Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0008488

Physical Location & Seq

Genomic Coordinates Reverse (-)

29732611 .. 29785242

Gene Structure 52632 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0168900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGGTATGGTGTACTTTCTGTGTCAAAAATGTTGAAGGAACCAGCGATGCTGGTAGACTATGGTGTTCCGGATGCGGCAAGGTTTTAGAGGATCACATTTTCTCTGAGGAACCCACTTTCGTTAAGAATGCGGCGGGCCAGAGCCAATTGGCTGGAAGATATGTACGCTCCAGGGAAAGCGAAATCTCAGCTTCTCGTGAAAGGATACTCGAAAATGCCGAATATGAATTGAGATGTATGAGAAATGCTTTAGATATGGGAGACAATGAAGAAATTATTGACATAGCTAAACGCTTTTATAGAATTGCGATTGAGCGGAATTTCACAAGGGGCCGTAAGTCAGAGCAAGTACAGGCTGCATGTCTTTACATTGCATGTCGGGAAAAGAAGAAGCCATATCTTCTCATTGATTTTTCGAACTACTTGAAGATAAATGTCTATGTGCTGGGAGCCGTGTTTTTGCAACTTTGCAAGGCTCTGAGGCTTGATGAGCACCCAATTGTTCAAAAACTTGTTGATCCTTCCTGGTTTATTCATAGATTTGCTGAGAGTTTACCAGGAGGAAGGGATAAAGGGGTTATGCAAACTGCACAAAGGATTATCACAAGCATGAAACGGGATTGGATGCAGACAGGCAGAAAACCCAGTGGACTTTGTGGTGCTGCATTATATATATCAGCACTTTCACACGGTCTCAAGTGCTCCAAATCTGATATTATCAAAATTGTACATGTTTGTGATGCTACATTGACTAAGCGGCTGGTTGAATTTGAGAATACAGAATCTGGGAGCTTGACGATTGAAGAGTTCCTCGTGAAGGCAAAGGAACTGGATGAATTAAGCAAACAACCAATTATGGCTGATAAAATGGATAATACAGATGGTGGCCTTTGTGAACACAAGATCCTTTGTGAACATAAGGATAGTGGAAAACCTTTTGCTTATGGACTTTGTCAAACCTGTTATGATGATTTTATGACAATTTCAGGTGGACTTGACGGAGGATCTAATCCTCCAGCTTTCCAGCGTGCTGAAATAGAGAGATTGAAAAAAGCATCTGCGGAGCTTAATGCTAATGACTCTGGCATCGATACCATTGCTTGTCAAAGCCTTGACAACAGTGATCAGTCATCCAAGTTTGAGAAAGAGAACAACACAAAATCAGGAAGTGAGAATAAAGGACTGCTGCTTATGGAGCCTGAAAGTGATGGGGCTGCTATGGAGAATACAGCTGTTGAGACCGGAACTGAAGCTTGTGATGATGAGTCTGACAACTTTTCAGATATTGATGATCTGGAGGTTGACGGCTACCTTCTTAATGAAGAGGGGAAACGCTACAAAAAGATGATTTGGGAAGAAATGAATCGTGAGTACATTGAGGAGCAAGCAGCTAAGGAGGAAGCAGCTAAGGCTGCTATGGATATCAATTGTCCAGAAGGTGCAAAGAAACTTGCGCAAAATACTGAAGCAGCTGTTGCCAAGAGAAAAAAGGAGAGGCAACTAGCTAGAGCAGCTGAAGCGAAAAACTCTACTCCAGCTCAGACTGCTGCAGAAGCTGTCCACCAAATGCTAACTAAGAAGAGACTCAGCTCAAAAATCAACTTTGATGTCCTGGAGAATATGTTCGAAACATCTGAGGCTCCTGATGTCTCCCAGAAAAGAAAATTTGATTCACATCTTGACAATGACGACAAGATGCCCCATGACAGTGAAGAGCTTGAATTTGATGCATACAAAGATGATGACTTGGGTATGGAACATGAATATGGGGATGAAGAAGGAATTGAAGGAACAGGCTTCAACAATTACGGTTATGTTGATGAAGTAGACGAGTACAATGATCGTGATTATGATGATTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006323 GO:0006325 GO:0006333 GO:0006996 GO:0007275 GO:0008150 GO:0009553 GO:0009561 GO:0009987 GO:0016043 GO:0016584 GO:0022607 GO:0031497 GO:0032501 GO:0032502 GO:0034728 GO:0040034 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044464 GO:0048229 GO:0048506 GO:0048509 GO:0048510 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051276 GO:0065007 GO:0071103 GO:0071824 GO:0071840 GO:0080134 GO:0080135 GO:1900034 GO:1900036

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DBINO HAND Helicase_C SLIDE SNF2_N

Protein Analysis

620

Amino Acids

69.75

Weight (kDa)

4.83

Isoelectric Point (pI)

42.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TFIIB	PF00382	69 - 158	6.3e-16	Transcription factor TFIIB repeat
TFIIB	PF00382	169 - 259	2.1e-17	Transcription factor TFIIB repeat
BRF1	PF07741	427 - 543	4.1e-25	Brf1-like TBP-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008488)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06400 AT3G06400 AT3G06400 AT5G18620 AT5G18620
fragaria_vesca	FvH4_4g17400 FvH4_4g17400
malus_domestica	MD13G1172500.v1.1 MD16G1173900.v1.1
prunus_persica	Prupe.1G140700_v2.0.a1 Prupe.1G140700_v2.0.a1 Prupe.1G140700_v2.0.a1
pyrus_communis	pycom13g14810
rosa_chinensis	RchiOBHm_Chr4g0421321
rosa_laevigata	RLG00000007697
rosa_multiflora	Rmu_sc0015713.1_g000006
rosa_roxburghii	Rroxscaffold_5G00363560
rosa_rugosa	Rorug04G0168900
rosa_samantha	Rh4AG230900 Rh4BG233900 Rh4CG245300 Rh4DG229500
rosa_wichuraiana	Rw4G020300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1455
AccBSI	CCGCTC	1 cut(s)	316
AccI	GTMKAC	2 cut(s)	55, 1827
AccIII	TCCGGA	1 cut(s)	68
AciI	CCGC	6 cut(s)	75, 131, 134, 316, 757, 1061
AclWI	GGATC	4 cut(s)	99, 512, 898, 1012
AcsI	RAATTY	4 cut(s)	319, 767, 1664, 1721
AcuI	CTGAAG	3 cut(s)	1269, 1485, 1536
AfaI	GTAC	6 cut(s)	13, 165, 351, 729, 1373, 1835
AfiI	CCNNNNNNNGG	1 cut(s)	817
AflIII	ACRYGT	1 cut(s)	730
AgsI	TTSAA	9 cut(s)	35, 427, 506, 767, 803, 1048, 1721, 1787, 1801
AjnI	CCWGG	4 cut(s)	170, 524, 556, 1611
AloI	GAACNNNNNNTCC	4 cut(s)	888, 920, 1607, 1639
Alw21I	GWGCWC	2 cut(s)	495, 704
Alw26I	GTCTC	5 cut(s)	255, 698, 1232, 1576, 1654
AlwI	GGATC	4 cut(s)	99, 512, 898, 1012
AlwNI	CAGNNNCTG	2 cut(s)	785, 1556
Aor13HI	TCCGGA	1 cut(s)	68
AoxI	GGCC	3 cut(s)	136, 331, 886
ApoI	RAATTY	4 cut(s)	319, 767, 1664, 1721
Asp700I	GAANNNNTTC	1 cut(s)	1622
AspLEI	GCGC	1 cut(s)	1456
AspS9I	GGNCC	2 cut(s)	136, 331
AsuII	TTCGAA	2 cut(s)	416, 1626
BauI	CACGAG	2 cut(s)	195, 812
Bbv12I	GWGCWC	2 cut(s)	495, 704
BccI	CCATC	2 cut(s)	875, 1202
BceAI	ACGGC	3 cut(s)	318, 437, 1321
BcgI	CGANNNNNNTGC	2 cut(s)	1079, 1113
BciT130I	CCWGG	4 cut(s)	172, 526, 558, 1613
BciVI	GTATCC	1 cut(s)	198
BclI	TGATCA	1 cut(s)	1123
BcoDI	GTCTC	5 cut(s)	255, 698, 1232, 1576, 1654
BfaI	CTAG	2 cut(s)	1502, 1506
BfmI	CTRYAG	1 cut(s)	1548
BfuI	GTATCC	1 cut(s)	198
Bme1390I	CCNGG	4 cut(s)	172, 526, 558, 1613
BmgT120I	GGNCC	2 cut(s)	136, 331
BmiI	GGNNCC	6 cut(s)	40, 111, 332, 451, 1197, 1641
BmrFI	CCNGG	4 cut(s)	172, 526, 558, 1613
BmrI	ACTGGG	1 cut(s)	639
BmsI	GCATC	8 cut(s)	37, 62, 615, 730, 1064, 1095, 1686, 1717
BmuI	ACTGGG	1 cut(s)	639
BpmI	CTGGAG	5 cut(s)	154, 999, 1316, 1518, 1634
Bpu10I	CCTNAGC	2 cut(s)	1392, 1407
Bpu14I	TTCGAA	2 cut(s)	416, 1626
BpuEI	CTTGAG	1 cut(s)	680
Bsa29I	ATCGAT	1 cut(s)	1089
BsaBI	GATNNNNATC	1 cut(s)	1674
BsaI	GGTCTC	2 cut(s)	698, 1232
BsaJI	CCNNGG	1 cut(s)	171
BsaWI	WCCGGW	2 cut(s)	68, 1241
BsaXI	ACNNNNNCTCC	2 cut(s)	1607, 1637
Bsc4I	CCNNNNNNNGG	1 cut(s)	817
Bse1I	ACTGG	2 cut(s)	645, 834
Bse3DI	GCAATG	2 cut(s)	369, 1095
Bse8I	GATNNNNATC	1 cut(s)	1674
BseAI	TCCGGA	1 cut(s)	68
BseBI	CCWGG	4 cut(s)	172, 526, 558, 1613
BseCI	ATCGAT	1 cut(s)	1089
BseDI	CCNNGG	1 cut(s)	171
BseGI	GGATG	5 cut(s)	77, 630, 838, 1130, 1777
BseJI	GATNNNNATC	1 cut(s)	1674
BseLI	CCNNNNNNNGG	1 cut(s)	817
BseMI	GCAATG	2 cut(s)	369, 1095
BseMII	CTCAG	7 cut(s)	96, 201, 470, 537, 1553, 1600, 1626
BseNI	ACTGG	2 cut(s)	645, 834
BseRI	GAGGAG	1 cut(s)	1394
BseYI	CCCAGC	1 cut(s)	445
BsgI	GTGCAG	1 cut(s)	573
BshFI	GGCC	3 cut(s)	138, 333, 888
BshVI	ATCGAT	1 cut(s)	1089
BsiHKAI	GWGCWC	2 cut(s)	495, 704
BsiSI	CCGG	2 cut(s)	69, 1242
BslI	CCNNNNNNNGG	1 cut(s)	817
BsmAI	GTCTC	5 cut(s)	255, 698, 1232, 1576, 1654
BsmI	GAATGC	1 cut(s)	133
BsnI	GGCC	3 cut(s)	138, 333, 888
Bso31I	GGTCTC	2 cut(s)	698, 1232
Bsp119I	TTCGAA	2 cut(s)	416, 1626
Bsp1286I	GDGCHC	2 cut(s)	495, 704
Bsp13I	TCCGGA	1 cut(s)	68
Bsp1407I	TGTACA	1 cut(s)	727
Bsp143I	GATC	7 cut(s)	91, 517, 903, 1004, 1123, 1291, 1840
BspACI	CCGC	6 cut(s)	75, 131, 134, 316, 757, 1061
BspANI	GGCC	3 cut(s)	138, 333, 888
BspCNI	CTCAG	7 cut(s)	97, 200, 471, 538, 1552, 1599, 1627
BspDI	ATCGAT	1 cut(s)	1089
BspEI	TCCGGA	1 cut(s)	68
BspLI	GGNNCC	6 cut(s)	40, 111, 332, 451, 1197, 1641
BspMAI	CTGCAG	1 cut(s)	1552
BspPI	GGATC	4 cut(s)	99, 512, 898, 1012
BspQI	GCTCTTC	1 cut(s)	1707
BspT104I	TTCGAA	2 cut(s)	416, 1626
BspTNI	GGTCTC	2 cut(s)	698, 1232
BsrBI	CCGCTC	1 cut(s)	316
BsrDI	GCAATG	2 cut(s)	369, 1095
BsrGI	TGTACA	1 cut(s)	727
BsrI	ACTGG	2 cut(s)	645, 834
BssECI	CCNNGG	1 cut(s)	171
BssMI	GATC	7 cut(s)	91, 517, 903, 1004, 1123, 1291, 1840
BssSI	CACGAG	2 cut(s)	195, 812
Bst2BI	CACGAG	2 cut(s)	195, 812
Bst2UI	CCWGG	4 cut(s)	172, 526, 558, 1613
Bst4CI	ACNGT	4 cut(s)	692, 1121, 1709, 1811
Bst6I	CTCTTC	4 cut(s)	798, 1317, 1574, 1707
BstAPI	GCANNNNNTGC	1 cut(s)	1475
BstAUI	TGTACA	1 cut(s)	727
BstBI	TTCGAA	2 cut(s)	416, 1626
BstC8I	GCNNGC	3 cut(s)	136, 1029, 1386
BstENI	CCTNNNNNAGG	1 cut(s)	815
BstF5I	GGATG	5 cut(s)	77, 630, 838, 1130, 1777
BstHHI	GCGC	1 cut(s)	1456
BstKTI	GATC	7 cut(s)	94, 520, 906, 1007, 1126, 1294, 1843
BstMAI	GTCTC	5 cut(s)	255, 698, 1232, 1576, 1654
BstMBI	GATC	7 cut(s)	91, 517, 903, 1004, 1123, 1291, 1840
BstMWI	GCNNNNNNNGC	9 cut(s)	490, 1195, 1409, 1412, 1475, 1511, 1517, 1544, 1553
BstNI	CCWGG	4 cut(s)	172, 526, 558, 1613
BstNSI	RCATGY	3 cut(s)	363, 378, 734
BstSCI	CCNGG	4 cut(s)	170, 524, 556, 1611
BstSFI	CTRYAG	1 cut(s)	1548
BstX2I	RGATCY	2 cut(s)	903, 1004
BstXI	CCANNNNNNTGG	1 cut(s)	152
BstYI	RGATCY	2 cut(s)	903, 1004
Bsu15I	ATCGAT	1 cut(s)	1089
BsuI	GTATCC	1 cut(s)	198
BsuRI	GGCC	3 cut(s)	138, 333, 888
BsuTUI	ATCGAT	1 cut(s)	1089
BtgZI	GCGATG	1 cut(s)	60
BtsCI	GGATG	5 cut(s)	77, 630, 838, 1130, 1777
BtsIMutI	CAGTG	3 cut(s)	652, 1126, 1714
Cac8I	GCNNGC	3 cut(s)	136, 1029, 1386
CaiI	CAGNNNCTG	2 cut(s)	785, 1556
CfoI	GCGC	1 cut(s)	1456
Cfr13I	GGNCC	2 cut(s)	136, 331
ClaI	ATCGAT	1 cut(s)	1089
Csp6I	GTAC	6 cut(s)	12, 164, 350, 728, 1372, 1834
CviAII	CATG	6 cut(s)	360, 375, 610, 731, 1703, 1760
CviQI	GTAC	6 cut(s)	12, 164, 350, 728, 1372, 1834
DpnI	GATC	7 cut(s)	93, 519, 905, 1006, 1125, 1293, 1842
DpnII	GATC	7 cut(s)	91, 517, 903, 1004, 1123, 1291, 1840
Eam1104I	CTCTTC	4 cut(s)	798, 1317, 1574, 1707
EarI	CTCTTC	4 cut(s)	798, 1317, 1574, 1707
Eco31I	GGTCTC	2 cut(s)	698, 1232
Eco32I	GATATC	1 cut(s)	1423
Eco57I	CTGAAG	3 cut(s)	1269, 1485, 1536
EcoNI	CCTNNNNNAGG	1 cut(s)	815
EcoRII	CCWGG	4 cut(s)	170, 524, 556, 1611
EcoRV	GATATC	1 cut(s)	1423
EcoT22I	ATGCAT	1 cut(s)	1732
FaeI	CATG	6 cut(s)	363, 378, 613, 734, 1706, 1763
FatI	CATG	6 cut(s)	359, 374, 609, 730, 1702, 1759
FauI	CCCGC	1 cut(s)	127
FbaI	TGATCA	1 cut(s)	1123
FblI	GTMKAC	2 cut(s)	55, 1827
FokI	GGATG	5 cut(s)	84, 637, 845, 1117, 1784
FspBI	CTAG	2 cut(s)	1502, 1506
FspI	TGCGCA	1 cut(s)	1455
GlaI	GCGC	1 cut(s)	1455
GsaI	CCCAGC	1 cut(s)	449
GsuI	CTGGAG	5 cut(s)	154, 999, 1316, 1518, 1634
HaeIII	GGCC	3 cut(s)	138, 333, 888
HapII	CCGG	2 cut(s)	69, 1242
HhaI	GCGC	1 cut(s)	1456
Hin1II	CATG	6 cut(s)	363, 378, 613, 734, 1706, 1763
Hin6I	GCGC	1 cut(s)	1454
HinP1I	GCGC	1 cut(s)	1454
HincII	GTYRAC	1 cut(s)	1303
HindII	GTYRAC	1 cut(s)	1303
HindIII	AAGCTT	1 cut(s)	1251
HinfI	GANTC	6 cut(s)	782, 1079, 1265, 1363, 1584, 1670
HpaII	CCGG	2 cut(s)	69, 1242
Hpy188I	TCNGA	9 cut(s)	106, 343, 480, 712, 1270, 1282, 1542, 1636, 1862
HpyAV	CCTTC	8 cut(s)	29, 531, 558, 811, 1322, 1430, 1772, 1781
HpyCH4III	ACNGT	4 cut(s)	692, 1121, 1709, 1811
HpyF10VI	GCNNNNNNNGC	9 cut(s)	490, 1195, 1409, 1412, 1475, 1511, 1517, 1544, 1553
Hsp92II	CATG	6 cut(s)	363, 378, 613, 734, 1706, 1763
HspAI	GCGC	1 cut(s)	1454
Kpn2I	TCCGGA	1 cut(s)	68
Ksp22I	TGATCA	1 cut(s)	1123
Kzo9I	GATC	7 cut(s)	91, 517, 903, 1004, 1123, 1291, 1840
LguI	GCTCTTC	1 cut(s)	1707
LmnI	GCTCC	8 cut(s)	173, 449, 707, 789, 1063, 1195, 1381, 1645
LweI	GCATC	8 cut(s)	37, 62, 615, 730, 1064, 1095, 1686, 1717
MaeI	CTAG	2 cut(s)	1502, 1506
MalI	GATC	7 cut(s)	93, 519, 905, 1006, 1125, 1293, 1842
MbiI	CCGCTC	1 cut(s)	316
MboI	GATC	7 cut(s)	91, 517, 903, 1004, 1123, 1291, 1840
MfeI	CAATTG	3 cut(s)	146, 498, 1426
MflI	RGATCY	2 cut(s)	903, 1004
MhlI	GDGCHC	2 cut(s)	495, 704
MlyI	GAGTC	3 cut(s)	1073, 1274, 1578
Mph1103I	ATGCAT	1 cut(s)	1732
MroI	TCCGGA	1 cut(s)	68
MroXI	GAANNNNTTC	1 cut(s)	1622
MseI	TTAA	4 cut(s)	123, 839, 1068, 1317
MslI	CAYNNNNRTG	4 cut(s)	608, 735, 1707, 1764
MspA1I	CMGCKG	3 cut(s)	1232, 1472, 1514
MspI	CCGG	2 cut(s)	69, 1242
MspR9I	CCNGG	4 cut(s)	172, 526, 558, 1613
MunI	CAATTG	3 cut(s)	146, 498, 1426
Mva1269I	GAATGC	1 cut(s)	133
MvaI	CCWGG	4 cut(s)	172, 526, 558, 1613
MwoI	GCNNNNNNNGC	9 cut(s)	490, 1195, 1409, 1412, 1475, 1511, 1517, 1544, 1553
NdeII	GATC	7 cut(s)	91, 517, 903, 1004, 1123, 1291, 1840
NlaIII	CATG	6 cut(s)	363, 378, 613, 734, 1706, 1763
NlaIV	GGNNCC	6 cut(s)	40, 111, 332, 451, 1197, 1641
NsbI	TGCGCA	1 cut(s)	1455
NsiI	ATGCAT	1 cut(s)	1732
NspI	RCATGY	3 cut(s)	363, 378, 734
NspV	TTCGAA	2 cut(s)	416, 1626
PciI	ACATGT	1 cut(s)	730
PciSI	GCTCTTC	1 cut(s)	1707
PcsI	WCGNNNNNNNCGW	1 cut(s)	216
PctI	GAATGC	1 cut(s)	133
PdmI	GAANNNNTTC	1 cut(s)	1622
PfeI	GAWTC	3 cut(s)	782, 1363, 1670
PflFI	GACNNNGTC	1 cut(s)	951
PfoI	TCCNGGA	1 cut(s)	1611
PleI	GAGTC	3 cut(s)	1073, 1273, 1578
PpsI	GAGTC	3 cut(s)	1073, 1273, 1578
PscI	ACATGT	1 cut(s)	730
Psp6I	CCWGG	4 cut(s)	170, 524, 556, 1611
PspFI	CCCAGC	1 cut(s)	445
PspGI	CCWGG	4 cut(s)	170, 524, 556, 1611
PspN4I	GGNNCC	6 cut(s)	40, 111, 332, 451, 1197, 1641
PspPI	GGNCC	2 cut(s)	136, 331
PstI	CTGCAG	1 cut(s)	1552
PstNI	CAGNNNCTG	2 cut(s)	785, 1556
PsuI	RGATCY	2 cut(s)	903, 1004
PsyI	GACNNNGTC	1 cut(s)	951
PvuII	CAGCTG	3 cut(s)	1232, 1472, 1514
RsaI	GTAC	6 cut(s)	13, 165, 351, 729, 1373, 1835
RsaNI	GTAC	6 cut(s)	12, 164, 350, 728, 1372, 1834
RseI	CAYNNNNRTG	4 cut(s)	608, 735, 1707, 1764
SapI	GCTCTTC	1 cut(s)	1707
SaqAI	TTAA	4 cut(s)	123, 839, 1068, 1317
Sau3AI	GATC	7 cut(s)	91, 517, 903, 1004, 1123, 1291, 1840
Sau96I	GGNCC	2 cut(s)	136, 331
SchI	GAGTC	3 cut(s)	1073, 1274, 1578
ScrFI	CCNGG	4 cut(s)	172, 526, 558, 1613
SduI	GDGCHC	2 cut(s)	495, 704
SfaNI	GCATC	8 cut(s)	37, 62, 615, 730, 1064, 1095, 1686, 1717
SfcI	CTRYAG	1 cut(s)	1548
SfuI	TTCGAA	2 cut(s)	416, 1626
SmiMI	CAYNNNNRTG	4 cut(s)	608, 735, 1707, 1764
SmlI	CTYRAG	1 cut(s)	695
SmoI	CTYRAG	1 cut(s)	695
SsiI	CCGC	6 cut(s)	75, 131, 134, 316, 757, 1061
SspMI	CTAG	2 cut(s)	1502, 1506
StyD4I	CCNGG	4 cut(s)	170, 524, 556, 1611
TaaI	ACNGT	4 cut(s)	692, 1121, 1709, 1811
TaqI	TCGA	4 cut(s)	210, 416, 1089, 1626
TatI	WGTACW	5 cut(s)	11, 349, 727, 1371, 1833
TauI	GCSGC	3 cut(s)	78, 134, 760
TfiI	GAWTC	3 cut(s)	782, 1363, 1670
Tru1I	TTAA	4 cut(s)	123, 839, 1068, 1317
Tru9I	TTAA	4 cut(s)	123, 839, 1068, 1317
TscAI	CASTG	3 cut(s)	652, 1126, 1714
TspGWI	ACGGA	1 cut(s)	1014
TspRI	CASTG	3 cut(s)	652, 1126, 1714
Tth111I	GACNNNGTC	1 cut(s)	951
XagI	CCTNNNNNAGG	1 cut(s)	815
XapI	RAATTY	4 cut(s)	319, 767, 1664, 1721
XceI	RCATGY	3 cut(s)	363, 378, 734
XmiI	GTMKAC	2 cut(s)	55, 1827
XmnI	GAANNNNTTC	1 cut(s)	1622
XspI	CTAG	2 cut(s)	1502, 1506
Zsp2I	ATGCAT	1 cut(s)	1732

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.