcoT22I	ATGCAT	2 cut(s)	139, 744
EcoT38I	GRGCYC	1 cut(s)	731
ErhI	CCWWGG	2 cut(s)	1919, 2020
Esp3I	CGTCTC	1 cut(s)	834
FaeI	CATG	7 cut(s)	626, 886, 972, 1110, 1961, 2060, 2219
FaqI	GGGAC	4 cut(s)	506, 614, 1217, 1983
FatI	CATG	7 cut(s)	622, 882, 968, 1106, 1957, 2056, 2215
FauI	CCCGC	1 cut(s)	953
FauNDI	CATATG	1 cut(s)	1476
FblI	GTMKAC	3 cut(s)	879, 1409, 1717
Fnu4HI	GCNGC	4 cut(s)	174, 177, 365, 630
FokI	GGATG	6 cut(s)	411, 459, 729, 803, 1127, 2181
FriOI	GRGCYC	1 cut(s)	731
Fsp4HI	GCNGC	4 cut(s)	174, 177, 365, 630
FspBI	CTAG	1 cut(s)	1002
FspI	TGCGCA	2 cut(s)	185, 621
GlaI	GCGC	4 cut(s)	185, 621, 829, 1906
GluI	GCNGC	4 cut(s)	174, 177, 365, 630
GsuI	CTGGAG	2 cut(s)	858, 1335
HaeII	RGCGCY	1 cut(s)	831
HaeIII	GGCC	2 cut(s)	5, 273
HapII	CCGG	3 cut(s)	62, 849, 1154
HhaI	GCGC	4 cut(s)	186, 622, 830, 1907
Hin1II	CATG	7 cut(s)	626, 886, 972, 1110, 1961, 2060, 2219
Hin6I	GCGC	4 cut(s)	184, 620, 828, 1905
HinP1I	GCGC	4 cut(s)	184, 620, 828, 1905
HindIII	AAGCTT	3 cut(s)	377, 473, 558
HinfI	GANTC	8 cut(s)	519, 940, 1157, 1166, 1388, 1481, 2090, 2139
HpaII	CCGG	3 cut(s)	62, 849, 1154
HphI	GGTGA	3 cut(s)	494, 1532, 2224
Hpy166II	GTNNAC	4 cut(s)	880, 1410, 1718, 1884
Hpy188III	TCNNGA	9 cut(s)	62, 357, 403, 724, 732, 1170, 1314, 2087, 2216
Hpy8I	GTNNAC	4 cut(s)	880, 1410, 1718, 1884
Hpy99I	CGWCG	1 cut(s)	780
HpyCH4III	ACNGT	7 cut(s)	46, 102, 877, 935, 1381, 1642, 2236
HpyCH4IV	ACGT	3 cut(s)	1720, 1742, 1873
HpyF10VI	GCNNNNNNNGC	2 cut(s)	192, 626
HpyF3I	CTNAG	7 cut(s)	642, 730, 1129, 1509, 1807, 2043, 2112
HpySE526I	ACGT	3 cut(s)	1720, 1742, 1873
Hsp92II	CATG	7 cut(s)	626, 886, 972, 1110, 1961, 2060, 2219
HspAI	GCGC	4 cut(s)	184, 620, 828, 1905
Kpn2I	TCCGGA	1 cut(s)	61
Kzo9I	GATC	9 cut(s)	292, 388, 1172, 1357, 1601, 1613, 1627, 1658, 2239
LmnI	GCTCC	2 cut(s)	105, 1678
Lsp1109I	GCAGC	3 cut(s)	160, 163, 641
MaeI	CTAG	1 cut(s)	1002
MaeII	ACGT	3 cut(s)	1720, 1742, 1873
MaeIII	GTNAC	3 cut(s)	482, 1540, 1642
MalI	GATC	9 cut(s)	294, 390, 1174, 1359, 1603, 1615, 1629, 1660, 2241
MboI	GATC	9 cut(s)	292, 388, 1172, 1357, 1601, 1613, 1627, 1658, 2239
MflI	RGATCY	2 cut(s)	1357, 1613
MhlI	GDGCHC	5 cut(s)	731, 1825, 1886, 2049, 2232
MluCI	AATT	9 cut(s)	525, 573, 1223, 1256, 1308, 1330, 1693, 1775, 2184
MlyI	GAGTC	2 cut(s)	528, 2133
MmeI	TCCRAC	4 cut(s)	481, 566, 783, 1942
Mph1103I	ATGCAT	2 cut(s)	139, 744
MroI	TCCGGA	1 cut(s)	61
MroXI	GAANNNNTTC	2 cut(s)	259, 2038
MseI	TTAA	8 cut(s)	276, 576, 927, 990, 1652, 1692, 1952, 2076
MslI	CAYNNNNRTG	3 cut(s)	200, 300, 429
MspI	CCGG	3 cut(s)	62, 849, 1154
MspR9I	CCNGG	1 cut(s)	753
Mva1269I	GAATGC	1 cut(s)	744
MvaI	CCWGG	1 cut(s)	753
MwoI	GCNNNNNNNGC	2 cut(s)	192, 626
NdeI	CATATG	1 cut(s)	1476
NdeII	GATC	9 cut(s)	292, 388, 1172, 1357, 1601, 1613, 1627, 1658, 2239
NlaIII	CATG	7 cut(s)	626, 886, 972, 1110, 1961, 2060, 2219
NlaIV	GGNNCC	3 cut(s)	6, 1327, 1359
NmuCI	GTSAC	3 cut(s)	482, 1540, 1642
NsbI	TGCGCA	2 cut(s)	185, 621
NsiI	ATGCAT	2 cut(s)	139, 744
NspI	RCATGY	3 cut(s)	626, 886, 972
NspV	TTCGAA	1 cut(s)	890
PaeI	GCATGC	1 cut(s)	972
PaeR7I	CTCGAG	1 cut(s)	516
PagI	TCATGA	1 cut(s)	2215
PctI	GAATGC	1 cut(s)	744
PdmI	GAANNNNTTC	2 cut(s)	259, 2038
PfeI	GAWTC	6 cut(s)	940, 1157, 1166, 1388, 1481, 2090
PkrI	GCNGC	4 cut(s)	175, 178, 366, 631
PleI	GAGTC	2 cut(s)	527, 2133
PpsI	GAGTC	2 cut(s)	527, 2133
Ppu21I	YACGTR	1 cut(s)	1874
Psp124BI	GAGCTC	1 cut(s)	731
Psp1406I	AACGTT	1 cut(s)	1742
Psp6I	CCWGG	1 cut(s)	751
PspEI	GGTNACC	1 cut(s)	482
PspGI	CCWGG	1 cut(s)	751
PspN4I	GGNNCC	3 cut(s)	6, 1327, 1359
PspPI	GGNCC	1 cut(s)	4
PspXI	VCTCGAGB	1 cut(s)	516
PstI	CTGCAG	1 cut(s)	181
PstNI	CAGNNNCTG	3 cut(s)	263, 1405, 1646
PsuI	RGATCY	2 cut(s)	1357, 1613
RsaI	GTAC	5 cut(s)	874, 1639, 1872, 1949, 2122
RsaNI	GTAC	5 cut(s)	873, 1638, 1871, 1948, 2121
RseI	CAYNNNNRTG	3 cut(s)	200, 300, 429
SacI	GAGCTC	1 cut(s)	731
SaqAI	TTAA	8 cut(s)	276, 576, 927, 990, 1652, 1692, 1952, 2076
SatI	GCNGC	4 cut(s)	174, 177, 365, 630
Sau3AI	GATC	9 cut(s)	292, 388, 1172, 1357, 1601, 1613, 1627, 1658, 2239
Sau96I	GGNCC	1 cut(s)	4
ScaI	AGTACT	1 cut(s)	1949
SchI	GAGTC	2 cut(s)	528, 2133
ScrFI	CCNGG	1 cut(s)	753
SduI	GDGCHC	5 cut(s)	731, 1825, 1886, 2049, 2232
SfcI	CTRYAG	2 cut(s)	177, 264
Sfr274I	CTCGAG	1 cut(s)	516
SfuI	TTCGAA	1 cut(s)	890
SlaI	CTCGAG	1 cut(s)	516
SmiMI	CAYNNNNRTG	3 cut(s)	200, 300, 429
SmlI	CTYRAG	1 cut(s)	516
SmoI	CTYRAG	1 cut(s)	516
SnaBI	TACGTA	1 cut(s)	1874
SphI	GCATGC	1 cut(s)	972
Sse9I	AATT	9 cut(s)	525, 573, 1223, 1256, 1308, 1330, 1693, 1775, 2184
SsiI	CCGC	7 cut(s)	34, 75, 163, 365, 536, 960, 1665
SspI	AATATT	1 cut(s)	1422
SspMI	CTAG	1 cut(s)	1002
SstI	GAGCTC	1 cut(s)	731
StyD4I	CCNGG	1 cut(s)	751
StyI	CCWWGG	2 cut(s)	1919, 2020
TaaI	ACNGT	7 cut(s)	46, 102, 877, 935, 1381, 1642, 2236
TaiI	ACGT	3 cut(s)	1723, 1745, 1876
TaqI	TCGA	7 cut(s)	358, 404, 517, 890, 1661, 2032, 2242
TasI	AATT	9 cut(s)	525, 573, 1223, 1256, 1308, 1330, 1693, 1775, 2184
TatI	WGTACW	1 cut(s)	1947
TauI	GCSGC	1 cut(s)	367
TfiI	GAWTC	6 cut(s)	940, 1157, 1166, 1388, 1481, 2090
Tru1I	TTAA	8 cut(s)	276, 576, 927, 990, 1652, 1692, 1952, 2076
Tru9I	TTAA	8 cut(s)	276, 576, 927, 990, 1652, 1692, 1952, 2076
TseFI	GTSAC	3 cut(s)	482, 1540, 1642
TseI	GCWGC	3 cut(s)	173, 176, 629
Tsp45I	GTSAC	3 cut(s)	482, 1540, 1642
TspGWI	ACGGA	2 cut(s)	705, 1450
VneI	GTGCAC	1 cut(s)	1882
XapI	RAATTY	1 cut(s)	1223
XceI	RCATGY	3 cut(s)	626, 886, 972
XhoI	CTCGAG	1 cut(s)	516
XmiI	GTMKAC	3 cut(s)	879, 1409, 1717
XmnI	GAANNNNTTC	2 cut(s)	259, 2038
XspI	CTAG	1 cut(s)	1002
ZrmI	AGTACT	1 cut(s)	1949
Zsp2I	ATGCAT	2 cut(s)	139, 744

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.