Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0008488

Physical Location & Seq

Genomic Coordinates Reverse (-)

11055766 .. 11063113

Gene Structure 7348 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G140700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3243 bp

ATGGCGAGAGCCTCGAAGCCGCAGGTGTCGTCCGATGAAGCCCTATCCAACGGCTCCAATTCGTCCGAGGAGGACCCGATCAATGACCAGGAGGAGGAGGTGGACGAGGAGGAGCTCGAGGCCGTGGCTCGCTCCGCTGATTCTGACGACGACGAGGCCGCCGCCGGCGACGCCTCCCCTGGCTCAGACGATGACGTGGCTGCCGATGAGAACGGCGATGACGGCTTTGAGGAGGATGAGGATGACGTCACTAATTTGAGTAATGCTGAAATTGGAAAACGTGAAAAGGCCAGGCTTAGAGATATGCAACAAATGAAGAAGCAAAAGGTTCAGGAAATTTTGGATACGCAAAATGCAGCCATTGATGCTGACATGAACAACAAGGGGAAGGGGCGGTTGAAGTATCTTCTGCAGCAAACAGAGTTATTTGCCCATTTTGCCAAAAGTGATCAATCTGCATCCCAGAAGAAAGTGAAGGGAAAAGGTCGCCATGCTTCAAAAATAACTGAAGAGGAAGAAGATGAAGAATGCCTTAAGGAGGAAGAAGATGGTTTGTCTGGGACTGGAACCACACGGCTGTTGACACAACCTTCTTGCATTCAGGGGAAGATGAGGGATTACCAACTTGCTGGGTTGAATTGGCTCATACGACTCTACGAAAATGGTATAAATGGAATCCTCGCAGATGAAATGGGGCTTGGTAAAACATTGCAAACCATCTCCTTGTTGGGATACCTGCATGAGTTTAGAGGGATAACTGGCCCTCATATGGTAGTTGCTCCAAAGTCAACACTTGGAAACTGGATGAATGAGATTCGGCGTTTCTGCCCCACCTTGCGTGCTGTAAAGTTTCTTGGTAATCCTGATGAAAGAAAGCATATACGTGAGGACCTGCTGGTTGCGGGAAATTTTGATGTCTGTGTTACAAGTTTTGAAATGGCCATCAAAGAGAAGACTTGCCTACGCCGTTTTAGCTGGCGCTATATAATCATTGACGAAGCCCATCGAATCAAGAACGAGAATTCACTGCTTTCAAAAACTATGAGGCTGTATAATACCAATTTCCGCCTTCTAATTACGGGCACACCACTTCAGAACAATCTCCATGAACTATGGTCTCTGCTTAACTTTCTTCTGCCCGAGATATTTAGTTCTGCAGAAACTTTTGATGAATGGTTTCAAATTTCTGGTGAAAATGACCAGCAGGAGGTTGTTCAACAGCTTCATAAGGTCCTTCGGCCATTTCTTCTCCGAAGGTTGAAGTCAGATGTTGAGAAAGGTTTGCCTCCGAAAAAGGAAACCATACTCAAAGTGGGCATGTCACAAATGCAAAAACAGTACTACAGGGCTTTACTGCAAAAAGATCTTGAAGTTGTTAATGCTGGCGGAGAACGTAAGCGCCTTCTGAACATAGCAATGCAGCTTCGTAAATGCTGCAATCATCCATATCTTTTTCAAGGTGCTGAGCCTGGGCCTCCTTATACAACTGGAGACCATCTTATCACAAATGCTGGCAAAATGGTTCTTTTGGATAAGTTGCTTCCAAAGTTAAAAGAACGTGATTCTAGGGTCTTAATATTTTCACAGATGACAAGGCTGCTAGATATTCTTGAAGATTATTTAATGTTTCGGGGCTACCTGTATTGTCGGATTGATGGAAATACTGGTGGAGAAGATCGTGATGCTTCCATTGATGCCTTTAATAAGCCTGGAAGTGAGAAATTTGTTTTTTTGCTATCAACCAGAGCTGGAGGACTTGGTATTAATCTTGCTACTGCAGATATTGTCATTCTTTATGATAGCGATTGGAACCCTCAAGTTGATTTGCAAGCACAAGACCGTGCTCACAGGATTGGTCAAAAGAAAGAAGTTCAAGTGTTCCGGTTCTGCACTGAGTATACTATTGAGGAGAAAGTGATTGAGAGGGCTTATAAAAAGCTTGCACTTGATGCTTTGGTGATTCAACAAGGGAGATTAGCAGAGCAAAAAACTGTTAATAAAGATGAGTTACTTCAAATGGTGAGGTTTGGTGCTGAAATGGTTTTCAGCTCCAAGGACAGTACAATTACTGATGAGGACATCGATAGAATCATTGCTAAAGGAGAAGAGGCAACTGCTGAGCTTGATGCAAAGATGAAGAAATTTACTGAAGATGCTATAAAATTTAAGATGGATGATACTGCTGAATTGTATGACTTTGATGATGAGAAGGATGAGAAGCTCGACTTCAAGAAAATTGTTAGCGACAACTGGATTGAGCCACCAAAAAGAGAGAGGAAGCGCAATTACTCGGAGTCAGAATATTTTAAGCAAACAATGCGCCAAGGTGGTCCAGCAAAACCAAAAGAGCCTCGAATTCCACGCATGCCTCAATTACATGATTTCCAATTTTTTAATACACAGAGGCTCAGTGAGCTGTATGAAAAGGAAGTACGCTACCTCATGCAAACACATCAAAAGAATCAGGTGAAAGACACAATAGAGGTGGATGAACCAGAAGGTACTTATTTCGGGGATCCATTGACTGCTGAAGAGGTGGAAGAAAAGGAACGTCTGTTAGAAGAGGGTTTCTCTTCTTGGAGTAGAAGAGATTTCAATACATTCATTAGGGCCTGTGAGAAGTATGGCCGAAATGACATAAAAAGCATTGCTGCCGAGATGGAGGGGAAAACAGAGGAGGAAGTTGAAAGATATGCAAAGGCTTTTAAAGAAAGATACAAGGAGTTAAATGATTATGATAGAATCATTAAGAACATTGAAAGAGGAGAGGCTAGGATTTCCCGGAAAGATGAGATCATGAAAGCTATTGGGAAGAAGTTGGATCGTTACAAGAATCCATGGCTGGAACTGAAGATCCAGTATGGTCAGAACAAGGGGAAGTTGTACAATGAAGAATGTGATCGTTTCATGATATGCATGGTTCACAAGCTCGGATATGGGAACTGGGATGAGTTGAAGGCAGCATTTCGCACGTCACCCTTGTTTCGTTTTGATTGGTTTGTGAAGTCTCGCACAACTCAGGAACTTGCTAGGAGGTGTGATACATTAATAAGATTGGTGGAGAAAGAGAACCAAGAATATGACGAGAGGGAGAGACAAGCCCGCAAAGAGAAGAAGCTTGCTAAGAGCATGACACCATCAAAGCGTGCCATGGGTAGGCAGCCGACTGAGAGCCCGACTTCTGGAAAGAAGAGGAAGCAGTTAACTATGGATGATTATGTCTCGGGAAAGAGGAGAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006323 GO:0006325 GO:0006333 GO:0006996 GO:0007275 GO:0008150 GO:0009553 GO:0009561 GO:0009987 GO:0016043 GO:0016584 GO:0022607 GO:0031497 GO:0032501 GO:0032502 GO:0034728 GO:0040034 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044464 GO:0048229 GO:0048506 GO:0048509 GO:0048510 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051276 GO:0065007 GO:0071103 GO:0071824 GO:0071840 GO:0080134 GO:0080135 GO:1900034 GO:1900036

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DBINO HAND Helicase_C SLIDE SNF2_N

Protein Analysis

1081

Amino Acids

124.86

Weight (kDa)

5.65

Isoelectric Point (pI)

41.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008488)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06400 AT3G06400 AT3G06400 AT5G18620 AT5G18620
fragaria_vesca	FvH4_4g17400 FvH4_4g17400
malus_domestica	MD13G1172500.v1.1 MD16G1173900.v1.1
prunus_persica	Prupe.1G140700_v2.0.a1 Prupe.1G140700_v2.0.a1 Prupe.1G140700_v2.0.a1
pyrus_communis	pycom13g14810
rosa_chinensis	RchiOBHm_Chr4g0421321
rosa_laevigata	RLG00000007697
rosa_multiflora	Rmu_sc0015713.1_g000006
rosa_roxburghii	Rroxscaffold_5G00363560
rosa_rugosa	Rorug04G0168900
rosa_samantha	Rh4AG230900 Rh4BG233900 Rh4CG245300 Rh4DG229500
rosa_wichuraiana	Rw4G020300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1932
AarI	CACCTGC	1 cut(s)	13
AatII	GACGTC	1 cut(s)	249
Acc36I	ACCTGC	3 cut(s)	13, 744, 900
AccI	GTMKAC	1 cut(s)	1898
AciI	CCGC	9 cut(s)	20, 135, 159, 162, 394, 902, 1066, 1386, 3103
AclWI	GGATC	4 cut(s)	2510, 2523, 2829, 2848
AcoI	YGGCCR	3 cut(s)	939, 1238, 2626
AcsI	RAATTY	8 cut(s)	336, 907, 1021, 1182, 1721, 2141, 2162, 2355
AcuI	CTGAAG	5 cut(s)	528, 1076, 2169, 2550, 2870
AcyI	GRCGYC	2 cut(s)	171, 246
AfaI	GTAC	5 cut(s)	1340, 2062, 2433, 2503, 2885
AfiI	CCNNNNNNNGG	6 cut(s)	94, 538, 769, 1207, 3156, 3182
AflII	CTTAAG	1 cut(s)	533
AjiI	CACGTC	2 cut(s)	196, 2973
AjnI	CCWGG	5 cut(s)	87, 178, 290, 1468, 1708
AjuI	GAANNNNNNNTTGG	2 cut(s)	681, 713
AloI	GAACNNNNNNTCC	2 cut(s)	2838, 2870
Alw21I	GWGCWC	2 cut(s)	117, 1846
Alw26I	GTCTC	5 cut(s)	1122, 1485, 3012, 3088, 3226
AlwI	GGATC	4 cut(s)	2510, 2523, 2829, 2848
Ama87I	CYCGRG	3 cut(s)	116, 1139, 3223
AoxI	GGCC	9 cut(s)	120, 156, 288, 760, 939, 1238, 1472, 2610, 2626
ApeKI	GCWGC	9 cut(s)	200, 356, 412, 1420, 1434, 1597, 2651, 2960, 3160
ApoI	RAATTY	8 cut(s)	336, 907, 1021, 1182, 1721, 2141, 2162, 2355
AseI	ATTAAT	2 cut(s)	1764, 3047
Asp700I	GAANNNNTTC	1 cut(s)	1176
AspLEI	GCGC	4 cut(s)	981, 1401, 2283, 2322
AspS9I	GGNCC	7 cut(s)	73, 761, 889, 1231, 1472, 2330, 2610
AsuC2I	CCSGG	1 cut(s)	2782
AsuHPI	GGTGA	5 cut(s)	1202, 1969, 2032, 2479, 2967
AvaI	CYCGRG	3 cut(s)	116, 1139, 3223
AvaII	GGWCC	4 cut(s)	73, 889, 1231, 2330
BaeGI	GKGCMC	1 cut(s)	1085
BalI	TGGCCA	1 cut(s)	941
BamHI	GGATCC	1 cut(s)	2515
BanII	GRGCYC	2 cut(s)	117, 3176
BarI	GAAGNNNNNNTAC	2 cut(s)	2270, 2302
BbsI	GAAGAC	1 cut(s)	959
Bbv12I	GWGCWC	2 cut(s)	117, 1846
BbvI	GCAGC	9 cut(s)	187, 368, 424, 1421, 1432, 1584, 2638, 2972, 3172
BccI	CCATC	9 cut(s)	542, 725, 950, 1011, 1503, 1649, 2164, 2653, 3145
BceAI	ACGGC	6 cut(s)	67, 107, 229, 238, 590, 951
BciT130I	CCWGG	5 cut(s)	89, 180, 292, 1470, 1710
BciVI	GTATCC	2 cut(s)	337, 725
BclI	TGATCA	1 cut(s)	448
BcnI	CCSGG	1 cut(s)	2782
BcoDI	GTCTC	5 cut(s)	1122, 1485, 3012, 3088, 3226
BfaI	CTAG	4 cut(s)	1566, 1601, 2772, 3030
BfmI	CTRYAG	4 cut(s)	410, 1155, 1342, 1776
BfoI	RGCGCY	2 cut(s)	982, 1402
BfrI	CTTAAG	1 cut(s)	533
BfuAI	ACCTGC	3 cut(s)	13, 744, 900
BfuI	GTATCC	2 cut(s)	337, 725
BglII	AGATCT	1 cut(s)	1363
BlpI	GCTNAGC	2 cut(s)	1464, 2118
BmcAI	AGTACT	1 cut(s)	1340
Bme1390I	CCNGG	6 cut(s)	89, 180, 292, 1470, 1710, 2782
Bme18I	GGWCC	4 cut(s)	73, 889, 1231, 2330
BmeT110I	CYCGRG	3 cut(s)	116, 1139, 3223
BmgBI	CACGTC	2 cut(s)	196, 2973
BmgT120I	GGNCC	7 cut(s)	73, 761, 889, 1231, 1472, 2330, 2610
BmiI	GGNNCC	5 cut(s)	55, 75, 568, 1811, 2517
BmrFI	CCNGG	6 cut(s)	89, 180, 292, 1470, 1710, 2782
BmrI	ACTGGG	1 cut(s)	2953
BmsI	GCATC	7 cut(s)	355, 467, 1672, 1684, 1939, 2116, 2143
BmuI	ACTGGG	1 cut(s)	2953
BpiI	GAAGAC	1 cut(s)	959
BplI	GAGNNNNNCTC	2 cut(s)	2555, 2587
BpmI	CTGGAG	2 cut(s)	1509, 1770
Bpu1102I	GCTNAGC	2 cut(s)	1464, 2118
BpuEI	CTTGAG	1 cut(s)	1800
BpuMI	CCSGG	1 cut(s)	2782
Bsa29I	ATCGAT	1 cut(s)	2082
BsaAI	YACGTR	1 cut(s)	884
BsaHI	GRCGYC	2 cut(s)	171, 246
BsaI	GGTCTC	2 cut(s)	1122, 1485
BsaJI	CCNNGG	8 cut(s)	66, 123, 178, 1469, 2052, 2323, 2837, 3150
BsaWI	WCCGGW	1 cut(s)	1881
Bsc4I	CCNNNNNNNGG	6 cut(s)	94, 538, 769, 1207, 3156, 3182
Bse118I	RCCGGY	1 cut(s)	164
Bse1I	ACTGG	8 cut(s)	568, 763, 806, 1492, 1669, 2255, 2857, 2948
Bse3DI	GCAATG	4 cut(s)	707, 1422, 2091, 2646
BseBI	CCWGG	5 cut(s)	89, 180, 292, 1470, 1710
BseCI	ATCGAT	1 cut(s)	2082
BseDI	CCNNGG	8 cut(s)	66, 123, 178, 1469, 2052, 2323, 2837, 3150
BseLI	CCNNNNNNNGG	6 cut(s)	94, 538, 769, 1207, 3156, 3182
BseMI	GCAATG	4 cut(s)	707, 1422, 2091, 2646
BseMII	CTCAG	7 cut(s)	198, 1455, 1884, 2109, 2422, 3032, 3159
BseNI	ACTGG	8 cut(s)	568, 763, 806, 1492, 1669, 2255, 2857, 2948
BseRI	GAGGAG	9 cut(s)	83, 107, 110, 122, 125, 245, 1922, 2690, 2778
BseSI	GKGCMC	1 cut(s)	1085
BseXI	GCAGC	9 cut(s)	187, 368, 424, 1421, 1432, 1584, 2638, 2972, 3172
BseYI	CCCAGC	1 cut(s)	629
BsgI	GTGCAG	1 cut(s)	1873
BshFI	GGCC	9 cut(s)	122, 158, 290, 762, 941, 1240, 1474, 2612, 2628
BshVI	ATCGAT	1 cut(s)	2082
BsiHKAI	GWGCWC	2 cut(s)	117, 1846
BsiHKCI	CYCGRG	3 cut(s)	116, 1139, 3223
BsiSI	CCGG	3 cut(s)	165, 1882, 2782
BslFI	GGGAC	1 cut(s)	574
BslI	CCNNNNNNNGG	6 cut(s)	94, 538, 769, 1207, 3156, 3182
BsmAI	GTCTC	5 cut(s)	1122, 1485, 3012, 3088, 3226
BsmFI	GGGAC	1 cut(s)	574
BsmI	GAATGC	2 cut(s)	533, 597
BsnI	GGCC	9 cut(s)	122, 158, 290, 762, 941, 1240, 1474, 2612, 2628
Bso31I	GGTCTC	2 cut(s)	1122, 1485
BsoBI	CYCGRG	3 cut(s)	116, 1139, 3223
Bsp1286I	GDGCHC	4 cut(s)	117, 1085, 1846, 3176
Bsp1407I	TGTACA	1 cut(s)	2883
Bsp143I	GATC	9 cut(s)	78, 448, 1363, 1675, 2515, 2793, 2821, 2853, 2899
Bsp1720I	GCTNAGC	2 cut(s)	1464, 2118
Bsp19I	CCATGG	2 cut(s)	2837, 3150
BspACI	CCGC	9 cut(s)	20, 135, 159, 162, 394, 902, 1066, 1386, 3103
BspANI	GGCC	9 cut(s)	122, 158, 290, 762, 941, 1240, 1474, 2612, 2628
BspCNI	CTCAG	7 cut(s)	197, 1456, 1885, 2110, 2421, 3031, 3160
BspDI	ATCGAT	1 cut(s)	2082
BspHI	TCATGA	2 cut(s)	2796, 2907
BspLI	GGNNCC	5 cut(s)	55, 75, 568, 1811, 2517
BspMAI	CTGCAG	3 cut(s)	414, 1159, 1780
BspMI	ACCTGC	3 cut(s)	13, 744, 900
BspPI	GGATC	4 cut(s)	2510, 2523, 2829, 2848
BspTI	CTTAAG	1 cut(s)	533
BspTNI	GGTCTC	2 cut(s)	1122, 1485
BsrDI	GCAATG	4 cut(s)	707, 1422, 2091, 2646
BsrFI	RCCGGY	1 cut(s)	164
BsrGI	TGTACA	1 cut(s)	2883
BsrI	ACTGG	8 cut(s)	568, 763, 806, 1492, 1669, 2255, 2857, 2948
BssAI	RCCGGY	1 cut(s)	164
BssECI	CCNNGG	8 cut(s)	66, 123, 178, 1469, 2052, 2323, 2837, 3150
BssMI	GATC	9 cut(s)	78, 448, 1363, 1675, 2515, 2793, 2821, 2853, 2899
BssNAI	GTATAC	1 cut(s)	1899
BssNI	GRCGYC	2 cut(s)	171, 246
BssT1I	CCWWGG	4 cut(s)	2052, 2323, 2837, 3150
Bst1107I	GTATAC	1 cut(s)	1899
Bst2UI	CCWGG	5 cut(s)	89, 180, 292, 1470, 1710
Bst4CI	ACNGT	4 cut(s)	1338, 1841, 1993, 2060
Bst6I	CTCTTC	7 cut(s)	504, 2100, 2526, 2556, 2578, 2581, 3185
BstACI	GRCGYC	2 cut(s)	171, 246
BstAFI	CTTAAG	1 cut(s)	533
BstAPI	GCANNNNNTGC	2 cut(s)	1949, 2317
BstAUI	TGTACA	1 cut(s)	2883
BstBAI	YACGTR	1 cut(s)	884
BstDEI	CTNAG	9 cut(s)	184, 296, 1464, 1893, 2118, 2408, 3018, 3123, 3168
BstDSI	CCRYGG	3 cut(s)	123, 2837, 3150
BstENI	CCTNNNNNAGG	1 cut(s)	536
BstH2I	RGCGCY	2 cut(s)	982, 1402
BstHHI	GCGC	4 cut(s)	981, 1401, 2283, 2322
BstKTI	GATC	9 cut(s)	81, 451, 1366, 1678, 2518, 2796, 2824, 2856, 2902
BstMAI	GTCTC	5 cut(s)	1122, 1485, 3012, 3088, 3226
BstMBI	GATC	9 cut(s)	78, 448, 1363, 1675, 2515, 2793, 2821, 2853, 2899
BstMWI	GCNNNNNNNGC	9 cut(s)	134, 170, 222, 365, 437, 972, 1949, 2317, 2413
BstNI	CCWGG	5 cut(s)	89, 180, 292, 1470, 1710
BstNSI	RCATGY	2 cut(s)	1321, 2368
BstSCI	CCNGG	6 cut(s)	87, 178, 290, 1468, 1708, 2780
BstSFI	CTRYAG	4 cut(s)	410, 1155, 1342, 1776
BstSLI	GKGCMC	1 cut(s)	1085
BstV1I	GCAGC	9 cut(s)	187, 368, 424, 1421, 1432, 1584, 2638, 2972, 3172
BstV2I	GAAGAC	1 cut(s)	959
BstX2I	RGATCY	3 cut(s)	1363, 2515, 2853
BstXI	CCANNNNNNTGG	1 cut(s)	629
BstYI	RGATCY	3 cut(s)	1363, 2515, 2853
BstZ17I	GTATAC	1 cut(s)	1899
Bsu15I	ATCGAT	1 cut(s)	2082
BsuI	GTATCC	2 cut(s)	337, 725
BsuRI	GGCC	9 cut(s)	122, 158, 290, 762, 941, 1240, 1474, 2612, 2628
BsuTUI	ATCGAT	1 cut(s)	2082
BtgI	CCRYGG	3 cut(s)	123, 2837, 3150
BtgZI	GCGATG	1 cut(s)	231
BtrI	CACGTC	2 cut(s)	196, 2973
BtsI	GCAGTG	1 cut(s)	1025
BtsIMutI	CAGTG	3 cut(s)	1025, 1890, 2416
BveI	ACCTGC	3 cut(s)	13, 744, 900
CciI	TCATGA	2 cut(s)	2796, 2907
CfoI	GCGC	4 cut(s)	981, 1401, 2283, 2322
Cfr10I	RCCGGY	1 cut(s)	164
Cfr13I	GGNCC	7 cut(s)	73, 761, 889, 1231, 1472, 2330, 2610
ClaI	ATCGAT	1 cut(s)	2082
CseI	GACGC	1 cut(s)	179
Csp6I	GTAC	5 cut(s)	1339, 2061, 2432, 2502, 2884
CspCI	CAANNNNNGTGG	2 cut(s)	2466, 2501
CviQI	GTAC	5 cut(s)	1339, 2061, 2432, 2502, 2884
DdeI	CTNAG	9 cut(s)	184, 296, 1464, 1893, 2118, 2408, 3018, 3123, 3168
DpnI	GATC	9 cut(s)	80, 450, 1365, 1677, 2517, 2795, 2823, 2855, 2901
DpnII	GATC	9 cut(s)	78, 448, 1363, 1675, 2515, 2793, 2821, 2853, 2899
DraI	TTTAAA	1 cut(s)	2707
EaeI	YGGCCR	3 cut(s)	939, 1238, 2626
Eam1104I	CTCTTC	7 cut(s)	504, 2100, 2526, 2556, 2578, 2581, 3185
EarI	CTCTTC	7 cut(s)	504, 2100, 2526, 2556, 2578, 2581, 3185
EciI	GGCGGA	2 cut(s)	1055, 1401
Ecl136II	GAGCTC	1 cut(s)	115
Eco130I	CCWWGG	4 cut(s)	2052, 2323, 2837, 3150
Eco24I	GRGCYC	2 cut(s)	117, 3176
Eco31I	GGTCTC	2 cut(s)	1122, 1485
Eco47I	GGWCC	4 cut(s)	73, 889, 1231, 2330
Eco53kI	GAGCTC	1 cut(s)	115
Eco57I	CTGAAG	5 cut(s)	528, 1076, 2169, 2550, 2870
Eco88I	CYCGRG	3 cut(s)	116, 1139, 3223
EcoICRI	GAGCTC	1 cut(s)	115
EcoNI	CCTNNNNNAGG	1 cut(s)	536
EcoO109I	RGGNCCY	4 cut(s)	73, 889, 1231, 2610
EcoRI	GAATTC	2 cut(s)	1021, 2355
EcoRII	CCWGG	5 cut(s)	87, 178, 290, 1468, 1708
EcoT14I	CCWWGG	4 cut(s)	2052, 2323, 2837, 3150
EcoT22I	ATGCAT	1 cut(s)	2918
EcoT38I	GRGCYC	2 cut(s)	117, 3176
ErhI	CCWWGG	4 cut(s)	2052, 2323, 2837, 3150
FalI	AAGNNNNNCTT	4 cut(s)	516, 548, 2210, 2242
FaqI	GGGAC	1 cut(s)	574
FauI	CCCGC	2 cut(s)	895, 3110
FauNDI	CATATG	1 cut(s)	768
FbaI	TGATCA	1 cut(s)	448
FblI	GTMKAC	1 cut(s)	1898
FriOI	GRGCYC	2 cut(s)	117, 3176
FspBI	CTAG	4 cut(s)	1566, 1601, 2772, 3030
GlaI	GCGC	4 cut(s)	980, 1400, 2282, 2321
GsaI	CCCAGC	1 cut(s)	633
GsuI	CTGGAG	2 cut(s)	1509, 1770
HaeII	RGCGCY	2 cut(s)	982, 1402
HaeIII	GGCC	9 cut(s)	122, 158, 290, 762, 941, 1240, 1474, 2612, 2628
HapII	CCGG	3 cut(s)	165, 1882, 2782
HgaI	GACGC	1 cut(s)	179
HhaI	GCGC	4 cut(s)	981, 1401, 2283, 2322
Hin1I	GRCGYC	2 cut(s)	171, 246
Hin6I	GCGC	4 cut(s)	979, 1399, 2281, 2320
HinP1I	GCGC	4 cut(s)	979, 1399, 2281, 2320
HincII	GTYRAC	3 cut(s)	582, 789, 3204
HindII	GTYRAC	3 cut(s)	582, 789, 3204
HindIII	AAGCTT	2 cut(s)	1937, 3116
HpaI	GTTAAC	1 cut(s)	3204
HpaII	CCGG	3 cut(s)	165, 1882, 2782
HphI	GGTGA	5 cut(s)	1202, 1969, 2032, 2479, 2967
Hpy166II	GTNNAC	6 cut(s)	103, 582, 789, 1899, 2923, 3204
Hpy8I	GTNNAC	6 cut(s)	103, 582, 789, 1899, 2923, 3204
Hpy99I	CGWCG	3 cut(s)	152, 155, 173
HpyCH4III	ACNGT	4 cut(s)	1338, 1841, 1993, 2060
HpyCH4IV	ACGT	8 cut(s)	195, 246, 280, 883, 1393, 1558, 2551, 2972
HpyF10VI	GCNNNNNNNGC	9 cut(s)	134, 170, 222, 365, 437, 972, 1949, 2317, 2413
HpyF3I	CTNAG	9 cut(s)	184, 296, 1464, 1893, 2118, 2408, 3018, 3123, 3168
HpySE526I	ACGT	8 cut(s)	195, 246, 280, 883, 1393, 1558, 2551, 2972
Hsp92I	GRCGYC	2 cut(s)	171, 246
HspAI	GCGC	4 cut(s)	979, 1399, 2281, 2320
KroI	GCCGGC	1 cut(s)	164
KroNI	GCCGGC	1 cut(s)	166
Ksp22I	TGATCA	1 cut(s)	448
KspAI	GTTAAC	1 cut(s)	3204
Kzo9I	GATC	9 cut(s)	78, 448, 1363, 1675, 2515, 2793, 2821, 2853, 2899
LmnI	GCTCC	5 cut(s)	59, 112, 137, 784, 2054
Lsp1109I	GCAGC	9 cut(s)	187, 368, 424, 1421, 1432, 1584, 2638, 2972, 3172
LweI	GCATC	7 cut(s)	355, 467, 1672, 1684, 1939, 2116, 2143
MaeI	CTAG	4 cut(s)	1566, 1601, 2772, 3030
MaeII	ACGT	8 cut(s)	195, 246, 280, 883, 1393, 1558, 2551, 2972
MaeIII	GTNAC	6 cut(s)	247, 922, 1320, 2007, 2825, 2973
MalI	GATC	9 cut(s)	80, 450, 1365, 1677, 2517, 2795, 2823, 2855, 2901
MboI	GATC	9 cut(s)	78, 448, 1363, 1675, 2515, 2793, 2821, 2853, 2899
MflI	RGATCY	3 cut(s)	1363, 2515, 2853
MhlI	GDGCHC	4 cut(s)	117, 1085, 1846, 3176
MlsI	TGGCCA	1 cut(s)	941
MluNI	TGGCCA	1 cut(s)	941
MlyI	GAGTC	2 cut(s)	645, 2303
MmeI	TCCRAC	3 cut(s)	72, 1628, 2799
Mox20I	TGGCCA	1 cut(s)	941
Mph1103I	ATGCAT	1 cut(s)	2918
MreI	CGCCGGCG	1 cut(s)	164
MroNI	GCCGGC	1 cut(s)	164
MroXI	GAANNNNTTC	1 cut(s)	1176
MscI	TGGCCA	1 cut(s)	941
MslI	CAYNNNNRTG	2 cut(s)	882, 1415
Msp20I	TGGCCA	1 cut(s)	941
MspA1I	CMGCKG	1 cut(s)	137
MspCI	CTTAAG	1 cut(s)	533
MspI	CCGG	3 cut(s)	165, 1882, 2782
MspR9I	CCNGG	6 cut(s)	89, 180, 292, 1470, 1710, 2782
Mva1269I	GAATGC	2 cut(s)	533, 597
MvaI	CCWGG	5 cut(s)	89, 180, 292, 1470, 1710
MwoI	GCNNNNNNNGC	9 cut(s)	134, 170, 222, 365, 437, 972, 1949, 2317, 2413
NaeI	GCCGGC	1 cut(s)	166
NciI	CCSGG	1 cut(s)	2782
NcoI	CCATGG	2 cut(s)	2837, 3150
NdeI	CATATG	1 cut(s)	768
NdeII	GATC	9 cut(s)	78, 448, 1363, 1675, 2515, 2793, 2821, 2853, 2899
NgoMIV	GCCGGC	1 cut(s)	164
NlaIV	GGNNCC	5 cut(s)	55, 75, 568, 1811, 2517
NmeAIII	GCCGAG	1 cut(s)	2680
NmuCI	GTSAC	3 cut(s)	247, 1320, 2973
NsiI	ATGCAT	1 cut(s)	2918
NspI	RCATGY	2 cut(s)	1321, 2368
PaeI	GCATGC	1 cut(s)	2368
PaeR7I	CTCGAG	1 cut(s)	116
PagI	TCATGA	2 cut(s)	2796, 2907
PaqCI	CACCTGC	1 cut(s)	13
PcsI	WCGNNNNNNNCGW	1 cut(s)	201
PctI	GAATGC	2 cut(s)	533, 597
PdiI	GCCGGC	1 cut(s)	166
PdmI	GAANNNNTTC	1 cut(s)	1176
PfoI	TCCNGGA	1 cut(s)	2780
PleI	GAGTC	2 cut(s)	645, 2302
PpsI	GAGTC	2 cut(s)	645, 2302
Ppu21I	YACGTR	1 cut(s)	884
PpuMI	RGGWCCY	3 cut(s)	73, 889, 1231
PshBI	ATTAAT	2 cut(s)	1764, 3047
PsiI	TTATAA	1 cut(s)	1932
Psp124BI	GAGCTC	1 cut(s)	117
Psp5II	RGGWCCY	3 cut(s)	73, 889, 1231
Psp6I	CCWGG	5 cut(s)	87, 178, 290, 1468, 1708
PspFI	CCCAGC	1 cut(s)	629
PspGI	CCWGG	5 cut(s)	87, 178, 290, 1468, 1708
PspN4I	GGNNCC	5 cut(s)	55, 75, 568, 1811, 2517
PspPI	GGNCC	7 cut(s)	73, 761, 889, 1231, 1472, 2330, 2610
PspPPI	RGGWCCY	3 cut(s)	73, 889, 1231
PspXI	VCTCGAGB	1 cut(s)	116
PstI	CTGCAG	3 cut(s)	414, 1159, 1780
PsuI	RGATCY	3 cut(s)	1363, 2515, 2853
RsaI	GTAC	5 cut(s)	1340, 2062, 2433, 2503, 2885
RsaNI	GTAC	5 cut(s)	1339, 2061, 2432, 2502, 2884
RseI	CAYNNNNRTG	2 cut(s)	882, 1415
SacI	GAGCTC	1 cut(s)	117
Sau3AI	GATC	9 cut(s)	78, 448, 1363, 1675, 2515, 2793, 2821, 2853, 2899
Sau96I	GGNCC	7 cut(s)	73, 761, 889, 1231, 1472, 2330, 2610
ScaI	AGTACT	1 cut(s)	1340
SchI	GAGTC	2 cut(s)	645, 2303
ScrFI	CCNGG	6 cut(s)	89, 180, 292, 1470, 1710, 2782
SduI	GDGCHC	4 cut(s)	117, 1085, 1846, 3176
SfaNI	GCATC	7 cut(s)	355, 467, 1672, 1684, 1939, 2116, 2143
SfcI	CTRYAG	4 cut(s)	410, 1155, 1342, 1776
Sfr274I	CTCGAG	1 cut(s)	116
SgrAI	CRCCGGYG	1 cut(s)	164
SinI	GGWCC	4 cut(s)	73, 889, 1231, 2330
SlaI	CTCGAG	1 cut(s)	116
SmiMI	CAYNNNNRTG	2 cut(s)	882, 1415
SmlI	CTYRAG	3 cut(s)	116, 533, 1815
SmoI	CTYRAG	3 cut(s)	116, 533, 1815
SphI	GCATGC	1 cut(s)	2368
SsiI	CCGC	9 cut(s)	20, 135, 159, 162, 394, 902, 1066, 1386, 3103
SspI	AATATT	2 cut(s)	1578, 2303
SspMI	CTAG	4 cut(s)	1566, 1601, 2772, 3030
SstI	GAGCTC	1 cut(s)	117
StyD4I	CCNGG	6 cut(s)	87, 178, 290, 1468, 1708, 2780
StyI	CCWWGG	4 cut(s)	2052, 2323, 2837, 3150
TaaI	ACNGT	4 cut(s)	1338, 1841, 1993, 2060
TaiI	ACGT	8 cut(s)	198, 249, 283, 886, 1396, 1561, 2554, 2975
TaqI	TCGA	6 cut(s)	14, 117, 1006, 2082, 2223, 2353
TatI	WGTACW	3 cut(s)	1338, 2060, 2883
TauI	GCSGC	3 cut(s)	22, 161, 164
TscAI	CASTG	3 cut(s)	1032, 1897, 2416
TseFI	GTSAC	3 cut(s)	247, 1320, 2973
TseI	GCWGC	9 cut(s)	200, 356, 412, 1420, 1434, 1597, 2651, 2960, 3160
Tsp45I	GTSAC	3 cut(s)	247, 1320, 2973
TspRI	CASTG	3 cut(s)	1032, 1897, 2416
Vha464I	CTTAAG	1 cut(s)	533
VpaK11BI	GGWCC	4 cut(s)	73, 889, 1231, 2330
VspI	ATTAAT	2 cut(s)	1764, 3047
XagI	CCTNNNNNAGG	1 cut(s)	536
XapI	RAATTY	8 cut(s)	336, 907, 1021, 1182, 1721, 2141, 2162, 2355
XceI	RCATGY	2 cut(s)	1321, 2368
XcmI	CCANNNNNNNNNTGG	2 cut(s)	724, 1309
XhoI	CTCGAG	1 cut(s)	116
XmiI	GTMKAC	1 cut(s)	1898
XmnI	GAANNNNTTC	1 cut(s)	1176
XspI	CTAG	4 cut(s)	1566, 1601, 2772, 3030
ZraI	GACGTC	1 cut(s)	247
ZrmI	AGTACT	1 cut(s)	1340
Zsp2I	ATGCAT	1 cut(s)	2918

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.