Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008488

Physical Location & Seq

Genomic Coordinates Forward (+)

1940907 .. 1946980

Gene Structure 6074 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G06400.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3168 bp

ATGGCGAGAAATTCGAATTCCGATGAGGCTTTCTCGTCAGAGGAGGAAGAAGAGCGGGTTAAGGATAATGAAGAAGAAGATGAGGAGGAGCTCGAGGCTGTTGCTCGTTCTTCTGGCTCCGACGATGACGAAGTAGCCGCCGCCGACGAATCACCAGTCTCCGACGGAGAGGCTGCTCCCGTAGAAGATGATTACGAGGACGAAGAAGATGAGGAAAAAGCTGAAATCAGCAAACGTGAGAAAGCCAGACTTAAAGAGATGCAGAAGTTGAAGAAGCAGAAGATTCAAGAGATGCTGGAGTCGCAGAATGCTTCCATTGACGCGGATATGAACAATAAGGGAAAAGGGAGACTGAAGTATCTTCTGCAGCAAACTGAGTTATTTGCCCACTTTGCTAAAAGTGATGGATCTTCTTCTCAGAAGAAGGCAAAAGGAAGGGGACGTCATGCTTCCAAAATAACTGAAGAGGAGGAAGACGAAGAGTATCTAAAGGAAGAAGAGGATGGCTTAACTGGATCTGGAAACACACGGTTACTCACACAGCCCTCTTGTATTCAAGGGAAGATGAGAGATTACCAATTAGCTGGTTTGAACTGGCTCATTCGTCTTTATGAGAATGGCATAAATGGAATTCTTGCTGATGAAATGGGTCTGGGGAAGACGCTTCAAACGATTTCTTTGTTGGCATATCTTCATGAATACAGGGGAATCAATGGTCCCCATATGGTGGTTGCTCCAAAATCAACACTTGGTAATTGGATGAACGAAATTCGCCGGTTTTGTCCTGTCCTACGTGCTGTGAAGTTCCTTGGTAATCCTGAGGAGAGGAGACATATTCGAGAAGACCTGCTAGTTGCTGGGAAATTTGATATTTGTGTCACAAGCTTTGAGATGGCCATCAAAGAGAAGACAGCACTTCGTCGGTTTAGCTGGCGTTATATTATCATTGATGAAGCGCATCGAATCAAGAACGAGAATTCACTCCTTTCTAAAACCATGAGACTTTTTAGCACCAATTATCGGCTTCTTATCACGGGGACCCCCCTTCAGAATAATCTCCATGAACTGTGGGCTCTTCTAAATTTTCTTCTGCCTGAGATTTTTAGTTCAGCAGAGACTTTTGATGAATGGTTTCAAATTTCTGGTGAGAATGACCAGCAAGAAGTTGTGCAACAACTGCACAAGGTTCTTCGACCATTTCTTCTTCGAAGACTAAAGTCAGATGTTGAGAAAGGTTTGCCACCGAAGAAGGAGACCATACTTAAAGTTGGTATGTCTCAGATGCAAAAGCAATACTACAAGGCTTTACTGCAGAAGGATCTTGAAGCGGTTAATGCTGGTGGAGAACGCAAACGTCTGCTAAACATTGCAATGCAACTGCGTAAATGCTGCAATCACCCCTATCTCTTCCAGGGTGCAGAACCTGGTCCCCCATATACCACAGGAGATCACCTTATAACAAATGCTGGTAAGATGGTTCTCTTGGATAAATTGCTTCCTAAGTTGAAAGAACGTGATTCAAGGGTGCTGATATTTTCTCAGATGACAAGACTTTTGGATATTCTTGAGGACTATTTAATGTATCGTGGTTACTTGTATTGCCGTATTGATGGAAACACTGGTGGTGACGAACGAGATGCCTCCATAGAAGCCTACAACAAGCCAGGAAGTGAGAAATTTGTTTTCTTGTTATCTACTAGAGCTGGAGGGCTTGGTATCAATCTTGCTACTGCAGATGTTGTGATCCTTTACGATAGTGATTGGAACCCACAAGTCGACTTGCAAGCTCAGGATCGTGCCCATAGGATTGGTCAAAAAAAAGAAGTTCAAGTGTTTCGATTCTGCACTGAGTCTGCTATTGAGGAGAAAGTGATTGAAAGAGCTTACAAGAAGTTAGCACTTGATGCTCTGGTTATTCAACAAGGGAGATTGGCAGAACAGAAAACTGTCAATAAGGATGAGTTGCTTCAAATGGTAAGATATGGTGCTGAGATGGTGTTCAGTTCTAAAGATAGCACAATCACAGACGAGGATATTGATAGAATCATTGCCAAAGGAGAAGAGGCAACAGCTGAACTTGATGCTAAGATGAAGAAATTCACAGAAGATGCTATACAGTTTAAAATGGATGACAGTGCTGACTTCTATGATTTTGATGATGACAATAAGGATGAAAACAAGCTCGATTTTAAAAAGATTGTAAGCGACAATTGGAATGATCCCCCCAAGCGGGAGAGAAAGCGCAACTACTCTGAATCTGAGTACTTTAAGCAAACATTGCGGCAAGGTGCTCCAGCTAAACCTAAAGAGCCTAGAATTCCGCGCATGCCCCAGTTGCACGATTTCCAGTTCTTTAACATTCAGAGATTGACCGAGTTGTATGAAAAGGAAGTACGTTATCTCATGCAAACACATCAGAAAAATCAGTTGAAAGACACAATTGATGTTGAAGAACCAGAAGGTGGGGATCCCTTAACTACTGAAGAAGTAGAAGAAAAGGAGGGATTATTGGAGGAGGGTTTCTCAACATGGAGCAGAAGAGATTTTAATACTTTCCTCAGGGCTTGTGAGAAGTATGGCCGCAACGACATAAAAAGCATTGCCTCTGAGATGGAAGGGAAAACAGAGGAAGAAGTTGAAAGATATGCCAAAGTATTTAAAGAGCGGTACAAGGAGCTGAACGACTATGATAGAATCATTAAGAACATTGAGAGGGGAGAGGCAAGGATCTCTAGGAAAGACGAAATCATGAAGGCCATAGGGAAGAAACTGGATCGCTACAGAAACCCTTGGCTGGAACTGAAGATTCAATATGGTCAGAACAAAGGCAAGCTGTACAATGAAGAGTGTGACCGTTTCATGATCTGCATGATTCACAAACTTGGTTATGGGAATTGGGATGAGCTAAAGGCAGCATTTAGGACATCGTCTGTGTTCAGGTTTGACTGGTTTGTGAAATCCCGCACGAGTCAGGAACTTGCAAGAAGATGCGACACTCTGATTCGACTGATCGAGAAAGAGAACCAGGAGTTTGATGAAAGAGAGAGGCAAGCCCGCAAAGAGAAGAAGCTCGCGAAGAGTGCAACACCATCAAAGCGACCTTTAGGAAGACAAGCAAGTGAGAGTCCTTCATCGACGAAGAAGCGGAAGCACCTGTCGATGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006323 GO:0006325 GO:0006333 GO:0006996 GO:0007275 GO:0008150 GO:0009553 GO:0009561 GO:0009987 GO:0016043 GO:0016584 GO:0022607 GO:0031497 GO:0032501 GO:0032502 GO:0034728 GO:0040034 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044464 GO:0048229 GO:0048506 GO:0048509 GO:0048510 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051276 GO:0065007 GO:0071103 GO:0071824 GO:0071840 GO:0080134 GO:0080135 GO:1900034 GO:1900036

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DBINO HAND Helicase_C SLIDE SNF2_N

Protein Analysis

1055

Amino Acids

122.43

Weight (kDa)

5.69

Isoelectric Point (pI)

46.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ResIII	PF04851	188 - 348	1.1e-10	Type III restriction enzyme, res subunit
SNF2-rel_dom	PF00176	192 - 469	1.5e-101	SNF2-related domain
Helicase_C	PF00271	491 - 604	5.2e-24	Helicase conserved C-terminal domain
HAND	PF09110	754 - 832	7.8e-07	HAND
SLIDE	PF09111	898 - 1008	6.2e-42	SLIDE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008488)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06400 AT3G06400 AT3G06400 AT5G18620 AT5G18620
fragaria_vesca	FvH4_4g17400 FvH4_4g17400
malus_domestica	MD13G1172500.v1.1 MD16G1173900.v1.1
prunus_persica	Prupe.1G140700_v2.0.a1 Prupe.1G140700_v2.0.a1 Prupe.1G140700_v2.0.a1
pyrus_communis	pycom13g14810
rosa_chinensis	RchiOBHm_Chr4g0421321
rosa_laevigata	RLG00000007697
rosa_multiflora	Rmu_sc0015713.1_g000006
rosa_roxburghii	Rroxscaffold_5G00363560
rosa_rugosa	Rorug04G0168900
rosa_samantha	Rh4AG230900 Rh4BG233900 Rh4CG245300 Rh4DG229500
rosa_wichuraiana	Rw4G020300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1457
AatII	GACGTC	1 cut(s)	445
Acc36I	ACCTGC	1 cut(s)	855
AccB7I	CCANNNNNTGG	2 cut(s)	727, 2462
AccBSI	CCGCTC	2 cut(s)	55, 2665
AccI	GTMKAC	1 cut(s)	1776
AccII	CGCG	3 cut(s)	323, 2323, 3074
AcoI	YGGCCR	2 cut(s)	894, 2578
AcuI	CTGAAG	5 cut(s)	374, 483, 1031, 2502, 2822
AcyI	GRCGYC	1 cut(s)	442
AfaI	GTAC	4 cut(s)	2264, 2394, 2669, 2837
AfiI	CCNNNNNNNGG	6 cut(s)	727, 1020, 2229, 2230, 2462, 2794
AjnI	CCWGG	4 cut(s)	1410, 1423, 1663, 3024
Alw21I	GWGCWC	2 cut(s)	93, 2293
Alw26I	GTCTC	7 cut(s)	163, 343, 823, 994, 1109, 1247, 1281
AlwNI	CAGNNNCTG	1 cut(s)	1424
Ama87I	CYCGRG	1 cut(s)	92
AoxI	GGCC	3 cut(s)	894, 2578, 2754
ApeKI	GCWGC	4 cut(s)	173, 367, 1389, 2912
ArsI	GACNNNNNNTTYG	4 cut(s)	141, 173, 1537, 1569
Asp700I	GAANNNNTTC	2 cut(s)	1131, 2096
AspLEI	GCGC	3 cut(s)	958, 2244, 2325
AspS9I	GGNCC	3 cut(s)	716, 1038, 1427
AsuHPI	GGTGA	5 cut(s)	144, 1157, 1388, 1442, 1637
AsuII	TTCGAA	2 cut(s)	14, 1207
AvaI	CYCGRG	1 cut(s)	92
AvaII	GGWCC	3 cut(s)	716, 1038, 1427
AxyI	CCTNAGG	2 cut(s)	819, 2558
BaeGI	GKGCMC	1 cut(s)	1801
BaeI	ACNNNNGTAYC	2 cut(s)	341, 374
BalI	TGGCCA	1 cut(s)	896
BamHI	GGATCC	1 cut(s)	2467
BanII	GRGCYC	2 cut(s)	93, 1075
BarI	GAAGNNNNNNTAC	2 cut(s)	2097, 2129
BauI	CACGAG	1 cut(s)	2965
BbsI	GAAGAC	6 cut(s)	480, 665, 849, 914, 1216, 3115
Bbv12I	GWGCWC	2 cut(s)	93, 2293
BbvI	GCAGC	4 cut(s)	160, 379, 1376, 2924
BccI	CCATC	9 cut(s)	398, 497, 886, 905, 1468, 1604, 1987, 2605, 3097
BceAI	ACGGC	1 cut(s)	1587
BcgI	CGANNNNNNTGC	4 cut(s)	83, 117, 1619, 1653
BciT130I	CCWGG	4 cut(s)	1412, 1425, 1665, 3026
BcoDI	GTCTC	7 cut(s)	163, 343, 823, 994, 1109, 1247, 1281
BfaI	CTAG	4 cut(s)	851, 1698, 2313, 2733
BfmI	CTRYAG	4 cut(s)	365, 1310, 1731, 2779
BfuAI	ACCTGC	1 cut(s)	855
BisI	GCNGC	8 cut(s)	138, 141, 174, 368, 1390, 2282, 2581, 2913
BlsI	GCNGC	8 cut(s)	139, 142, 175, 369, 1391, 2283, 2582, 2914
BmcAI	AGTACT	1 cut(s)	2264
Bme1390I	CCNGG	4 cut(s)	1412, 1425, 1665, 3026
Bme18I	GGWCC	3 cut(s)	716, 1038, 1427
BmeT110I	CYCGRG	1 cut(s)	92
BmgT120I	GGNCC	3 cut(s)	716, 1038, 1427
BmiI	GGNNCC	7 cut(s)	118, 718, 1039, 1040, 1429, 1766, 2469
BmrFI	CCNGG	4 cut(s)	1412, 1425, 1665, 3026
BmrI	ACTGGG	1 cut(s)	2326
BmsI	GCATC	9 cut(s)	249, 282, 967, 1272, 1627, 1894, 2071, 2098, 2978
BmuI	ACTGGG	1 cut(s)	2326
BoxI	GACNNNNGTC	1 cut(s)	1216
BpiI	GAAGAC	6 cut(s)	480, 665, 849, 914, 1216, 3115
BplI	GAGNNNNNCTC	4 cut(s)	17, 49, 2507, 2539
BpmI	CTGGAG	3 cut(s)	317, 1725, 2277
Bpu10I	CCTNAGC	1 cut(s)	1788
Bpu14I	TTCGAA	2 cut(s)	14, 1207
BpuEI	CTTGAG	1 cut(s)	1586
BsaAI	YACGTR	1 cut(s)	794
BsaBI	GATNNNNATC	1 cut(s)	896
BsaHI	GRCGYC	1 cut(s)	442
BsaI	GGTCTC	1 cut(s)	1247
BsaJI	CCNNGG	3 cut(s)	808, 1411, 2789
Bsc4I	CCNNNNNNNGG	6 cut(s)	727, 1020, 2229, 2230, 2462, 2794
Bse118I	RCCGGY	1 cut(s)	774
Bse1I	ACTGG	8 cut(s)	155, 517, 599, 1624, 2332, 2347, 2775, 2951
Bse21I	CCTNAGG	2 cut(s)	819, 2558
Bse3DI	GCAATG	5 cut(s)	1365, 1377, 2046, 2276, 2598
Bse8I	GATNNNNATC	1 cut(s)	896
BseBI	CCWGG	4 cut(s)	1412, 1425, 1665, 3026
BseDI	CCNNGG	3 cut(s)	808, 1411, 2789
BseGI	GGATG	6 cut(s)	508, 765, 1963, 2134, 2176, 2905
BseJI	GATNNNNATC	1 cut(s)	896
BseLI	CCNNNNNNNGG	6 cut(s)	727, 1020, 2229, 2230, 2462, 2794
BseMI	GCAATG	5 cut(s)	1365, 1377, 2046, 2276, 2598
BseNI	ACTGG	8 cut(s)	155, 517, 599, 1624, 2332, 2347, 2775, 2951
BseRI	GAGGAG	8 cut(s)	56, 98, 101, 482, 836, 841, 1877, 2528
BseSI	GKGCMC	1 cut(s)	1801
BseXI	GCAGC	4 cut(s)	160, 379, 1376, 2924
BseYI	CCCAGC	1 cut(s)	857
BsgI	GTGCAG	3 cut(s)	1163, 1437, 1828
Bsh1236I	CGCG	3 cut(s)	323, 2323, 3074
BshFI	GGCC	3 cut(s)	896, 2580, 2756
BsiHKAI	GWGCWC	2 cut(s)	93, 2293
BsiHKCI	CYCGRG	1 cut(s)	92
BsiSI	CCGG	1 cut(s)	775
BslFI	GGGAC	4 cut(s)	453, 702, 1051, 1413
BslI	CCNNNNNNNGG	6 cut(s)	727, 1020, 2229, 2230, 2462, 2794
BsmAI	GTCTC	7 cut(s)	163, 343, 823, 994, 1109, 1247, 1281
BsmFI	GGGAC	4 cut(s)	453, 702, 1051, 1413
BsmI	GAATGC	1 cut(s)	313
BsnI	GGCC	3 cut(s)	896, 2580, 2756
Bso31I	GGTCTC	1 cut(s)	1247
BsoBI	CYCGRG	1 cut(s)	92
Bsp119I	TTCGAA	2 cut(s)	14, 1207
Bsp1286I	GDGCHC	4 cut(s)	93, 1075, 1801, 2293
Bsp1407I	TGTACA	1 cut(s)	2835
Bsp68I	TCGCGA	1 cut(s)	3074
BspANI	GGCC	3 cut(s)	896, 2580, 2756
BspFNI	CGCG	3 cut(s)	323, 2323, 3074
BspHI	TCATGA	3 cut(s)	694, 2748, 2859
BspLI	GGNNCC	7 cut(s)	118, 718, 1039, 1040, 1429, 1766, 2469
BspMAI	CTGCAG	3 cut(s)	369, 1314, 1735
BspMI	ACCTGC	1 cut(s)	855
BspQI	GCTCTTC	2 cut(s)	45, 1080
BspT104I	TTCGAA	2 cut(s)	14, 1207
BspTNI	GGTCTC	1 cut(s)	1247
BsrBI	CCGCTC	2 cut(s)	55, 2665
BsrDI	GCAATG	5 cut(s)	1365, 1377, 2046, 2276, 2598
BsrFI	RCCGGY	1 cut(s)	774
BsrGI	TGTACA	1 cut(s)	2835
BsrI	ACTGG	8 cut(s)	155, 517, 599, 1624, 2332, 2347, 2775, 2951
BssAI	RCCGGY	1 cut(s)	774
BssECI	CCNNGG	3 cut(s)	808, 1411, 2789
BssNI	GRCGYC	1 cut(s)	442
BssSI	CACGAG	1 cut(s)	2965
BssT1I	CCWWGG	2 cut(s)	808, 2789
Bst2BI	CACGAG	1 cut(s)	2965
Bst2UI	CCWGG	4 cut(s)	1412, 1425, 1665, 3026
Bst4CI	ACNGT	6 cut(s)	531, 1068, 1948, 2118, 2135, 2855
BstACI	GRCGYC	1 cut(s)	442
BstAPI	GCANNNNNTGC	3 cut(s)	1177, 1904, 2278
BstAUI	TGTACA	1 cut(s)	2835
BstBAI	YACGTR	1 cut(s)	794
BstBI	TTCGAA	2 cut(s)	14, 1207
BstC8I	GCNNGC	7 cut(s)	932, 1785, 2327, 2831, 3051, 3055, 3072
BstF5I	GGATG	6 cut(s)	508, 765, 1963, 2134, 2176, 2905
BstFNI	CGCG	3 cut(s)	323, 2323, 3074
BstHHI	GCGC	3 cut(s)	958, 2244, 2325
BstMAI	GTCTC	7 cut(s)	163, 343, 823, 994, 1109, 1247, 1281
BstMWI	GCNNNNNNNGC	8 cut(s)	301, 392, 1177, 1334, 1904, 2278, 2335, 3080
BstNI	CCWGG	4 cut(s)	1412, 1425, 1665, 3026
BstNSI	RCATGY	1 cut(s)	2329
BstPAI	GACNNNNGTC	1 cut(s)	1216
BstSCI	CCNGG	4 cut(s)	1410, 1423, 1663, 3024
BstSFI	CTRYAG	4 cut(s)	365, 1310, 1731, 2779
BstSLI	GKGCMC	1 cut(s)	1801
BstUI	CGCG	3 cut(s)	323, 2323, 3074
BstV1I	GCAGC	4 cut(s)	160, 379, 1376, 2924
BstV2I	GAAGAC	6 cut(s)	480, 665, 849, 914, 1216, 3115
BstX2I	RGATCY	5 cut(s)	407, 515, 1318, 2467, 2727
BstXI	CCANNNNNNTGG	2 cut(s)	584, 1808
BstYI	RGATCY	5 cut(s)	407, 515, 1318, 2467, 2727
Bsu36I	CCTNAGG	2 cut(s)	819, 2558
BsuRI	GGCC	3 cut(s)	896, 2580, 2756
BtsCI	GGATG	6 cut(s)	508, 765, 1963, 2134, 2176, 2905
BtsIMutI	CAGTG	3 cut(s)	1617, 1845, 2140
BtuMI	TCGCGA	1 cut(s)	3074
BveI	ACCTGC	1 cut(s)	855
Cac8I	GCNNGC	7 cut(s)	932, 1785, 2327, 2831, 3051, 3055, 3072
CaiI	CAGNNNCTG	1 cut(s)	1424
CciI	TCATGA	3 cut(s)	694, 2748, 2859
CfoI	GCGC	3 cut(s)	958, 2244, 2325
Cfr10I	RCCGGY	1 cut(s)	774
Cfr13I	GGNCC	3 cut(s)	716, 1038, 1427
CseI	GACGC	2 cut(s)	329, 670
CsiI	ACCWGGT	1 cut(s)	1423
Csp6I	GTAC	4 cut(s)	2263, 2393, 2668, 2836
CviQI	GTAC	4 cut(s)	2263, 2393, 2668, 2836
DraI	TTTAAA	3 cut(s)	2122, 2191, 2659
EaeI	YGGCCR	2 cut(s)	894, 2578
Ecl136II	GAGCTC	1 cut(s)	91
Eco130I	CCWWGG	2 cut(s)	808, 2789
Eco24I	GRGCYC	2 cut(s)	93, 1075
Eco31I	GGTCTC	1 cut(s)	1247
Eco47I	GGWCC	3 cut(s)	716, 1038, 1427
Eco53kI	GAGCTC	1 cut(s)	91
Eco57I	CTGAAG	5 cut(s)	374, 483, 1031, 2502, 2822
Eco81I	CCTNAGG	2 cut(s)	819, 2558
Eco88I	CYCGRG	1 cut(s)	92
EcoICRI	GAGCTC	1 cut(s)	91
EcoO109I	RGGNCCY	1 cut(s)	1038
EcoRI	GAATTC	4 cut(s)	16, 630, 976, 2316
EcoRII	CCWGG	4 cut(s)	1410, 1423, 1663, 3024
EcoT14I	CCWWGG	2 cut(s)	808, 2789
EcoT38I	GRGCYC	2 cut(s)	93, 1075
ErhI	CCWWGG	2 cut(s)	808, 2789
FalI	AAGNNNNNCTT	2 cut(s)	234, 266
FaqI	GGGAC	4 cut(s)	453, 702, 1051, 1413
FauI	CCCGC	4 cut(s)	48, 2223, 2969, 3062
FauNDI	CATATG	1 cut(s)	723
FblI	GTMKAC	1 cut(s)	1776
Fnu4HI	GCNGC	8 cut(s)	138, 141, 174, 368, 1390, 2282, 2581, 2913
FokI	GGATG	6 cut(s)	515, 772, 1970, 2141, 2183, 2912
FriOI	GRGCYC	2 cut(s)	93, 1075
Fsp4HI	GCNGC	8 cut(s)	138, 141, 174, 368, 1390, 2282, 2581, 2913
FspBI	CTAG	4 cut(s)	851, 1698, 2313, 2733
GlaI	GCGC	3 cut(s)	957, 2243, 2324
GluI	GCNGC	8 cut(s)	138, 141, 174, 368, 1390, 2282, 2581, 2913
GsaI	CCCAGC	1 cut(s)	861
GsuI	CTGGAG	3 cut(s)	317, 1725, 2277
HaeIII	GGCC	3 cut(s)	896, 2580, 2756
HapII	CCGG	1 cut(s)	775
HgaI	GACGC	2 cut(s)	329, 670
HhaI	GCGC	3 cut(s)	958, 2244, 2325
Hin1I	GRCGYC	1 cut(s)	442
Hin6I	GCGC	3 cut(s)	956, 2242, 2323
HinP1I	GCGC	3 cut(s)	956, 2242, 2323
HincII	GTYRAC	1 cut(s)	1777
HindII	GTYRAC	1 cut(s)	1777
HindIII	AAGCTT	1 cut(s)	883
HpaII	CCGG	1 cut(s)	775
HphI	GGTGA	5 cut(s)	144, 1157, 1388, 1442, 1637
Hpy166II	GTNNAC	1 cut(s)	1777
Hpy8I	GTNNAC	1 cut(s)	1777
Hpy99I	CGWCG	5 cut(s)	125, 149, 167, 924, 3139
HpyAV	CCTTC	9 cut(s)	418, 429, 1055, 1243, 1309, 2453, 2609, 2746, 3138
HpyCH4III	ACNGT	6 cut(s)	531, 1068, 1948, 2118, 2135, 2855
HpyCH4IV	ACGT	6 cut(s)	235, 442, 793, 1354, 1513, 2395
HpyF10VI	GCNNNNNNNGC	8 cut(s)	301, 392, 1177, 1334, 1904, 2278, 2335, 3080
HpySE526I	ACGT	6 cut(s)	235, 442, 793, 1354, 1513, 2395
Hsp92I	GRCGYC	1 cut(s)	442
HspAI	GCGC	3 cut(s)	956, 2242, 2323
KflI	GGGWCCC	1 cut(s)	1038
LguI	GCTCTTC	2 cut(s)	45, 1080
LmnI	GCTCC	7 cut(s)	88, 122, 181, 739, 2296, 2532, 2674
Lsp1109I	GCAGC	4 cut(s)	160, 379, 1376, 2924
LweI	GCATC	9 cut(s)	249, 282, 967, 1272, 1627, 1894, 2071, 2098, 2978
MabI	ACCWGGT	1 cut(s)	1423
MaeI	CTAG	4 cut(s)	851, 1698, 2313, 2733
MaeII	ACGT	6 cut(s)	235, 442, 793, 1354, 1513, 2395
MaeIII	GTNAC	5 cut(s)	531, 877, 1589, 1625, 2849
MbiI	CCGCTC	2 cut(s)	55, 2665
MfeI	CAATTG	2 cut(s)	2209, 2439
MflI	RGATCY	5 cut(s)	407, 515, 1318, 2467, 2727
MhlI	GDGCHC	4 cut(s)	93, 1075, 1801, 2293
MlsI	TGGCCA	1 cut(s)	896
MluNI	TGGCCA	1 cut(s)	896
MlyI	GAGTC	4 cut(s)	308, 1859, 2977, 3133
MmeI	TCCRAC	2 cut(s)	144, 186
Mox20I	TGGCCA	1 cut(s)	896
MroXI	GAANNNNTTC	2 cut(s)	1131, 2096
MscI	TGGCCA	1 cut(s)	896
MslI	CAYNNNNRTG	1 cut(s)	1370
Msp20I	TGGCCA	1 cut(s)	896
MspA1I	CMGCKG	1 cut(s)	2072
MspI	CCGG	1 cut(s)	775
MspR9I	CCNGG	4 cut(s)	1412, 1425, 1665, 3026
MunI	CAATTG	2 cut(s)	2209, 2439
Mva1269I	GAATGC	1 cut(s)	313
MvaI	CCWGG	4 cut(s)	1412, 1425, 1665, 3026
MvnI	CGCG	3 cut(s)	323, 2323, 3074
MwoI	GCNNNNNNNGC	8 cut(s)	301, 392, 1177, 1334, 1904, 2278, 2335, 3080
NdeI	CATATG	1 cut(s)	723
NlaIV	GGNNCC	7 cut(s)	118, 718, 1039, 1040, 1429, 1766, 2469
NmuCI	GTSAC	3 cut(s)	877, 1625, 2849
NruI	TCGCGA	1 cut(s)	3074
NspI	RCATGY	1 cut(s)	2329
NspV	TTCGAA	2 cut(s)	14, 1207
PaeI	GCATGC	1 cut(s)	2329
PaeR7I	CTCGAG	1 cut(s)	92
PagI	TCATGA	3 cut(s)	694, 2748, 2859
PciSI	GCTCTTC	2 cut(s)	45, 1080
PcsI	WCGNNNNNNNCGW	1 cut(s)	668
PctI	GAATGC	1 cut(s)	313
PdmI	GAANNNNTTC	2 cut(s)	1131, 2096
PflFI	GACNNNGTC	1 cut(s)	2926
PflMI	CCANNNNNTGG	2 cut(s)	727, 2462
PkrI	GCNGC	8 cut(s)	139, 142, 175, 369, 1391, 2283, 2582, 2914
PleI	GAGTC	4 cut(s)	307, 1858, 2976, 3132
PpsI	GAGTC	4 cut(s)	307, 1858, 2976, 3132
Ppu21I	YACGTR	1 cut(s)	794
PpuMI	RGGWCCY	1 cut(s)	1038
PshAI	GACNNNNGTC	1 cut(s)	1216
PsiI	TTATAA	1 cut(s)	1457
Psp124BI	GAGCTC	1 cut(s)	93
Psp5II	RGGWCCY	1 cut(s)	1038
Psp6I	CCWGG	4 cut(s)	1410, 1423, 1663, 3024
PspFI	CCCAGC	1 cut(s)	857
PspGI	CCWGG	4 cut(s)	1410, 1423, 1663, 3024
PspN4I	GGNNCC	7 cut(s)	118, 718, 1039, 1040, 1429, 1766, 2469
PspPI	GGNCC	3 cut(s)	716, 1038, 1427
PspPPI	RGGWCCY	1 cut(s)	1038
PspXI	VCTCGAGB	1 cut(s)	92
PstI	CTGCAG	3 cut(s)	369, 1314, 1735
PstNI	CAGNNNCTG	1 cut(s)	1424
PsuI	RGATCY	5 cut(s)	407, 515, 1318, 2467, 2727
PsyI	GACNNNGTC	1 cut(s)	2926
PvuII	CAGCTG	1 cut(s)	2072
RruI	TCGCGA	1 cut(s)	3074
RsaI	GTAC	4 cut(s)	2264, 2394, 2669, 2837
RsaNI	GTAC	4 cut(s)	2263, 2393, 2668, 2836
RseI	CAYNNNNRTG	1 cut(s)	1370
SacI	GAGCTC	1 cut(s)	93
SalI	GTCGAC	1 cut(s)	1775
SapI	GCTCTTC	2 cut(s)	45, 1080
SatI	GCNGC	8 cut(s)	138, 141, 174, 368, 1390, 2282, 2581, 2913
Sau96I	GGNCC	3 cut(s)	716, 1038, 1427
ScaI	AGTACT	1 cut(s)	2264
SchI	GAGTC	4 cut(s)	308, 1859, 2977, 3133
ScrFI	CCNGG	4 cut(s)	1412, 1425, 1665, 3026
SduI	GDGCHC	4 cut(s)	93, 1075, 1801, 2293
SexAI	ACCWGGT	1 cut(s)	1423
SfaNI	GCATC	9 cut(s)	249, 282, 967, 1272, 1627, 1894, 2071, 2098, 2978
SfcI	CTRYAG	4 cut(s)	365, 1310, 1731, 2779
Sfr274I	CTCGAG	1 cut(s)	92
SfuI	TTCGAA	2 cut(s)	14, 1207
SinI	GGWCC	3 cut(s)	716, 1038, 1427
SlaI	CTCGAG	1 cut(s)	92
SmiMI	CAYNNNNRTG	1 cut(s)	1370
SmlI	CTYRAG	2 cut(s)	92, 1565
SmoI	CTYRAG	2 cut(s)	92, 1565
SphI	GCATGC	1 cut(s)	2329
SspMI	CTAG	4 cut(s)	851, 1698, 2313, 2733
SstI	GAGCTC	1 cut(s)	93
StyD4I	CCNGG	4 cut(s)	1410, 1423, 1663, 3024
StyI	CCWWGG	2 cut(s)	808, 2789
TaaI	ACNGT	6 cut(s)	531, 1068, 1948, 2118, 2135, 2855
TaiI	ACGT	6 cut(s)	238, 445, 796, 1357, 1516, 2398
TaqII	GACCGA	1 cut(s)	2387
TatI	WGTACW	2 cut(s)	2262, 2835
TauI	GCSGC	4 cut(s)	140, 143, 2284, 2583
TscAI	CASTG	3 cut(s)	1624, 1852, 2140
TseFI	GTSAC	3 cut(s)	877, 1625, 2849
TseI	GCWGC	4 cut(s)	173, 367, 1389, 2912
Tsp45I	GTSAC	3 cut(s)	877, 1625, 2849
TspGWI	ACGGA	1 cut(s)	180
TspRI	CASTG	3 cut(s)	1624, 1852, 2140
Tth111I	GACNNNGTC	1 cut(s)	2926
Van91I	CCANNNNNTGG	2 cut(s)	727, 2462
VpaK11BI	GGWCC	3 cut(s)	716, 1038, 1427
XceI	RCATGY	1 cut(s)	2329
XhoI	CTCGAG	1 cut(s)	92
XmiI	GTMKAC	1 cut(s)	1776
XmnI	GAANNNNTTC	2 cut(s)	1131, 2096
XspI	CTAG	4 cut(s)	851, 1698, 2313, 2733
ZraI	GACGTC	1 cut(s)	443
ZrmI	AGTACT	1 cut(s)	2264

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.