AT5G18620

chromatin-remodeling complex ATPase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0008488
Physical Location & Seq
Reverse (-)
6195689 .. 6202168
6480 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G18620.2

Sequence Viewer

Length: 3210 bp
ATGGCTAGAGCTTCGAAGCGGGAAGTTTCTTCAGACGAGGCTTACTCGTCGGAGGAAGAGGAGCAAGTTAACGATCAGGCCAATGTGGAAGAAGATGATGACGAGCTCGAGGCCGTCGCTCGCTCTGCGGGCTCTGACGAGGAAGATGTTGCGCCCGACGAAGCACCTGTCTCTGACGACGAGGTTGTCCCCGTAGAAGATGACGCTGAAGAGGACGAAGAAGACGAGGAGAAAGCTGAGATCAGCAAACGTGAGAAGGCTAGACTCAAAGAAATGCAGAAGATGAAGAAGCAGAAAATTCAGCAAATCTTAGACTCCCAAAATGCTTCCATAGATGCTGATATGAACAATAAAGGAAAGGGGAGGATAAAGTATCTTCTGCAGCAAACTGAGTTATTTGCACATTTTGCTAAAAGTGACCCGTCTCCGTCCCAGAAGAAGGGAAAAGGAAGGGGTCGCCATTCTTCCAAACTAACCGAGGAAGAGGAAGATGAAGAGTGTTTAAAAGAAGAAGAGGGTGGTATAGTTGGATCTGGAGGCACACGGTTGCTCACTCAGCCCGCTTGTATTCAGGGGAAGTTAAGAGATTACCAATTAGCTGGTTTAAACTGGCTCATTCGGCTGTATGAGAACGGCATAAATGGGATTCTTGCAGATGAAATGGGTCTGGGGAAGACGCTTCAAACCATTTCTTTGTTGGCTTACCTGCATGAGTACAGGGGAATTAATGGCCCTCATATGGTAGTTGCTCCAAAATCAACCCTTGGTAACTGGATGAATGAAATTCGCCGATTTTGTCCTGTCCTGCGTGCTGTGAAATTTCTCGGTAATCCCGAGGAAAGAAGACATATTCGTGAAGAACTGCTAGTTGCAGGGAAATTCGACATTTGTGTAACAAGCTTTGAGATGGCTATCAAAGAGAAGACAACATTGCGCCGTTTTAGCTGGCGATATATAATCATTGATGAAGCACATCGAATTAAAAATGAGAATTCACTCCTTTCGAAAACCATGAGACTTTTCAGCACCAACTATCGGCTTCTTATCACGGGAACCCCCCTTCAGAATAATCTCCATGAATTGTGGGCCCTTCTCAATTTTCTTCTCCCTGAGGTTTTTAGTTCAGCAGAAACTTTTGACGAGTGGTTTCAAATTTCTGGTGAAAACGACCAGCAAGAAGTTGTTCAACAACTTCACAAGGTTCTGCGACCATTTCTTCTTCGGAGGTTAAAATCAGATGTAGAGAAAGGCTTACCTCCAAAAAAGGAGACAATACTCAAAGTTGGCATGTCTCAAATGCAAAAACAGTACTACAAGGCTTTACTGCAGAAGGATCTTGAAGTGGTTAATGGTGGTGGAGAACGCAAACGTCTGTTGAACATAGCAATGCAATTGCGGAAATGCTGCAATCACCCTTATCTCTTCCAGGGTGCGGAGCCTGGTCCCCCATATACTACAGGAGATCACCTTGTAACAAACGCAGGTAAGATGGTTCTCTTAGATAAATTGCTACCTAAGTTGAAGGATCGAGATTCAAGGGTTCTGATATTTTCTCAGATGACAAGGCTTTTGGATATTCTCGAGGATTACCTAATGTATCGTGGTTACCAGTACTGCCGTATTGATGGAAATACTGGTGGTGACGAACGAGATGCTTCCATAGAAGCCTATAACAAGCCAGGAAGTGAGAAATTCGTTTTCTTGTTATCCACTAGAGCTGGAGGACTTGGTATCAATCTTGCTACTGCAGATGTTGTGATCCTCTATGATAGTGACTGGAACCCTCAAGTTGACTTGCAAGCTCAGGATCGTGCACATAGGATTGGTCAAAAAAAAGAAGTTCAAGTGTTCCGGTTCTGCACCGAGAATGCTATTGAGGCTAAAGTCATTGAGAGAGCTTACAAGAAGTTGGCACTTGATGCTCTGGTTATTCAGCAAGGGAGATTGGCAGAACAGAAAACTGTTAATAAGGATGAGTTGCTTCAAATGGTGAGATATGGTGCTGAAATGGTGTTTAGTTCTAAAGATAGCACAATTACGGATGAGGATATTGACAGAATCATTGCCAAAGGAGAAGAGGCAACGGCTGAACTTGATGCCAAGATGAAGAAATTTACTGAAGATGCAATACAGTTTAAAATGGATGACAGTGCTGACTTTTATGATTTTGACGATGACAACAAGGATGAGAGCAAGGTGGATTTTAAAAAGATTGTGAGTGAAAATTGGAATGATCCACCAAAAAGAGAGAGAAAGCGCAACTACTCTGAAGTTGAATACTTCAAGCAAACGTTGCGACAAGGTGCTCCAGCTAAACCTAAAGAGCCTAGAATTCCACGCATGCCCCAATTGCATGATTTTCAGTTCTTTAACATTCAGAGGCTGACTGAGCTGTATGAAAAAGAAGTGCGATACCTTATGCAAGCACATCAGAAAACTCAAATGAAAGACACAATTGAGGTTGATGAACCTGAAGAAGTTGGAGATCCCTTAACTGCTGAAGAAGTGGAAGAAAAGGAGCTATTGCTGGAAGAGGGTTTCTCAACATGGAGCAGAAGAGACTTCAATGCCTTCATTAGGGCTTGTGAGAAGTATGGCCGGAACGACATAAAGAGTATTGCCTCTGAGATGGAAGGGAAAACTGAGGAAGAGGTTGAACGATATGCTCAAGTTTTCCAAGTGCGATATAAAGAGCTGAATGATTACGACAGAATCATCAAGAATATTGAGAGAGGGGAAGCAAGAATCTCTAGGAAAGATGAAATCATGAAAGCTATTGGGAAGAAACTGGATCGCTACAGAAACCCGTGGCTGGAACTGAAGATTCAATATGGTCAGAACAAAGGGAAGCTGTACAATGAAGAGTGCGACCGTTTCATGATATGCATGGTCCATAAACTTGGGTATGGAAACTGGGATGAGCTAAAGGCAGCGTTTCGGACATCCCCCTTGTTTAGGTTTGACTGGTTTGTAAAATCCCGCACAACTCAGGAACTTGCAAGGAGATGTGACACACTAATCAGGTTGATTGAGAAAGAGAATCAAGAATTTGATGAGAGAGAGAGGCAAGCCCGAAAAGAGAAGAAGCTTTCAAAGAGTGCAACGCCATCAAAACGACCTTCGGGTAGGCAAGCAAATGAGAGCCCTTCATCTCTTCTGAAGAAACGAAAGCAGCTGTCAATGGATGATTATGGAAAGCGTAGGAAATAA

Protein Analysis

1069

Amino Acids

123.89

Weight (kDa)

5.7

Isoelectric Point (pI)

47.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ResIII PF04851 193 - 353 7.2e-11 Type III restriction enzyme, res subunit
SNF2-rel_dom PF00176 197 - 474 7.4e-101 SNF2-related domain
DEAD PF00270 214 - 354 6.9e-06 DEAD/DEAH box helicase
Helicase_C PF00271 496 - 609 2e-24 Helicase conserved C-terminal domain
HAND PF09110 759 - 835 1.1e-06 HAND
SLIDE PF09111 903 - 1013 4.9e-43 SLIDE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 185
Acc36I ACCTGC 2 cut(s) 714, 1472
AciI CCGC 6 cut(s) 19, 128, 561, 1396, 1433, 2980
AclI AACGTT 1 cut(s) 2291
AclWI GGATC 8 cut(s) 538, 1341, 1533, 1753, 1815, 2228, 2480, 2799
AcoI YGGCCR 1 cut(s) 2596
AcuI CTGAAG 9 cut(s) 15, 228, 1046, 2139, 2289, 2493, 2520, 2840, 3179
AfaI GTAC 4 cut(s) 716, 1310, 1613, 2855
AfiI CCNNNNNNNGG 7 cut(s) 439, 739, 1035, 1432, 2577, 2812, 2955
AjnI CCWGG 3 cut(s) 1425, 1438, 1678
Alw21I GWGCWC 3 cut(s) 108, 1816, 2308
Alw26I GTCTC 6 cut(s) 175, 429, 1009, 1262, 1296, 2553
Alw44I GTGCAC 1 cut(s) 1812
AlwI GGATC 8 cut(s) 538, 1341, 1533, 1753, 1815, 2228, 2480, 2799
AlwNI CAGNNNCTG 1 cut(s) 2383
Ama87I CYCGRG 3 cut(s) 107, 833, 1580
AoxI GGCC 5 cut(s) 78, 111, 730, 1086, 2596
ApaI GGGCCC 1 cut(s) 1090
ApaLI GTGCAC 1 cut(s) 1812
ApeKI GCWGC 4 cut(s) 382, 1404, 2930, 3172
ArsI GACNNNNNNTTYG 4 cut(s) 153, 185, 1552, 1584
AseI ATTAAT 1 cut(s) 726
Asp700I GAANNNNTTC 1 cut(s) 1182
AspLEI GCGC 3 cut(s) 154, 936, 2259
AspS9I GGNCC 5 cut(s) 731, 1086, 1087, 1442, 2890
AsuHPI GGTGA 5 cut(s) 1172, 1403, 1457, 1652, 2002
AsuII TTCGAA 2 cut(s) 14, 1004
AvaI CYCGRG 3 cut(s) 107, 833, 1580
AvaII GGWCC 2 cut(s) 1442, 2890
AxyI CCTNAGG 1 cut(s) 1110
BaeGI GKGCMC 2 cut(s) 1090, 1816
BanII GRGCYC 4 cut(s) 108, 134, 1090, 3146
BarI GAAGNNNNNNTAC 2 cut(s) 2112, 2144
BbsI GAAGAC 4 cut(s) 228, 680, 850, 929
Bbv12I GWGCWC 3 cut(s) 108, 1816, 2308
BbvI GCAGC 4 cut(s) 394, 1391, 2942, 3184
BccI CCATC 5 cut(s) 901, 1483, 1619, 2623, 3115
BceAI ACGGC 5 cut(s) 98, 649, 921, 1602, 2100
BcgI CGANNNNNNTGC 2 cut(s) 1634, 1668
BciT130I CCWGG 3 cut(s) 1427, 1440, 1680
BcoDI GTCTC 6 cut(s) 175, 429, 1009, 1262, 1296, 2553
BfaI CTAG 6 cut(s) 6, 261, 866, 1713, 2328, 2751
BfmI CTRYAG 5 cut(s) 380, 1325, 1455, 1746, 2797
BfuAI ACCTGC 2 cut(s) 714, 1472
BisI GCNGC 4 cut(s) 383, 1405, 2931, 3173
BlsI GCNGC 4 cut(s) 384, 1406, 2932, 3174
BmcAI AGTACT 2 cut(s) 1310, 1613
Bme1390I CCNGG 3 cut(s) 1427, 1440, 1680
Bme18I GGWCC 2 cut(s) 1442, 2890
BmeT110I CYCGRG 3 cut(s) 107, 833, 1580
BmgT120I GGNCC 5 cut(s) 731, 1086, 1087, 1442, 2890
BmiI GGNNCC 5 cut(s) 1054, 1088, 1437, 1444, 1781
BmrFI CCNGG 3 cut(s) 1427, 1440, 1680
BmrI ACTGGG 1 cut(s) 2923
BmsI GCATC 5 cut(s) 325, 1642, 1909, 2086, 2113
BmuI ACTGGG 1 cut(s) 2923
BpiI GAAGAC 4 cut(s) 228, 680, 850, 929
BplI GAGNNNNNCTC 4 cut(s) 29, 61, 2525, 2557
BpmI CTGGAG 3 cut(s) 555, 1740, 2292
Bpu10I CCTNAGC 1 cut(s) 1803
Bpu14I TTCGAA 2 cut(s) 14, 1004
BpuEI CTTGAG 2 cut(s) 1770, 2652
BsaBI GATNNNNATC 1 cut(s) 911
BsaJI CCNNGG 5 cut(s) 477, 763, 834, 1426, 2807
BsaWI WCCGGW 1 cut(s) 1851
Bsc4I CCNNNNNNNGG 7 cut(s) 439, 739, 1035, 1432, 2577, 2812, 2955
Bse1I ACTGG 8 cut(s) 614, 776, 1609, 1639, 1781, 2793, 2918, 2969
Bse21I CCTNAGG 1 cut(s) 1110
Bse3DI GCAATG 3 cut(s) 929, 1392, 2061
Bse8I GATNNNNATC 1 cut(s) 911
BseBI CCWGG 3 cut(s) 1427, 1440, 1680
BseDI CCNNGG 5 cut(s) 477, 763, 834, 1426, 2807
BseGI GGATG 8 cut(s) 780, 1978, 2047, 2149, 2191, 2923, 2942, 3190
BseJI GATNNNNATC 1 cut(s) 911
BseLI CCNNNNNNNGG 7 cut(s) 439, 739, 1035, 1432, 2577, 2812, 2955
BseMI GCAATG 3 cut(s) 929, 1392, 2061
BseNI ACTGG 8 cut(s) 614, 776, 1609, 1639, 1781, 2793, 2918, 2969
BseRI GAGGAG 2 cut(s) 74, 242
BseSI GKGCMC 2 cut(s) 1090, 1816
BseXI GCAGC 4 cut(s) 394, 1391, 2942, 3184
BsgI GTGCAG 1 cut(s) 1843
Bsh1285I CGRYCG 1 cut(s) 2872
BshFI GGCC 5 cut(s) 80, 113, 732, 1088, 2598
BsiEI CGRYCG 1 cut(s) 2872
BsiHKAI GWGCWC 3 cut(s) 108, 1816, 2308
BsiHKCI CYCGRG 3 cut(s) 107, 833, 1580
BsiSI CCGG 2 cut(s) 1852, 2599
BslFI GGGAC 3 cut(s) 173, 415, 1428
BslI CCNNNNNNNGG 7 cut(s) 439, 739, 1035, 1432, 2577, 2812, 2955
BsmAI GTCTC 6 cut(s) 175, 429, 1009, 1262, 1296, 2553
BsmBI CGTCTC 1 cut(s) 429
BsmFI GGGAC 3 cut(s) 173, 415, 1428
BsmI GAATGC 1 cut(s) 1873
BsnI GGCC 5 cut(s) 80, 113, 732, 1088, 2598
BsoBI CYCGRG 3 cut(s) 107, 833, 1580
Bsp119I TTCGAA 2 cut(s) 14, 1004
Bsp120I GGGCCC 1 cut(s) 1086
Bsp1286I GDGCHC 6 cut(s) 108, 134, 1090, 1816, 2308, 3146
Bsp1407I TGTACA 1 cut(s) 2853
BspACI CCGC 6 cut(s) 19, 128, 561, 1396, 1433, 2980
BspANI GGCC 5 cut(s) 80, 113, 732, 1088, 2598
BspHI TCATGA 2 cut(s) 2766, 2877
BspLI GGNNCC 5 cut(s) 1054, 1088, 1437, 1444, 1781
BspMAI CTGCAG 3 cut(s) 384, 1329, 1750
BspMI ACCTGC 2 cut(s) 714, 1472
BspPI GGATC 8 cut(s) 538, 1341, 1533, 1753, 1815, 2228, 2480, 2799
BspT104I TTCGAA 2 cut(s) 14, 1004
BsrDI GCAATG 3 cut(s) 929, 1392, 2061
BsrGI TGTACA 1 cut(s) 2853
BsrI ACTGG 8 cut(s) 614, 776, 1609, 1639, 1781, 2793, 2918, 2969
BssECI CCNNGG 5 cut(s) 477, 763, 834, 1426, 2807
BssT1I CCWWGG 1 cut(s) 763
Bst2UI CCWGG 3 cut(s) 1427, 1440, 1680
Bst4CI ACNGT 6 cut(s) 546, 1308, 1963, 2133, 2150, 2873
BstAPI GCANNNNNTGC 3 cut(s) 407, 1919, 2293
BstAUI TGTACA 1 cut(s) 2853
BstBI TTCGAA 2 cut(s) 14, 1004
BstDSI CCRYGG 1 cut(s) 2807
BstEII GGTNACC 1 cut(s) 1604
BstENI CCTNNNNNAGG 2 cut(s) 2575, 2953
BstF5I GGATG 8 cut(s) 780, 1978, 2047, 2149, 2191, 2923, 2942, 3190
BstHHI GCGC 3 cut(s) 154, 936, 2259
BstMAI GTCTC 6 cut(s) 175, 429, 1009, 1262, 1296, 2553
BstMCI CGRYCG 1 cut(s) 2872
BstNI CCWGG 3 cut(s) 1427, 1440, 1680
BstNSI RCATGY 2 cut(s) 1291, 2344
BstPI GGTNACC 1 cut(s) 1604
BstSCI CCNGG 3 cut(s) 1425, 1438, 1678
BstSFI CTRYAG 5 cut(s) 380, 1325, 1455, 1746, 2797
BstSLI GKGCMC 2 cut(s) 1090, 1816
BstV1I GCAGC 4 cut(s) 394, 1391, 2942, 3184
BstV2I GAAGAC 4 cut(s) 228, 680, 850, 929
BstX2I RGATCY 3 cut(s) 530, 1333, 2485
BstXI CCANNNNNNTGG 2 cut(s) 599, 2900
BstYI RGATCY 3 cut(s) 530, 1333, 2485
Bsu36I CCTNAGG 1 cut(s) 1110
BsuRI GGCC 5 cut(s) 80, 113, 732, 1088, 2598
BtgI CCRYGG 1 cut(s) 2807
BtsCI GGATG 8 cut(s) 780, 1978, 2047, 2149, 2191, 2923, 2942, 3190
BtsIMutI CAGTG 1 cut(s) 2155
BveI ACCTGC 2 cut(s) 714, 1472
CaiI CAGNNNCTG 1 cut(s) 2383
CciI TCATGA 2 cut(s) 2766, 2877
CfoI GCGC 3 cut(s) 154, 936, 2259
Cfr13I GGNCC 5 cut(s) 731, 1086, 1087, 1442, 2890
CseI GACGC 2 cut(s) 212, 685
Csp6I GTAC 4 cut(s) 715, 1309, 1612, 2854
CviQI GTAC 4 cut(s) 715, 1309, 1612, 2854
DraI TTTAAA 4 cut(s) 504, 606, 2137, 2206
DrdI GACNNNNNNGTC 1 cut(s) 185
DseDI GACNNNNNNGTC 1 cut(s) 185
EaeI YGGCCR 1 cut(s) 2596
Ecl136II GAGCTC 1 cut(s) 106
Eco130I CCWWGG 1 cut(s) 763
Eco24I GRGCYC 4 cut(s) 108, 134, 1090, 3146
Eco47I GGWCC 2 cut(s) 1442, 2890
Eco53kI GAGCTC 1 cut(s) 106
Eco57I CTGAAG 9 cut(s) 15, 228, 1046, 2139, 2289, 2493, 2520, 2840, 3179
Eco81I CCTNAGG 1 cut(s) 1110
Eco88I CYCGRG 3 cut(s) 107, 833, 1580
Eco91I GGTNACC 1 cut(s) 1604
EcoICRI GAGCTC 1 cut(s) 106
EcoNI CCTNNNNNAGG 2 cut(s) 2575, 2953
EcoO109I RGGNCCY 1 cut(s) 1087
EcoO65I GGTNACC 1 cut(s) 1604
EcoRI GAATTC 2 cut(s) 991, 2331
EcoRII CCWGG 3 cut(s) 1425, 1438, 1678
EcoT14I CCWWGG 1 cut(s) 763
EcoT22I ATGCAT 1 cut(s) 2888
EcoT38I GRGCYC 4 cut(s) 108, 134, 1090, 3146
ErhI CCWWGG 1 cut(s) 763
Esp3I CGTCTC 1 cut(s) 429
FaqI GGGAC 3 cut(s) 173, 415, 1428
FauI CCCGC 4 cut(s) 12, 121, 568, 2987
FauNDI CATATG 1 cut(s) 738
Fnu4HI GCNGC 4 cut(s) 383, 1405, 2931, 3173
FokI GGATG 8 cut(s) 787, 1985, 2054, 2156, 2198, 2929, 2930, 3197
FriOI GRGCYC 4 cut(s) 108, 134, 1090, 3146
Fsp4HI GCNGC 4 cut(s) 383, 1405, 2931, 3173
FspBI CTAG 6 cut(s) 6, 261, 866, 1713, 2328, 2751
GlaI GCGC 3 cut(s) 153, 935, 2258
GluI GCNGC 4 cut(s) 383, 1405, 2931, 3173
GsuI CTGGAG 3 cut(s) 555, 1740, 2292
HaeIII GGCC 5 cut(s) 80, 113, 732, 1088, 2598
HapII CCGG 2 cut(s) 1852, 2599
HgaI GACGC 2 cut(s) 212, 685
HhaI GCGC 3 cut(s) 154, 936, 2259
Hin6I GCGC 3 cut(s) 152, 934, 2257
HinP1I GCGC 3 cut(s) 152, 934, 2257
HincII GTYRAC 2 cut(s) 70, 1792
HindII GTYRAC 2 cut(s) 70, 1792
HindIII AAGCTT 2 cut(s) 898, 3086
HinfI GANTC 9 cut(s) 264, 314, 646, 1532, 2058, 2712, 2745, 2824, 3040
HpaI GTTAAC 1 cut(s) 70
HpaII CCGG 2 cut(s) 1852, 2599
HphI GGTGA 5 cut(s) 1172, 1403, 1457, 1652, 2002
Hpy166II GTNNAC 3 cut(s) 70, 1792, 1814
Hpy8I GTNNAC 3 cut(s) 70, 1792, 1814
Hpy99I CGWCG 4 cut(s) 52, 119, 161, 182
HpyCH4III ACNGT 6 cut(s) 546, 1308, 1963, 2133, 2150, 2873
HpyCH4IV ACGT 3 cut(s) 250, 1369, 2291
HpySE526I ACGT 3 cut(s) 250, 1369, 2291
HspAI GCGC 3 cut(s) 152, 934, 2257
KspAI GTTAAC 1 cut(s) 70
LmnI GCTCC 6 cut(s) 61, 754, 1435, 2311, 2518, 2550
Lsp1109I GCAGC 4 cut(s) 394, 1391, 2942, 3184
LweI GCATC 5 cut(s) 325, 1642, 1909, 2086, 2113
MaeI CTAG 6 cut(s) 6, 261, 866, 1713, 2328, 2751
MaeII ACGT 3 cut(s) 250, 1369, 2291
MaeIII GTNAC 8 cut(s) 416, 767, 892, 1471, 1604, 1640, 1772, 3008
MfeI CAATTG 3 cut(s) 1391, 2348, 2454
MflI RGATCY 3 cut(s) 530, 1333, 2485
MhlI GDGCHC 6 cut(s) 108, 134, 1090, 1816, 2308, 3146
MlyI GAGTC 2 cut(s) 258, 308
MmeI TCCRAC 3 cut(s) 30, 508, 2461
Mph1103I ATGCAT 1 cut(s) 2888
MroXI GAANNNNTTC 1 cut(s) 1182
MslI CAYNNNNRTG 2 cut(s) 852, 1385
MspA1I CMGCKG 1 cut(s) 3175
MspI CCGG 2 cut(s) 1852, 2599
MspR9I CCNGG 3 cut(s) 1427, 1440, 1680
MssI GTTTAAAC 1 cut(s) 606
MunI CAATTG 3 cut(s) 1391, 2348, 2454
Mva1269I GAATGC 1 cut(s) 1873
MvaI CCWGG 3 cut(s) 1427, 1440, 1680
NdeI CATATG 1 cut(s) 738
NlaIV GGNNCC 5 cut(s) 1054, 1088, 1437, 1444, 1781
NmuCI GTSAC 4 cut(s) 416, 1640, 1772, 3008
NsiI ATGCAT 1 cut(s) 2888
NspI RCATGY 2 cut(s) 1291, 2344
NspV TTCGAA 2 cut(s) 14, 1004
PaeI GCATGC 1 cut(s) 2344
PaeR7I CTCGAG 2 cut(s) 107, 1580
PagI TCATGA 2 cut(s) 2766, 2877
PcsI WCGNNNNNNNCGW 2 cut(s) 222, 831
PctI GAATGC 1 cut(s) 1873
PdmI GAANNNNTTC 1 cut(s) 1182
PfeI GAWTC 7 cut(s) 646, 1532, 2058, 2712, 2745, 2824, 3040
PkrI GCNGC 4 cut(s) 384, 1406, 2932, 3174
PleI GAGTC 2 cut(s) 258, 308
PmeI GTTTAAAC 1 cut(s) 606
PpsI GAGTC 2 cut(s) 258, 308
PshBI ATTAAT 1 cut(s) 726
Psp124BI GAGCTC 1 cut(s) 108
Psp1406I AACGTT 1 cut(s) 2291
Psp6I CCWGG 3 cut(s) 1425, 1438, 1678
PspEI GGTNACC 1 cut(s) 1604
PspGI CCWGG 3 cut(s) 1425, 1438, 1678
PspN4I GGNNCC 5 cut(s) 1054, 1088, 1437, 1444, 1781
PspOMI GGGCCC 1 cut(s) 1086
PspPI GGNCC 5 cut(s) 731, 1086, 1087, 1442, 2890
PspXI VCTCGAGB 1 cut(s) 107
PstI CTGCAG 3 cut(s) 384, 1329, 1750
PstNI CAGNNNCTG 1 cut(s) 2383
PsuI RGATCY 3 cut(s) 530, 1333, 2485
PvuII CAGCTG 1 cut(s) 3175
RsaI GTAC 4 cut(s) 716, 1310, 1613, 2855
RsaNI GTAC 4 cut(s) 715, 1309, 1612, 2854
RseI CAYNNNNRTG 2 cut(s) 852, 1385
SacI GAGCTC 1 cut(s) 108
SatI GCNGC 4 cut(s) 383, 1405, 2931, 3173
Sau96I GGNCC 5 cut(s) 731, 1086, 1087, 1442, 2890
ScaI AGTACT 2 cut(s) 1310, 1613
SchI GAGTC 2 cut(s) 258, 308
ScrFI CCNGG 3 cut(s) 1427, 1440, 1680
SduI GDGCHC 6 cut(s) 108, 134, 1090, 1816, 2308, 3146
SfaNI GCATC 5 cut(s) 325, 1642, 1909, 2086, 2113
SfcI CTRYAG 5 cut(s) 380, 1325, 1455, 1746, 2797
Sfr274I CTCGAG 2 cut(s) 107, 1580
SfuI TTCGAA 2 cut(s) 14, 1004
SinI GGWCC 2 cut(s) 1442, 2890
SlaI CTCGAG 2 cut(s) 107, 1580
SmiMI CAYNNNNRTG 2 cut(s) 852, 1385
SmlI CTYRAG 4 cut(s) 107, 1580, 1785, 2667
SmoI CTYRAG 4 cut(s) 107, 1580, 1785, 2667
SphI GCATGC 1 cut(s) 2344
SsiI CCGC 6 cut(s) 19, 128, 561, 1396, 1433, 2980
SspI AATATT 1 cut(s) 2725
SspMI CTAG 6 cut(s) 6, 261, 866, 1713, 2328, 2751
SstI GAGCTC 1 cut(s) 108
StyD4I CCNGG 3 cut(s) 1425, 1438, 1678
StyI CCWWGG 1 cut(s) 763
TaaI ACNGT 6 cut(s) 546, 1308, 1963, 2133, 2150, 2873
TaiI ACGT 3 cut(s) 253, 1372, 2294
TaqI TCGA 7 cut(s) 14, 108, 882, 976, 1004, 1528, 1581
TatI WGTACW 4 cut(s) 714, 1308, 1611, 2853
TfiI GAWTC 7 cut(s) 646, 1532, 2058, 2712, 2745, 2824, 3040
TscAI CASTG 1 cut(s) 2155
TseFI GTSAC 4 cut(s) 416, 1640, 1772, 3008
TseI GCWGC 4 cut(s) 382, 1404, 2930, 3172
Tsp45I GTSAC 4 cut(s) 416, 1640, 1772, 3008
TspGWI ACGGA 2 cut(s) 417, 2054
TspRI CASTG 1 cut(s) 2155
VneI GTGCAC 1 cut(s) 1812
VpaK11BI GGWCC 2 cut(s) 1442, 2890
VspI ATTAAT 1 cut(s) 726
XagI CCTNNNNNAGG 2 cut(s) 2575, 2953
XceI RCATGY 2 cut(s) 1291, 2344
XcmI CCANNNNNNNNNTGG 1 cut(s) 694
XhoI CTCGAG 2 cut(s) 107, 1580
XmnI GAANNNNTTC 1 cut(s) 1182
XspI CTAG 6 cut(s) 6, 261, 866, 1713, 2328, 2751
ZrmI AGTACT 2 cut(s) 1310, 1613
Zsp2I ATGCAT 1 cut(s) 2888
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.